Pregenerated sensors for MCMBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048170Ensembl transcript IDs: ENSMUST00000057557.14, ENSMUST00000119081.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGAGGGGGAGACGGTGGCTGAGAAAGCTGCAGAGCTACAGAAGTaGACATGTGTGTGGCTGAGAAAGCTGCAGAGCCCGTCTCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: GEGETVAEKAAELQK*TCVWLRKLQSPSLP Trigger: TGGAAGAGACGGGCTCTGCAGCTTTCTCAGCCACACACATGTTCACTTCTGTAGCTCTGCAGCTTTCTCAGCCACCGTCTCCCCCTCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR GCA 90 bp | GGAAAGGCCAGTTCTGCCGGCTGGTACAGCTGGGACGTGGGAAACTaGGTCTGTGGCAGCTGTGTAGAAAATGACACTACAGAAGTCATA | + |
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Preference number: 1 (lower is better) Translates to: GKASSAGWYSWDVGN*VCGSCVENDTTEVI Trigger: TATGACTTCTGTAGTGTCATTTTCTACACAGCTGCCACAGACGCAGTTTCCCACGTCCCAGCTGTACCAGCCGGCAGAACTGGCCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR TCA 90 bp | CAGCTGGGACGTGGGAAACTGCGTCTGTGGCAGCTGTGTAGAAAATaGCACTACAGAAGTCATATCTCGAACTTGTCGCTCAGACCTGTT | + |
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Preference number: 1 (lower is better) Translates to: QLGRGKLRLWQLCRK*HYRSHISNLSLRPV Trigger: AACAGGTCTGAGCGACAAGTTCGAGATATGACTTCTGTAGTGTCATTTTCTACACAGCTGCCACAGACGCAGTTTCCCACGTCCCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR CCA 90 bp | TTTTGGATACAAATTCCCTATAAAACAATGTGGTGTAAAGGACTGTaGACTGCACGCACAGAGGCCGTAGCTTGCCGTTCCCTGCACGCT | + |
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Preference number: 1 (lower is better) Translates to: FWIQIPYKTMWCKGL*TARTEAVACRSLHA Trigger: AGCGTGCAGGGAACGGCAAGCTACGGCCTCTGTGCGTGCAGTCCACAGTCCTTTACACCACATTGTTTTATAGGGAATTTGTATCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR TCA 90 bp | CCTCAATCCCATAATATGTCAGTTGCAGATGACAGATGCAGGAGATaGGAAAAGTTAAGGACAATGTGGTGGTCTTCACAAAGCTGCATT | + |
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Preference number: 1 (lower is better) Translates to: PQSHNMSVADDRCRR*EKLRTMWWSSQSCI Trigger: AATGCAGCTTTGTGAAGACCACCACATTGTCCTTAACTTTTCTCATCTCCTGCATCTGTCATCTGCAACTGACATATTATGGGATTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR TCA 90 bp | AGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATaGAGAGATGTGACAACAGAAGTTAAAGCAATGGTTATTTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: RWEDNACLGFQRNDP*RDVTTEVKAMVISK Trigger: TTTGGAAATAACCATTGCTTTAACTTCTGTTGTCACATCTCTTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTGCCTGGTCAGGGTTACAATCTGATCCAGACCCAGCTACAGATGTGAACAACCGCCACCTGTTCTaGGAAAGGCCAGTTCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: LAAWSGLQSDPDPATDVNNRHLF*ERPVLP Trigger: CGGCAGAACTGGCCTTTCCCAGAACAGGTGGCGGTT...GTTCACATCTGTAGCTGGGTCTGGATCAGATTGTAACCCTGACCAGGCAGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCAGTCAGGGTTACAATCTaGTCCAGACCCAGCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: SQARWEDNACLGFQRNDPVRVTI*SRPSYR Trigger: TCTGTAGCTGGGTCTGGATCAGATTGTAACCCTGAC...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CCA 90 bp | TTGGCAAAATCAATTGGCACCCCTACCTCAGAAAGGTATTACCAGTCTATGAAAGGTACAGCTGGGACGTaGGAAACTGCGTCTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LAKSIGTPTSERYYQSMKGTAGT*ETASVA Trigger: TGCCACAGACGCAGTTTCCCACGTCCCAGCTGTACC...TTTCATAGACTGGTAATACCTTTCTGAGGTAGGGGTGCCAATTGATTTTGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTGCCTGGTCAGGGTTACAATCTGATCCAGACCCAGCTACAGATGTGAACCAGCTGTGTAGAAAATaGCACTACAGAAGTCATATC | + |
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Preference number: 2 (lower is better) Translates to: LAAWSGLQSDPDPATDVNQLCRK*HYRSHI Trigger: GATATGACTTCTGTAGTGTCATTTTCTACACAGCTG...GTTCACATCTGTAGCTGGGTCTGGATCAGATTGTAACCCTGACCAGGCAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR TCA 90 bp | CTAGTAGTTTGTACTTCCTTTCATCAGGCAACTCCCTTGATTTATCAAGGCCGACCAGTCTATGAAATCTaGAAGCCAGGAACCGCCACC | + |
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Preference number: 2 (lower is better) Translates to: LVVCTSFHQATPLIYQGRPVYEI*KPGTAT Trigger: GGTGGCGGTTCCTGGCTTTCAGATTTCATAGACTGG...TCGGCCTTGATAAATCAAGGGAGTTGCCTGATGAAAGGAAGTACAAACTACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CCA 90 bp | CCATGGTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGACTCTGCAGAGGAAGCTaGCACTTCATAGTCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PWSWQFGSFIYWTGLFTGLCRGS*HFIVWP Trigger: AGGCCAGACTATGAAGTGCCAGCTTCCTCTGCAGAG...TCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGACCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATATGTCAGTTGCAGATaGCAGATGCAGGAGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: SQARWEDNACLGFQRNDPYVSCR*QMQEMR Trigger: TCTCATCTCCTGCATCTGTCATCTGCAACTGACATA...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR TCA 90 bp | TTGGCAAAATCAATTGGCACCCCTACCTCAGAAAGGTATTACCAGTCTATGAAAAGGTGTCACCAGACTTaGTTTCAGGAAAAGTCACTG | + |
