Pregenerated sensors for MCMDC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046101Ensembl transcript IDs: ENSMUST00000052843.12, ENSMUST00000118098.3, ENSMUST00000125294.9, ENSMUST00000140948.9, ENSMUST00000171802.8, ENSMUST00000183059.2
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGGGAGGGTCCAGCCATTGTGGCCTGTGTCACTCTGTGGGTCCTaGGATGTACATGGAAGGCAGCTGAGCCAGACACAGAGAGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: CGRVQPLWPVSLCGS*DVHGRQLSQTQRAS Trigger: ACTTGCTCTCTGTGTCTGGCTCAGCTGCCTTCCATGTACATCCCAGGACCCACAGAGTGACACAGGCCACAATGGCTGGACCCTCCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR GCA 90 bp | AAAGAGACAATCAACACCACCAACGTGCCCTCTGACCCCCGTGTGTaGTCTGTGGCATGCGCACTCCACCACAACATGGACACACTGGGA | + |
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Preference number: 1 (lower is better) Translates to: KETINTTNVPSDPRV*SVACALHHNMDTLG Trigger: TCCCAGTGTGTCCATGTTGTGGTGGAGTGCGCATGCCACAGAGCACACACGGGGGTCAGAGGGCACGTTGGTGGTGTTGATTGTCTCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CCA 90 bp | CAATCAACACCACCAACGTGCCCTCTGACCCCCGTGTGTGCTCTGTaGCATGCGCACTCCACCACAACATGGACACACTGGGAAAAGACT | + |
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Preference number: 1 (lower is better) Translates to: QSTPPTCPLTPVCAL*HAHSTTTWTHWEKT Trigger: AGTCTTTTCCCAGTGTGTCCATGTTGTGGTGGAGTGCGCATGCCACAGAGCACACACGGGGGTCAGAGGGCACGTTGGTGGTGTTGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CCA 90 bp | CCAGCCATTGTGGCCTGTGTCACTCTGTGGGTCCTGGGATGTACATaGAAGGCAGCTGAGCCAGACACAGAGAGCAAGTCAGATATCAGT | + |
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Preference number: 1 (lower is better) Translates to: PAIVACVTLWVLGCT*KAAEPDTESKSDIS Trigger: ACTGATATCTGACTTGCTCTCTGTGTCTGGCTCAGCTGCCTTCCATGTACATCCCAGGACCCACAGAGTGACACAGGCCACAATGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR TCA 90 bp | GGCCTGTGTCACTCTGTGGGTCCTGGGATGTACATGGAAGGCAGCTaGGCCAGACACAGAGAGCAAGTCAGATATCAGTGGTCGTTTTTG | + |
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Preference number: 1 (lower is better) Translates to: GLCHSVGPGMYMEGS*ARHREQVRYQWSFL Trigger: CAAAAACGACCACTGATATCTGACTTGCTCTCTGTGTCTGGCTCAGCTGCCTTCCATGTACATCCCAGGACCCACAGAGTGACACAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR TCA 90 bp | CATGTAAAGGTACAAAGAGACAATCAACACCACCAACGTGCCCTCTaGCCCCCGTGTGTGCTCTGTGGCATGCGCACTCCACCACAACAT | + |
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Preference number: 1 (lower is better) Translates to: HVKVQRDNQHHQRAL*PPCVLCGMRTPPQH Trigger: ATGTTGTGGTGGAGTGCGCATGCCACAGAGCACACACGGGGGTCAGAGGGCACGTTGGTGGTGTTGATTGTCTCTTTGTACCTTTACATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR TCA 90 bp | GCCTCCGTCAGATTGGTCTGTGGGCATGTCTGGCAAACATTCTCTTaGTTAATGATTGATGTGGGAGGGTCCAGCCATTGTGGCCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: ASVRLVCGHVWQTFS*LMIDVGGSSHCGLC Trigger: ACACAGGCCACAATGGCTGGACCCTCCCACATCAATCATTAATCAAGAGAATGTTTGCCAGACATGCCCACAGACCAATCTGACGGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CCA 90 bp | CCAAAATACAAGGTGCTGTGGGACCCTGTAGTACCTACCACCTCCTaGCAGGAAGACGACTTGACCCCAGGAATGTTGTCTTTAGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: PKYKVLWDPVVPTTS*QEDDLTPGMLSLVS Trigger: TGACACTAAAGACAACATTCCTGGGGTCAAGTCGTCTTCCTGCCAGGAGGTGGTAGGTACTACAGGGTCCCACAGCACCTTGTATTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| 3UTR TCA 90 bp | ATTGGTCTGTGGGCATGTCTGGCAAACATTCTCTTGATTAATGATTaGTGTGGGAGGGTCCAGCCATTGTGGCCTGTGTCACTCTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: IGLWACLANILLIND*CGRVQPLWPVSLCG Trigger: CCCACAGAGTGACACAGGCCACAATGGCTGGACCCTCCCACATCAATCATTAATCAAGAGAATGTTTGCCAGACATGCCCACAGACCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CCA 90 bp | CTGGTTGCTTTTCCAAAGGTTCTAGTTCAGTTCCCAGCAACCATATaGTACTCACACCCATCTATAATGGAACCCAATACCTTTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: LVAFPKVLVQFPATI*YSHPSIMEPNTFSG Trigger: ACCAGAAAAGGTATTGGGTTCCATTATAGATGGGTGTGAGTACCATATGGTTGCTGGGAACTGAACTAGAACCTTTGGAAAAGCAACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
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| 3UTR TCA 90 bp | TGCACAGCAGGAAAGAAAGTGATTGGCAATCTGTCTAGGATCACTTaGAACTCTCAAACTGGATTTCCTCGAGTGAAGACTTGGCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: CTAGKKVIGNLSRIT*NSQTGFPRVKTWLN Trigger: ATTTAGCCAAGTCTTCACTCGAGGAAATCCAGTTTGAGAGTTTCAAGTGATCCTAGACAGATTGCCAATCACTTTCTTTCCTGCTGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| 3UTR CCA 90 bp | CTCAAGCTGGGTATGTTGGTAGGTAAAGTGTTGCTACCTGATGGGTaGAATGAACAAAACCTTTTTCACACTACAATGTTCTCTACTGTG | + |
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Preference number: 1 (lower is better) Translates to: LKLGMLVGKVLLPDG*NEQNLFHTTMFSTV Trigger: CACAGTAGAGAACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGGTAGCAACACTTTACCTACCAACATACCCAGCTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| 3UTR CCA 90 bp | AGCTTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTaGGGAAGTTTAACTGGCTTAACAAGGCACAAAGCTCTGGATTTG | + |
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Preference number: 1 (lower is better) Translates to: SLKIQHSDDLGLCKG*GSLTGLTRHKALDL Trigger: CAAATCCAGAGCTTTGTGCCTTGTTAAGCCAGTTAAACTTCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| 3UTR TCA 90 bp | CAAGAGGAAATAACAAACCGGAAACAGAAATCCTCTAAATCGAAGTaGCACAAATGTTATACAAGAGTGTTTACAGGGTATGTAGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: QEEITNRKQKSSKSK*HKCYTRVFTGYVAQ Trigger: CTGAGCTACATACCCTGTAAACACTCTTGTATAACATTTGTGTCACTTCGATTTAGAGGATTTCTGTTTCCGGTTTGTTATTTCCTCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR TCA 90 bp | GGACAGCTAATCTCTCAGTGGGTAAGGACACTTGCCCAGCAACTTGGGTCCAATCACCAACGTGCCCTCTaGCCCCCGTGTGTGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GQLISQWVRTLAQQLGSNHQRAL*PPCVLC Trigger: ACAGAGCACACACGGGGGTCAGAGGGCACGTTGGTG...ATTGGACCCAAGTTGCTGGGCAAGTGTCCTTACCCACTGAGAGATTAGCTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACGGGAGCAACACAAAATaGAGTGGCCCCGTATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PSHFLALAFPCTEAYKVYGSNTK*SGPVSQ Trigger: CTGAGATACGGGGCCACTCCATTTTGTGTTGCTCCC...GTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183059.2 |
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| 3UTR-3UTR TCA 90 bp | TACAAAGAGACAATCAACACCACCAACGTGCCCTCTGACCCCCGTGTGTGCTCTGGTAAGTTTTCAGAGTaGGTGTGTGCTGGGCATTGC | + |
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Preference number: 2 (lower is better) Translates to: YKETINTTNVPSDPRVCSGKFSE*VCAGHC Trigger: GCAATGCCCAGCACACACTCACTCTGAAAACTTACC...AGAGCACACACGGGGGTCAGAGGGCACGTTGGTGGTGTTGATTGTCTCTTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR GCA 90 bp | ACTGATGGCCAACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCAAGGCTGCGATGAGTaGGTCTTCTCTGAGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: TDGQLGHLLLHMQPETRAQGCDE*VFSEHC Trigger: ACAGTGCTCAGAGAAGACGCACTCATCGCAGCCTTG...AGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTTGGCCATCAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183059.2 |
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| 3UTR-3UTR CCA 90 bp | TACAAAGAGACAATCAACACCACCAACGTGCCCTCTGACCCCCGTGTGTGCTCTTTGTCTCCATGGGGTTaGAGAGATGGCTCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: YKETINTTNVPSDPRVCSLSPWG*RDGSEV Trigger: AACCTCTGAGCCATCTCTCCAACCCCATGGAGACAA...AGAGCACACACGGGGGTCAGAGGGCACGTTGGTGGTGTTGATTGTCTCTTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCAGCCATTGTGGCCTGTGTCACTCTGTGGGTCCTGGGATGTACATGGAAATCAGTGGTCGTTTTTaGTTCTGCTGTCAGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GSSHCGLCHSVGPGMYMEISGRF*FCCQFL Trigger: CAGAAACTGACAGCAGAACCAAAAACGACCACTGAT...TTCCATGTACATCCCAGGACCCACAGAGTGACACAGGCCACAATGGCTGGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTGTGGCATGCGCACTCCACCACAACATGGACACACTGGGAAAAGACTCAAGAGTGAGTGTGTGCTaGGCATTGCCCTTTCACATA | + |
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Preference number: 2 (lower is better) Translates to: CSVACALHHNMDTLGKDSRVSVC*ALPFHI Trigger: TATGTGAAAGGGCAATGCCCAGCACACACTCACTCT...TGAGTCTTTTCCCAGTGTGTCCATGTTGTGGTGGAGTGCGCATGCCACAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCTAATCTCTCAGTGGGTAAGGACACTTGCCCAGCAACTTGGGTCCAATCCCCAAGTCAGATATCAGTaGTCGTTTTTGGTTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QLISQWVRTLAQQLGSNPQVRYQ*SFLVLL Trigger: CAGCAGAACCAAAAACGACCACTGATATCTGACTTG...GGGATTGGACCCAAGTTGCTGGGCAAGTGTCCTTACCCACTGAGAGATTAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR TCA 90 bp | TCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGCCCCGTATCTCAGTGTaGGAGAGATTTCCAACAACA | + |
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Preference number: 2 (lower is better) Translates to: SWPWRSPVLRHIKFTRPMPRISV*ERFPTT Trigger: TGTTGTTGGAAATCTCTCTCACACTGAGATACGGGG...CATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183059.2 |
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| 3UTR-3UTR CCA 90 bp | CATGAGCTGCGGACTTTTTGTCAATGCAATCCTGATGGCTGGCTAGTAAGTAGCAAATACAAGGTGCTGTaGGACCCTGTAGTACCTACC | + |
