Pregenerated sensors for MCOLN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011008Ensembl transcript IDs: ENSMUST00000011152.14, ENSMUST00000098524.5, ENSMUST00000170972.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCATGTGTCCAGTCCAGGGAGAGCTCACCTGAGGGGACAGCCAGGTaGTCTTTCATCCCGCTGACTGTGCTAACAGACACTGGTGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: SCVQSRESSPEGTAR*SFIPLTVLTDTGVV Trigger: CACAACACCAGTGTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGTCCCCTCAGGTGAGCTCTCCCTGGACTGGACACATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR GCA 90 bp | CAACATTATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTaGCACGCTGGCCTCACAAGAGGCTTACTCTTCACACTCCATGTC | + |
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Preference number: 1 (lower is better) Translates to: QHYDVTNDQTPGEFH*HAGLTRGLLFTLHV Trigger: GACATGGAGTGTGAAGAGTAAGCCTCTTGTGAGGCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCATAATGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR CCA 90 bp | TCTATGAAAAGTAACTTTGGAATGTCAGGTCTGATCAGCAGCTCATaGACACCCCTCCTTCTGGTTCCACAATTCAGCAGGACAATCTTT | + |
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Preference number: 1 (lower is better) Translates to: SMKSNFGMSGLISSS*TPLLLVPQFSRTIF Trigger: AAAGATTGTCCTGCTGAATTGTGGAACCAGAAGGAGGGGTGTCCATGAGCTGCTGATCAGACCTGACATTCCAAAGTTACTTTTCATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR CCA 90 bp | TCACCTGAGGGGACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACCTGATCAGCAGCTCATaGACACCCCTCCTTCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: SPEGTARCSFIPLTVLTDLISSS*TPLLLV Trigger: AACCAGAAGGAGGGGTGTCCATGAGCTGCTGATCAG...GTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGTCCCCTCAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR CCA 90 bp | ATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCCTCACTGATCAGCAGCTCATaGACACCCCTCCTTCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: MMSQTTRLLVNFIATLASLISSS*TPLLLV Trigger: AACCAGAAGGAGGGGTGTCCATGAGCTGCTGATCAG...TGAGGCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR TCA 90 bp | CTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGTGGGGTCTCTCTGAATaGCCTCAGCATAAAGGGATC | + |
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Preference number: 2 (lower is better) Translates to: LTDTGVVLAEEASSQSNQWGLSE*PQHKGI Trigger: GATCCCTTTATGCTGAGGTCATTCAGAGAGACCCCA...CTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR TCA 90 bp | CTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGAAAGGGATCTGGACTTaGCTGACATCAGCCAAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LTDTGVVLAEEASSQSNQKGIWT*LTSAKG Trigger: ACCTTTGGCTGATGTCAGTCAAGTCCAGATCCCTTT...CTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACACTGGTGTTGTGTACATCTCAACATTATaGTGTCACAAACGACCAGAC | + |
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Preference number: 2 (lower is better) Translates to: TARCSFIPLTVLTDTGVVYISTL*CHKRPD Trigger: GTCTGGTCGTTTGTGACATCATAATGTTGAGATGTA...CACAACACCAGTGTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR TCA 90 bp | AATGAAAAATCTACACTTCCTTCCATGACAAGGGCAAATCCCCACCACAATGGATGGGGTCTCTCTGAATaGCCTCAGCATAAAGGGATC | + |
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Preference number: 2 (lower is better) Translates to: NEKSTLPSMTRANPHHNGWGLSE*PQHKGI Trigger: GATCCCTTTATGCTGAGGTCATTCAGAGAGACCCCA...TCCATTGTGGTGGGGATTTGCCCTTGTCATGGAAGGAAGTGTAGATTTTTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR TCA 90 bp | CTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGCACACTCCATGTCTATaGAAAGTAACTTTGGAATGT | + |
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Preference number: 2 (lower is better) Translates to: LTDTGVVLAEEASSQSNQHTPCL*KVTLEC Trigger: ACATTCCAAAGTTACTTTTCATAGACATGGAGTGTG...CTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR TCA 90 bp | CTGACTGTGCTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGCACACTCCATGTCTATaGAAAGTAACTTTGGAATGT | + |