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Preference number: 2 (lower is better) Translates to: LAKSIGTPTSERYYQSMKRCHQT*FQEKSL Trigger: CAGTGACTTTTCCTGAAATCAAGTCTGGTGACACCT...TTTCATAGACTGGTAATACCTTTCTGAGGTAGGGGTGCCAATTGATTTTGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGAACCCTATAAAACAATGTaGTGTAAAGGACTGTGGACT | + |
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Preference number: 2 (lower is better) Translates to: RPDGKIMHVWVSKEMTHEPYKTM*CKGLWT Trigger: AGTCCACAGTCCTTTACACCACATTGTTTTATAGGG...TTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CCA 90 bp | GACCCTGTTTCCTTGGTTAGCAGGGAAGAATCTAAGGGACCACTGATTGATCTTCATATCAAAATGAATTaGTCAGAGGAAAACCTACCT | + |
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Preference number: 2 (lower is better) Translates to: DPVSLVSREESKGPLIDLHIKMN*SEENLP Trigger: AGGTAGGTTTTCCTCTGACCAATTCATTTTGATATG...AAGATCAATCAGTGGTCCCTTAGATTCTTCCCTGCTAACCAAGGAAACAGGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CCA 90 bp | CTAGTAGTTTGTACTTCCTTTCATCAGGCAACTCCCTTGATTTATCAAGGCCGATTCTTTCAAATGACTTaGCAAAATCAATTGGCACCC | + |
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Preference number: 2 (lower is better) Translates to: LVVCTSFHQATPLIYQGRFFQMT*QNQLAP Trigger: GGGTGCCAATTGATTTTGCCAAGTCATTTGAAAGAA...TCGGCCTTGATAAATCAAGGGAGTTGCCTGATGAAAGGAAGTACAAACTACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGAAGGAAGTTTTATTTACTaGACAGGGTTATTTACGGGA | + |
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Preference number: 2 (lower is better) Translates to: RPDGKIMHVWVSKEMTHEGSFIY*TGLFTG Trigger: TCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCC...TTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAACTTTTTATTCCATTAAAAGATaGTCGTGTTCTGAGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: SWQFGSFIYWTGLFTGTFYSIKR*SCSENV Trigger: GACATTCTCAGAACACGAGCATCTTTTAATGGAATA...AAAAGTTCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR CCA 72 bp | CCGCCACCTGTTCTGGGAAAGGCCAGTTCTGCCGGCTaGTACAGCTGGGACGTGGGAAACTGCGTCTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: PPPVLGKASSAG*YSWDVGNCVCG Trigger: GCCACAGACGCAGTTTCCCACGTCCCAGCTGTACCAGCCGGCAGAACTGGCCTTTCCCAGAACAGGTGGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR TCA 72 bp | GAGACGGTGGCTGAGAAAGCTGCAGAGCTACAGAAGTaGACATGTGTGTGGCTGAGAAAGCTGCAGAGCCCG | + |
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Preference number: 3 (lower is better) Translates to: ETVAEKAAELQK*TCVWLRKLQSP Trigger: CGGGCTCTGCAGCTTTCTCAGCCACACACATGTTCACTTCTGTAGCTCTGCAGCTTTCTCAGCCACCGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR TCA 72 bp | AAGCTGCAGAGCTACAGAAGTGAACATGTGTGTGGCTaGGAAAGCTGCAGAGCCCGTCTCTTCCAGTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: KLQSYRSEHVCG*ESCRARLFQFS Trigger: GCTGAACTGGAAGAGACGGGCTCTGCAGCTTTCTCAGCCACACACATGTTCACTTCTGTAGCTCTGCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CAA 90 bp | CTAGCTGCCTGGTCAGGGTTACAATCTGATCCAGACCCAGCTACAGATGTGAACCATCAGGCAACTCCCTaGATTTATCAAGGCCGACCC | + |
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Preference number: 3 (lower is better) Translates to: LAAWSGLQSDPDPATDVNHQATP*IYQGRP Trigger: GGGTCGGCCTTGATAAATCAAGGGAGTTGCCTGATG...GTTCACATCTGTAGCTGGGTCTGGATCAGATTGTAACCCTGACCAGGCAGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR TCA 72 bp | CCCTACCTCAGAAAGGTATTACCAGTCTATGAAATCTaGAAGCCAGGAACCGCCACCTGTTCTGGGAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: PYLRKVLPVYEI*KPGTATCSGKG Trigger: GCCTTTCCCAGAACAGGTGGCGGTTCCTGGCTTTCAGATTTCATAGACTGGTAATACCTTTCTGAGGTAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR TCA 72 bp | TTGGCACCCCTACCTCAGAAAGGTATTACCAGTCTATaGAATCTGAAAGCCAGGAACCGCCACCTGTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LAPLPQKGITSL*NLKARNRHLFW Trigger: CCAGAACAGGTGGCGGTTCCTGGCTTTCAGATTTCATAGACTGGTAATACCTTTCTGAGGTAGGGGTGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR GCA 72 bp | TGCAGAGCCCGTCTCTTCCAGTTCAGCTTGAGGAGGTaGTCTCCTGTATTTCTAATTCATGAAAAATGGCCC | + |