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Preference number: 2 (lower is better) Translates to: HELRTFCQCNPDGWLVSSKYKVL*DPVVPT Trigger: GGTAGGTACTACAGGGTCCCACAGCACCTTGTATTT...GCTACTTACTAGCCAGCCATCAGGATTGCATTGACAAAAAGTCCGCAGCTCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTTCAGTCAGGGGTCAGAAGCTaGCAGATCTTTGAGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: EMAQRLRALVAFPKVLVQSGVRS*QIFEFE Trigger: CTCAAACTCAAAGATCTGCCAGCTTCTGACCCCTGA...CTGAACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCCATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAGTTCAGTTCCCAGCAACCATATGGTACTCACACCCATCTATAATGGAACCTTGTCTCCATGGGGTTaGAGAGATGGCTCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SSSVPSNHMVLTPIYNGTLSPWG*RDGSEV Trigger: AACCTCTGAGCCATCTCTCCAACCCCATGGAGACAA...GGTTCCATTATAGATGGGTGTGAGTACCATATGGTTGCTGGGAACTGAACTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGAACAGGAAAGGGAAGGGAAGCCAACAACAGGAAAGTTAGTTATGGTGATAACCCTTGTCTCTCAGTaGTGGAGCGTAACATGTAAG | + |
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Preference number: 2 (lower is better) Translates to: QEQEREGKPTTGKLVMVITLVSQ*WSVTCK Trigger: CTTACATGTTACGCTCCATCACTGAGAGACAAGGGT...TATCACCATAACTAACTTTCCTGTTGTTGGCTTCCCTTCCCTTTCCTGTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTGTGGCATGCGCACTCCACCACAACATGGACACACTGGGAAAAGACTCAATAATACTCAAAACATaGAAAACCATCATCGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: CSVACALHHNMDTLGKDSIILKT*KTIIGR Trigger: TCTCCCGATGATGGTTTTGCATGTTTTGAGTATTAT...TGAGTCTTTTCCCAGTGTGTCCATGTTGTGGTGGAGTGCGCATGCCACAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR CCA 90 bp | CAGGAACAGGAAAGGGAAGGGAAGCCAACAACAGGAAAGTTAGTTATGGTGATATCAGGGGTCAGAAGCTaGCAGATCTTTGAGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: QEQEREGKPTTGKLVMVISGVRS*QIFEFE Trigger: CTCAAACTCAAAGATCTGCCAGCTTCTGACCCCTGA...TATCACCATAACTAACTTTCCTGTTGTTGGCTTCCCTTCCCTTTCCTGTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CAA 90 bp | GGCTGGGGAAGTTTAACTGGCTTAACAAGGCACAAAGCTCTGGATTaGATTCCCAGGATAGAAATTTCGAACATTAGGCTTTCCAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: GWGSLTGLTRHKALD*IPRIEISNIRLSRC Trigger: ACACCTGGAAAGCCTAATGTTCGAAATTTCTATCCTGGGAATCAAATCCAGAGCTTTGTGCCTTGTTAAGCCAGTTAAACTTCCCCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGAAGGGAAGCCAACAACAGGAAAGTTAGTTATGGTGATAAGTGGAAGAAACTCTTGATTAATGATTaGTGTGGGAGGGTCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KGREANNRKVSYGDKWKKLLIND*CGRVQP Trigger: TGGCTGGACCCTCCCACATCAATCATTAATCAAGAG...TTTCTTCCACTTATCACCATAACTAACTTTCCTGTTGTTGGCTTCCCTTCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR GCA 90 bp | AGATCAAGTACCAAAATACAAGGTGCTGTGGGACCCTGTAGTACCTACCACCTCTTTGGGTCATTAAGTTaGACTGACTTGAACTCATCA | + |
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Preference number: 2 (lower is better) Translates to: RSSTKIQGAVGPCSTYHLFGSLS*TDLNSS Trigger: TGATGAGTTCAAGTCAGTGCAACTTAATGACCCAAA...GAGGTGGTAGGTACTACAGGGTCCCACAGCACCTTGTATTTTGGTACTTGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| 3UTR CAA 90 bp | TCCCTAAGTTTAGTAAGTAGCTTAAAAATTCAACATTCTGATGACTaGGGCCTTTGTAAGGGCTGGGGAAGTTTAACTGGCTTAACAAGG | + |
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Preference number: 2 (lower is better) Translates to: SLSLVSSLKIQHSDD*GLCKGWGSLTGLTR Trigger: CCTTGTTAAGCCAGTTAAACTTCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACTTACTAAACTTAGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| 3UTR CAA 90 bp | TGCTCTAAATATTCTTCATTATACAGCTCAAATGGAAATAATGCATaGGGAGCAACACAAAATGGAGTGGCCCCGTATCTCAGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: CSKYSSLYSSNGNNA*GATQNGVAPYLSVR Trigger: TCTCACACTGAGATACGGGGCCACTCCATTTTGTGTTGCTCCCAATGCATTATTTCCATTTGAGCTGTATAATGAAGAATATTTAGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183059.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCTTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGACTGTGTGTGTGTCCATaGTATATATACTGGAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SSLKIQHSDDLGLCKGWGLCVCP*YIYWSF Trigger: AAAACTCCAGTATATATATCATGGACACACACACAG...TCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| 3UTR-3UTR GCA 90 bp | TCTATAATGGAACCCAATACCTTTTCTGGTGTGCAGGAATACATGCAGACAAAGGTGTGCAGGAATACATaGAGACAAAGCACTCATATA | + |
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Preference number: 2 (lower is better) Translates to: SIMEPNTFSGVQEYMQTKVCRNT*RQSTHI Trigger: TATATGAGTGCTTTGTCTGCATGTATTCCTGCACAC...CTTTGTCTGCATGTATTCCTGCACACCAGAAAAGGTATTGGGTTCCATTATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
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| 3UTR GCA 72 bp | GTAGCCGCCTGGGAAAGGGAGCCTCAGCTGAGGAGCTaGCTCCGTCAGATTGGTCTGTGGGCATGTCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: VAAWEREPQLRS*LRQIGLWACLA Trigger: TGCCAGACATGCCCACAGACCAATCTGACGGAGGCAGCTCCTCAGCTGAGGCTCCCTTTCCCAGGCGGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CCA 72 bp | CCACCAACGTGCCCTCTGACCCCCGTGTGTGCTCTGTaGCATGCGCACTCCACCACAACATGGACACACTGG | + |
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Preference number: 3 (lower is better) Translates to: PPTCPLTPVCAL*HAHSTTTWTHW Trigger: CCAGTGTGTCCATGTTGTGGTGGAGTGCGCATGCCACAGAGCACACACGGGGGTCAGAGGGCACGTTGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR GCA 72 bp | ATCAACACCACCAACGTGCCCTCTGACCCCCGTGTGTaGTCTGTGGCATGCGCACTCCACCACAACATGGAC | + |
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Preference number: 3 (lower is better) Translates to: INTTNVPSDPRV*SVACALHHNMD Trigger: GTCCATGTTGTGGTGGAGTGCGCATGCCACAGAGCACACACGGGGGTCAGAGGGCACGTTGGTGGTGTTGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CCA 72 bp | TGGGAGGGTCCAGCCATTGTGGCCTGTGTCACTCTGTaGGTCCTGGGATGTACATGGAAGGCAGCTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: WEGPAIVACVTL*VLGCTWKAAEP Trigger: TGGCTCAGCTGCCTTCCATGTACATCCCAGGACCCACAGAGTGACACAGGCCACAATGGCTGGACCCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CCA 72 bp | GTCCAGCCATTGTGGCCTGTGTCACTCTGTGGGTCCTaGGATGTACATGGAAGGCAGCTGAGCCAGACACAG | + |
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Preference number: 3 (lower is better) Translates to: VQPLWPVSLCGS*DVHGRQLSQTQ Trigger: CTGTGTCTGGCTCAGCTGCCTTCCATGTACATCCCAGGACCCACAGAGTGACACAGGCCACAATGGCTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR TCA 72 bp | GTACAAAGAGACAATCAACACCACCAACGTGCCCTCTaGCCCCCGTGTGTGCTCTGTGGCATGCGCACTCCA | + |
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Preference number: 3 (lower is better) Translates to: VQRDNQHHQRAL*PPCVLCGMRTP Trigger: TGGAGTGCGCATGCCACAGAGCACACACGGGGGTCAGAGGGCACGTTGGTGGTGTTGATTGTCTCTTTGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CCA 72 bp | GTGGCCTGTGTCACTCTGTGGGTCCTGGGATGTACATaGAAGGCAGCTGAGCCAGACACAGAGAGCAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: VACVTLWVLGCT*KAAEPDTESKS Trigger: TGACTTGCTCTCTGTGTCTGGCTCAGCTGCCTTCCATGTACATCCCAGGACCCACAGAGTGACACAGGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR TCA 72 bp | CACTCTGTGGGTCCTGGGATGTACATGGAAGGCAGCTaGGCCAGACACAGAGAGCAAGTCAGATATCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: HSVGPGMYMEGS*ARHREQVRYQW Trigger: CCACTGATATCTGACTTGCTCTCTGTGTCTGGCTCAGCTGCCTTCCATGTACATCCCAGGACCCACAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CCA 72 bp | AAGGGAGCCTCAGCTGAGGAGCTGCCTCCGTCAGATTaGTCTGTGGGCATGTCTGGCAAACATTCTCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: KGASAEELPPSD*SVGMSGKHSLD Trigger: ATCAAGAGAATGTTTGCCAGACATGCCCACAGACCAATCTGACGGAGGCAGCTCCTCAGCTGAGGCTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR CCA 72 bp | CTCTCTCAAGGGCCAGCTGGACAGCTAATCTCTCAGTaGGTAAGGACACTTGCCCAGCAACTTGGGTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: LSQGPAGQLISQ*VRTLAQQLGSN Trigger: ATTGGACCCAAGTTGCTGGGCAAGTGTCCTTACCCACTGAGAGATTAGCTGTCCAGCTGGCCCTTGAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| 3UTR-3UTR CAA 90 bp | CAGCTAATCTCTCAGTGGGTAAGGACACTTGCCCAGCAACTTGGGTCCAATCCCTTTGTCTCCATGGGGTaGGAGAGATGGCTCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QLISQWVRTLAQQLGSNPFVSMG*ERWLRG Trigger: ACCTCTGAGCCATCTCTCCAACCCCATGGAGACAAA...GGGATTGGACCCAAGTTGCTGGGCAAGTGTCCTTACCCACTGAGAGATTAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| 3UTR GCA 72 bp | AGCTGGACAGCTAATCTCTCAGTGGGTAAGGACACTTaGCCAGCAACTTGGGTCCAATCCCTGGAACACATG | + |
|
Preference number: 3 (lower is better) Translates to: SWTANLSVGKDT*PATWVQSLEHM Trigger: CATGTGTTCCAGGGATTGGACCCAAGTTGCTGGGCAAGTGTCCTTACCCACTGAGAGATTAGCTGTCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGTGCTGTGGGACCCTGTAGTACCTACCACCTCCTGGCAGGAAGACGACTTGTCTTTAGTGTCACTTaGGTTGTATCCAGCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QGAVGPCSTYHLLAGRRLVFSVT*VVSSRR Trigger: CCTTCTGCTGGATACAACCAAAGTGACACTAAAGAC...AAGTCGTCTTCCTGCCAGGAGGTGGTAGGTACTACAGGGTCCCACAGCACCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGTGCTGTGGGACCCTGTAGTACCTACCACCTCCTGGCAGGAAGACGACTTTTAGTGTCACTTTGGTaGTATCCAGCAGAAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: QGAVGPCSTYHLLAGRRLLVSLW*YPAEGI Trigger: TATGCCTTCTGCTGGATACAACCAAAGTGACACTAA...AAGTCGTCTTCCTGCCAGGAGGTGGTAGGTACTACAGGGTCCCACAGCACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR-3UTR CAA 90 bp | TACAAAGAGACAATCAACACCACCAACGTGCCCTCTGACCCCCGTGTGTGCTCTTATCAGTGGTCGTTTTaGGTTCTGCTGTCAGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YKETINTTNVPSDPRVCSYQWSF*VLLSVS Trigger: AGAAACTGACAGCAGAACCAAAAACGACCACTGATA...AGAGCACACACGGGGGTCAGAGGGCACGTTGGTGGTGTTGATTGTCTCTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGGGGTACTGGAATGGAAATAATGCATaGGGAGCAACACAAAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: RPSSATYAARDTSSWGYWNGNNA*GATQNG Trigger: TCCATTTTGTGTTGCTCCCAATGCATTATTTCCATT...CCAGTACCCCCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183059.2 |
