Pregenerated sensors for MCOLN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004567Ensembl transcript IDs: ENSMUST00000004683.13, ENSMUST00000160338.2, ENSMUST00000161842.2, ENSMUST00000208306.2, ENSMUST00000208359.2, ENSMUST00000208943.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCATTCACCAGCAGCGAATaGTCCTCCGGGGAGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: ALHALPFPCVRFDQPKPSFTSSE*SSGESL Trigger: CAGGGACTCCCCGGAGGACCATTCGCTGCTGGTGAA...TGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161842.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAACAGCCGCCCTACATaGCCTCCCTTTCCCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PYMPSLSPVSDSISPSPHNSRPT*PPFPLC Trigger: ACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTT...GTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGAACAGCCGCCCTACATaGCCTCCCTTTCCCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TAALHALPFPCVRFDQPKNSRPT*PPFPLC Trigger: ACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTT...CTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| 3UTR-3UTR CCA 90 bp | CTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAACCTCCGGGGAGTCCCTaGAAGAGAGAAATGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: LHALPFPCVRFDQPKPSQPPGSP*KREMEK Trigger: TTTTTCCATTTCTCTCTTCCAGGGACTCCCCGGAGG...TTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161842.2 |
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| CDS-3UTR TCA 90 bp | CGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCGGTTGTTGGGGCTGGTaGGGTCCCCACCTGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RPTCPPFPLCPIRSAQALGCWGW*GPHLGP Trigger: GGGACCCAGGTGGGGACCTCACCAGCCCCAACAACC...GAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | GCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCAGAGCCACACCAGGCTaGTGTGACCCTGCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: AALHALPFPCVRFDQPKPRATPG*CDPAGP Trigger: AGGCCCAGCAGGGTCACAGCAGCCTGGTGTGGCTCT...GGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS-3UTR GCA 90 bp | CGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCAGAGCCACACCAGGCTaGTGTGACCCTGCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RPTCPPFPLCPIRSAQALRATPG*CDPAGP Trigger: AGGCCCAGCAGGGTCACAGCAGCCTGGTGTGGCTCT...GAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS-3UTR GCA 90 bp | CAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTGCAGCATCAGCTTaGAGGGCTTGCGGCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: QPPYMPSLSPVSDSISPSPAASA*RACGLW Trigger: CCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGG...GCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | AACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAAGAGCCACACCAGGCTaGTGTGACCCTGCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NSRPTCPPFPLCPIRSAQRATPG*CDPAGP Trigger: AGGCCCAGCAGGGTCACAGCAGCCTGGTGTGGCTCT...TTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS-3UTR GCA 90 bp | CAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCGGCGCCGGTGATGAGTaGAATGAAGAGGCTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPPYMPSLSPVSDSISPSGAGDE*NEEAQH Trigger: GTGCTGAGCCTCTTCATTGCACTCATCACCGGCGCC...GCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS-3UTR GCA 90 bp | AGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCGGCGCCGGTGATGAGTaGAATGAAGAGGCTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SRPTCPPFPLCPIRSAQAGAGDE*NEEAQH Trigger: GTGCTGAGCCTCTTCATTGCACTCATCACCGGCGCC...GGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS-3UTR CCA 90 bp | CAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCAGGGCTTGCGGCCTTTaGCCCGGAACTTGTCACATG | + |
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Preference number: 4 (lower is better) Translates to: QPPYMPSLSPVSDSISPSRACGL*PGTCHM Trigger: CATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCT...GCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | TTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCTGGTCTCCAGGCGGATaGGGATTCGCCCACTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LTAALHALPFPCVRFDQPWSPGG*GFAHCA Trigger: CGCACAGTGGGCGAATCCCCATCCGCCTGGAGACCA...GGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | AGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCTTGCACTCCTGGATGTaGGTCTTGGTCTCCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SRPTCPPFPLCPIRSAQALHSWM*VLVSRR Trigger: CCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAA...GGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | CGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCTTCACCAGCAGCGAATaGTCCTCCGGGGAGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: RPTCPPFPLCPIRSAQALFTSSE*SSGESL Trigger: AAGGGACTCCCCGGAGGACCATTCGCTGCTGGTGAA...GAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004683.13 ENSMUST00000208943.2 |
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| CDS-3UTR TCA 90 bp | AGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCCCGCCGCCGCCACATaGATACAACAAACTCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SRPTCPPFPLCPIRSAQAPAAAT*IQQTRS Trigger: AGAACGAGTTTGTTGTATTCATGTGGCGGCGGCGGG...GGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | TTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCAGAGCCACACCAGGCTaGTGTGACCCTGCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FNSRPTCPPFPLCPIRSARATPG*CDPAGP Trigger: AGGCCCAGCAGGGTCACAGCAGCCTGGTGTGGCTCT...GGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS-3UTR CCA 90 bp | ACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAGGGGTGAGGTCCCCACCTaGGTCCCATACCCAGGATTG | + |
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Preference number: 4 (lower is better) Translates to: TCPPFPLCPIRSAQALTRGEVPT*VPYPGL Trigger: CAATCCTGGGTATGGGACCCAGGTGGGGACCTCACC...CCTTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | ACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGTGCCACGACGGAACTTaGCAGATGTGGGGCTATCCT | + |
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Preference number: 4 (lower is better) Translates to: TAALHALPFPCVRFDQPKCHDGT*QMWGYP Trigger: AGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCA...CTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
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| CDS-3UTR CCA 90 bp | CTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAACCTGCTGGGCCTGCATaGCCGCGAACGTCACAAACA | + |