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Preference number: 3 (lower is better) Translates to: CRARLFQFSLRR*SPVFLIHEKWP Trigger: GGGCCATTTTTCATGAATTAGAAATACAGGAGAGCACCTCCTCAAGCTGAACTGGAAGAGACGGGCTCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR TCA 72 bp | CAGCTTGAGGAGGTGCTCTCCTGTATTTCTAATTCATaGAAAATGGCCCATGGTCCTGGCAATTTGGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: QLEEVLSCISNS*KMAHGPGNLEV Trigger: AACTTCCAAATTGCCAGGACCATGGGCCATTTTTCATGAATTAGAAATACAGGAGAGCACCTCCTCAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CAA 90 bp | CCATGGTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGACCCATAATATGTCAGTaGCAGATGACAGATGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: PWSWQFGSFIYWTGLFTGPIICQ*QMTDAG Trigger: TCCTGCATCTGTCATCTGCAACTGACATATTATGGG...TCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGACCATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCACATGGTCCTGGCAATTaGGAAGTTTTATTTACTGGA | + |
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Preference number: 3 (lower is better) Translates to: SQARWEDNACLGFQRNDPHGPGN*EVLFTG Trigger: TCCAGTAAATAAAACTTCCAAATTGCCAGGACCATG...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR TCA 72 bp | GAAGTCATATCTCGAACTTGTCGCTCAGACCTGTTCTaGATTAACACAGCTCTTCAAATAACTCTGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: EVISRTCRSDLF*INTALQITLQR Trigger: CCTCTGCAGAGTTATTTGAAGAGCTGTGTTAATTCAGAACAGGTCTGAGCGACAAGTTCGAGATATGACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR CCA 72 bp | CTAATTCATGAAAAATGGCCCATGGTCCTGGCAATTTaGAAGTTTTATTTACTGGACAGGGTTATTTACGGG | + |
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Preference number: 3 (lower is better) Translates to: LIHEKWPMVLAI*KFYLLDRVIYG Trigger: CCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGACCATGGGCCATTTTTCATGAATTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR CCA 72 bp | AGGAGGTGCTCTCCTGTATTTCTAATTCATGAAAAATaGCCCATGGTCCTGGCAATTTGGAAGTTTTATTTA | + |
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Preference number: 3 (lower is better) Translates to: RRCSPVFLIHEK*PMVLAIWKFYL Trigger: TAAATAAAACTTCCAAATTGCCAGGACCATGGGCCATTTTTCATGAATTAGAAATACAGGAGAGCACCTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR-3UTR CAA 90 bp | GTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAACTTTACATATCAAAATGAATaGGTCAGAGGAAAACCTACC | + |
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Preference number: 3 (lower is better) Translates to: VLAIWKFYLLDRVIYGNFTYQNE*VRGKPT Trigger: GGTAGGTTTTCCTCTGACCAATTCATTTTGATATGT...AAAGTTCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| 3UTR GCA 72 bp | TGGTCTTCACAAAGCTGCATTTATTCCATTAAAAGATaGTCGTGTTCTGAGAATGTCCTTTATGAAAACAAA | + |
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Preference number: 3 (lower is better) Translates to: WSSQSCIYSIKR*SCSENVLYENK Trigger: TTTGTTTTCATAAAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTGAAGACCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR TCA 90 bp | CTAGCTGCCTGGTCAGGGTTACAATCTGATCCAGACCCAGCTACAGATGTGAACGGACGGCAGCACAGCTaGGAGCAGGCCGTTCATGTA | + |
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Preference number: 4 (lower is better) Translates to: LAAWSGLQSDPDPATDVNGRQHS*EQAVHV Trigger: TACATGAACGGCCTGCTCTCAGCTGTGCTGCCGTCC...GTTCACATCTGTAGCTGGGTCTGGATCAGATTGTAACCCTGACCAGGCAGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR GCA 90 bp | TTGGCAAAATCAATTGGCACCCCTACCTCAGAAAGGTATTACCAGTCTATGAAAGCCCCCGAGGCCTCCTaGTTGCCGGGAGCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: LAKSIGTPTSERYYQSMKAPEAS*LPGAWM Trigger: CATCCAGGCTCCCGGCAAGCAGGAGGCCTCGGGGGC...TTTCATAGACTGGTAATACCTTTCTGAGGTAGGGGTGCCAATTGATTTTGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CCA 90 bp | CTAGCTGCCTGGTCAGGGTTACAATCTGATCCAGACCCAGCTACAGATGTGAACTGCTTGCCGGGAGCCTaGATGCTGCTCCTTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LAAWSGLQSDPDPATDVNCLPGA*MLLLLF Trigger: AAACAGAAGGAGCAGCATCCAGGCTCCCGGCAAGCA...GTTCACATCTGTAGCTGGGTCTGGATCAGATTGTAACCCTGACCAGGCAGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CCA 90 bp | CTAGCTGCCTGGTCAGGGTTACAATCTGATCCAGACCCAGCTACAGATGTGAACACCACAAGCAGCTGGTaGAGGTCATCAGCCGTGATG | + |