||
| 3UTR CCA 72 bp | GTGTGTGCTCTGTGGCATGCGCACTCCACCACAACATaGACACACTGGGAAAAGACTCAACAAACAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VCALWHAHSTTT*THWEKTQQTNK Trigger: TTTGTTTGTTTGTTGAGTCTTTTCCCAGTGTGTCCATGTTGTGGTGGAGTGCGCATGCCACAGAGCACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| 3UTR CCA 72 bp | TCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTaGGGGTACTGGTTAGTTCATATTGTTGTTCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: SSATYAARDTSS*GYWLVHIVVPP Trigger: AGGTGGAACAACAATATGAACTAACCAGTACCCCCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171802.8 ENSMUST00000183059.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGTTCAGTTCCCAGCAACCATATGGTACTCACACCCATCTATAATGGAACCTTTGTCTCCATGGGGTaGGAGAGATGGCTCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSSVPSNHMVLTPIYNGTFVSMG*ERWLRG Trigger: ACCTCTGAGCCATCTCTCCAACCCCATGGAGACAAA...GGTTCCATTATAGATGGGTGTGAGTACCATATGGTTGCTGGGAACTGAACTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| 3UTR CCA 72 bp | ATATCAGTGGTCGTTTTTGGTTCTGCTGTCAGTTTCTaGATTAGGTTCCTCCCTGAGCTCCTACCCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ISVVVFGSAVSF*IRFLPELLPLS Trigger: AGACAAGGGTAGGAGCTCAGGGAGGAACCTAATCCAGAAACTGACAGCAGAACCAAAAACGACCACTGATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| 3UTR-3UTR CAA 90 bp | GTACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTTGTGGCAATAAACTGTaGGAGCTGCTGTTGGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: VLSSFTFPKLSQKSPMPSCGNKL*ELLLAL Trigger: CAGTGCCAACAGCAGCTCCAACAGTTTATTGCCACA...AGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183059.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTCCCATCCACTTCTGTGTTaGCTAGGCCCGAAAGGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: TFFIYISKAIPKVPHALSHPLLC*LGPKGN Trigger: ATTACCTTTCGGGCCTAGCAAACACAGAAGTGGATG...GGAGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171802.8 ENSMUST00000183059.2 |
||
| 3UTR CCA 72 bp | GTAAGGACACTTGCCCAGCAACTTGGGTCCAATCCCTaGAACACATGTAAAGGTACAAAGAGACAATCAACA | + |
|
Preference number: 3 (lower is better) Translates to: VRTLAQQLGSNP*NTCKGTKRQST Trigger: TGTTGATTGTCTCTTTGTACCTTTACATGTGTTCCAGGGATTGGACCCAAGTTGCTGGGCAAGTGTCCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| 3UTR CCA 72 bp | CTGTGGCATGCGCACTCCACCACAACATGGACACACTaGGAAAAGACTCAACAAACAAACAAACAAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LWHAHSTTTWTH*EKTQQTNKQTK Trigger: TTTTGTTTGTTTGTTTGTTTGTTGAGTCTTTTCCCAGTGTGTCCATGTTGTGGTGGAGTGCGCATGCCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| 3UTR GCA 72 bp | CATTCTCGTAGTAAAATAAACTCGTCTTTCATGAGCTaGGGACTTTTTGTCAATGCAATCCTGATGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HSRSKINSSFMS*GLFVNAILMAG Trigger: GCCAGCCATCAGGATTGCATTGACAAAAAGTCCGCAGCTCATGAAAGACGAGTTTATTTTACTACGAGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR CCA 72 bp | CTCACACCCATCTATAATGGAACCCAATACCTTTTCTaGTGTGCAGGAATACATGCAGACAAAGCACTCATA | + |
|
Preference number: 3 (lower is better) Translates to: LTPIYNGTQYLF*CAGIHADKALI Trigger: TATGAGTGCTTTGTCTGCATGTATTCCTGCACACCAGAAAAGGTATTGGGTTCCATTATAGATGGGTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| 3UTR CCA 72 bp | TTTCCAAAGGTTCTAGTTCAGTTCCCAGCAACCATATaGTACTCACACCCATCTATAATGGAACCCAATACC | + |
|
Preference number: 3 (lower is better) Translates to: FPKVLVQFPATI*YSHPSIMEPNT Trigger: GGTATTGGGTTCCATTATAGATGGGTGTGAGTACCATATGGTTGCTGGGAACTGAACTAGAACCTTTGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCTTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGATATATACTGGAGTTTTaGATGTCAAGCTCCTTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SSLKIQHSDDLGLCKGWGYILEF*MSSSLV Trigger: TACCAAGGAGCTTGACATCAAAAACTCCAGTATATA...TCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR CCA 72 bp | GGTATGTTGGTAGGTAAAGTGTTGCTACCTGATGGGTaGAATGAACAAAACCTTTTTCACACTACAATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GMLVGKVLLPDG*NEQNLFHTTMF Trigger: GAACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGGTAGCAACACTTTACCTACCAACATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR GCA 72 bp | AGAAAAGCCTTACATAGGCACTTTGGGTCATTAAGTTaGACTGACTTGAACTCATCACTGGTAATTAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: RKALHRHFGSLS*TDLNSSLVINE Trigger: CTCATTAATTACCAGTGATGAGTTCAAGTCAGTGCAACTTAATGACCCAAAGTGCCTATGTAAGGCTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR TCA 72 bp | GTACGAGGAAACAAGGAGATAAAATCTTATAACAGATaGTGTGGAGACTGCATAGGAGAAACATCAACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VRGNKEIKSYNR*CGDCIGETSTF Trigger: GAAAGTTGATGTTTCTCCTATGCAGTCTCCACATCATCTGTTATAAGATTTTATCTCCTTGTTTCCTCGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| 3UTR GCA 72 bp | AGGCAAGTCTTGTTTGTATGTACTATATCATTAACTTaGTGTTCAGATCAAGTACCAAAATACAAGGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RQVLFVCTISLT*CSDQVPKYKVL Trigger: CAGCACCTTGTATTTTGGTACTTGATCTGAACAGCAAGTTAATGATATAGTACATACAAACAAGACTTGCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR TCA 72 bp | ATAACAAACCGGAAACAGAAATCCTCTAAATCGAAGTaGCACAAATGTTATACAAGAGTGTTTACAGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ITNRKQKSSKSK*HKCYTRVFTGY Trigger: ATACCCTGTAAACACTCTTGTATAACATTTGTGTCACTTCGATTTAGAGGATTTCTGTTTCCGGTTTGTTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| 3UTR CAA 72 bp | TGTTCCACCTATAGGGTTGCAGACCCCTTCAGCTCCTaGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVADPFSS*GTFSSSSIGGP Trigger: AGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGGTCTGCAACCCTATAGGTGGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171802.8 ENSMUST00000183059.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACCACTGCCGGCCTGAATaGTCACTGCTCCTGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSHFLALAFPCTEAYKVYHCRPE*SLLLFH Trigger: ATGGAACAGGAGCAGTGAGCATTCAGGCCGGCAGTG...GTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGTGCTGTGGGACCCTGTAGTACCTACCACCTCCTGGCAGGAAGACGACTTCCCCGTATCTCAGTGTaGGAGAGATTTCCAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: QGAVGPCSTYHLLAGRRLPRISV*ERFPTT Trigger: TGTTGTTGGAAATCTCTCTCACACTGAGATACGGGG...AAGTCGTCTTCCTGCCAGGAGGTGGTAGGTACTACAGGGTCCCACAGCACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR GCA 90 bp | TGGGACCCTGTAGTACCTACCACCTCCTGGCAGGAAGACGACTTGACCCCAGGAAAGATAGACAAGGGCTaGCTCTTTCATCTGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WDPVVPTTSWQEDDLTPGKIDKG*LFHLKS Trigger: ACTCTTCAGATGAAAGAGGCAGCCCTTGTCTATCTT...TCCTGGGGTCAAGTCGTCTTCCTGCCAGGAGGTGGTAGGTACTACAGGGTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | CAACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGGGGTACAGAGAGCAGTTTGTaGAGTTTTGACACAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLGHLLLHMQPETRAPGGTESSL*SFDTDW Trigger: CCAGTCTGTGTCAAAACTTCACAAACTGCTCTCTGT...ACCCCCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR TCA 90 bp | AGATCAAGTACCAAAATACAAGGTGCTGTGGGACCCTGTAGTACCTACCACCTCAAAGCACTGCCGGCCTaGATGCTCACTGCTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSSTKIQGAVGPCSTYHLKALPA*MLTAPV Trigger: AACAGGAGCAGTGAGCATTCAGGCCGGCAGTGCTTT...GAGGTGGTAGGTACTACAGGGTCCCACAGCACCTTGTATTTTGGTACTTGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGGGGTACTGGGGCCTGAATGCTCACTaGTCCTGTTCCATATTTATT | + |
|
Preference number: 4 (lower is better) Translates to: RPSSATYAARDTSSWGYWGLNAH*SCSIFI Trigger: AATAAATATGGAACAGGAGCAGTGAGCATTCAGGCC...CCAGTACCCCCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR GCA 90 bp | TCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGCAAGGCTGCGATGAGTaGGTCTTCTCTGAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHFLALAFPCTEAYKVYKQGCDE*VFSEHC Trigger: ACAGTGCTCAGAGAAGACGCACTCATCGCAGCCTTG...CTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| 3UTR CAA 72 bp | AGCATTCAGGGGTCAGAAGCTGGCAGATCTTTGAGTTaGAGGCCAGCCTGTTCTACAGAGCTAGTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIQGSEAGRSLS*RPACSTELVPG Trigger: TCCTGGAACTAGCTCTGTAGAACAGGCTGGCCTCAAACTCAAAGATCTGCCAGCTTCTGACCCCTGAATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| 3UTR CAA 72 bp | CCTGTAGTACCTACCACCTCCTGGCAGGAAGACGACTaGACCCCAGGAATGTTGTCTTTAGTGTCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVVPTTSWQEDD*TPGMLSLVSLW Trigger: CCAAAGTGACACTAAAGACAACATTCCTGGGGTCAAGTCGTCTTCCTGCCAGGAGGTGGTAGGTACTACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | CCAACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGGGGCAGTTTGTGAAGTTTTaGCACAGACTGGAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTRPSSATYAARDTSSWGQFVKF*HRLEFQ Trigger: TTGGAATTCCAGTCTGTGTCAAAACTTCACAAACTG...CCCCCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CCA 90 bp | CAACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGGGGTCCCAAACTTCTTTCCTaGGATGAATACTGTAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLGHLLLHMQPETRAPGGPKLLS*DEYCNA Trigger: AGCGTTACAGTATTCATCCCAGGAAAGAAGTTTGGG...ACCCCCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTCCAAAGCACTGCCGGCCTaGATGCTCACTGCTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TFFIYISKAIPKVPHALSKALPA*MLTAPV Trigger: AACAGGAGCAGTGAGCATTCAGGCCGGCAGTGCTTT...GGAGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCAACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGCTCTCCAAAGCTGATTaGAGCTGTTCAAGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: WPTRPSSATYAARDTSSWLSKAD*SCSSLS Trigger: AGATAAACTTGAACAGCTTCAATCAGCTTTGGAGAG...CCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTTGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTCAGAAGCTGGCAGATCTTTGAGTTTGAGGCCAGCCTGTTCTACAGAGCTGTCATTTCTTACTGTTaGAGATTCTGTAGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVRSWQIFEFEASLFYRAVISYC*RFCSSR Trigger: CCTGGAGCTACAGAATCTGCAACAGTAAGAAATGAC...AGCTCTGTAGAACAGGCTGGCCTCAAACTCAAAGATCTGCCAGCTTCTGACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACTCGTCTATAAACTTTTaGAGGCCTCCACTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSHFLALAFPCTEAYKVYSSINF*RPPLLS Trigger: TGACAGAAGTGGAGGCCTCCAAAAGTTTATAGACGA...GTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| 3UTR CAA 72 bp | AGTCTTAGCATTCAGGGGTCAGAAGCTGGCAGATCTTaGAGTTTGAGGCCAGCCTGTTCTACAGAGCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSIQGSEAGRS*SLRPACSTELV Trigger: AACTAGCTCTGTAGAACAGGCTGGCCTCAAACTCAAAGATCTGCCAGCTTCTGACCCCTGAATGCTAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | CAGGGGTCAGAAGCTGGCAGATCTTTGAGTTTGAGGCCAGCCTGTTCTACAGAGAGCATAACTCTGCTTTaGATCATTGTAGGACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGSEAGRSLSLRPACSTESITLL*IIVGLA Trigger: TGCAAGTCCTACAATGATTCAAAGCAGAGTTATGCT...CTCTGTAGAACAGGCTGGCCTCAAACTCAAAGATCTGCCAGCTTCTGACCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | CCAAAATACAAGGTGCTGTGGGACCCTGTAGTACCTACCACCTCCTGGCAGGAAAGCATAACTCTGCTTTaGATCATTGTAGGACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKYKVLWDPVVPTTSWQESITLL*IIVGLA Trigger: TGCAAGTCCTACAATGATTCAAAGCAGAGTTATGCT...TTCCTGCCAGGAGGTGGTAGGTACTACAGGGTCCCACAGCACCTTGTATTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | GGGTCAGAAGCTGGCAGATCTTTGAGTTTGAGGCCAGCCTGTTCTACAGAGCTAGGATGGTGTAAAATGTaGTTTCCAAGGTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GSEAGRSLSLRPACSTELGWCKM*FPRSAS Trigger: AGATGCTGACCTTGGAAATCACATTTTACACCATCC...TAGCTCTGTAGAACAGGCTGGCCTCAAACTCAAAGATCTGCCAGCTTCTGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | TGCTCTGTGGCATGCGCACTCCACCACAACATGGACACACTGGGAAAAGACTCAAAGAACCTTGCACCTTaGGTGTACTTGGTTATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSVACALHHNMDTLGKDSKNLAP*VYLVIV Trigger: AACTATAACCAAGTACACTCAAGGTGCAAGGTTCTT...TGAGTCTTTTCCCAGTGTGTCCATGTTGTGGTGGAGTGCGCATGCCACAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| CDS-3UTR TCA 90 bp | GTGGTGCATGCCTTAAGTCTTAGCATTCAGGGGTCAGAAGCTGGCAGATCTTTGAGCAACAAAGCAGACTaGTTGAAAAACTCGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVHALSLSIQGSEAGRSLSNKAD*LKNSSS Trigger: GCTGCTCGAGTTTTTCAATCAGTCTGCTTTGTTGCT...CAAAGATCTGCCAGCTTCTGACCCCTGAATGCTAAGACTTAAGGCATGCACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | TCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGAGCAACAAAGCAGACTaGTTGAAAAACTCGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHFLALAFPCTEAYKVYKSNKAD*LKNSSS Trigger: GCTGCTCGAGTTTTTCAATCAGTCTGCTTTGTTGCT...CTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGCTTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGACACTGCCGGCCTGAATaGTCACTGCTCCTGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLKIQHSDDLGLCKGWGHCRPE*SLLLFH Trigger: ATGGAACAGGAGCAGTGAGCATTCAGGCCGGCAGTG...TCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR GCA 90 bp | CGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGGGCCTCTCTTTCTGGGTGGCAAGGAGATaGCTCACTGCAGTTAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPVLRHIKFTRPMGLSFWVARR*LTAVNQ Trigger: CTGATTAACTGCAGTGAGGCATCTCCTTGCCACCCA...GAAAGAGAGGCCCATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGTGCTGTGGGACCCTGTAGTACCTACCACCTCCTGGCAGGAAGACGACTTATGAATCATTCTTTCTaGTTCCAAGCTGAATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGAVGPCSTYHLLAGRRLMNHSF*FQAEFH Trigger: ATGGAATTCAGCTTGGAAGCAGAAAGAATGATTCAT...AAGTCGTCTTCCTGCCAGGAGGTGGTAGGTACTACAGGGTCCCACAGCACCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CCA 90 bp | GGGTCAGAAGCTGGCAGATCTTTGAGTTTGAGGCCAGCCTGTTCTACAGAGCTATCGTCTATAAACTTTTaGAGGCCTCCACTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSEAGRSLSLRPACSTELSSINF*RPPLLS Trigger: TGACAGAAGTGGAGGCCTCCAAAAGTTTATAGACGA...TAGCTCTGTAGAACAGGCTGGCCTCAAACTCAAAGATCTGCCAGCTTCTGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CCA 90 bp | ACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTCCGTAGGAAGAAGTGGGTaGCAAGGAGATGCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TFFIYISKAIPKVPHALSVGRSG*QGDASL Trigger: CAGTGAGGCATCTCCTTGCCACCCACTTCTTCCTAC...GGAGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR TCA 90 bp | GAGATGGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTTCAGAGGAGCAACAATCTGTaGTGCAAAGACATTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EMAQRLRALVAFPKVLVQRSNNL*CKDIGQ Trigger: CTGGCCAATGTCTTTGCATCACAGATTGTTGCTCCT...CTGAACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCCATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | CGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGGGCCTCTCTTTCAGGAGCAACAATCTGTaGTGCAAAGACATTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPVLRHIKFTRPMGLSFRSNNL*CKDIGQ Trigger: CTGGCCAATGTCTTTGCATCACAGATTGTTGCTCCT...GAAAGAGAGGCCCATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR GCA 90 bp | TGGCCAACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGATGAATCATTCTTTCTaGTTCCAAGCTGAATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WPTRPSSATYAARDTSSWMNHSF*FQAEFH Trigger: ATGGAATTCAGCTTGGAAGCAGAAAGAATGATTCAT...CCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTTGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGCTTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGACAAGGCTGCGATGAGTaGGTCTTCTCTGAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLKIQHSDDLGLCKGWGQGCDE*VFSEHC Trigger: ACAGTGCTCAGAGAAGACGCACTCATCGCAGCCTTG...TCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CCA 90 bp | ACATGGAAGGCAGCTGAGCCAGACACAGAGAGCAAGTCAGATATCAGTGGTCGTGGAACTTTTGCTGTGTaGGGAGTGATATTATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWKAAEPDTESKSDISGRGTFAV*GVILFA Trigger: AGCAAATAATATCACTCCCCACACAGCAAAAGTTCC...ACGACCACTGATATCTGACTTGCTCTCTGTGTCTGGCTCAGCTGCCTTCCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| CDS-3UTR CCA 90 bp | TCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGGACCAATCAGAGTACTaGTTTTCTGCACATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHFLALAFPCTEAYKVYKDQSEY*FSAHFS Trigger: GGAGAAATGTGCAGAAAACCAGTACTCTGATTGGTC...CTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CCA 90 bp | CATGAGCTGCGGACTTTTTGTCAATGCAATCCTGATGGCTGGCTAGTAAGTAGCATGCCTCTGCAAGGTTaGCTGGAATCAAACTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HELRTFCQCNPDGWLVSSMPLQG*LESNCN Trigger: ATTGCAGTTTGATTCCAGCCAACCTTGCAGAGGCAT...GCTACTTACTAGCCAGCCATCAGGATTGCATTGACAAAAAGTCCGCAGCTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CCA 90 bp | GTACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTGGGAGCAACACAAAATaGAGTGGCCCCGTATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLSSFTFPKLSQKSPMPSGSNTK*SGPVSQ Trigger: CTGAGATACGGGGCCACTCCATTTTGTGTTGCTCCC...AGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR TCA 90 bp | GAGATGGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTTCAGACAGAGAGCAGTTTGTaGAGTTTTGACACAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EMAQRLRALVAFPKVLVQTESSL*SFDTDW Trigger: CCAGTCTGTGTCAAAACTTCACAAACTGCTCTCTGT...CTGAACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCCATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGATGGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTACAGAGAGCAGTTTGTaGAGTTTTGACACAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WRDGSEVKSTGCFSKGSSTESSL*SFDTDW Trigger: CCAGTCTGTGTCAAAACTTCACAAACTGCTCTCTGT...ACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCCATCTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTCCCCCCGTATCTCAGTGTaGGAGAGATTTCCAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: TFFIYISKAIPKVPHALSPRISV*ERFPTT Trigger: TGTTGTTGGAAATCTCTCTCACACTGAGATACGGGG...GGAGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
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| CDS-3UTR CCA 90 bp | CATGAGCTGCGGACTTTTTGTCAATGCAATCCTGATGGCTGGCTAGTAAGTAGCCCCAAACTTCTTTCCTaGGATGAATACTGTAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: HELRTFCQCNPDGWLVSSPKLLS*DEYCNA Trigger: AGCGTTACAGTATTCATCCCAGGAAAGAAGTTTGGG...GCTACTTACTAGCCAGCCATCAGGATTGCATTGACAAAAAGTCCGCAGCTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATATGCCTCTGCAAGGTTaGCTGGAATCAAACTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLALAFPCTEAYKVYKTNMPLQG*LESNCN Trigger: ATTGCAGTTTGATTCCAGCCAACCTTGCAGAGGCAT...ATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