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Preference number: 4 (lower is better) Translates to: LHALPFPCVRFDQPKPSQPAGPA*PRTSQT Trigger: TGTTTGTGACGTTCGCGGCCATGCAGGCCCAGCAGG...TTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS-3UTR CCA 90 bp | ACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGGGAACTTGCCAGATGTaGGGCTATCCTGGCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: TAALHALPFPCVRFDQPKGTCQM*GYPGTA Trigger: AGCAGTGCCAGGATAGCCCCACATCTGGCAAGTTCC...CTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
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| CDS-3UTR CCA 90 bp | CCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACGGAACTTGCCAGATGTaGGGCTATCCTGGCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: PYMPSLSPVSDSISPSPHGTCQM*GYPGTA Trigger: AGCAGTGCCAGGATAGCCCCACATCTGGCAAGTTCC...GTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
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| CDS-3UTR CCA 90 bp | GCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCATCCACAACCCAGATCTaGGGCTCCAACCTTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: ALHALPFPCVRFDQPKPSSTTQI*GSNLPQ Trigger: CTGTGGAAGGTTGGAGCCCCAGATCTGGGTTGTGGA...TGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161842.2 |
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| CDS-3UTR TCA 90 bp | TTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCGGATGTACCAGCCATTaGCAAACTCCAGCCGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LTAALHALPFPCVRFDQPGCTSH*QTPAVP Trigger: GGGAACGGCTGGAGTTTGTCAATGGCTGGTACATCC...GGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | ACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAGGGGGTGTTTGCACTCCTaGATGTGGGTCTTGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TCPPFPLCPIRSAQALTRGCLHS*MWVLVS Trigger: GGAGACCAAGACCCACATCCAGGAGTGCAAACACCC...CCTTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | GCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACATGTCTGGAGACACTaGGGTGTTTGCACTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ALHALPFPCVRFDQPKPSHVWRH*GVCTPG Trigger: TCCAGGAGTGCAAACACCCCAGTGTCTCCAGACATG...TGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | TACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAGTTCACCAGCAGCGAATaGTCCTCCGGGGAGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: YMPSLSPVSDSISPSPHKFTSSE*SSGESL Trigger: AAGGGACTCCCCGGAGGACCATTCGCTGCTGGTGAA...CTTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004683.13 ENSMUST00000208943.2 |
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| CDS-3UTR GCA 90 bp | AACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAAGACACTGGGGTGTTTaGACTCCTGGATGTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: NSRPTCPPFPLCPIRSAQRHWGV*TPGCGS Trigger: AGACCCACATCCAGGAGTGCAAACACCCCAGTGTCT...TTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | CCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACCCACAGCATAGAAGATaGCTTGGTAGAGCTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PYMPSLSPVSDSISPSPHPQHRR*LGRAAP Trigger: AGGAGCAGCTCTACCAAGCCATCTTCTATGCTGTGG...GTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | CCCTTTTATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCCCTGGATGTGGGTCTTaGTCTCCAGGCGGATGGGGA | + |
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Preference number: 4 (lower is better) Translates to: PFYLTAALHALPFPCVRFPGCGS*SPGGWG Trigger: TCCCCATCCGCCTGGAGACCAAGACCCACATCCAGG...GAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATAAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | TATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCTGCTGGGCCTGCATaGCCGCGAACGTCACAAACA | + |
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Preference number: 4 (lower is better) Translates to: YLTAALHALPFPCVRFDQPAGPA*PRTSQT Trigger: TGTTTGTGACGTTCGCGGCCATGCAGGCCCAGCAGG...CTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS-3UTR CCA 90 bp | CTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAGGAACTTGCCAGATGTaGGGCTATCCTGGCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LHALPFPCVRFDQPKPSQGTCQM*GYPGTA Trigger: AGCAGTGCCAGGATAGCCCCACATCTGGCAAGTTCC...TTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
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| CDS-3UTR TCA 90 bp | CCCAAGCCCTCACAAGGCCTGTCAGACGCAGATCTTTTAAAGCAAATTCTAAAAGCCGTTCCCAGAGGCTaGTTTCCCGACCCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PKPSQGLSDADLLKQILKAVPRG*FPDPAA Trigger: GGCGGCGGGGTCGGGAAATCAGCCTCTGGGAACGGC...TTTTAGAATTTGCTTTAAAAGATCTGCGTCTGACAGGCCTTGTGAGGGCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | TACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAGAAGATCTTGACCACCTaGAGCATCAGCTTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: YMPSLSPVSDSISPSPHKKILTT*SISLQG Trigger: GCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTT...CTTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | AACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGTCTTCAGCTGGAAGTaGATGGTGACGTTGATCAGC | + |
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Preference number: 4 (lower is better) Translates to: NSRPTCPPFPLCPIRSAQVFSWK*MVTLIS Trigger: GCTGATCAACGTCACCATCCACTTCCAGCTGAAGAC...TTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | CTTTTATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGACCTGCTGGGCCTGCATaGCCGCGAACGTCACAAACA | + |
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Preference number: 4 (lower is better) Translates to: LLFNSRPTCPPFPLCPIRPAGPA*PRTSQT Trigger: TGTTTGTGACGTTCGCGGCCATGCAGGCCCAGCAGG...TCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS-3UTR TCA 90 bp | TACATTCCCTTTTATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCGCAGAGAGCCAAAGCTaGTCCATTGGCCCAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: YIPFYLTAALHALPFPCVAESQS*SIGPRP Trigger: GGGCCTTGGGCCAATGGATCAGCTTTGGCTCTCTGC...GACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATAAAAGGGAATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | ACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAGGCCAAAGAGAATGAGCTaGACAGTGACCACCAAGATC | + |
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Preference number: 4 (lower is better) Translates to: TCPPFPLCPIRSAQALTRPKRMS*TVTTKI Trigger: GATCTTGGTGGTCACTGTGCAGCTCATTCTCTTTGG...CCTTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | TATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGTGCCACGACGGAACTTaGCAGATGTGGGGCTATCCT | + |