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Preference number: 2 (lower is better) Translates to: LTVLTDTGVVLAEEASSQHTPCL*KVTLEC Trigger: ACATTCCAAAGTTACTTTTCATAGACATGGAGTGTG...CTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAGCACAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR GCA 90 bp | CTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGTCTGGGTTTAAATATTaGTTACACACTCTGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LTDTGVVLAEEASSQSNQSGFKY*LHTLKW Trigger: CCACTTCAGAGTGTGTAAGCAATATTTAAACCCAGA...CTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR TCA 90 bp | CACTCTCTAGCTTCAAGTCTTAATTTGGTTTGGAAGCAAATTTATTTCTGTGCACGACCAGACTCCTGGTaGATTTCATTGCCACGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HSLASSLNLVWKQIYFCARPDSW*ISLPRW Trigger: CCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCG...TGCACAGAAATAAATTTGCTTCCAAACCAAATTAAGACTTGAAGCTAGAGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR TCA 72 bp | TCACTCATCATGTGTCCAGTCCAGGGAGAGCTCACCTaGGGGGACAGCCAGGTGCTCTTTCATCCCGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: SLIMCPVQGELT*GDSQVLFHPAD Trigger: GTCAGCGGGATGAAAGAGCACCTGGCTGTCCCCTCAGGTGAGCTCTCCCTGGACTGGACACATGATGAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR TCA 72 bp | CCTCCTTCTGGTTCCACAATTCAGCAGGACAATCTTTaGGCCGACTGCTGCTACCTCTGGGGTCTCTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: PPSGSTIQQDNL*ADCCYLWGLSE Trigger: TTCAGAGAGACCCCAGAGGTAGCAGCAGTCGGCTCAAAGATTGTCCTGCTGAATTGTGGAACCAGAAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR TCA 72 bp | GCTGACTGTGCTAACAGACACTGGTGTTGTGCTTGCTaGAGAAGCAAGCTCACAGTCCAACCAGTCACGAAC | + |
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Preference number: 3 (lower is better) Translates to: ADCANRHWCCAC*RSKLTVQPVTN Trigger: GTTCGTGACTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAGCACAGTCAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR TCA 72 bp | TTCCATGACAAGGGCAAATCCCCACCACAATGGAGCTaGCTTGTGAAACAGATGGCCACTCCAAGCTTAGGG | + |
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Preference number: 3 (lower is better) Translates to: FHDKGKSPPQWS*LVKQMATPSLG Trigger: CCCTAAGCTTGGAGTGGCCATCTGTTTCACAAGTCAGCTCCATTGTGGTGGGGATTTGCCCTTGTCATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR CAA 90 bp | ACATCTCAACATTATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGCTCAGCAGGACAATCTTaGAGCCGACTGCTGCTACCT | + |
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Preference number: 3 (lower is better) Translates to: TSQHYDVTNDQTPGEFHCSAGQS*SRLLLP Trigger: AGGTAGCAGCAGTCGGCTCAAAGATTGTCCTGCTGA...GCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCATAATGTTGAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| 3UTR-3UTR CAA 90 bp | CACTCTCTAGCTTCAAGTCTTAATTTGGTTTGGAAGCAAATTTATTTCTGTGCATCAGCAGGACAATCTTaGAGCCGACTGCTGCTACCT | + |
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Preference number: 3 (lower is better) Translates to: HSLASSLNLVWKQIYFCASAGQS*SRLLLP Trigger: AGGTAGCAGCAGTCGGCTCAAAGATTGTCCTGCTGA...TGCACAGAAATAAATTTGCTTCCAAACCAAATTAAGACTTGAAGCTAGAGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | TCACCTGAGGGGACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACGGACGTACCATCCGTTaGCGAATTCCCACTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SPEGTARCSFIPLTVLTDGRTIR*RIPTGQ Trigger: CTGACCAGTGGGAATTCGTCAACGGATGGTACGTCC...GTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGTCCCCTCAGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | CTGACTGTGCTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGCCTCGGGTTCCGTGGTaGGCACCTGAAGGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LTVLTDTGVVLAEEASSQPRVPW*APEGPG Trigger: ACCTGGACCTTCAGGTGCTCACCACGGAACCCGAGG...CTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAGCACAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | CTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGCCTCGGGTTCCGTGGTaGGCACCTGAAGGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LTDTGVVLAEEASSQSNQPRVPW*APEGPG Trigger: ACCTGGACCTTCAGGTGCTCACCACGGAACCCGAGG...CTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR CCA 90 bp | CATTGCCACGCTGGCCTCACAAGAGGCTTACTCTTCACACTCCATGTCTATGAAGCCATCGCAGATCTGTaGTGGGGACCCCAAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: HCHAGLTRGLLFTLHVYEAIADL*WGPQVR Trigger: CCTGACTTGGGGTCCCCACCACAGATCTGCGATGGC...TTCATAGACATGGAGTGTGAAGAGTAAGCCTCTTGTGAGGCCAGCGTGGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011152.14 |
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| CDS-3UTR TCA 90 bp | TTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGTCACGAACTGAGTGGCAGTTTCCACGGGATCTaGCGTCTGGCTCGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: LCLLKKQAHSPTSHELSGSFHGI*RLARYF Trigger: GAAGTACCGAGCCAGACGTCAGATCCCGTGGAAACT...GCCACTCAGTTCGTGACTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR GCA 90 bp | TCACCTGAGGGGACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACGCACAGGATAAGGGATaGCAGGCAGATCATAATGAC | + |