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| CDS-3UTR CCA 90 bp | CCTGATGGGTGGAATGAACAAAACCTTTTTCACACTACAATGTTCTCTACTGTGGGGAGCAACACAAAATaGAGTGGCCCCGTATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDGWNEQNLFHTTMFSTVGSNTK*SGPVSQ Trigger: CTGAGATACGGGGCCACTCCATTTTGTGTTGCTCCC...CACAGTAGAGAACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | TCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGATACTGAAATCCTTTTaGAAGAGGACACACTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SWPWRSPVLRHIKFTRPMILKSF*KRTHSI Trigger: GATGGAGTGTGTCCTCTTTCAAAAGGATTTCAGTAT...CATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTTCAGTTCCCCAGTTTGTGAAGTTTTaGCACAGACTGGAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSEVKSTGCFSKGSSSVPQFVKF*HRLEFQ Trigger: TTGGAATTCCAGTCTGTGTCAAAACTTCACAAACTG...GGGAACTGAACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | GCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGGGCCTCTCTTTTCTGCTCTCCAAAGCTaGTTGAAGCTGTTCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AFPCTEAYKVYKTNGPLFSALQS*LKLFKF Trigger: AAACTTGAACAGCTTCAATCAGCTTTGGAGAGCAGA...AAAGAGAGGCCCATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR TCA 90 bp | TCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGTTTCTGCTTCCAAGCTaGATTCCATATTCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHFLALAFPCTEAYKVYKFLLPS*IPYSNS Trigger: AGAGTTTGAATATGGAATTCAGCTTGGAAGCAGAAA...CTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGATGGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTTAAGATAGACAAGGGCTaGCTCTTTCATCTGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEMAQRLRALVAFPKVLVKIDKG*LFHLKS Trigger: ACTCTTCAGATGAAAGAGGCAGCCCTTGTCTATCTT...AACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCCATCTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
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| CDS-3UTR GCA 90 bp | TCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGAGAGTACTGGTTTTCTaGACATTTCTCCTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHFLALAFPCTEAYKVYKRVLVF*TFLLED Trigger: ATCTTCAAGGAGAAATGTGCAGAAAACCAGTACTCT...CTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
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| CDS-3UTR GCA 90 bp | CGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGGGCCTCTCTTTCTGGCTGGAATCAAACTaGAATCCATCTGACCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: RSPVLRHIKFTRPMGLSFWLESN*NPSDQS Trigger: TGATTGGTCAGATGGATTGCAGTTTGATTCCAGCCA...GAAAGAGAGGCCCATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTCCCTCTGCAAGGTTGGCTaGAATCAAACTGCAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TFFIYISKAIPKVPHALSLCKVG*NQTAIH Trigger: ATGGATTGCAGTTTGATTCCAGCCAACCTTGCAGAG...GGAGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
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| CDS-3UTR CCA 90 bp | TTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGAAGTTTAGTAGGAAGAAGTGGGTaGCAAGGAGATGCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LKIQHSDDLGLCKGWGSLVGRSG*QGDASL Trigger: CAGTGAGGCATCTCCTTGCCACCCACTTCTTCCTAC...TAAACTTCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | CGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGGGCCTCTCTTTCAGCATAACTCTGCTTTaGATCATTGTAGGACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSPVLRHIKFTRPMGLSFSITLL*IIVGLA Trigger: TGCAAGTCCTACAATGATTCAAAGCAGAGTTATGCT...GAAAGAGAGGCCCATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGATGGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTTAAGAACCTTGCACCTTaGGTGTACTTGGTTATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GEMAQRLRALVAFPKVLVKNLAP*VYLVIV Trigger: AACTATAACCAAGTACACTCAAGGTGCAAGGTTCTT...AACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCCATCTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
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| CDS-3UTR TCA 90 bp | TGGAGAGATGGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTATACTGAAATCCTTTTaGAAGAGGACACACTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: WRDGSEVKSTGCFSKGSSILKSF*KRTHSI Trigger: GATGGAGTGTGTCCTCTTTCAAAAGGATTTCAGTAT...ACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCCATCTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
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| CDS-3UTR TCA 90 bp | TCTATAATGGAACCCAATACCTTTTCTGGTGTGCAGGAATACATGCAGACAAAGAGGAGCAACAATCTGTaGTGCAAAGACATTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIMEPNTFSGVQEYMQTKRSNNL*CKDIGQ Trigger: CTGGCCAATGTCTTTGCATCACAGATTGTTGCTCCT...CTTTGTCTGCATGTATTCCTGCACACCAGAAAAGGTATTGGGTTCCATTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGTTGCTACCTGATGGGTGGAATGAACAAAACCTTTTTCACACTACAATGTTGGGTGGCAAGGAGATaGCTCACTGCAGTTAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCCYLMGGMNKTFFTLQCWVARR*LTAVNQ Trigger: CTGATTAACTGCAGTGAGGCATCTCCTTGCCACCCA...ACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGGTAGCAACACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR GCA 90 bp | TCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGAATCTGTTCTTATTCTaGGACTTGCTAGATAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHFLALAFPCTEAYKVYKNLFLF*DLLDNS Trigger: GCTATTATCTAGCAAGTCGCAGAATAAGAACAGATT...CTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGCTTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGACTCTGCAAGGTTGGCTaGAATCAAACTGCAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLKIQHSDDLGLCKGWGLCKVG*NQTAIH Trigger: ATGGATTGCAGTTTGATTCCAGCCAACCTTGCAGAG...TCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | TCTAGTTCAGTTCCCAGCAACCATATGGTACTCACACCCATCTATAATGGAACCAGCATAACTCTGCTTTaGATCATTGTAGGACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSVPSNHMVLTPIYNGTSITLL*IIVGLA Trigger: TGCAAGTCCTACAATGATTCAAAGCAGAGTTATGCT...GGTTCCATTATAGATGGGTGTGAGTACCATATGGTTGCTGGGAACTGAACTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTCCAAGAACCTTGCACCTTaGGTGTACTTGGTTATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TFFIYISKAIPKVPHALSKNLAP*VYLVIV Trigger: AACTATAACCAAGTACACTCAAGGTGCAAGGTTCTT...GGAGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR TCA 90 bp | CCTGATGGGTGGAATGAACAAAACCTTTTTCACACTACAATGTTCTCTACTGTGACAGAGAGCAGTTTGTaGAGTTTTGACACAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PDGWNEQNLFHTTMFSTVTESSL*SFDTDW Trigger: CCAGTCTGTGTCAAAACTTCACAAACTGCTCTCTGT...CACAGTAGAGAACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR GCA 90 bp | GTACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTAAGATAGACAAGGGCTaGCTCTTTCATCTGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLSSFTFPKLSQKSPMPSKIDKG*LFHLKS Trigger: ACTCTTCAGATGAAAGAGGCAGCCCTTGTCTATCTT...AGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGAAAAACTGCACTGAATaGGAAAAGTCATTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWPWRSPVLRHIKFTRPMKNCTE*EKSFAD Trigger: ATCAGCAAATGACTTTTCCCATTCAGTGCAGTTTTT...CATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| 3UTR CAA 72 bp | AATGAGCTCAAGCTGGGTATGTTGGTAGGTAAAGTGTaGCTACCTGATGGGTGGAATGAACAAAACCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NELKLGMLVGKV*LPDGWNEQNLF Trigger: AAAAAGGTTTTGTTCATTCCACCCATCAGGTAGCAACACTTTACCTACCAACATACCCAGCTTGAGCTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | AGTAGCTTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGACAGTTTGTGAAGTTTTaGCACAGACTGGAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLKIQHSDDLGLCKGWGQFVKF*HRLEFQ Trigger: TTGGAATTCCAGTCTGTGTCAAAACTTCACAAACTG...TCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | TCTTGGTTTAGATGTTGGGTTAGTTGCAAATTTGTAATTATGAAGGGGCCACATAGGAGCAACAATCTGTaGTGCAAAGACATTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWFRCWVSCKFVIMKGPHRSNNL*CKDIGQ Trigger: CTGGCCAATGTCTTTGCATCACAGATTGTTGCTCCT...ATGTGGCCCCTTCATAATTACAAATTTGCAACTAACCCAACATCTAAACCAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | AAGTGTTGCTACCTGATGGGTGGAATGAACAAAACCTTTTTCACACTACAATGTAGCAACAAAGCAGACTaGTTGAAAAACTCGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KCCYLMGGMNKTFFTLQCSNKAD*LKNSSS Trigger: GCTGCTCGAGTTTTTCAATCAGTCTGCTTTGTTGCT...ACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGGTAGCAACACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR GCA 90 bp | TATAATGGAACCCAATACCTTTTCTGGTGTGCAGGAATACATGCAGACAAAGCAAAGATAGACAAGGGCTaGCTCTTTCATCTGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YNGTQYLFWCAGIHADKAKIDKG*LFHLKS Trigger: ACTCTTCAGATGAAAGAGGCAGCCCTTGTCTATCTT...TGCTTTGTCTGCATGTATTCCTGCACACCAGAAAAGGTATTGGGTTCCATTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR GCA 90 bp | CCTGATGGGTGGAATGAACAAAACCTTTTTCACACTACAATGTTCTCTACTGTGGGCCTGAATGCTCACTaGTCCTGTTCCATATTTATT | + |
|