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Preference number: 4 (lower is better) Translates to: YLTAALHALPFPCVRFDQCHDGT*QMWGYP Trigger: AGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCA...CTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
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| CDS-3UTR CCA 90 bp | CTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAAATGTCACCACCAGCTaGTTGCTGAGCCCAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LHALPFPCVRFDQPKPSQNVTTS*LLSPKR Trigger: TCTCTTTGGGCTCAGCAACCAGCTGGTGGTGACATT...TTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | CCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACTTGTTGATGAGGCTCTaGAGGTTAATTGTCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PYMPSLSPVSDSISPSPHLLMRL*RLIVFS Trigger: GCTGAAGACAATTAACCTGCAGAGCCTCATCAACAA...GTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | TACATTCCCTTTTATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCGGCGCCGGTGATGAGTaGAATGAAGAGGCTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: YIPFYLTAALHALPFPCVGAGDE*NEEAQH Trigger: GTGCTGAGCCTCTTCATTGCACTCATCACCGGCGCC...GACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATAAAAGGGAATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004683.13 ENSMUST00000208943.2 |
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| CDS-3UTR CCA 90 bp | TCCCTTTTATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTAGTCCAAGTCCTCACTaGGGATGTCAGGGGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLLFNSRPTCPPFPLCPISPSPH*GCQGVC Trigger: ACAGACCCCCTGACATCCCCAGTGAGGACTTGGACT...AATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATAAAAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | TACATTCCCTTTTATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCTGCCACGACGGAACTTaGCAGATGTGGGGCTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: YIPFYLTAALHALPFPCVCHDGT*QMWGYP Trigger: AGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCA...GACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATAAAAGGGAATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | TATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGTCAGGAGGATCCACCTaGATACAGTCAGTGACTACC | + |
|
Preference number: 4 (lower is better) Translates to: YLTAALHALPFPCVRFDQSGGST*IQSVTT Trigger: GGTAGTCACTGACTGTATCCAGGTGGATCCTCCTGA...CTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | CCCTTTTATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCTGTTGTCTCCATGTCTaGAGACACTGGGGTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFYLTAALHALPFPCVRFCCLHV*RHWGVC Trigger: GCAAACACCCCAGTGTCTCCAGACATGGAGACAACA...GAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATAAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | CCCAAGCCCTCACAAGGCCTGTCAGACGCAGATCTTTTAAAGCAAATTCTAAAACCAAAGCTGATCCATTaGCCCAAGGCCCACCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKPSQGLSDADLLKQILKPKLIH*PKAHPH Trigger: GTGGGGGTGGGCCTTGGGCCAATGGATCAGCTTTGG...TTTTAGAATTTGCTTTAAAAGATCTGCGTCTGACAGGCCTTGTGAGGGCTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | CAAGCCCTCACAAGGCCTGTCAGACGCAGATCTTTTAAAGCAAATTCTAAAAATTCAGCTTGCAGGGCTTaGGGCCTTTGGCCCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QALTRPVRRRSFKANSKNSACRA*GLWPGT Trigger: AGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGA...ATTTTTAGAATTTGCTTTAAAAGATCTGCGTCTGACAGGCCTTGTGAGGGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR GCA 90 bp | CCCAAGCCCTCACAAGGCCTGTCAGACGCAGATCTTTTAAAGCAAATTCTAAAAGCTCACTCTTCTCTGTaGCAGTACCTCCTTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKPSQGLSDADLLKQILKAHSSL*QYLLDG Trigger: ACCATCAAGGAGGTACTGGCACAGAGAAGAGTGAGC...TTTTAGAATTTGCTTTAAAAGATCTGCGTCTGACAGGCCTTGTGAGGGCTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208359.2 |
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| CDS-3UTR TCA 90 bp | CCCAAGCCCTCACAAGGCCTGTCAGACGCAGATCTTTTAAAGCAAATTCTAAAATGTGGAATTTCAGTGTaGGGTTCTTGTAACTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PKPSQGLSDADLLKQILKCGISV*GSCNWR Trigger: GCGCCAGTTACAAGAACCTCACACTGAAATTCCACA...TTTTAGAATTTGCTTTAAAAGATCTGCGTCTGACAGGCCTTGTGAGGGCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR TCA 90 bp | CAAGCCCTCACAAGGCCTGTCAGACGCAGATCTTTTAAAGCAAATTCTAAAAATAATAGCCCAGGTAGATaGCAGCCACACAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QALTRPVRRRSFKANSKNNSPGR*QPHSSR Trigger: TCTGCTGCTGTGTGGCTGTCATCTACCTGGGCTATT...ATTTTTAGAATTTGCTTTAAAAGATCTGCGTCTGACAGGCCTTGTGAGGGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | CAGCCCAAGCCCTCACAAGGCCTGTCAGACGCAGATCTTTTAAAGCAAATTCTAGTCAGTGACTACCCTTaGATCAATGTCAAAGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: QPKPSQGLSDADLLKQILVSDYP*INVKGI Trigger: GATACCTTTGACATTGATCCAAGGGTAGTCACTGAC...TAGAATTTGCTTTAAAAGATCTGCGTCTGACAGGCCTTGTGAGGGCTTGGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CCA 90 bp | AAGCCCTCACAAGGCCTGTCAGACGCAGATCTTTTAAAGCAAATTCTAAAAATATTAATTGTCTTCAGCTaGAAGTGGATGGTGACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPSQGLSDADLLKQILKILIVFS*KWMVTL Trigger: CAACGTCACCATCCACTTCCAGCTGAAGACAATTAA...TATTTTTAGAATTTGCTTTAAAAGATCTGCGTCTGACAGGCCTTGTGAGGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS CCA 90 bp | GGCCACGGTGGTAGTACCGCTGGCAGAGAGCCAAAGCTGATCCATTaGCCCAAGGCCCACCCCCACCACGGACATAGGCATACCGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GHGGSTAGREPKLIH*PKAHPHHGHRHTGP Trigger: TGGGCCGGTATGCCTATGTCCGTGGTGGGGGTGGGCCTTGGGCCAATGGATCAGCTTTGGCTCTCTGCCAGCGGTACTACCACCGTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | ACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGGTCCCATACCCAGGATaGGGGGTCAGCAGCCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TAALHALPFPCVRFDQPKVPYPG*GVSSRS Trigger: TGAGCGGCTGCTGACCCCCAATCCTGGGTATGGGAC...CTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | ACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGTCCTGGATGTGGGTCTaGGTCTCCAGGCGGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TAALHALPFPCVRFDQPKSWMWV*VSRRMG Trigger: CCCCATCCGCCTGGAGACCAAGACCCACATCCAGGA...CTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS TCA 90 bp | GTCCACATGGCCACGGTGGTAGTACCGCTGGCAGAGAGCCAAAGCTaGTCCATTGGCCCAAGGCCCACCCCCACCACGGACATAGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: VHMATVVVPLAESQS*SIGPRPTPTTDIGI Trigger: TATGCCTATGTCCGTGGTGGGGGTGGGCCTTGGGCCAATGGATCAGCTTTGGCTCTCTGCCAGCGGTACTACCACCGTGGCCATGTGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS GCA 90 bp | ATTTCCCGACCCCGCCGCCGCCACATGAATACAACAAACTCGTTCTaGAGCAGGAAGCCACGGAGCAGTGAGCGGGCGCACAGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISRPRRRHMNTTNSF*SRKPRSSERAHSRK Trigger: CTTCCTGCTGTGCGCCCGCTCACTGCTCCGTGGCTTCCTGCTGCAGAACGAGTTTGTTGTATTCATGTGGCGGCGGCGGGGTCGGGAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | AACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAATCAGCTTGCAGGGCTaGCGGCCTTTGGCCCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NSRPTCPPFPLCPIRSAQISLQG*RPLARN Trigger: GTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGAT...TTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | ACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGACCTGCAGCATCAGCTaGCAGGGCTTGCGGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TAALHALPFPCVRFDQPKTCSIS*QGLRPL Trigger: CAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGT...CTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | ACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAGGGCCAAAGCTGATCCATaGGCCCAAGGCCCACCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TCPPFPLCPIRSAQALTRAKADP*AQGPPP Trigger: TGGGGGTGGGCCTTGGGCCAATGGATCAGCTTTGGC...CCTTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | CAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCGAGACACTGGGGTGTTaGCACTCCTGGATGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPPYMPSLSPVSDSISPSETLGC*HSWMWV Trigger: GACCCACATCCAGGAGTGCAAACACCCCAGTGTCTC...GCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS GCA 90 bp | GACAGCGAGCGGAACTGCACAGTGACCACCAAGATCTTGACCACCTaGAGCATCAGCTTGCAGGGCTTGCGGCCTTTGGCCCGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: DSERNCTVTTKILTT*SISLQGLRPLARNL Trigger: CAAGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTTCCGCTCGCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208306.2 |
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| CDS GCA 90 bp | GGGAGTCCCTTCCACAGCAGCAGAAAAGGCTACAAGCTGAGCCACTaGCACGACGGAACTTGCCAGATGTGGGGCTATCCTGGCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSPFHSSRKGYKLSH*HDGTCQMWGYPGTA Trigger: AGCAGTGCCAGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCAGTGGCTCAGCTTGTAGCCTTTTCTGCTGCTGTGGAAGGGACTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004683.13 ENSMUST00000208359.2 |
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| CDS CCA 90 bp | CATCAGCTTGCAGGGCTTGCGGCCTTTGGCCCGGAACTTGTCACATaGGCTCATAAAGAAGTACTTGAGGCGGCGGCGGAGGTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HQLAGLAAFGPELVT*AHKEVLEAAAEVFL Trigger: GAGGAAGACCTCCGCCGCCGCCTCAAGTACTTCTTTATGAGCCCATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
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| CDS CCA 90 bp | TTGTCTCCATGTCTGGAGACACTGGGGTGTTTGCACTCCTGGATGTaGGTCTTGGTCTCCAGGCGGATGGGGATTCGCCCACTGTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSPCLETLGCLHSWM*VLVSRRMGIRPLCA Trigger: AGCGCACAGTGGGCGAATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCTCCAGACATGGAGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | CCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACCTCATAAAGAAGTACTaGAGGCGGCGGCGGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PYMPSLSPVSDSISPSPHLIKKY*RRRRRS Trigger: AGACCTCCGCCGCCGCCTCAAGTACTTCTTTATGAG...GTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | CGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCAGGATGTACCAGCCATaGACAAACTCCAGCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPTCPPFPLCPIRSAQALRMYQP*TNSSRS Trigger: GGAACGGCTGGAGTTTGTCAATGGCTGGTACATCCT...GAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS GCA 90 bp | GAAGCCGGAAGCTGTTGTCTCCATGTCTGGAGACACTGGGGTGTTTaGACTCCTGGATGTGGGTCTTGGTCTCCAGGCGGATGGGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: EAGSCCLHVWRHWGV*TPGCGSWSPGGWGF Trigger: GAATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCTCCAGACATGGAGACAACAGCTTCCGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS GCA 90 bp | AGCAGCAGAAAAGGCTACAAGCTGAGCCACTGCCACGACGGAACTTaGCAGATGTGGGGCTATCCTGGCACTGCTCGATGTAGGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSRKGYKLSHCHDGT*QMWGYPGTARCRPG Trigger: TCCAGGCCTACATCGAGCAGTGCCAGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCAGTGGCTCAGCTTGTAGCCTTTTCTGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
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| CDS GCA 90 bp | GCTCCAACCTTCCACAGCAGCAGAAAAGGCTACAAGCTGAGCCACTaGCACGACGGAACTTGCCAGATGTGGGGCTATCCTGGCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: APTFHSSRKGYKLSH*HDGTCQMWGYPGTA Trigger: AGCAGTGCCAGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCAGTGGCTCAGCTTGTAGCCTTTTCTGCTGCTGTGGAAGGTTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161842.2 |
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| CDS CCA 90 bp | AAGCTGTTGTCTCCATGTCTGGAGACACTGGGGTGTTTGCACTCCTaGATGTGGGTCTTGGTCTCCAGGCGGATGGGGATTCGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: KLLSPCLETLGCLHS*MWVLVSRRMGIRPL Trigger: CAGTGGGCGAATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCTCCAGACATGGAGACAACAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS CCA 90 bp | AAAGGCTACAAGCTGAGCCACTGCCACGACGGAACTTGCCAGATGTaGGGCTATCCTGGCACTGCTCGATGTAGGCCTGGAGCTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGYKLSHCHDGTCQM*GYPGTARCRPGAHS Trigger: AGAGTGAGCTCCAGGCCTACATCGAGCAGTGCCAGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCAGTGGCTCAGCTTGTAGCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