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Preference number: 4 (lower is better) Translates to: SPEGTARCSFIPLTVLTDAQDKG*QADHND Trigger: GTCATTATGATCTGCCTGGCATCCCTTATCCTGTGC...GTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGTCCCCTCAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | TCACCTGAGGGGACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACTCTCACAGGGACTCATaGAGTAGAACTTCAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SPEGTARCSFIPLTVLTDSHRDS*SRTSGL Trigger: AAGACCTGAAGTTCTACTTCATGAGTCCCTGTGAGA...GTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGTCCCCTCAGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | TCACCTGAGGGGACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACGATAAAAATCCAGCCTaGAGAAAGATGTCTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SPEGTARCSFIPLTVLTDDKNPA*RKMSVP Trigger: GGGCACAGACATCTTTCTTCAGGCTGGATTTTTATC...GTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGTCCCCTCAGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | CTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGGGACGTACCATCCGTTaGCGAATTCCCACTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LTDTGVVLAEEASSQSNQGRTIR*RIPTGQ Trigger: CTGACCAGTGGGAATTCGTCAACGGATGGTACGTCC...CTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | CTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGTCACGAACTGAGTGGCTTACCCTCTTCTGCTGGATCTaGGCGAACGTGGCAAACATG | + |
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Preference number: 4 (lower is better) Translates to: LAEEASSQSNQSRTEWLTLFCWI*ANVANM Trigger: CATGTTTGCCACGTTCGCTCAGATCCAGCAGAAGAG...GGTAAGCCACTCAGTTCGTGACTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR GCA 90 bp | TTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGTCACGAACTGAGTGGCGAAGAAAGATGTCTGTaGCCAGTCCTCGGGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: LCLLKKQAHSPTSHELSGEERCL*PVLGFR Trigger: ACGGAACCCGAGGACTGGGCACAGACATCTTTCTTC...GCCACTCAGTTCGTGACTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR GCA 90 bp | GACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCCTCACAAGAGGCTTACTCACAGCCACACCAGAATaGTCTTCTGCTGGATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: DQTPGEFHCHAGLTRGLLTATPE*SSAGSE Trigger: CTCAGATCCAGCAGAAGAGCATTCTGGTGTGGCTGT...GAGTAAGCCTCTTGTGAGGCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR GCA 90 bp | TCACCTGAGGGGACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACTCAGGAAACCCATGCTaGTGGTACTTCTTAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: SPEGTARCSFIPLTVLTDSGNPC*WYFLMV Trigger: CACCATTAAGAAGTACCAGCAGCATGGGTTTCCTGA...GTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGTCCCCTCAGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | TCACCTGAGGGGACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACGTAGGTCAATTCCTTTaGGGGCAAAGGAGATATCAA | + |
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Preference number: 4 (lower is better) Translates to: SPEGTARCSFIPLTVLTDVGQFL*GQRRYQ Trigger: TTGATATCTCCTTTGCCCTCAAAGGAATTGACCTAC...GTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGTCCCCTCAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR GCA 90 bp | CATTGCCACGCTGGCCTCACAAGAGGCTTACTCTTCACACTCCATGTCTATGAAGAAGAAAGATGTCTGTaGCCAGTCCTCGGGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: HCHAGLTRGLLFTLHVYEEERCL*PVLGFR Trigger: ACGGAACCCGAGGACTGGGCACAGACATCTTTCTTC...TTCATAGACATGGAGTGTGAAGAGTAAGCCTCTTGTGAGGCCAGCGTGGCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR CCA 90 bp | CTGACTGTGCTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGAGAACCGGAGAACTTTaGGCAGTGAGGCTTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LTVLTDTGVVLAEEASSQRTGEL*AVRLAW Trigger: CCATGCAAGCCTCACTGCCCAAAGTTCTCCGGTTCT...CTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAGCACAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR CCA 90 bp | CATTGCCACGCTGGCCTCACAAGAGGCTTACTCTTCACACTCCATGTCTATGAAGGATCTGAGCGAACGTaGCAAACATGTCATCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: HCHAGLTRGLLFTLHVYEGSERT*QTCHRR Trigger: ACGGCGATGACATGTTTGCCACGTTCGCTCAGATCC...TTCATAGACATGGAGTGTGAAGAGTAAGCCTCTTGTGAGGCCAGCGTGGCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | ACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACACTGGTGTTGTGTCTCACAGGGACTCATaGAGTAGAACTTCAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TARCSFIPLTVLTDTGVVSHRDS*SRTSGL Trigger: AAGACCTGAAGTTCTACTTCATGAGTCCCTGTGAGA...CACAACACCAGTGTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | GACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCCTCACAAGAGGCTTACTCCAGTGTTATCTTCTTTaGAAGCCACCACCAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: DQTPGEFHCHAGLTRGLLQCYLL*KPPPTG Trigger: ACCAGTTGGTGGTGGCTTTCAAAGAAGATAACACTG...GAGTAAGCCTCTTGTGAGGCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | CTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGTCACGAACTGAGTGGCTTACCACATGTCATCGCCGTTaGCCAGAGAAAACAGGCATT | + |