Preference number: 4 (lower is better) Translates to: PDGWNEQNLFHTTMFSTVGLNAH*SCSIFI Trigger: AATAAATATGGAACAGGAGCAGTGAGCATTCAGGCC...CACAGTAGAGAACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGAAGGGAAGCCAACAACAGGAAAGTTAGTTATGGTGATAAGTGGAAGAAATCGTCTATAAACTTTTaGAGGCCTCCACTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGREANNRKVSYGDKWKKSSINF*RPPLLS Trigger: TGACAGAAGTGGAGGCCTCCAAAAGTTTATAGACGA...TTTCTTCCACTTATCACCATAACTAACTTTCCTGTTGTTGGCTTCCCTTCCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| CDS-3UTR TCA 90 bp | TATAATGGAACCCAATACCTTTTCTGGTGTGCAGGAATACATGCAGACAAAGCAATACTGAAATCCTTTTaGAAGAGGACACACTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: YNGTQYLFWCAGIHADKAILKSF*KRTHSI Trigger: GATGGAGTGTGTCCTCTTTCAAAAGGATTTCAGTAT...TGCTTTGTCTGCATGTATTCCTGCACACCAGAAAAGGTATTGGGTTCCATTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | CCTGATGGGTGGAATGAACAAAACCTTTTTCACACTACAATGTTCTCTACTGTGATACTGAAATCCTTTTaGAAGAGGACACACTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PDGWNEQNLFHTTMFSTVILKSF*KRTHSI Trigger: GATGGAGTGTGTCCTCTTTCAAAAGGATTTCAGTAT...CACAGTAGAGAACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | TATAATGGAACCCAATACCTTTTCTGGTGTGCAGGAATACATGCAGACAAAGCACAGTTTGTGAAGTTTTaGCACAGACTGGAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YNGTQYLFWCAGIHADKAQFVKF*HRLEFQ Trigger: TTGGAATTCCAGTCTGTGTCAAAACTTCACAAACTG...TGCTTTGTCTGCATGTATTCCTGCACACCAGAAAAGGTATTGGGTTCCATTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGTTGCTACCTGATGGGTGGAATGAACAAAACCTTTTTCACACTACAATGTTCTGCTCTCCAAAGCTaGTTGAAGCTGTTCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCCYLMGGMNKTFFTLQCSALQS*LKLFKF Trigger: AAACTTGAACAGCTTCAATCAGCTTTGGAGAGCAGA...ACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGGTAGCAACACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGCTTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGAAGAGTACTGGTTTTCTaGACATTTCTCCTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLKIQHSDDLGLCKGWGRVLVF*TFLLED Trigger: ATCTTCAAGGAGAAATGTGCAGAAAACCAGTACTCT...TCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR GCA 90 bp | TTTAACTGGCTTAACAAGGCACAAAGCTCTGGATTTGATTCCCAGGATAGAAATTGGCTGGAATCAAACTaGAATCCATCTGACCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: FNWLNKAQSSGFDSQDRNWLESN*NPSDQS Trigger: TGATTGGTCAGATGGATTGCAGTTTGATTCCAGCCA...ATTTCTATCCTGGGAATCAAATCCAGAGCTTTGTGCCTTGTTAAGCCAGTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CCA 90 bp | CACTTTGGGTCATTAAGTTGCACTGACTTGAACTCATCACTGGTAATTAATGAGTCGTCTATAAACTTTTaGAGGCCTCCACTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFGSLSCTDLNSSLVINESSINF*RPPLLS Trigger: TGACAGAAGTGGAGGCCTCCAAAAGTTTATAGACGA...CTCATTAATTACCAGTGATGAGTTCAAGTCAGTGCAACTTAATGACCCAAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CCA 90 bp | TTTAACTGGCTTAACAAGGCACAAAGCTCTGGATTTGATTCCCAGGATAGAAATGACCAATCAGAGTACTaGTTTTCTGCACATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FNWLNKAQSSGFDSQDRNDQSEY*FSAHFS Trigger: GGAGAAATGTGCAGAAAACCAGTACTCTGATTGGTC...ATTTCTATCCTGGGAATCAAATCCAGAGCTTTGTGCCTTGTTAAGCCAGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR CAA 72 bp | TTAGTAAGTAGCTTAAAAATTCAACATTCTGATGACTaGGGCCTTTGTAAGGGCTGGGGAAGTTTAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSSLKIQHSDD*GLCKGWGSLTG Trigger: GCCAGTTAAACTTCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACTTACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR CAA 72 bp | TATTCTTCATTATACAGCTCAAATGGAAATAATGCATaGGGAGCAACACAAAATGGAGTGGCCCCGTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSSLYSSNGNNA*GATQNGVAPYL Trigger: GAGATACGGGGCCACTCCATTTTGTGTTGCTCCCAATGCATTATTTCCATTTGAGCTGTATAATGAAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183059.2 |
||
| CDS-3UTR TCA 90 bp | TTTAACTGGCTTAACAAGGCACAAAGCTCTGGATTTGATTCCCAGGATAGAAATCTCTCCAAAGCTGATTaGAGCTGTTCAAGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: FNWLNKAQSSGFDSQDRNLSKAD*SCSSLS Trigger: AGATAAACTTGAACAGCTTCAATCAGCTTTGGAGAG...ATTTCTATCCTGGGAATCAAATCCAGAGCTTTGTGCCTTGTTAAGCCAGTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGCTTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGAAATCTGTTCTTATTCTaGGACTTGCTAGATAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLKIQHSDDLGLCKGWGNLFLF*DLLDNS Trigger: GCTATTATCTAGCAAGTCGCAGAATAAGAACAGATT...TCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR CAA 72 bp | GTAGAGGCTTTGTCTAGCATATACCAAGTCCTAGTATaGATCCCTATCACCAAAATGTTAAAACAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VEALSSIYQVLV*IPITKMLKQSS Trigger: ACTGCTCTGTTTTAACATTTTGGTGATAGGGATCAATACTAGGACTTGGTATATGCTAGACAAAGCCTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| 3UTR CAA 72 bp | AGTTTAACTGGCTTAACAAGGCACAAAGCTCTGGATTaGATTCCCAGGATAGAAATTTCGAACATTAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLTGLTRHKALD*IPRIEISNIRL Trigger: AAGCCTAATGTTCGAAATTTCTATCCTGGGAATCAAATCCAGAGCTTTGTGCCTTGTTAAGCCAGTTAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | TCTTGGTTTAGATGTTGGGTTAGTTGCAAATTTGTAATTATGAAGGGGCCACATAAGAACCTTGCACCTTaGGTGTACTTGGTTATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SWFRCWVSCKFVIMKGPHKNLAP*VYLVIV Trigger: AACTATAACCAAGTACACTCAAGGTGCAAGGTTCTT...ATGTGGCCCCTTCATAATTACAAATTTGCAACTAACCCAACATCTAAACCAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR TCA 90 bp | AAGTGTTGCTACCTGATGGGTGGAATGAACAAAACCTTTTTCACACTACAATGTTTTCTGCTTCCAAGCTaGATTCCATATTCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCCYLMGGMNKTFFTLQCFLLPS*IPYSNS Trigger: AGAGTTTGAATATGGAATTCAGCTTGGAAGCAGAAA...ACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGGTAGCAACACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGGTTTAGATGTTGGGTTAGTTGCAAATTTGTAATTATGAAGGGGCCACATAAAAACTGCACTGAATaGGAAAAGTCATTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWFRCWVSCKFVIMKGPHKNCTE*EKSFAD Trigger: ATCAGCAAATGACTTTTCCCATTCAGTGCAGTTTTT...ATGTGGCCCCTTCATAATTACAAATTTGCAACTAACCCAACATCTAAACCAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| 3UTR CAA 72 bp | TTGAAACTCTCAAACTGGATTTCCTCGAGTGAAGACTaGGCTAAATCTTTAACCAATAGAATCCCTAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKLSNWISSSED*AKSLTNRIPKF Trigger: AAACTTAGGGATTCTATTGGTTAAAGATTTAGCCAAGTCTTCACTCGAGGAAATCCAGTTTGAGAGTTTCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CAA 90 bp | CAAGGTGCTGTGGGACCCTGTAGTACCTACCACCTCCTGGCAGGAAGACGACTTCTGTTGGAGCTGCTGTaGGCACTGAGTCAGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGAVGPCSTYHLLAGRRLLLELL*ALSQVE Trigger: CTCTACCTGACTCAGTGCCAACAGCAGCTCCAACAG...AAGTCGTCTTCCTGCCAGGAGGTGGTAGGTACTACAGGGTCCCACAGCACCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS GCA 90 bp | AAGTACAGCAGCCCCTCAGGCTCCACTGCTTTCTTTAAAGTGTGCTaGACAGTAGGAAGAAGTGGGTGGCAAGGAGATGCCTCACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KYSSPSGSTAFFKVC*TVGRSGWQGDASLQ Trigger: CTGCAGTGAGGCATCTCCTTGCCACCCACTTCTTCCTACTGTGCAGCACACTTTAAAGAAAGCAGTGGAGCCTGAGGGGCTGCTGTACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
||
| CDS GCA 90 bp | GCTAAGTACAGCAGCCCCTCAGGCTCCACTGCTTTCTTTAAAGTGTaGTGCACAGTAGGAAGAAGTGGGTGGCAAGGAGATGCCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AKYSSPSGSTAFFKV*CTVGRSGWQGDASL Trigger: CAGTGAGGCATCTCCTTGCCACCCACTTCTTCCTACTGTGCAGCACACTTTAAAGAAAGCAGTGGAGCCTGAGGGGCTGCTGTACTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGGGGTACTGGGATCAAGAGTATAGCTaGGCAGGGCTGGTAAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: RPSSATYAARDTSSWGYWDQEYS*AGLVNV Trigger: CACATTTACCAGCCCTGCCAAGCTATACTCTTGATC...CCAGTACCCCCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CAA 90 bp | CAACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGGGGTGTCGTCTATAAACTTTaGGAGGCCTCCACTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLGHLLLHMQPETRAPGGVVYKL*EASTSV Trigger: GACAGAAGTGGAGGCCTCCAAAAGTTTATAGACGAC...ACCCCCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCAACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGAATGCCTCTGCAAGGTaGGCTGGAATCAAACTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WPTRPSSATYAARDTSSWNASAR*AGIKLQ Trigger: TTGCAGTTTGATTCCAGCCAACCTTGCAGAGGCATT...CCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTTGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGGTCAGAAGCTGGCAGATCTTTGAGTTTGAGGCCAGCCTGTTCTACAGAGGATCAAGAGTATAGCTaGGCAGGGCTGGTAAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSEAGRSLSLRPACSTEDQEYS*AGLVNV Trigger: CACATTTACCAGCCCTGCCAAGCTATACTCTTGATC...CTCTGTAGAACAGGCTGGCCTCAAACTCAAAGATCTGCCAGCTTCTGACCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CAA 90 bp | GGGTCAGAAGCTGGCAGATCTTTGAGTTTGAGGCCAGCCTGTTCTACAGAGCTAGATCAAGAGTATAGCTaGGCAGGGCTGGTAAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSEAGRSLSLRPACSTELDQEYS*AGLVNV Trigger: CACATTTACCAGCCCTGCCAAGCTATACTCTTGATC...TAGCTCTGTAGAACAGGCTGGCCTCAAACTCAAAGATCTGCCAGCTTCTGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CAA 90 bp | TACAAAGAGACAATCAACACCACCAACGTGCCCTCTGACCCCCGTGTGTGCTCTTGTGATGCAAAGACATaGGCCAGCATTGCTGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YKETINTTNVPSDPRVCSCDAKT*ASIAVN Trigger: ATTCACAGCAATGCTGGCCAATGTCTTTGCATCACA...AGAGCACACACGGGGGTCAGAGGGCACGTTGGTGGTGTTGATTGTCTCTTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
||