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| CDS-3UTR CAA 90 bp | ACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAGGGTCACCACCAGCTGGTaGCTGAGCCCAAAGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: TCPPFPLCPIRSAQALTRVTTSW*LSPKRM Trigger: CATTCTCTTTGGGCTCAGCAACCAGCTGGTGGTGAC...CCTTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | GCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCAGGGATCTCATTGTaGATGAGGCTCTGCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: AALHALPFPCVRFDQPKPSGISL*MRLCRL Trigger: TAACCTGCAGAGCCTCATCAACAATGAGATCCCTGA...GGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS TCA 90 bp | CATGAATACAACAAACTCGTTCTGCAGCAGGAAGCCACGGAGCAGTaGGCGGGCGCACAGCAGGAAGGACAGGGAGCAGGTGAGGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: HEYNKLVLQQEATEQ*AGAQQEGQGAGEDN Trigger: GTTATCCTCACCTGCTCCCTGTCCTTCCTGCTGTGCGCCCGCTCACTGCTCCGTGGCTTCCTGCTGCAGAACGAGTTTGTTGTATTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS CCA 90 bp | CATGTCTGGAGACACTGGGGTGTTTGCACTCCTGGATGTGGGTCTTaGTCTCCAGGCGGATGGGGATTCGCCCACTGTGCGCTTTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: HVWRHWGVCTPGCGS*SPGGWGFAHCALYC Trigger: ACAATAAAGCGCACAGTGGGCGAATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCTCCAGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS CCA 90 bp | GGTTCTTGTAACTGGCGCTGCCATCCAAGAAGTCCAAGTCCTCACTaGGGATGTCAGGGGGTCTGTCAGGAGGATCCACCTGGATACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSCNWRCHPRSPSPH*GCQGVCQEDPPGYS Trigger: ACTGTATCCAGGTGGATCCTCCTGACAGACCCCCTGACATCCCCAGTGAGGACTTGGACTTCTTGGATGGCAGCGCCAGTTACAAGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | TTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCCTTTGGCCCGGAACTaGTCACATGGGCTCATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FNSRPTCPPFPLCPIRSAPLARN*SHGLIK Trigger: CTTTATGAGCCCATGTGACAAGTTCCGGGCCAAAGG...GGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | CTTTTATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGACAGGGCTTGCGGCCTTaGGCCCGGAACTTGTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LLFNSRPTCPPFPLCPIRQGLRP*ARNLSH Trigger: ATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCTG...TCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | CCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAGCATAGAAGATGGCTaGGTAGAGCTGCTCCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PTCPPFPLCPIRSAQALTSIEDG*VELLLC Trigger: ACACAGGAGCAGCTCTACCAAGCCATCTTCTATGCT...TGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | TTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCCAATCAGGGATCTCATaGTTGATGAGGCTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTAALHALPFPCVRFDQPQSGIS*LMRLCR Trigger: CCTGCAGAGCCTCATCAACAATGAGATCCCTGATTG...GGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | GCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCAAACATGTCGTCTCCGTaGATGAGTGAGAACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: ALHALPFPCVRFDQPKPSNMSSP*MSENRH Trigger: GTGTCTGTTCTCACTCATCAACGGAGACGACATGTT...TGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS GCA 90 bp | GAGTTTATGCAATACTGCACAGTGACCACCAAGATCTTGACCACCTaGAGCATCAGCTTGCAGGGCTTGCGGCCTTTGGCCCGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: EFMQYCTVTTKILTT*SISLQGLRPLARNL Trigger: CAAGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTATTGCATAAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160338.2 |
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| CDS CCA 90 bp | TGTCGGAAGGCAATGGTGTTCTCTTCCCGGAATGTCACCACCAGCTaGTTGCTGAGCCCAAAGAGAATGAGCTGCACAGTGACCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CRKAMVFSSRNVTTS*LLSPKRMSCTVTTK Trigger: CTTGGTGGTCACTGTGCAGCTCATTCTCTTTGGGCTCAGCAACCAGCTGGTGGTGACATTCCGGGAAGAGAACACCATTGCCTTCCGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | AACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAAACATGTCGTCTCCGTaGATGAGTGAGAACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: NSRPTCPPFPLCPIRSAQNMSSP*MSENRH Trigger: GTGTCTGTTCTCACTCATCAACGGAGACGACATGTT...TTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000208359.2 ENSMUST00000208943.2 |
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| CDS CCA 90 bp | ACAGTCAGTGACTACCCTTGGATCAATGTCAAAGGTATCATTGGCTaGGTCCACATGGCCACGGTGGTAGTACCGCTGGCAGAGAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TVSDYPWINVKGIIG*VHMATVVVPLAESQ Trigger: TTGGCTCTCTGCCAGCGGTACTACCACCGTGGCCATGTGGACCCAGCCAATGATACCTTTGACATTGATCCAAGGGTAGTCACTGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS CCA 90 bp | GGGTCTGTCAGGAGGATCCACCTGGATACAGTCAGTGACTACCCTTaGATCAATGTCAAAGGTATCATTGGCTGGGTCCACATGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GSVRRIHLDTVSDYP*INVKGIIGWVHMAT Trigger: CGTGGCCATGTGGACCCAGCCAATGATACCTTTGACATTGATCCAAGGGTAGTCACTGACTGTATCCAGGTGGATCCTCCTGACAGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS-3UTR CAA 90 bp | CTTTTATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGAGTGACCACCAAGATCTaGACCACCTGCAGCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFNSRPTCPPFPLCPIRVTTKI*TTCSIS Trigger: GCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCAC...TCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS-3UTR CAA 90 bp | GCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACCACTGTGCGCTTTATaGTCAAATGTGATCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ALHALPFPCVRFDQPKPSPLCAL*SNVIRI Trigger: TATCCTGATCACATTTGACAATAAAGCGCACAGTGG...TGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS GCA 90 bp | CACAGCATAGAAGATGGCTTGGTAGAGCTGCTCCTGTGTGTAGGCTaGAAAGGTGTCATCAGACCCATCAGAGTAACCCAGCAGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HSIEDGLVELLLCVG*KGVIRPIRVTQQEE Trigger: CTCTTCCTGCTGGGTTACTCTGATGGGTCTGATGACACCTTTGCAGCCTACACACAGGAGCAGCTCTACCAAGCCATCTTCTATGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CCA 90 bp | AAGTCCTCACTGGGGATGTCAGGGGGTCTGTCAGGAGGATCCACCTaGATACAGTCAGTGACTACCCTTGGATCAATGTCAAAGGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: KSSLGMSGGLSGGST*IQSVTTLGSMSKVS Trigger: TGATACCTTTGACATTGATCCAAGGGTAGTCACTGACTGTATCCAGGTGGATCCTCCTGACAGACCCCCTGACATCCCCAGTGAGGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS-3UTR CAA 90 bp | ACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGCCCAAGCCCTCACAAGGGTGGCAATCAAGATGTaGTACTTGTGGAAAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: TCPPFPLCPIRSAQALTRVAIKM*YLWKNV Trigger: GACATTTTTCCACAAGTACAACATCTTGATTGCCAC...CCTTGTGAGGGCTTGGGCTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS-3UTR CAA 90 bp | TATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTCGATCAGAACATGTCGTCTCCGTaGATGAGTGAGAACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: YLTAALHALPFPCVRFDQNMSSP*MSENRH Trigger: GTGTCTGTTCTCACTCATCAACGGAGACGACATGTT...CTGATCGAATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000208359.2 ENSMUST00000208943.2 |
||