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Preference number: 4 (lower is better) Translates to: LAEEASSQSNQSRTEWLTTCHRR*PEKTGI Trigger: AATGCCTGTTTTCTCTGGTCAACGGCGATGACATGT...GGTAAGCCACTCAGTTCGTGACTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR GCA 90 bp | ACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACACTGGTGTTGTGACTATCTTCAATATCTaGAAGCCCAGTTTCCACGGG | + |
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Preference number: 4 (lower is better) Translates to: TARCSFIPLTVLTDTGVVTIFNI*KPSFHG Trigger: CCCGTGGAAACTGGGCTTGCAGATATTGAAGATAGT...CACAACACCAGTGTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR GCA 90 bp | TTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGTCACGAACTGAGTGGCTTGGGCAGTGAGGCTTaGATGGTTAAAATGAGCACG | + |
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Preference number: 4 (lower is better) Translates to: LCLLKKQAHSPTSHELSGLGSEA*MVKMST Trigger: CGTGCTCATTTTAACCATGCAAGCCTCACTGCCCAA...GCCACTCAGTTCGTGACTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR GCA 90 bp | GACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCCTCACAAGAGGCTTACTCTCAGGAAACCCATGCTaGTGGTACTTCTTAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: DQTPGEFHCHAGLTRGLLSGNPC*WYFLMV Trigger: CACCATTAAGAAGTACCAGCAGCATGGGTTTCCTGA...GAGTAAGCCTCTTGTGAGGCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR GCA 90 bp | ACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACACTGGTGTTGTGGAATCAAGTGGTCATTaGTTCTTCTCCTCCTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TARCSFIPLTVLTDTGVVESSGH*FFSSSD Trigger: GTCTGAGGAGGAGAAGAAGCAATGACCACTTGATTC...CACAACACCAGTGTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR TCA 90 bp | TTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGTCACGAACTGAGTGGCGATAAAAATCCAGCCTaGAGAAAGATGTCTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLLKKQAHSPTSHELSGDKNPA*RKMSVP Trigger: GGGCACAGACATCTTTCTTCAGGCTGGATTTTTATC...GCCACTCAGTTCGTGACTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR GCA 90 bp | CTGACTGTGCTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGGCACAGGATAAGGGATaGCAGGCAGATCATAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTVLTDTGVVLAEEASSQAQDKG*QADHND Trigger: GTCATTATGATCTGCCTGGCATCCCTTATCCTGTGC...CTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAGCACAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR GCA 90 bp | CATTATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCACAGCCACACCAGAATaGTCTTCTGCTGGATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HYDVTNDQTPGEFHCHAGTATPE*SSAGSE Trigger: CTCAGATCCAGCAGAAGAGCATTCTGGTGTGGCTGT...GCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCATAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR TCA 90 bp | CTGGCCTCACAAGAGGCTTACTCTTCACACTCCATGTCTATGAAAAGTAACTTTAGTTTCCACGGGATCTaGCGTCTGGCTCGGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LASQEAYSSHSMSMKSNFSFHGI*RLARYF Trigger: GAAGTACCGAGCCAGACGTCAGATCCCGTGGAAACT...AAAGTTACTTTTCATAGACATGGAGTGTGAAGAGTAAGCCTCTTGTGAGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR GCA 90 bp | CTGACTGTGCTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGACTATCTTCAATATCTaGAAGCCCAGTTTCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTVLTDTGVVLAEEASSQTIFNI*KPSFHG Trigger: CCCGTGGAAACTGGGCTTGCAGATATTGAAGATAGT...CTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAGCACAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR GCA 90 bp | ACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACACTGGTGTTGTGTCTCCTGAGTGTATATaGTACAGCTGTAGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TARCSFIPLTVLTDTGVVSPECI*YSCSHL Trigger: AAGATGACTACAGCTGTAGCATATACACTCAGGAGA...CACAACACCAGTGTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR GCA 90 bp | GACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCCTCACAAGAGGCTTACTCTCTCCTGAGTGTATATaGTACAGCTGTAGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DQTPGEFHCHAGLTRGLLSPECI*YSCSHL Trigger: AAGATGACTACAGCTGTAGCATATACACTCAGGAGA...GAGTAAGCCTCTTGTGAGGCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR TCA 90 bp | ATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCCTCAGCTGTGTGGTTACCATaGCTATCTTCAATATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MMSQTTRLLVNFIATLASAVWLP*LSSISA Trigger: TGCAGATATTGAAGATAGTCATGGTAACCACACAGC...TGAGGCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR TCA 90 bp | AATGAAAAATCTACACTTCCTTCCATGACAAGGGCAAATCCCCACCACAATGGACTCTTCTGCTGGATCTaGGCGAACGTGGCAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: NEKSTLPSMTRANPHHNGLFCWI*ANVANM Trigger: CATGTTTGCCACGTTCGCTCAGATCCAGCAGAAGAG...TCCATTGTGGTGGGGATTTGCCCTTGTCATGGAAGGAAGTGTAGATTTTTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CCA 90 bp | AATGAAAAATCTACACTTCCTTCCATGACAAGGGCAAATCCCCACCACAATGGAAGAACCGGAGAACTTTaGGCAGTGAGGCTTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NEKSTLPSMTRANPHHNGRTGEL*AVRLAW Trigger: CCATGCAAGCCTCACTGCCCAAAGTTCTCCGGTTCT...TCCATTGTGGTGGGGATTTGCCCTTGTCATGGAAGGAAGTGTAGATTTTTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGTCACGAACTGAGTGGCTTACCTCAATGAGAATCAAGTaGTCATTGCTTCTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAEEASSQSNQSRTEWLTSMRIK*SLLLLL Trigger: GAGGAGAAGAAGCAATGACCACTTGATTCTCATTGA...GGTAAGCCACTCAGTTCGTGACTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR TCA 90 bp | CATTATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCGTAGGTCAATTCCTTTaGGGGCAAAGGAGATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HYDVTNDQTPGEFHCHAGVGQFL*GQRRYQ Trigger: TTGATATCTCCTTTGCCCTCAAAGGAATTGACCTAC...GCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR GCA 90 bp | CATTATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCTCCATAACCAAGGGTTaGCAGGGAAATATTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HYDVTNDQTPGEFHCHAGSITKG*QGNILQ Trigger: CTGAAGAATATTTCCCTGGCAACCCTTGGTTATGGA...GCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCATAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR GCA 90 bp | CATTATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCGTTTCAGGAAACCCATaGTGCTGGTACTTCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: HYDVTNDQTPGEFHCHAGVSGNP*CWYFLM Trigger: CATTAAGAAGTACCAGCAGCATGGGTTTCCTGAAAC...GCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCATAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CCA 90 bp | ACATCTCAACATTATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGCGGATCTGAGCGAACGTaGCAAACATGTCATCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TSQHYDVTNDQTPGEFHCGSERT*QTCHRR Trigger: ACGGCGATGACATGTTTGCCACGTTCGCTCAGATCC...GCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCATAATGTTGAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR TCA 90 bp | AATGAAAAATCTACACTTCCTTCCATGACAAGGGCAAATCCCCACCACAATGGAGGTATCTCTCGGGAATaGACTGCCTGTAGGTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: NEKSTLPSMTRANPHHNGGISRE*TACRSI Trigger: AATTGACCTACAGGCAGTTCATTCCCGAGAGATACC...TCCATTGTGGTGGGGATTTGCCCTTGTCATGGAAGGAAGTGTAGATTTTTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR TCA 90 bp | AATGAAAAATCTACACTTCCTTCCATGACAAGGGCAAATCCCCACCACAATGGAACATGTCATCGCCGTTaGCCAGAGAAAACAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NEKSTLPSMTRANPHHNGTCHRR*PEKTGI Trigger: AATGCCTGTTTTCTCTGGTCAACGGCGATGACATGT...TCCATTGTGGTGGGGATTTGCCCTTGTCATGGAAGGAAGTGTAGATTTTTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR TCA 90 bp | CTGGCCTCACAAGAGGCTTACTCTTCACACTCCATGTCTATGAAAAGTAACTTTCAGTGTTATCTTCTTTaGAAGCCACCACCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LASQEAYSSHSMSMKSNFQCYLL*KPPPTG Trigger: ACCAGTTGGTGGTGGCTTTCAAAGAAGATAACACTG...AAAGTTACTTTTCATAGACATGGAGTGTGAAGAGTAAGCCTCTTGTGAGGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR GCA 90 bp | AATGAAAAATCTACACTTCCTTCCATGACAAGGGCAAATCCCCACCACAATGGAGAATCAAGTGGTCATTaGTTCTTCTCCTCCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NEKSTLPSMTRANPHHNGESSGH*FFSSSD Trigger: GTCTGAGGAGGAGAAGAAGCAATGACCACTTGATTC...TCCATTGTGGTGGGGATTTGCCCTTGTCATGGAAGGAAGTGTAGATTTTTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR GCA 90 bp | AATGAAAAATCTACACTTCCTTCCATGACAAGGGCAAATCCCCACCACAATGGAGTTTCAGGAAACCCATaGTGCTGGTACTTCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: NEKSTLPSMTRANPHHNGVSGNP*CWYFLM Trigger: CATTAAGAAGTACCAGCAGCATGGGTTTCCTGAAAC...TCCATTGTGGTGGGGATTTGCCCTTGTCATGGAAGGAAGTGTAGATTTTTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR TCA 90 bp | TTACATCTCAACATTATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGGTATCTCTCGGGAATaGACTGCCTGTAGGTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LHLNIMMSQTTRLLVNFIGISRE*TACRSI Trigger: AATTGACCTACAGGCAGTTCATTCCCGAGAGATACC...AATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCATAATGTTGAGATGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR GCA 90 bp | CACTCTCTAGCTTCAAGTCTTAATTTGGTTTGGAAGCAAATTTATTTCTGTGCATTGGGCAGTGAGGCTTaGATGGTTAAAATGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: HSLASSLNLVWKQIYFCALGSEA*MVKMST Trigger: CGTGCTCATTTTAACCATGCAAGCCTCACTGCCCAA...TGCACAGAAATAAATTTGCTTCCAAACCAAATTAAGACTTGAAGCTAGAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CCA 90 bp | TTACATCTCAACATTATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTTCAATGAGAATCAAGTaGTCATTGCTTCTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHLNIMMSQTTRLLVNFISMRIK*SLLLLL Trigger: GAGGAGAAGAAGCAATGACCACTTGATTCTCATTGA...AATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCATAATGTTGAGATGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS GCA 90 bp | ACTGACCTCCTCAGACAGCAGAGGCAGGACAGCAAGGCCGATGGCTaGTTCTGGTACCCATCTTTGCTTCCGCTCTCCTTCAGGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TDLLRQQRQDSKADG*FWYPSLLPLSFRNF Trigger: GAAATTCCTGAAGGAGAGCGGAAGCAAAGATGGGTACCAGAAGCAGCCATCGGCCTTGCTGTCCTGCCTCTGCTGTCTGAGGAGGTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170972.2 |
||
| CDS CCA 90 bp | CTCCTCAGACAGCAGAGGCAGGACAGCAAGGCCGATGGCTGCTTCTaGTACCCATCTTTGCTTCCGCTCTCCTTCAGGAATTTCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLRQQRQDSKADGCF*YPSLLPLSFRNFCR Trigger: TCTGCAGAAATTCCTGAAGGAGAGCGGAAGCAAAGATGGGTACCAGAAGCAGCCATCGGCCTTGCTGTCCTGCCTCTGCTGTCTGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 ENSMUST00000170972.2 |
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| CDS CCA 90 bp | TCGCTGATAGTGACCAGGACGTACCATCCGTTGACGAATTCCCACTaGTCAGCGCCACACACGCGCTGTTTGTACTTCTCCAGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLIVTRTYHPLTNSH*SAPHTRCLYFSRKK Trigger: CTTCTTCCTGGAGAAGTACAAACAGCGCGTGTGTGGCGCTGACCAGTGGGAATTCGTCAACGGATGGTACGTCCTGGTCACTATCAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | ACGACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCCTCACAAGAGGCTTACCAGAACCGGAGAACTTaGGGCAGTGAGGCTTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TTRLLVNFIATLASQEAYQNRRT*GSEACM Trigger: CATGCAAGCCTCACTGCCCAAAGTTCTCCGGTTCTG...GTAAGCCTCTTGTGAGGCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS TCA 90 bp | TCCACGGGATCTGACGTCTGGCTCGGTACTTCTCACAGGGACTCATaGAGTAGAACTTCAGGTCTTCCCTCAGACACTCTTCCCTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: STGSDVWLGTSHRDS*SRTSGLPSDTLPSP Trigger: AGGTGAGGGAAGAGTGTCTGAGGGAAGACCTGAAGTTCTACTTCATGAGTCCCTGTGAGAAGTACCGAGCCAGACGTCAGATCCCGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | TCACCTGAGGGGACAGCCAGGTGCTCTTTCATCCCGCTGACTGTGCTAACAGACAACATGTCATCGCCGTaGACCAGAGAAAACAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPEGTARCSFIPLTVLTDNMSSP*TRENRH Trigger: ATGCCTGTTTTCTCTGGTCAACGGCGATGACATGTT...GTCTGTTAGCACAGTCAGCGGGATGAAAGAGCACCTGGCTGTCCCCTCAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS GCA 90 bp | AGAGGCAGGACAGCAAGGCCGATGGCTGCTTCTGGTACCCATCTTTaGTTCCGCTCTCCTTCAGGAATTTCTGCAGATCTGTTTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGRTARPMAASGTHL*FRSPSGISADLFQE Trigger: TTCCTGAAACAGATCTGCAGAAATTCCTGAAGGAGAGCGGAAGCAAAGATGGGTACCAGAAGCAGCCATCGGCCTTGCTGTCCTGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 ENSMUST00000170972.2 |
||
| CDS TCA 90 bp | CAACCATTTCCCACCACCGGCAGATTTCTGAGAGCAGAGTTCAGTTaGGATGACTGTCTTCCCTCCACAGACAACACTGACCTCCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QPFPTTGRFLRAEFS*DDCLPSTDNTDLLR Trigger: TCTGAGGAGGTCAGTGTTGTCTGTGGAGGGAAGACAGTCATCTCAACTGAACTCTGCTCTCAGAAATCTGCCGGTGGTGGGAAATGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170972.2 |
||