| CDS-3UTR CAA 90 bp | TGGCCAACTAGGCCATCTTCTGCTACATATGCAGCCAGAGACACGAGCTCCTGGAATGGGAAAAGTCATTaGCTGATCGAAATCATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WPTRPSSATYAARDTSSWNGKSH*LIEIIP Trigger: GGGGATGATTTCGATCAGCAAATGACTTTTCCCATT...CCAGGAGCTCGTGTCTCTGGCTGCATATGTAGCAGAAGATGGCCTAGTTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGTGCTGTGGGACCCTGTAGTACCTACCACCTCCTGGCAGGAAGACGACTTCCATATTCAAACTCTTaGCAAAAGCCAGTAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QGAVGPCSTYHLLAGRRLPYSNS*QKPVAF Trigger: AAAAGCTACTGGCTTTTGCAAAGAGTTTGAATATGG...AAGTCGTCTTCCTGCCAGGAGGTGGTAGGTACTACAGGGTCCCACAGCACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTCAGAAGCTGGCAGATCTTTGAGTTTGAGGCCAGCCTGTTCTACAGAGCTCATACTGAAATCCTTTaGAAAGAGGACACACTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GVRSWQIFEFEASLFYRAHTEIL*KEDTLH Trigger: ATGGAGTGTGTCCTCTTTCAAAAGGATTTCAGTATG...AGCTCTGTAGAACAGGCTGGCCTCAAACTCAAAGATCTGCCAGCTTCTGACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CAA 90 bp | GTACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTCTGTTGGAGCTGCTGTaGGCACTGAGTCAGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLSSFTFPKLSQKSPMPSLLELL*ALSQVE Trigger: CTCTACCTGACTCAGTGCCAACAGCAGCTCCAACAG...AGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CAA 90 bp | GCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGGGCCTCTCTTTTGTGGCAATAAACTGTaGGAGCTGCTGTTGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AFPCTEAYKVYKTNGPLFCGNKL*ELLLAL Trigger: CAGTGCCAACAGCAGCTCCAACAGTTTATTGCCACA...AAAGAGAGGCCCATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS CCA 90 bp | TCCACTGCTTTCTTTAAAGTGTGCTGCACAGTAGGAAGAAGTGGGTaGCAAGGAGATGCCTCACTGCAGTTAATCAGTAATCCAAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: STAFFKVCCTVGRSG*QGDASLQLISNPNA Trigger: GGCATTTGGATTACTGATTAACTGCAGTGAGGCATCTCCTTGCCACCCACTTCTTCCTACTGTGCAGCACACTTTAAAGAAAGCAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGATGGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTGTCGTCTATAAACTTTaGGAGGCCTCCACTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WRDGSEVKSTGCFSKGSSVVYKL*EASTSV Trigger: GACAGAAGTGGAGGCCTCCAAAAGTTTATAGACGAC...ACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCCATCTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CAA 90 bp | GTGGTGCATGCCTTAAGTCTTAGCATTCAGGGGTCAGAAGCTGGCAGATCTTTGCAGCATAACTCTGCTTaGAATCATTGTAGGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVHALSLSIQGSEAGRSLQHNSA*NHCRTC Trigger: GCAAGTCCTACAATGATTCAAAGCAGAGTTATGCTG...CAAAGATCTGCCAGCTTCTGACCCCTGAATGCTAAGACTTAAGGCATGCACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CAA 90 bp | ATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGAAGTTTAACTGGCGATCAAGAGTATAGCTaGGCAGGGCTGGTAAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: IQHSDDLGLCKGWGSLTGDQEYS*AGLVNV Trigger: CACATTTACCAGCCCTGCCAAGCTATACTCTTGATC...GCCAGTTAAACTTCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTGCATGCCTTAAGTCTTAGCATTCAGGGGTCAGAAGCTGGCAGATCTTTGAGGAGACGCCTAAAGTaGTCACTAATTCCTAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVHALSLSIQGSEAGRSLRRRLK*SLIPKG Trigger: TCCTTTAGGAATTAGTGACAACTTTAGGCGTCTCCT...CAAAGATCTGCCAGCTTCTGACCCCTGAATGCTAAGACTTAAGGCATGCACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTTCAGTTCCCTGTGATGCAAAGACATaGGCCAGCATTGCTGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSEVKSTGCFSKGSSSVPCDAKT*ASIAVN Trigger: ATTCACAGCAATGCTGGCCAATGTCTTTGCATCACA...GGGAACTGAACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CAA 90 bp | GCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGGGCCTCTCTTTTGTGATGCAAAGACATaGGCCAGCATTGCTGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: AFPCTEAYKVYKTNGPLFCDAKT*ASIAVN Trigger: ATTCACAGCAATGCTGGCCAATGTCTTTGCATCACA...AAAGAGAGGCCCATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTTAAAAATTCAACATTCTGATGACTTGGGCCTTTGTAAGGGCTGGGGAGTCGTCTATAAACTTTaGGAGGCCTCCACTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLKIQHSDDLGLCKGWGVVYKL*EASTSV Trigger: GACAGAAGTGGAGGCCTCCAAAAGTTTATAGACGAC...TCCCCAGCCCTTACAAAGGCCCAAGTCATCAGAATGTTGAATTTTTAAGCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATGGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTTGCAGTTTGTGAAGTTTaGACACAGACTGGAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GEMAQRLRALVAFPKVLVAVCEV*TQTGIP Trigger: TGGAATTCCAGTCTGTGTCAAAACTTCACAAACTGC...AACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCCATCTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CAA 90 bp | TTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGCAGTTTGTGAAGTTTaGACACAGACTGGAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLALAFPCTEAYKVYKTNAVCEV*TQTGIP Trigger: TGGAATTCCAGTCTGTGTCAAAACTTCACAAACTGC...ATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGATGGCTCAGAGGTTAAGAGCACTGGTTGCTTTTCCAAAGGTTCTAGTAGGAGACGCCTAAAGTaGTCACTAATTCCTAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WRDGSEVKSTGCFSKGSSRRRLK*SLIPKG Trigger: TCCTTTAGGAATTAGTGACAACTTTAGGCGTCTCCT...ACTAGAACCTTTGGAAAAGCAACCAGTGCTCTTAACCTCTGAGCCATCTCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
||
| CDS-3UTR CAA 90 bp | CGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGGGCCTCTCTTTCAGGAGACGCCTAAAGTaGTCACTAATTCCTAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSPVLRHIKFTRPMGLSFRRRLK*SLIPKG Trigger: TCCTTTAGGAATTAGTGACAACTTTAGGCGTCTCCT...GAAAGAGAGGCCCATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
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| CDS-3UTR CAA 90 bp | TCTATAATGGAACCCAATACCTTTTCTGGTGTGCAGGAATACATGCAGACAAAGGTCGTCTATAAACTTTaGGAGGCCTCCACTTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: SIMEPNTFSGVQEYMQTKVVYKL*EASTSV Trigger: GACAGAAGTGGAGGCCTCCAAAAGTTTATAGACGAC...CTTTGTCTGCATGTATTCCTGCACACCAGAAAAGGTATTGGGTTCCATTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
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| CDS-3UTR CAA 90 bp | CAGGAACAGGAAAGGGAAGGGAAGCCAACAACAGGAAAGTTAGTTATGGTGATACAAGAACCTTGCACCTaGAGTGTACTTGGTTATAGT | + |
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Preference number: 5 (lower is better) Translates to: QEQEREGKPTTGKLVMVIQEPCT*SVLGYS Trigger: ACTATAACCAAGTACACTCAAGGTGCAAGGTTCTTG...TATCACCATAACTAACTTTCCTGTTGTTGGCTTCCCTTCCCTTTCCTGTTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| CDS-3UTR CAA 90 bp | TCTAGTTCAGTTCCCAGCAACCATATGGTACTCACACCCATCTATAATGGAACCCAAGAACCTTGCACCTaGAGTGTACTTGGTTATAGT | + |
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Preference number: 5 (lower is better) Translates to: SSSVPSNHMVLTPIYNGTQEPCT*SVLGYS Trigger: ACTATAACCAAGTACACTCAAGGTGCAAGGTTCTTG...GGTTCCATTATAGATGGGTGTGAGTACCATATGGTTGCTGGGAACTGAACTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTCCCAAGAACCTTGCACCTaGAGTGTACTTGGTTATAGT | + |
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Preference number: 5 (lower is better) Translates to: TFFIYISKAIPKVPHALSQEPCT*SVLGYS Trigger: ACTATAACCAAGTACACTCAAGGTGCAAGGTTCTTG...GGAGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
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| CDS-3UTR CAA 90 bp | TCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGCCATATTCAAACTCTTaGCAAAAGCCAGTAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SWPWRSPVLRHIKFTRPMPYSNS*QKPVAF Trigger: AAAAGCTACTGGCTTTTGCAAAGAGTTTGAATATGG...CATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
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| CDS-3UTR CAA 90 bp | TCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTACAAGACCAATGAATGGAAATAATGCATaGGGAGCAACACAAAATGGA | + |
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Preference number: 5 (lower is better) Translates to: SWPWRSPVLRHIKFTRPMNGNNA*GATQNG Trigger: TCCATTTTGTGTTGCTCCCAATGCATTATTTCCATT...CATTGGTCTTGTAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
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| CDS-3UTR CAA 90 bp | AAGTGTTGCTACCTGATGGGTGGAATGAACAAAACCTTTTTCACACTACAATGTAATGCCTCTGCAAGGTaGGCTGGAATCAAACTGCAA | + |
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Preference number: 5 (lower is better) Translates to: KCCYLMGGMNKTFFTLQCNASAR*AGIKLQ Trigger: TTGCAGTTTGATTCCAGCCAACCTTGCAGAGGCATT...ACATTGTAGTGTGAAAAAGGTTTTGTTCATTCCACCCATCAGGTAGCAACACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| CDS-3UTR CAA 90 bp | TCTTGGTTTAGATGTTGGGTTAGTTGCAAATTTGTAATTATGAAGGGGCCACATTGTGGCAATAAACTGTaGGAGCTGCTGTTGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: SWFRCWVSCKFVIMKGPHCGNKL*ELLLAL Trigger: CAGTGCCAACAGCAGCTCCAACAGTTTATTGCCACA...ATGTGGCCCCTTCATAATTACAAATTTGCAACTAACCCAACATCTAAACCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| CDS TCA 90 bp | GGTCAGCATCTAATTCAACAACGTCACAGGGGTCTATTAGAATACTaGACCGATAGACAGCATAACTCTGCTTTGAATCATTGTAGGACT | + |
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Preference number: 5 (lower is better) Translates to: GQHLIQQRHRGLLEY*TDRQHNSALNHCRT Trigger: AGTCCTACAATGATTCAAAGCAGAGTTATGCTGTCTATCGGTTCAGTATTCTAATAGACCCCTGTGACGTTGTTGAATTAGATGCTGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS TCA 90 bp | TTTGAAAGAGGACACACTCCATCTGAACACAAGAACCTTGCACCTTaGGTGTACTTGGTTATAGTTGTCATTGCAATCACAATTCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: FERGHTPSEHKNLAP*VYLVIVVIAITIPC Trigger: GCAAGGAATTGTGATTGCAATGACAACTATAACCAAGTACACTCAAGGTGCAAGGTTCTTGTGTTCAGATGGAGTGTGTCCTCTTTCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS-3UTR CAA 90 bp | GTACTTTCTTCATTTACATTTCCAAAGCTATCCCAAAAGTCCCCCATGCCCTCTCATACTGAAATCCTTTaGAAAGAGGACACACTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLSSFTFPKLSQKSPMPSHTEIL*KEDTLH Trigger: ATGGAGTGTGTCCTCTTTCAAAAGGATTTCAGTATG...AGAGGGCATGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAGAAAGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171802.8 |