| CDS CCA 90 bp | GGGATATCTCAGGTAGTATCAGGTACTGGTCCACAGCATAGAAGATaGCTTGGTAGAGCTGCTCCTGTGTGTAGGCTGCAAAGGTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GISQVVSGTGPQHRR*LGRAAPVCRLQRCH Trigger: ATGACACCTTTGCAGCCTACACACAGGAGCAGCTCTACCAAGCCATCTTCTATGCTGTGGACCAGTACCTGATACTACCTGAGATATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS-3UTR CAA 90 bp | TCCCTTTTATTTAACAGCCGCCCTACATGCCCTCCCTTTCCCCTGTGTCCGATTAGCTGGCTAGGTTCTTaGCCTCAATGCCAATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLFNSRPTCPPFPLCPISWLGS*PQCQSS Trigger: TGAAGATTGGCATTGAGGCAAAGAACCTAGCCAGCT...AATCGGACACAGGGGAAAGGGAGGGCATGTAGGGCGGCTGTTAAATAAAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS-3UTR CAA 90 bp | CAGCCCAAGCCCTCACAAGGCCTGTCAGACGCAGATCTTTTAAAGCAAATTCTAGTGACGTTGATCAGCTaGTGGAATTTCAGTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QPKPSQGLSDADLLKQILVTLIS*WNFSVR Trigger: CCTCACACTGAAATTCCACAAGCTGATCAACGTCAC...TAGAATTTGCTTTAAAAGATCTGCGTCTGACAGGCCTTGTGAGGGCTTGGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS TCA 90 bp | TGGCAATCAAGATGTTGTACTTGTGGAAAAATGTCAGGTAGCGAATaGCACCGACCCAGACTAGCAGAGTGGAGGTACCCAAGAGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: WQSRCCTCGKMSGSE*HRPRLAEWRYPREY Trigger: GTATTCTCTTGGGTACCTCCACTCTGCTAGTCTGGGTCGGTGTCATTCGCTACCTGACATTTTTCCACAAGTACAACATCTTGATTGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CCA 90 bp | GGGATCTCATTGTTGATGAGGCTCTGCAGGTTAATTGTCTTCAGCTaGAAGTGGATGGTGACGTTGATCAGCTTGTGGAATTTCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GISLLMRLCRLIVFS*KWMVTLISLWNFSV Trigger: CACACTGAAATTCCACAAGCTGATCAACGTCACCATCCACTTCCAGCTGAAGACAATTAACCTGCAGAGCCTCATCAACAATGAGATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CCA 90 bp | TCATTGTTGATGAGGCTCTGCAGGTTAATTGTCTTCAGCTGGAAGTaGATGGTGACGTTGATCAGCTTGTGGAATTTCAGTGTGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLMRLCRLIVFSWK*MVTLISLWNFSVRF Trigger: GAACCTCACACTGAAATTCCACAAGCTGATCAACGTCACCATCCACTTCCAGCTGAAGACAATTAACCTGCAGAGCCTCATCAACAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CCA 72 bp | CTGGTGAGGTCCCCACCTGGGTCCCATACCCAGGATTaGGGGTCAGCAGCCGCTCAGTCTCTGAGGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LVRSPPGSHTQD*GSAAAQSLRRA Trigger: GGCGCGCCTCAGAGACTGAGCGGCTGCTGACCCCCAATCCTGGGTATGGGACCCAGGTGGGGACCTCACCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
||
| CDS CAA 72 bp | GCTGGTGAGGTCCCCACCTGGGTCCCATACCCAGGATaGGGGGTCAGCAGCCGCTCAGTCTCTGAGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AGEVPTWVPYPG*GVSSRSVSEAR Trigger: GCGCGCCTCAGAGACTGAGCGGCTGCTGACCCCCAATCCTGGGTATGGGACCCAGGTGGGGACCTCACCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
||
| CDS TCA 72 bp | GCCACGGTGGTAGTACCGCTGGCAGAGAGCCAAAGCTaGTCCATTGGCCCAAGGCCCACCCCCACCACGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ATVVVPLAESQS*SIGPRPTPTTD Trigger: GTCCGTGGTGGGGGTGGGCCTTGGGCCAATGGATCAGCTTTGGCTCTCTGCCAGCGGTACTACCACCGTGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS GCA 72 bp | CCCCGCCGCCGCCACATGAATACAACAAACTCGTTCTaGAGCAGGAAGCCACGGAGCAGTGAGCGGGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRRRHMNTTNSF*SRKPRSSERAH Trigger: GTGCGCCCGCTCACTGCTCCGTGGCTTCCTGCTGCAGAACGAGTTTGTTGTATTCATGTGGCGGCGGCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS GCA 72 bp | AGTAGAGGTACAGCTGGGAGAAGAGCCACACCAGGCTaGTGTGACCCTGCTGGGCCTGCATGGCCGCGAACG | + |
|
Preference number: 6 (lower is better) Translates to: SRGTAGRRATPG*CDPAGPAWPRT Trigger: CGTTCGCGGCCATGCAGGCCCAGCAGGGTCACAGCAGCCTGGTGTGGCTCTTCTCCCAGCTGTACCTCTACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 ENSMUST00000208943.2 |
||
| CDS TCA 72 bp | AACAAACTCGTTCTGCAGCAGGAAGCCACGGAGCAGTaGGCGGGCGCACAGCAGGAAGGACAGGGAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: NKLVLQQEATEQ*AGAQQEGQGAG Trigger: ACCTGCTCCCTGTCCTTCCTGCTGTGCGCCCGCTCACTGCTCCGTGGCTTCCTGCTGCAGAACGAGTTTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CCA 72 bp | GCAGGGCTTGCGGCCTTTGGCCCGGAACTTGTCACATaGGCTCATAAAGAAGTACTTGAGGCGGCGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGLAAFGPELVT*AHKEVLEAAAE Trigger: CTCCGCCGCCGCCTCAAGTACTTCTTTATGAGCCCATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
||
| CDS CCA 72 bp | AGACACTGGGGTGTTTGCACTCCTGGATGTGGGTCTTaGTCTCCAGGCGGATGGGGATTCGCCCACTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RHWGVCTPGCGS*SPGGWGFAHCA Trigger: CGCACAGTGGGCGAATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CAA 72 bp | GAGACACTGGGGTGTTTGCACTCCTGGATGTGGGTCTaGGTCTCCAGGCGGATGGGGATTCGCCCACTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ETLGCLHSWMWV*VSRRMGIRPLC Trigger: GCACAGTGGGCGAATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CAA 90 bp | ACCTGCAGCATCAGCTTGCAGGGCTTGCGGCCTTTGGCCCGGAACTaGTCACATGGGCTCATAAAGAAGTACTTGAGGCGGCGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TCSISLQGLRPLARN*SHGLIKKYLRRRRR Trigger: CCTCCGCCGCCGCCTCAAGTACTTCTTTATGAGCCCATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
||
| CDS GCA 72 bp | CGGAACTGCACAGTGACCACCAAGATCTTGACCACCTaGAGCATCAGCTTGCAGGGCTTGCGGCCTTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RNCTVTTKILTT*SISLQGLRPLA Trigger: GGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208306.2 |
||
| CDS CCA 72 bp | TGTCTGGAGACACTGGGGTGTTTGCACTCCTGGATGTaGGTCTTGGTCTCCAGGCGGATGGGGATTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CLETLGCLHSWM*VLVSRRMGIRP Trigger: TGGGCGAATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCTCCAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CCA 72 bp | GGCCTGGAGCTCACTCTTCTCTGTGCCAGTACCTCCTaGGTGCTTGATGGTGTCATAGGCGCCGGTGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLELTLLCASTS*VLDGVIGAGDE Trigger: CTCATCACCGGCGCCTATGACACCATCAAGCACCCAGGAGGTACTGGCACAGAGAAGAGTGAGCTCCAGGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 |
||
| CDS CCA 72 bp | AAGCTGAGCCACTGCCACGACGGAACTTGCCAGATGTaGGGCTATCCTGGCACTGCTCGATGTAGGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KLSHCHDGTCQM*GYPGTARCRPG Trigger: TCCAGGCCTACATCGAGCAGTGCCAGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCAGTGGCTCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
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| CDS CAA 72 bp | GACAGCGAGCGGAACTGCACAGTGACCACCAAGATCTaGACCACCTGCAGCATCAGCTTGCAGGGCTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: DSERNCTVTTKI*TTCSISLQGLR Trigger: CCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTTCCGCTCGCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208306.2 |
||
| CDS CAA 90 bp | CGGCCTTTGGCCCGGAACTTGTCACATGGGCTCATAAAGAAGTACTaGAGGCGGCGGCGGAGGTCTTCCTCTTCTGTGGGGGTTGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPLARNLSHGLIKKY*RRRRRSSSSVGVVG Trigger: CCCAACAACCCCCACAGAAGAGGAAGACCTCCGCCGCCGCCTCAAGTACTTCTTTATGAGCCCATGTGACAAGTTCCGGGCCAAAGGCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