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Preference number: 4 (lower is better) Translates to: LAAWSGLQSDPDPATDVNTTSSW*RSSAVM Trigger: CATCACGGCTGATGACCTCCACCAGCTGCTTGTGGT...GTTCACATCTGTAGCTGGGTCTGGATCAGATTGTAACCCTGACCAGGCAGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR TCA 90 bp | GACCCTGTTTCCTTGGTTAGCAGGGAAGAATCTAAGGGACCACTGATTGATCTTAGGAGGTCGAGGGACTaGCTCGAGCTTGGTTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: DPVSLVSREESKGPLIDLRRSRD*LELGSH Trigger: ATGCGAACCAAGCTCGAGTCAGTCCCTCGACCTCCT...AAGATCAATCAGTGGTCCCTTAGATTCTTCCCTGCTAACCAAGGAAACAGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR GCA 90 bp | GACCCTGTTTCCTTGGTTAGCAGGGAAGAATCTAAGGGACCACTGATTGATCTTGAGCTCCAGCTGCTTTaGTCTGAGCCAGCGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: DPVSLVSREESKGPLIDLELQLL*SEPALS Trigger: AGAGAGCGCTGGCTCAGAGCAAAGCAGCTGGAGCTC...AAGATCAATCAGTGGTCCCTTAGATTCTTCCCTGCTAACCAAGGAAACAGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR TCA 90 bp | CTAGCTGCCTGGTCAGGGTTACAATCTGATCCAGACCCAGCTACAGATGTGAACGAAGAGTCTCGTCAATaGCCAGGGAAGTATTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LAAWSGLQSDPDPATDVNEESRQ*PGKYCW Trigger: CCAACAATACTTCCCTGGTCATTGACGAGACTCTTC...GTTCACATCTGTAGCTGGGTCTGGATCAGATTGTAACCCTGACCAGGCAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR GCA 90 bp | AGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGAAGAAGCGGGTGGGCTGTaGACTCTCTGCTCTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RPDGKIMHVWVSKEMTHEEAGGL*TLCSSA Trigger: GGCTGAAGAGCAGAGAGTGCACAGCCCACCCGCTTC...TTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CCA 90 bp | CCATGGTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAGCCACCACAAGCAGCTaGTGGAGGTCATCAGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: PWSWQFGSFIYWTGLFTGATTSS*WRSSAV Trigger: CACGGCTGATGACCTCCACCAGCTGCTTGTGGTGGC...TCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGACCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR TCA 90 bp | CTAGTAGTTTGTACTTCCTTTCATCAGGCAACTCCCTTGATTTATCAAGGCCGAAGATCCGGAACTTGTTaGGCACGGACGGCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: LVVCTSFHQATPLIYQGRRSGTC*ARTAAQ Trigger: CTGTGCTGCCGTCCGTGCTCAACAAGTTCCGGATCT...TCGGCCTTGATAAATCAAGGGAGTTGCCTGATGAAAGGAAGTACAAACTACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR GCA 90 bp | AGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGAACATGGGGTCCAGCAGTaGAGAGGCATCCCTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RPDGKIMHVWVSKEMTHEHGVQQ*RGIPFL Trigger: GAGGAAAGGGATGCCTCTGCACTGCTGGACCCCATG...TTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CCA 90 bp | AGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGAACTCCTCCATGTTGGGTaGTATCAGCTGGGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RPDGKIMHVWVSKEMTHELLHVG*YQLGLQ Trigger: CTGCAGCCCCAGCTGATACCACCCAACATGGAGGAG...TTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CCA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGTACTCCTCCATGTTaGGTGGTATCAGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQARWEDNACLGFQRNDPCTPPC*VVSAGA Trigger: AGCCCCAGCTGATACCACCCAACATGGAGGAGTACA...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CCA 90 bp | TTGGCAAAATCAATTGGCACCCCTACCTCAGAAAGGTATTACCAGTCTATGAAAGAAGCCGGGCCTTCCTaGAGAGCTCCAGCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAKSIGTPTSERYYQSMKEAGPS*RAPAAL Trigger: CAAAGCAGCTGGAGCTCTCCAGGAAGGCCCGGCTTC...TTTCATAGACTGGTAATACCTTTCTGAGGTAGGGGTGCCAATTGATTTTGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR TCA 90 bp | TCACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCGGACGGCAGCACAGCTaGGAGCAGGCCGTTCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQSCIYSIKRCSCSENVLGRQHS*EQAVHV Trigger: TACATGAACGGCCTGCTCTCAGCTGTGCTGCCGTCC...GAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR TCA 90 bp | CCATGGTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAGGAGGTCATCAGCCGTaGTGCTCTGAGGGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PWSWQFGSFIYWTGLFTGGGHQP*CSEGHL Trigger: AAGATGACCCTCAGAGCATCACGGCTGATGACCTCC...TCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGACCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR TCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAACACTCTTCTGCTGCTaGAGCCGGGCCTTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSTLFCC*SRAFLE Trigger: CTCCAGGAAGGCCCGGCTTCAGCAGCAGAAGAGTGT...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR GCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAGCGGGTGGGCTGTaGACTCTCTGCTCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSEAGGL*TLCSSA Trigger: GGCTGAAGAGCAGAGAGTGCACAGCCCACCCGCTTC...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGAATCCTCTTGTGCCTACTaGGAGTGTAGGAGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPDGKIMHVWVSKEMTHESSCAY*ECRRSR Trigger: CCTCGACCTCCTACACTCCCAGTAGGCACAAGAGGA...TTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCAGCTCCTTCTGTTTACTaGGCTGTAGGTCCATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQARWEDNACLGFQRNDPAPSVY*AVGPCP Trigger: AGGACATGGACCTACAGCCCAGTAAACAGAAGGAGC...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