| CDS GCA 90 bp | CAGCCTCAGAGCAAGAACAATGGATCTCGTGCACAGGATAAGGGATaGCAGGCAGATCATAATGACGAACACATCAAACACCAGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QPQSKNNGSRAQDKG*QADHNDEHIKHQEV Trigger: TACCTCCTGGTGTTTGATGTGTTCGTCATTATGATCTGCCTGGCATCCCTTATCCTGTGCACGAGATCCATTGTTCTTGCTCTGAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | CTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGAACATGTCATCGCCGTaGACCAGAGAAAACAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LTDTGVVLAEEASSQSNQNMSSP*TRENRH Trigger: ATGCCTGTTTTCTCTGGTCAACGGCGATGACATGTT...CTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | CATTGCCACGCTGGCCTCACAAGAGGCTTACTCTTCACACTCCATGTCTATGAAACAGTGTTATCTTCTTaGAAAGCCACCACCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HCHAGLTRGLLFTLHVYETVLSS*KATTNW Trigger: CCAGTTGGTGGTGGCTTTCAAAGAAGATAACACTGT...TTCATAGACATGGAGTGTGAAGAGTAAGCCTCTTGTGAGGCCAGCGTGGCAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | ATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCCTCAAGAATCAAGTGGTCATaGCTTCTTCTCCTCCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: MMSQTTRLLVNFIATLASRIKWS*LLLLLR Trigger: TCTGAGGAGGAGAAGAAGCAATGACCACTTGATTCT...TGAGGCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS TCA 90 bp | AGTCCGGTATCTCTCGGGAATGAACTGCCTGTAGGTCAATTCCTTTaGGGGCAAAGGAGATATCAACTTGCACGAGCCGATAAAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPVSLGNELPVGQFL*GQRRYQLARADKNP Trigger: TGGATTTTTATCGGCTCGTGCAAGTTGATATCTCCTTTGCCCTCAAAGGAATTGACCTACAGGCAGTTCATTCCCGAGAGATACCGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | CTGGCCTCACAAGAGGCTTACTCTTCACACTCCATGTCTATGAAAAGTAACTTTAGGACGTACCATCCGTaGACGAATTCCCACTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LASQEAYSSHSMSMKSNFRTYHP*TNSHWS Trigger: TGACCAGTGGGAATTCGTCAACGGATGGTACGTCCT...AAAGTTACTTTTCATAGACATGGAGTGTGAAGAGTAAGCCTCTTGTGAGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | CATTATGATGTCACAAACGACCAGACTCCTGGTGAATTTCATTGCCACGCTGGCAGAATCAAGTGGTCATaGCTTCTTCTCCTCCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HYDVTNDQTPGEFHCHAGRIKWS*LLLLLR Trigger: TCTGAGGAGGAGAAGAAGCAATGACCACTTGATTCT...GCCAGCGTGGCAATGAAATTCACCAGGAGTCTGGTCGTTTGTGACATCATAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | CTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGTCCAACCAGAAAGGAGATATCAACTaGCACGAGCCGATAAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LTDTGVVLAEEASSQSNQKGDIN*HEPIKI Trigger: GATTTTTATCGGCTCGTGCAAGTTGATATCTCCTTT...CTGGTTGGACTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | CATTGCCACGCTGGCCTCACAAGAGGCTTACTCTTCACACTCCATGTCTATGAAAAAGGAGATATCAACTaGCACGAGCCGATAAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: HCHAGLTRGLLFTLHVYEKGDIN*HEPIKI Trigger: GATTTTTATCGGCTCGTGCAAGTTGATATCTCCTTT...TTCATAGACATGGAGTGTGAAGAGTAAGCCTCTTGTGAGGCCAGCGTGGCAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | CTGACTGTGCTAACAGACACTGGTGTTGTGCTTGCTGAAGAAGCAAGCTCACAGGTGAGCTTCTTGGCTTaGATTTCCATCTTCAATATG | + |
|
Preference number: 5 (lower is better) Translates to: LTVLTDTGVVLAEEASSQVSFLA*ISIFNM Trigger: CATATTGAAGATGGAAATCAAAGCCAAGAAGCTCAC...CTGTGAGCTTGCTTCTTCAGCAAGCACAACACCAGTGTCTGTTAGCACAGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | CTGGCCTCACAAGAGGCTTACTCTTCACACTCCATGTCTATGAAAAGTAACTTTACAGTGTTATCTTCTTaGAAAGCCACCACCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LASQEAYSSHSMSMKSNFTVLSS*KATTNW Trigger: CCAGTTGGTGGTGGCTTTCAAAGAAGATAACACTGT...AAAGTTACTTTTCATAGACATGGAGTGTGAAGAGTAAGCCTCTTGTGAGGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS-3UTR CAA 90 bp | CACTCTCTAGCTTCAAGTCTTAATTTGGTTTGGAAGCAAATTTATTTCTGTGCACAGAACCGGAGAACTTaGGGCAGTGAGGCTTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: HSLASSLNLVWKQIYFCAQNRRT*GSEACM Trigger: CATGCAAGCCTCACTGCCCAAAGTTCTCCGGTTCTG...TGCACAGAAATAAATTTGCTTCCAAACCAAATTAAGACTTGAAGCTAGAGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
||
| CDS CCA 90 bp | TGCTTAAAAGCAACAGTGTTATCTTCTTTGAAAGCCACCACCAACTaGTTACTTAAGCCAAACCGAACAAGCTGTGTGGTTACCATGACT | + |
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Preference number: 5 (lower is better) Translates to: CLKATVLSSLKATTN*LLKPNRTSCVVTMT Trigger: AGTCATGGTAACCACACAGCTTGTTCGGTTTGGCTTAAGTAACCAGTTGGTGGTGGCTTTCAAAGAAGATAACACTGTTGCTTTTAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS GCA 90 bp | CTTCAAGCCAGTTCTATTGTCTTCACTTTCTCCATAACCAAGGGTTaGCAGGGAAATATTCTTCAGATGACGATACTGCTTTATAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: LQASSIVFTFSITKG*QGNILQMTILLYSK Trigger: TTTGCTATAAAGCAGTATCGTCATCTGAAGAATATTTCCCTGGCAACCCTTGGTTATGGAGAAAGTGAAGACAATAGAACTGGCTTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS-3UTR CAA 90 bp | CACTCTCTAGCTTCAAGTCTTAATTTGGTTTGGAAGCAAATTTATTTCTGTGCAGTGAGCTTCTTGGCTTaGATTTCCATCTTCAATATG | + |
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Preference number: 5 (lower is better) Translates to: HSLASSLNLVWKQIYFCAVSFLA*ISIFNM Trigger: CATATTGAAGATGGAAATCAAAGCCAAGAAGCTCAC...TGCACAGAAATAAATTTGCTTCCAAACCAAATTAAGACTTGAAGCTAGAGAGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS CCA 72 bp | CCTCCTCAGACAGCAGAGGCAGGACAGCAAGGCCGATaGCTGCTTCTGGTACCCATCTTTGCTTCCGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: PPQTAEAGQQGR*LLLVPIFASAL Trigger: GAGAGCGGAAGCAAAGATGGGTACCAGAAGCAGCCATCGGCCTTGCTGTCCTGCCTCTGCTGTCTGAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 ENSMUST00000170972.2 |