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| CDS CAA 90 bp | GAAACCATGGACAGCGAGCGGAACTGCACAGTGACCACCAAGATCTaGACCACCTGCAGCATCAGCTTGCAGGGCTTGCGGCCTTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ETMDSERNCTVTTKI*TTCSISLQGLRPLA Trigger: GGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTTCCGCTCGCTGTCCATGGTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208306.2 |
||
| CDS CAA 90 bp | CCATGTCTGGAGACACTGGGGTGTTTGCACTCCTGGATGTGGGTCTaGGTCTCCAGGCGGATGGGGATTCGCCCACTGTGCGCTTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: PCLETLGCLHSWMWV*VSRRMGIRPLCALL Trigger: CAATAAAGCGCACAGTGGGCGAATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCTCCAGACATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CAA 90 bp | TACTGCACAGTGACCACCAAGATCTTGACCACCTGCAGCATCAGCTaGCAGGGCTTGCGGCCTTTGGCCCGGAACTTGTCACATGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: YCTVTTKILTTCSIS*QGLRPLARNLSHGL Trigger: GAGCCCATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160338.2 |
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| CDS CAA 90 bp | AACTGCACAGTGACCACCAAGATCTTGACCACCTGCAGCATCAGCTaGCAGGGCTTGCGGCCTTTGGCCCGGAACTTGTCACATGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NCTVTTKILTTCSIS*QGLRPLARNLSHGL Trigger: GAGCCCATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208306.2 |
||
| CDS TCA 72 bp | GGAGTCCCTTCCACAGCAGCAGAAAAGGCTACAAGCTaGGCCACTGCCACGACGGAACTTGCCAGATGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVPSTAAEKATS*ATATTELARCG Trigger: CCCACATCTGGCAAGTTCCGTCGTGGCAGTGGCTCAGCTTGTAGCCTTTTCTGCTGCTGTGGAAGGGACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004683.13 ENSMUST00000208359.2 |
||
| CDS CAA 72 bp | GCCCGGAACTTGTCACATGGGCTCATAAAGAAGTACTaGAGGCGGCGGCGGAGGTCTTCCTCTTCTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARNLSHGLIKKY*RRRRRSSSSVG Trigger: CCCCACAGAAGAGGAAGACCTCCGCCGCCGCCTCAAGTACTTCTTTATGAGCCCATGTGACAAGTTCCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
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| CDS CAA 90 bp | TTGCTGAGCCCAAAGAGAATGAGCTGCACAGTGACCACCAAGATCTaGACCACCTGCAGCATCAGCTTGCAGGGCTTGCGGCCTTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLSPKRMSCTVTTKI*TTCSISLQGLRPLA Trigger: GGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGCTCATTCTCTTTGGGCTCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CAA 90 bp | AGAAGCCGGAAGCTGTTGTCTCCATGTCTGGAGACACTGGGGTGTTaGCACTCCTGGATGTGGGTCTTGGTCTCCAGGCGGATGGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: RSRKLLSPCLETLGC*HSWMWVLVSRRMGI Trigger: AATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCTCCAGACATGGAGACAACAGCTTCCGGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS TCA 72 bp | CTCCAACCTTCCACAGCAGCAGAAAAGGCTACAAGCTaGGCCACTGCCACGACGGAACTTGCCAGATGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LQPSTAAEKATS*ATATTELARCG Trigger: CCCACATCTGGCAAGTTCCGTCGTGGCAGTGGCTCAGCTTGTAGCCTTTTCTGCTGCTGTGGAAGGTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161842.2 |
||
| CDS GCA 72 bp | AAAGGCTACAAGCTGAGCCACTGCCACGACGGAACTTaGCAGATGTGGGGCTATCCTGGCACTGCTCGATGT | + |
|
Preference number: 6 (lower is better) Translates to: KGYKLSHCHDGT*QMWGYPGTARC Trigger: ACATCGAGCAGTGCCAGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCAGTGGCTCAGCTTGTAGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
||
| CDS GCA 72 bp | CAATACTGCACAGTGACCACCAAGATCTTGACCACCTaGAGCATCAGCTTGCAGGGCTTGCGGCCTTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QYCTVTTKILTT*SISLQGLRPLA Trigger: GGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160338.2 |
||
| CDS CCA 72 bp | TCTCCATGTCTGGAGACACTGGGGTGTTTGCACTCCTaGATGTGGGTCTTGGTCTCCAGGCGGATGGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: SPCLETLGCLHS*MWVLVSRRMGI Trigger: AATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCTCCAGACATGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CAA 72 bp | ACCACCTGCAGCATCAGCTTGCAGGGCTTGCGGCCTTaGGCCCGGAACTTGTCACATGGGCTCATAAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TTCSISLQGLRP*ARNLSHGLIKK Trigger: CTTCTTTATGAGCCCATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
||
| CDS CAA 72 bp | AAGCTGTTGTCTCCATGTCTGGAGACACTGGGGTGTTaGCACTCCTGGATGTGGGTCTTGGTCTCCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: KLLSPCLETLGC*HSWMWVLVSRR Trigger: CCGCCTGGAGACCAAGACCCACATCCAGGAGTGCAAACACCCCAGTGTCTCCAGACATGGAGACAACAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CAA 72 bp | AAAAGGCTACAAGCTGAGCCACTGCCACGACGGAACTaGCCAGATGTGGGGCTATCCTGGCACTGCTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: KRLQAEPLPRRN*PDVGLSWHCSM Trigger: CATCGAGCAGTGCCAGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCAGTGGCTCAGCTTGTAGCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
||
| CDS CAA 90 bp | GTGACCACCAAGATCTTGACCACCTGCAGCATCAGCTTGCAGGGCTaGCGGCCTTTGGCCCGGAACTTGTCACATGGGCTCATAAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VTTKILTTCSISLQG*RPLARNLSHGLIKK Trigger: CTTCTTTATGAGCCCATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
||
| CDS GCA 72 bp | TTCCACAGCAGCAGAAAAGGCTACAAGCTGAGCCACTaGCACGACGGAACTTGCCAGATGTGGGGCTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: FHSSRKGYKLSH*HDGTCQMWGYP Trigger: AGGATAGCCCCACATCTGGCAAGTTCCGTCGTGGCAGTGGCTCAGCTTGTAGCCTTTTCTGCTGCTGTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 ENSMUST00000208359.2 |
||
| CDS CCA 72 bp | TGCACTCCTGGATGTGGGTCTTGGTCTCCAGGCGGATaGGGATTCGCCCACTGTGCGCTTTATTGTCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: CTPGCGSWSPGG*GFAHCALYCQM Trigger: CATTTGACAATAAAGCGCACAGTGGGCGAATCCCCATCCGCCTGGAGACCAAGACCCACATCCAGGAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
||
| CDS CCA 72 bp | GTGGCAATCATCTTGGATCAGTTCACCAGCAGCGAATaGTCCTCCGGGGAGTCCCTTGATGGTGTCATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VAIILDQFTSSE*SSGESLDGVIG Trigger: GCCTATGACACCATCAAGGGACTCCCCGGAGGACCATTCGCTGCTGGTGAACTGATCCAAGATGATTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208943.2 |
||
| CDS CAA 72 bp | ATCAGCTTGCAGGGCTTGCGGCCTTTGGCCCGGAACTaGTCACATGGGCTCATAAAGAAGTACTTGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: ISLQGLRPLARN*SHGLIKKYLRR Trigger: CCGCCTCAAGTACTTCTTTATGAGCCCATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