||
| CDS-3UTR CCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAGCCGGGCCTTCCTaGAGAGCTCCAGCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSEAGPS*RAPAAL Trigger: CAAAGCAGCTGGAGCTCTCCAGGAAGGCCCGGCTTC...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR TCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAAGGAGGTCGAGGGACTaGCTCGAGCTTGGTTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSRRSRD*LELGSH Trigger: ATGCGAACCAAGCTCGAGTCAGTCCCTCGACCTCCT...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTAGTTTGTACTTCCTTTCATCAGGCAACTCCCTTGATTTATCAAGGCCGAAGGGCAGTTACGTTATaGACACCTGGCGTGTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVVCTSFHQATPLIYQGRRAVTL*TPGVSN Trigger: GTTGGACACGCCAGGTGTTCATAACGTAACTGCCCT...TCGGCCTTGATAAATCAAGGGAGTTGCCTGATGAAAGGAAGTACAAACTACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
||
| CDS-3UTR TCA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCACCATCTGGTGATAGCTaGAGTCGTAATCCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQARWEDNACLGFQRNDPPSGDS*SRNPPS Trigger: AGAAGGTGGATTACGACTTCAGCTATCACCAGATGG...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
||
| CDS-3UTR TCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAAGATCCGGAACTTGTTaGGCACGGACGGCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSRSGTC*ARTAAQ Trigger: CTGTGCTGCCGTCCGTGCTCAACAAGTTCCGGATCT...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAACTTTTACACTCTTCTGCTGCTaGAGCCGGGCCTTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SWQFGSFIYWTGLFTGTFTLFCC*SRAFLE Trigger: CTCCAGGAAGGCCCGGCTTCAGCAGCAGAAGAGTGT...AAAAGTTCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGCCTGGTCAGGGTTACAATCTGATCCAGACCCAGCTACAGATGTGAACATTAACTCCATTTTGTaGGAAGAAGCCTTGCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAAWSGLQSDPDPATDVNINSIL*EEALHD Trigger: ATCGTGCAAGGCTTCTTCGCACAAAATGGAGTTAAT...GTTCACATCTGTAGCTGGGTCTGGATCAGATTGTAACCCTGACCAGGCAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR GCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCACATGGGGTCCAGCAGTaGAGAGGCATCCCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSHGVQQ*RGIPFL Trigger: GAGGAAAGGGATGCCTCTGCACTGCTGGACCCCATG...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR CCA 90 bp | GACCCTGTTTCCTTGGTTAGCAGGGAAGAATCTAAGGGACCACTGATTGATCTTCGAAGTGGTAGACCTTaGAGAGCTCAAGTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPVSLVSREESKGPLIDLRSGRP*RAQVKF Trigger: GAACTTGACTTGAGCTCTCCAAGGTCTACCACTTCG...AAGATCAATCAGTGGTCCCTTAGATTCTTCCCTGCTAACCAAGGAAACAGGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CCA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCACAGCTCTGCTCTGACTaGAGACAACTCAGACATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQARWEDNACLGFQRNDPQLCSD*RQLRHE Trigger: TTCATGTCTGAGTTGTCTCCAGTCAGAGCAGAGCTG...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCACTCCTCCATGTTGGGTaGTATCAGCTGGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSLLHVG*YQLGLQ Trigger: CTGCAGCCCCAGCTGATACCACCCAACATGGAGGAG...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CCA 90 bp | TCACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAACCGCCACCTGTTCTaGGAAAGGCCAGTTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQSCIYSIKRCSCSENVLNRHLF*ERPVLP Trigger: CGGCAGAACTGGCCTTTCCCAGAACAGGTGGCGGTT...GAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAACTTTGTATTGTTGGGCAGCTaGAGGAGGCCACTGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLAIWKFYLLDRVIYGNFVLLGS*RRPLTS Trigger: ACTGGTCAGTGGCCTCCTTCAGCTGCCCAACAATAC...AAAGTTCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR GCA 90 bp | AGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGAAGTGAAGGTACTGTTCTaGGGGCAACCACTCAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RPDGKIMHVWVSKEMTHEVKVLF*GQPLRL Trigger: TAACCTGAGTGGTTGCCCGCAGAACAGTACCTTCAC...TTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR GCA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAGAGCTCCAGCTGCTTTaGTCTGAGCCAGCGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAAFIPLKDARVLRMSSEELQLL*SEPALS Trigger: AGAGAGCGCTGGCTCAGAGCAAAGCAGCTGGAGCTC...