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| CDS-3UTR CAA 90 bp | TACTCAAAACATGCAAAACCATCATCGGGAGAAGAACAACAACATAAACCCAGCGCAGTTTGTGAAGTTTaGACACAGACTGGAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YSKHAKPSSGEEQQHKPSAVCEV*TQTGIP Trigger: TGGAATTCCAGTCTGTGTCAAAACTTCACAAACTGC...GCTGGGTTTATGTTGTTGTTCTTCTCCCGATGATGGTTTTGCATGTTTTGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| CDS-3UTR CAA 90 bp | CACTTTGGGTCATTAAGTTGCACTGACTTGAACTCATCACTGGTAATTAATGAGTGTGATGCAAAGACATaGGCCAGCATTGCTGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HFGSLSCTDLNSSLVINECDAKT*ASIAVN Trigger: ATTCACAGCAATGCTGGCCAATGTCTTTGCATCACA...CTCATTAATTACCAGTGATGAGTTCAAGTCAGTGCAACTTAATGACCCAAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| CDS-3UTR CAA 90 bp | CACTTTGGGTCATTAAGTTGCACTGACTTGAACTCATCACTGGTAATTAATGAGCAAGAACCTTGCACCTaGAGTGTACTTGGTTATAGT | + |
|
Preference number: 5 (lower is better) Translates to: HFGSLSCTDLNSSLVINEQEPCT*SVLGYS Trigger: ACTATAACCAAGTACACTCAAGGTGCAAGGTTCTTG...CTCATTAATTACCAGTGATGAGTTCAAGTCAGTGCAACTTAATGACCCAAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| CDS-3UTR CAA 90 bp | GAAGGGAAGCCAACAACAGGAAAGTTAGTTATGGTGATAAGTGGAAGAAAGACTCATACTGAAATCCTTTaGAAAGAGGACACACTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EGKPTTGKLVMVISGRKTHTEIL*KEDTLH Trigger: ATGGAGTGTGTCCTCTTTCAAAAGGATTTCAGTATG...AGTCTTTCTTCCACTTATCACCATAACTAACTTTCCTGTTGTTGGCTTCCCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| CDS-3UTR CAA 90 bp | CACTTTGGGTCATTAAGTTGCACTGACTTGAACTCATCACTGGTAATTAATGAGGCAGTTTGTGAAGTTTaGACACAGACTGGAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HFGSLSCTDLNSSLVINEAVCEV*TQTGIP Trigger: TGGAATTCCAGTCTGTGTCAAAACTTCACAAACTGC...CTCATTAATTACCAGTGATGAGTTCAAGTCAGTGCAACTTAATGACCCAAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| CDS-3UTR CAA 90 bp | TCTTGGTTTAGATGTTGGGTTAGTTGCAAATTTGTAATTATGAAGGGGCCACATAATGGGAAAAGTCATTaGCTGATCGAAATCATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SWFRCWVSCKFVIMKGPHNGKSH*LIEIIP Trigger: GGGGATGATTTCGATCAGCAAATGACTTTTCCCATT...ATGTGGCCCCTTCATAATTACAAATTTGCAACTAACCCAACATCTAAACCAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| CDS TCA 90 bp | TATAGCTTGGCAGGGCTGGTAAATGTGTTAACTTCAGCACAATATTaGTTTGAGTTTCAGTCTGTAATGATTGAAAAACTCGAGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YSLAGLVNVLTSAQY*FEFQSVMIEKLEQL Trigger: AAGCTGCTCGAGTTTTTCAATCATTACAGACTGAAACTCAAATCAATATTGTGCTGAAGTTAACACATTTACCAGCCCTGCCAAGCTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052843.12 |
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| CDS-3UTR CAA 90 bp | TCTTGGTTTAGATGTTGGGTTAGTTGCAAATTTGTAATTATGAAGGGGCCACATCATACTGAAATCCTTTaGAAAGAGGACACACTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SWFRCWVSCKFVIMKGPHHTEIL*KEDTLH Trigger: ATGGAGTGTGTCCTCTTTCAAAAGGATTTCAGTATG...ATGTGGCCCCTTCATAATTACAAATTTGCAACTAACCCAACATCTAAACCAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| CDS-3UTR CAA 90 bp | TATACTGGAGTTTTTGATGTCAAGCTCCTTGGTAACATAATTTCTGTTCTTGGTAGGAGACGCCTAAAGTaGTCACTAATTCCTAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YTGVFDVKLLGNIISVLGRRRLK*SLIPKG Trigger: TCCTTTAGGAATTAGTGACAACTTTAGGCGTCTCCT...ACCAAGAACAGAAATTATGTTACCAAGGAGCTTGACATCAAAAACTCCAGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| CDS TCA 90 bp | GACTTGCTAGATAATAGCCATGAATCATTCTTTCTGCTTCCAAGCTaGATTCCATATTCAAACTCTTTGCAAAAGCCAGTAGCTTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: DLLDNSHESFFLLPS*IPYSNSLQKPVAFQ Trigger: TTGAAAAGCTACTGGCTTTTGCAAAGAGTTTGAATATGGAATTCAGCTTGGAAGCAGAAAGAATGATTCATGGCTATTATCTAGCAAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS GCA 90 bp | ACACAAGAACCTTGCACCTTGAGTGTACTTGGTTATAGTTGTCATTaGAATCACAATTCCTTGCATCATATAAAATCTCTGAGATGCATA | + |
|
Preference number: 5 (lower is better) Translates to: TQEPCTLSVLGYSCH*NHNSLHHIKSLRCI Trigger: TATGCATCTCAGAGATTTTATATGATGCAAGGAATTGTGATTGCAATGACAACTATAACCAAGTACACTCAAGGTGCAAGGTTCTTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS-3UTR CAA 90 bp | TATACTGGAGTTTTTGATGTCAAGCTCCTTGGTAACATAATTTCTGTTCTTGGTAATGGAAATAATGCATaGGGAGCAACACAAAATGGA | + |
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Preference number: 5 (lower is better) Translates to: YTGVFDVKLLGNIISVLGNGNNA*GATQNG Trigger: TCCATTTTGTGTTGCTCCCAATGCATTATTTCCATT...ACCAAGAACAGAAATTATGTTACCAAGGAGCTTGACATCAAAAACTCCAGTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140948.9 |
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| CDS TCA 72 bp | CAATCTGTGATGCAAAGACATTGGCCAGCATTGCTGTaGATTTCCAGCACGAGCTCGAAGTCAAGGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: QSVMQRHWPALL*ISSTSSKSRRG Trigger: TCCTCTCCTTGACTTCGAGCTCGTGCTGGAAATTCACAGCAATGCTGGCCAATGTCTTTGCATCACAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS TCA 72 bp | CAGATACCACCCTTAGCAAGCAAAGCACTGCCGGCCTaGATGCTCACTGCTCCTGTTCCATATTTATTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QIPPLASKALPA*MLTAPVPYLFL Trigger: CAGAAATAAATATGGAACAGGAGCAGTGAGCATTCAGGCCGGCAGTGCTTTGCTTGCTAAGGGTGGTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS GCA 72 bp | AAAGCCAGTAGCTTTTCAAAGTCTTCAGTTGTGAACTaGTTAGACGCTAAGTACAGCAGCCCCTCAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KASSFSKSSVVN*LDAKYSSPSGS Trigger: GGAGCCTGAGGGGCTGCTGTACTTAGCGTCTAAGCAGTTCACAACTGAAGACTTTGAAAAGCTACTGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS CCA 72 bp | TCTCTGAGCACTGTGGTCCTTAGGCTCAGCCGGGCGTaGGCTTCAGATAAAGACACTAAATATTTTAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLSTVVLRLSRA*ASDKDTKYFNA Trigger: TGCATTAAAATATTTAGTGTCTTTATCTGAAGCCCACGCCCGGCTGAGCCTAAGGACCACAGTGCTCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS CAA 72 bp | CACGAGCTCGAAGTCAAGGAGAGGAGACGCCTAAAGTaGTCACTAATTCCTAAAGGAACTTTTGCTGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HELEVKERRRLK*SLIPKGTFAVW Trigger: CCACACAGCAAAAGTTCCTTTAGGAATTAGTGACAACTTTAGGCGTCTCCTCTCCTTGACTTCGAGCTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS CAA 90 bp | AATTTCCAGCACGAGCTCGAAGTCAAGGAGAGGAGACGCCTAAAGTaGTCACTAATTCCTAAAGGAACTTTTGCTGTGTGGGGAGTGATA | + |
|
Preference number: 6 (lower is better) Translates to: NFQHELEVKERRRLK*SLIPKGTFAVWGVI Trigger: TATCACTCCCCACACAGCAAAAGTTCCTTTAGGAATTAGTGACAACTTTAGGCGTCTCCTCTCCTTGACTTCGAGCTCGTGCTGGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS GCA 72 bp | ATAAAGACACTCTTTTCAAAGTCTTCAGTTGTGAACTaGTTAGACGCTAAGTACAGCAGCCCCTCAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IKTLFSKSSVVN*LDAKYSSPSGS Trigger: GGAGCCTGAGGGGCTGCTGTACTTAGCGTCTAAGCAGTTCACAACTGAAGACTTTGAAAAGAGTGTCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183059.2 |
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| CDS CCA 72 bp | CATTTGCTGATCGAAATCATCCCCAAACTTCTTTCCTaGGATGAATACTGTAACGCTTCTGCTCTCCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HLLIEIIPKLLS*DEYCNASALQS Trigger: GCTTTGGAGAGCAGAAGCGTTACAGTATTCATCCCAGGAAAGAAGTTTGGGGATGATTTCGATCAGCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS CCA 72 bp | TTCTTTAAAGTGTGCTGCACAGTAGGAAGAAGTGGGTaGCAAGGAGATGCCTCACTGCAGTTAATCAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: FFKVCCTVGRSG*QGDASLQLISN Trigger: ATTACTGATTAACTGCAGTGAGGCATCTCCTTGCCACCCACTTCTTCCTACTGTGCAGCACACTTTAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS TCA 72 bp | GGACACACTCCATCTGAACACAAGAACCTTGCACCTTaGGTGTACTTGGTTATAGTTGTCATTGCAATCACA | + |
|
Preference number: 6 (lower is better) Translates to: GHTPSEHKNLAP*VYLVIVVIAIT Trigger: TGTGATTGCAATGACAACTATAACCAAGTACACTCAAGGTGCAAGGTTCTTGTGTTCAGATGGAGTGTGTCC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS CCA 72 bp | GAATCAAACTGCAATCCATCTGACCAATCAGAGTACTaGTTTTCTGCACATTTCTCCTTGAAGATGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: ESNCNPSDQSEY*FSAHFSLKMNP Trigger: TGGATTCATCTTCAAGGAGAAATGTGCAGAAAACCAGTACTCTGATTGGTCAGATGGATTGCAGTTTGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS CAA 90 bp | TCACTGGTTATAACTAAAATATCCAAGCAGTCTTCTCGTTCCCTGTaGCAGTCTCTTGTCTGTACTAGACTCATCAACAAACAAAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLVITKISKQSSRSL*QSLVCTRLINKQSL Trigger: CAAACTTTGTTTGTTGATGAGTCTAGTACAGACAAGAGACTGCAACAGGGAACGAGAAGACTGCTTGGATATTTTAGTTATAACCAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS TCA 72 bp | CTAATTCAACAACGTCACAGGGGTCTATTAGAATACTaGACCGATAGACAGCATAACTCTGCTTTGAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: LIQQRHRGLLEY*TDRQHNSALNH Trigger: ATGATTCAAAGCAGAGTTATGCTGTCTATCGGTTCAGTATTCTAATAGACCCCTGTGACGTTGTTGAATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS CAA 72 bp | ATAACTAAAATATCCAAGCAGTCTTCTCGTTCCCTGTaGCAGTCTCTTGTCTGTACTAGACTCATCAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: ITKISKQSSRSL*QSLVCTRLINK Trigger: TTTGTTGATGAGTCTAGTACAGACAAGAGACTGCAACAGGGAACGAGAAGACTGCTTGGATATTTTAGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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| CDS GCA 72 bp | CCTTGCACCTTGAGTGTACTTGGTTATAGTTGTCATTaGAATCACAATTCCTTGCATCATATAAAATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PCTLSVLGYSCH*NHNSLHHIKSL Trigger: CAGAGATTTTATATGATGCAAGGAATTGTGATTGCAATGACAACTATAACCAAGTACACTCAAGGTGCAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052843.12 ENSMUST00000118098.3 ENSMUST00000125294.9 ENSMUST00000140948.9 ENSMUST00000171802.8 |
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