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| CDS CAA 90 bp | CGGAAGGCAATGGTGTTCTCTTCCCGGAATGTCACCACCAGCTGGTaGCTGAGCCCAAAGAGAATGAGCTGCACAGTGACCACCAAGATC | + |
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Preference number: 6 (lower is better) Translates to: RKAMVFSSRNVTTSW*LSPKRMSCTVTTKI Trigger: GATCTTGGTGGTCACTGTGCAGCTCATTCTCTTTGGGCTCAGCAACCAGCTGGTGGTGACATTCCGGGAAGAGAACACCATTGCCTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS GCA 72 bp | AACAGACACTCAGAAACCATGGACAGCGAGCGGAACTaGACAGTGACCACCAAGATCTTGACCACCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: NRHSETMDSERN*TVTTKILTTCS Trigger: GCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTTCCGCTCGCTGTCCATGGTTTCTGAGTGTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208306.2 |
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| CDS CCA 72 bp | GCAATGGTGTTCTCTTCCCGGAATGTCACCACCAGCTaGTTGCTGAGCCCAAAGAGAATGAGCTGCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: AMVFSSRNVTTS*LLSPKRMSCTV Trigger: CACTGTGCAGCTCATTCTCTTTGGGCTCAGCAACCAGCTGGTGGTGACATTCCGGGAAGAGAACACCATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS CCA 72 bp | GACTACCCTTGGATCAATGTCAAAGGTATCATTGGCTaGGTCCACATGGCCACGGTGGTAGTACCGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: DYPWINVKGIIG*VHMATVVVPLA Trigger: TGCCAGCGGTACTACCACCGTGGCCATGTGGACCCAGCCAATGATACCTTTGACATTGATCCAAGGGTAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS CAA 72 bp | ATGGTGTTCTCTTCCCGGAATGTCACCACCAGCTGGTaGCTGAGCCCAAAGAGAATGAGCTGCACAGTGACC | + |
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Preference number: 6 (lower is better) Translates to: MVFSSRNVTTSW*LSPKRMSCTVT Trigger: GGTCACTGTGCAGCTCATTCTCTTTGGGCTCAGCAACCAGCTGGTGGTGACATTCCGGGAAGAGAACACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS CAA 90 bp | AAGATCTTGACCACCTGCAGCATCAGCTTGCAGGGCTTGCGGCCTTaGGCCCGGAACTTGTCACATGGGCTCATAAAGAAGTACTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KILTTCSISLQGLRP*ARNLSHGLIKKYLR Trigger: CCTCAAGTACTTCTTTATGAGCCCATGTGACAAGTTCCGGGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004683.13 ENSMUST00000160338.2 ENSMUST00000208306.2 |
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| CDS GCA 72 bp | GAAGATGGCTTGGTAGAGCTGCTCCTGTGTGTAGGCTaGAAAGGTGTCATCAGACCCATCAGAGTAACCCAG | + |
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Preference number: 6 (lower is better) Translates to: EDGLVELLLCVG*KGVIRPIRVTQ Trigger: CTGGGTTACTCTGATGGGTCTGATGACACCTTTGCAGCCTACACACAGGAGCAGCTCTACCAAGCCATCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS GCA 72 bp | TGGGTGCTTGATGGTGTCATAGGCGCCGGTGATGAGTaGAATGAAGAGGCTCAGCACCATGTAGATGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: WVLDGVIGAGDE*NEEAQHHVDEE Trigger: CTCTTCATCTACATGGTGCTGAGCCTCTTCATTGCACTCATCACCGGCGCCTATGACACCATCAAGCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004683.13 ENSMUST00000161842.2 |
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| CDS GCA 72 bp | GAGTCCCTTGATGGTGTCATAGGCGCCGGTGATGAGTaGAATGAAGAGGCTCAGCACCATGTAGATGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ESLDGVIGAGDE*NEEAQHHVDEE Trigger: CTCTTCATCTACATGGTGCTGAGCCTCTTCATTGCACTCATCACCGGCGCCTATGACACCATCAAGGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208943.2 |
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| CDS CAA 72 bp | GAGTTTATGCAATACTGCACAGTGACCACCAAGATCTaGACCACCTGCAGCATCAGCTTGCAGGGCTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: EFMQYCTVTTKI*TTCSISLQGLR Trigger: CCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTATTGCATAAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160338.2 |
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| CDS CAA 90 bp | CACCAAAATGAGTTTATGCAATACTGCACAGTGACCACCAAGATCTaGACCACCTGCAGCATCAGCTTGCAGGGCTTGCGGCCTTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: HQNEFMQYCTVTTKI*TTCSISLQGLRPLA Trigger: GGCCAAAGGCCGCAAGCCCTGCAAGCTGATGCTGCAGGTGGTCAAGATCTTGGTGGTCACTGTGCAGTATTGCATAAACTCATTTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160338.2 |
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| CDS GCA 72 bp | GTCTTGGTCTCCAGGCGGATGGGGATTCGCCCACTGTaGGCTTTATTGTCAAATGTGATCAGGATACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: VLVSRRMGIRPL*ALLSNVIRILK Trigger: CTTCAGTATCCTGATCACATTTGACAATAAAGCGCACAGTGGGCGAATCCCCATCCGCCTGGAGACCAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS GCA 72 bp | TACCTCCTTGATGGTGTCATAGGCGCCGGTGATGAGTaGAATGAAGAGGCTCAGCACCATGTAGATGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: YLLDGVIGAGDE*NEEAQHHVDEE Trigger: CTCTTCATCTACATGGTGCTGAGCCTCTTCATTGCACTCATCACCGGCGCCTATGACACCATCAAGGAGGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208359.2 |
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| CDS CCA 72 bp | CAGGTAGTATCAGGTACTGGTCCACAGCATAGAAGATaGCTTGGTAGAGCTGCTCCTGTGTGTAGGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: QVVSGTGPQHRR*LGRAAPVCRLQ Trigger: TTGCAGCCTACACACAGGAGCAGCTCTACCAAGCCATCTTCTATGCTGTGGACCAGTACCTGATACTACCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS TCA 72 bp | GGGGTCTGTCAGGAGGATCCACCTGGATACAGTCAGTaGCTACCCTTGGATCAATGTCAAAGGTATCATTGG | + |
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Preference number: 6 (lower is better) Translates to: GVCQEDPPGYSQ*LPLDQCQRYHW Trigger: CCAATGATACCTTTGACATTGATCCAAGGGTAGTCACTGACTGTATCCAGGTGGATCCTCCTGACAGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS GCA 72 bp | CCCAGACTAGCAGAGTGGAGGTACCCAAGAGAATACTaGAGACATCATAGCTGGCTAGGTTCTTTGCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: PRLAEWRYPREY*RHHSWLGSLPQ Trigger: TTGAGGCAAAGAACCTAGCCAGCTATGATGTCTGCAGTATTCTCTTGGGTACCTCCACTCTGCTAGTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS CCA 72 bp | ATGAGGCTCTGCAGGTTAATTGTCTTCAGCTGGAAGTaGATGGTGACGTTGATCAGCTTGTGGAATTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: MRLCRLIVFSWK*MVTLISLWNFS Trigger: ACTGAAATTCCACAAGCTGATCAACGTCACCATCCACTTCCAGCTGAAGACAATTAACCTGCAGAGCCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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| CDS CCA 72 bp | TTGTTGATGAGGCTCTGCAGGTTAATTGTCTTCAGCTaGAAGTGGATGGTGACGTTGATCAGCTTGTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LLMRLCRLIVFS*KWMVTLISLWN Trigger: ATTCCACAAGCTGATCAACGTCACCATCCACTTCCAGCTGAAGACAATTAACCTGCAGAGCCTCATCAACAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004683.13 |
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