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| CDS CAA 72 bp | ATGAGGTCGCTGATAGTGACCAGGACGTACCATCCGTaGACGAATTCCCACTGGTCAGCGCCACACACGCGC | + |
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Preference number: 6 (lower is better) Translates to: MRSLIVTRTYHP*TNSHWSAPHTR Trigger: GCGCGTGTGTGGCGCTGACCAGTGGGAATTCGTCAACGGATGGTACGTCCTGGTCACTATCAGCGACCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS GCA 72 bp | CAATCCAGCCGCAGAAGGTGTACCCCAGGTAGATCATaGCAGCGCAAGCACAGAACCGGAGAACTTTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: QSSRRRCTPGRS*QRKHRTGELWA Trigger: TGCCCAAAGTTCTCCGGTTCTGTGCTTGCGCTGGCATGATCTACCTGGGGTACACCTTCTGCGGCTGGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS CCA 72 bp | GTGACCAGGACGTACCATCCGTTGACGAATTCCCACTaGTCAGCGCCACACACGCGCTGTTTGTACTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VTRTYHPLTNSH*SAPHTRCLYFS Trigger: GGAGAAGTACAAACAGCGCGTGTGTGGCGCTGACCAGTGGGAATTCGTCAACGGATGGTACGTCCTGGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS CCA 72 bp | CAGCAGAGGCAGGACAGCAAGGCCGATGGCTGCTTCTaGTACCCATCTTTGCTTCCGCTCTCCTTCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: QQRQDSKADGCF*YPSLLPLSFRN Trigger: ATTCCTGAAGGAGAGCGGAAGCAAAGATGGGTACCAGAAGCAGCCATCGGCCTTGCTGTCCTGCCTCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 ENSMUST00000170972.2 |
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| CDS TCA 72 bp | AGAAAGATGTCTGTGCCCAGTCCTCGGGTTCCGTGGTaGGCACCTGAAGGTCCAGGTGAATGCAGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RKMSVPSPRVPW*APEGPGECSLS Trigger: AGACAGACTGCATTCACCTGGACCTTCAGGTGCTCACCACGGAACCCGAGGACTGGGCACAGACATCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS GCA 72 bp | ACAGCAAGGCCGATGGCTGCTTCTGGTACCCATCTTTaGTTCCGCTCTCCTTCAGGAATTTCTGCAGATCTG | + |
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Preference number: 6 (lower is better) Translates to: TARPMAASGTHL*FRSPSGISADL Trigger: CAGATCTGCAGAAATTCCTGAAGGAGAGCGGAAGCAAAGATGGGTACCAGAAGCAGCCATCGGCCTTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 ENSMUST00000170972.2 |
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| CDS CAA 90 bp | ATTATTGTCATGAGGTCGCTGATAGTGACCAGGACGTACCATCCGTaGACGAATTCCCACTGGTCAGCGCCACACACGCGCTGTTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: IIVMRSLIVTRTYHP*TNSHWSAPHTRCLY Trigger: GTACAAACAGCGCGTGTGTGGCGCTGACCAGTGGGAATTCGTCAACGGATGGTACGTCCTGGTCACTATCAGCGACCTCATGACAATAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS TCA 72 bp | TCTCTCGGGAATGAACTGCCTGTAGGTCAATTCCTTTaGGGGCAAAGGAGATATCAACTTGCACGAGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: SLGNELPVGQFL*GQRRYQLARAD Trigger: ATCGGCTCGTGCAAGTTGATATCTCCTTTGCCCTCAAAGGAATTGACCTACAGGCAGTTCATTCCCGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS CCA 72 bp | CATTCAGCGACTATGTTCAGGTTTTCAAACTTCTCGTaGTACGGTCCTAAGACAATCCAGCCGCAGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: HSATMFRFSNFS*YGPKTIQPQKV Trigger: CACCTTCTGCGGCTGGATTGTCTTAGGACCGTACCACGAGAAGTTTGAAAACCTGAACATAGTCGCTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS TCA 72 bp | AAAAAGAGCAACCATTTCCCACCACCGGCAGATTTCTaGGAGCAGAGTTCAGTTGAGATGACTGTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: KKSNHFPPPADF*EQSSVEMTVFP Trigger: AGGGAAGACAGTCATCTCAACTGAACTCTGCTCTCAGAAATCTGCCGGTGGTGGGAAATGGTTGCTCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170972.2 |
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| CDS GCA 72 bp | AGCAAGAACAATGGATCTCGTGCACAGGATAAGGGATaGCAGGCAGATCATAATGACGAACACATCAAACAC | + |
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Preference number: 6 (lower is better) Translates to: SKNNGSRAQDKG*QADHNDEHIKH Trigger: GTGTTTGATGTGTTCGTCATTATGATCTGCCTGGCATCCCTTATCCTGTGCACGAGATCCATTGTTCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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| CDS GCA 72 bp | AGTTCTATTGTCTTCACTTTCTCCATAACCAAGGGTTaGCAGGGAAATATTCTTCAGATGACGATACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSIVFTFSITKG*QGNILQMTILL Trigger: AAGCAGTATCGTCATCTGAAGAATATTTCCCTGGCAACCCTTGGTTATGGAGAAAGTGAAGACAATAGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011152.14 ENSMUST00000098524.5 |
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