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCATCCTCTTGTGCCTACTaGGAGTGTAGGAGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSSSCAY*ECRRSR Trigger: CCTCGACCTCCTACACTCCCAGTAGGCACAAGAGGA...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CCA 90 bp | TCACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCTGCTTGCCGGGAGCCTaGATGCTGCTCCTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQSCIYSIKRCSCSENVLCLPGA*MLLLLF Trigger: AAACAGAAGGAGCAGCATCCAGGCTCCCGGCAAGCA...GAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CCA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAGGTACAGCTGGGACGTaGGAAACTGCGTCTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KAAFIPLKDARVLRMSSEGTAGT*ETASVA Trigger: TGCCACAGACGCAGTTTCCCACGTCCCAGCTGTACC...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR TCA 90 bp | AGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGAAAAATTGGACACAAACTaGCAGCTTCTGCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPDGKIMHVWVSKEMTHEKLDTN*QLLLSS Trigger: GGAGGAGAGCAGAAGCTGTCAGTTTGTGTCCAATTT...TTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR TCA 90 bp | GTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAACTTTCAAGCAGCTCTGCTCTaGCTGGAGACAACTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VLAIWKFYLLDRVIYGNFQAALL*LETTQT Trigger: TGTCTGAGTTGTCTCCAGTCAGAGCAGAGCTGCTTG...AAAGTTCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR TCA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAGTATTGTTGGGCAGCTaGAGGAGGCCACTGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KAAFIPLKDARVLRMSSEVLLGS*RRPLTS Trigger: ACTGGTCAGTGGCCTCCTTCAGCTGCCCAACAATAC...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR TCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAAGGGCAGTTACGTTATaGACACCTGGCGTGTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSRAVTL*TPGVSN Trigger: GTTGGACACGCCAGGTGTTCATAACGTAACTGCCCT...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR TCA 90 bp | TCACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCCCAGTCTATGAAATCTaGAAGCCAGGAACCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SQSCIYSIKRCSCSENVLPVYEI*KPGTAT Trigger: GGTGGCGGTTCCTGGCTTTCAGATTTCATAGACTGG...GAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR GCA 90 bp | CTAGTAGTTTGTACTTCCTTTCATCAGGCAACTCCCTTGATTTATCAAGGCCGATTCAAGGTGTTCAGCTaGTGTCCAGAGGAAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVVCTSFHQATPLIYQGRFKVFS*CPEEAS Trigger: TGAAGCTTCCTCTGGACAGCAGCTGAACACCTTGAA...TCGGCCTTGATAAATCAAGGGAGTTGCCTGATGAAAGGAAGTACAAACTACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CCA 90 bp | CCATGGTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAAGGACCCTTTTCTCCTaGCAGAGGAAAGTTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PWSWQFGSFIYWTGLFTGRTLFS*QRKVQI Trigger: GATCTGAACTTTCCTCTGCCAGGAGAAAAGGGTCCT...TCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGACCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR TCA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAACAAGCAGCTCTGCTCTaGCTGGAGACAACTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KAAFIPLKDARVLRMSSEQAALL*LETTQT Trigger: TGTCTGAGTTGTCTCCAGTCAGAGCAGAGCTGCTTG...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR GCA 90 bp | TCACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCGTGAAGGTACTGTTCTaGGGGCAACCACTCAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SQSCIYSIKRCSCSENVLVKVLF*GQPLRL Trigger: TAACCTGAGTGGTTGCCCGCAGAACAGTACCTTCAC...GAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAATGTACTCCTCCATGTTaGGTGGTATCAGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KAAFIPLKDARVLRMSSECTPPC*VVSAGA Trigger: AGCCCCAGCTGATACCACCCAACATGGAGGAGTACA...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGACCATCTGGTGATAGCTaGAGTCGTAATCCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSCIYSIKRCSCSENVLRPSGDS*SRNPPS Trigger: AGAAGGTGGATTACGACTTCAGCTATCACCAGATGG...TCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR GCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCATTCAAGGTGTTCAGCTaGTGTCCAGAGGAAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSFKVFS*CPEEAS Trigger: TGAAGCTTCCTCTGGACAGCAGCTGAACACCTTGAA...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCACGAAGTGGTAGACCTTaGAGAGCTCAAGTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSRSGRP*RAQVKF Trigger: GAACTTGACTTGAGCTCTCCAAGGTCTACCACTTCG...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCAGGAATGAGCTTCAACTaGTTCATGTTTTCTATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQARWEDNACLGFQRNDPGMSFN*FMFSIV Trigger: GACAATAGAAAACATGAACCAGTTGAAGCTCATTCC...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
||
| CDS-3UTR TCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCATCATGCAACGAAACTTaGCAAAGCTGTTGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSSCNET*QSCWAS Trigger: TGAAGCCCAACAGCTTTGTCAAGTTTCGTTGCATGA...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCAAAATCAATTGGCACCCCTACCTCAGAAAGGTATTACCAGTCTATGAAAGAGACAACTCAGACATaGAATTGGACACAAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAKSIGTPTSERYYQSMKETTQT*NWTQTD Trigger: GTCAGTTTGTGTCCAATTTCATGTCTGAGTTGTCTC...TTTCATAGACTGGTAATACCTTTCTGAGGTAGGGGTGCCAATTGATTTTGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
||
| CDS-3UTR TCA 90 bp | CAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAGTCTTTGTGGGGAATaGGCTTCAACTGGTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: QSCIYSIKRCSCSENVLRSLCGE*ASTGSC Trigger: ACATGAACCAGTTGAAGCTCATTCCCCACAAAGACT...TCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAGAAGAGTCTCGTCAATaGCCAGGGAAGTATTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KAAFIPLKDARVLRMSSEEESRQ*PGKYCW Trigger: CCAACAATACTTCCCTGGTCATTGACGAGACTCTTC...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAAGGACCCTTTTCTCCTaGCAGAGGAAAGTTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KAAFIPLKDARVLRMSSERTLFS*QRKVQI Trigger: GATCTGAACTTTCCTCTGCCAGGAGAAAAGGGTCCT...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAACAGCTCTGCTCTGACTaGAGACAACTCAGACATGAA | + |
|
Preference number: 4 (lower is better) Translates to: KAAFIPLKDARVLRMSSEQLCSD*RQLRHE Trigger: TTCATGTCTGAGTTGTCTCCAGTCAGAGCAGAGCTG...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR TCA 90 bp | TCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAACTTTTTCATGCAACGAAACTTaGCAAAGCTGTTGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SWQFGSFIYWTGLFTGTFSCNET*QSCWAS Trigger: TGAAGCCCAACAGCTTTGTCAAGTTTCGTTGCATGA...AAAAGTTCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR TCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAGACAACTCAGACATaGAATTGGACACAAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSETTQT*NWTQTD Trigger: GTCAGTTTGTGTCCAATTTCATGTCTGAGTTGTCTC...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR TCA 90 bp | TCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAACTTTTAGTCTTTGTGGGGAATaGGCTTCAACTGGTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SWQFGSFIYWTGLFTGTFSLCGE*ASTGSC Trigger: ACATGAACCAGTTGAAGCTCATTCCCCACAAAGACT...AAAAGTTCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR GCA 90 bp | GTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAACTTTTTGAGGCCCACATTCTaGTACATCTCTGTATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLAIWKFYLLDRVIYGNFLRPTF*YISVFS Trigger: GGAAAATACAGAGATGTAGCAGAATGTGGGCCTCAA...AAAGTTCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR GCA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCATTGAGGCCCACATTCTaGTACATCTCTGTATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKAAFIPLKDARVLRMSSLRPTF*YISVFS Trigger: GGAAAATACAGAGATGTAGCAGAATGTGGGCCTCAA...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR GCA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAATTAACTCCATTTTGTaGGAAGAAGCCTTGCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAAFIPLKDARVLRMSSEINSIL*EEALHD Trigger: ATCGTGCAAGGCTTCTTCGCACAAAATGGAGTTAAT...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CCA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAGGAATGAGCTTCAACTaGTTCATGTTTTCTATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAAFIPLKDARVLRMSSEGMSFN*FMFSIV Trigger: GACAATAGAAAACATGAACCAGTTGAAGCTCATTCC...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS CCA 90 bp | AGCCAGGAACCGCCACCTGTTCTGGGAAAGGCCAGTTCTGCCGGCTaGTACAGCTGGGACGTGGGAAACTGCGTCTGTGGCAGAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQEPPPVLGKASSAG*YSWDVGNCVCGREA Trigger: GGCCTCTCTGCCACAGACGCAGTTTCCCACGTCCCAGCTGTACCAGCCGGCAGAACTGGCCTTTCCCAGAACAGGTGGCGGTTCCTGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS TCA 90 bp | CCAGAGGAAGCTTCAGTTTCTAAGCGTTTTGGCTCTCCGCACCAGTaGAGGCCCCCGAGGCCTCCTGCTTGCCGGGAGCCTGGATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PEEASVSKRFGSPHQ*RPPRPPACREPGCC Trigger: GCAGCATCCAGGCTCCCGGCAAGCAGGAGGCCTCGGGGGCCTTCACTGGTGCGGAGAGCCAAAACGCTTAGAAACTGAAGCTTCCTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS GCA 90 bp | AGCTGGGACGTGGGAAACTGCGTCTGTGGCAGAGAGGCCGTAGCTTaGCGTTCCCTGCACGCTCGGCGCTCTAAAGCTCGTTCCCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWDVGNCVCGREAVA*RSLHARRSKARSHS Trigger: TGAATGGGAACGAGCTTTAGAGCGCCGAGCGTGCAGGGAACGGCAAGCTACGGCCTCTCTGCCACAGACGCAGTTTCCCACGTCCCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS CCA 90 bp | ACGGCAGCACAGCTGAGAGCAGGCCGTTCATGTACTCCTCCATGTTaGGTGGTATCAGCTGGGGCTGCAGGTGAATCTGGCAGTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TAAQLRAGRSCTPPC*VVSAGAAGESGSLP Trigger: CGGCAGACTGCCAGATTCACCTGCAGCCCCAGCTGATACCACCCAACATGGAGGAGTACATGAACGGCCTGCTCTCAGCTGTGCTGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 90 bp | TCCAGCTGCTTTGCTCTGAGCCAGCGCTCTCTGGAGAGTGTTGTCTaGCCGACGCTCAGAGACAGGAATCGAGCCACCACAAGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSCFALSQRSLESVV*PTLRDRNRATTSSW Trigger: CCAGCTGCTTGTGGTGGCTCGATTCCTGTCTCTGAGCGTCGGTCAGACAACACTCTCCAGAGAGCGCTGGCTCAGAGCAAAGCAGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS TCA 90 bp | GGTCAGGTAGATCCGGAACTTGTTGAGCACGGACGGCAGCACAGCTaGGAGCAGGCCGTTCATGTACTCCTCCATGTTGGGTGGTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQVDPELVEHGRQHS*EQAVHVLLHVGWYQ Trigger: CTGATACCACCCAACATGGAGGAGTACATGAACGGCCTGCTCTCAGCTGTGCTGCCGTCCGTGCTCAACAAGTTCCGGATCTACCTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 90 bp | GGCCTCCTGCTTGCCGGGAGCCTGGATGCTGCTCCTTCTGTTTACTaGGCTGTAGGTCCATGTCCTCGTCATCTTCATAACTCCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLLLAGSLDAAPSVY*AVGPCPRHLHNSSC Trigger: ACAAGAGGAGTTATGAAGATGACGAGGACATGGACCTACAGCCCAGTAAACAGAAGGAGCAGCATCCAGGCTCCCGGCAAGCAGGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 90 bp | TTCATGTACTCCTCCATGTTGGGTGGTATCAGCTGGGGCTGCAGGTaGATCTGGCAGTCTGCCGGAAGTAGTGACCTTCCCTCAGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: FMYSSMLGGISWGCR*IWQSAGSSDLPSDV Trigger: CACATCTGAGGGAAGGTCACTACTTCCGGCAGACTGCCAGATTCACCTGCAGCCCCAGCTGATACCACCCAACATGGAGGAGTACATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 90 bp | CTGCCAGGTTATCAGGTTGCTCAGGGCAGTTACGTTATGAACACCTaGCGTGTCCAACTGCCCTTGCTCCAGAAGAGTCTCGTCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPGYQVAQGSYVMNT*RVQLPLLQKSLVND Trigger: GTCATTGACGAGACTCTTCTGGAGCAAGGGCAGTTGGACACGCCAGGTGTTCATAACGTAACTGCCCTGAGCAACCTGATAACCTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 90 bp | TGTAATCCAGGAATCTCAACAAGGTCAGGTAGATCCGGAACTTGTTaGGCACGGACGGCAGCACAGCTGAGAGCAGGCCGTTCATGTACT | + |
|
Preference number: 5 (lower is better) Translates to: CNPGISTRSGRSGTC*ARTAAQLRAGRSCT Trigger: AGTACATGAACGGCCTGCTCTCAGCTGTGCTGCCGTCCGTGCTCAACAAGTTCCGGATCTACCTGACCTTGTTGAGATTCCTGGATTACA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGACCCGAGGCCTCCTGCTaGCCGGGAGCCTGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSCIYSIKRCSCSENVLRPEASC*PGAWML Trigger: CAGCATCCAGGCTCCCGGCAAGCAGGAGGCCTCGGG...TCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS CCA 90 bp | CACGGGGACACAGTAGAAGGTCTGTCTTTCCGAAGTGGTAGACCTTaGAGAGCTCAAGTCAAGTTCTTGTTGAGGCCCACATTCTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: HGDTVEGLSFRSGRP*RAQVKFLLRPTFCY Trigger: GTAGCAGAATGTGGGCCTCAACAAGAACTTGACTTGAGCTCTCCAAGGTCTACCACTTCGGAAAGACAGACCTTCTACTGTGTCCCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAACTTTTCCCGAGGCCTCCTGCTaGCCGGGAGCCTGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SWQFGSFIYWTGLFTGTFPEASC*PGAWML Trigger: CAGCATCCAGGCTCCCGGCAAGCAGGAGGCCTCGGG...AAAAGTTCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS TCA 90 bp | ACAGGAATCGAGCCACCACAAGCAGCTGGTGGAGGTCATCAGCCGTaGTGCTCTGAGGGTCATCTTTACGCATTTCCACAAAATCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGIEPPQAAGGGHQP*CSEGHLYAFPQNHL Trigger: AAGATGATTTTGTGGAAATGCGTAAAGATGACCCTCAGAGCATCACGGCTGATGACCTCCACCAGCTGCTTGTGGTGGCTCGATTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS GCA 90 bp | GGAAAGTTCAGATCAAACGGGGAAGAGAGGTTCAAGGTGTTCAGCTaGTGTCCAGAGGAAGCTTCAGTTTCTAAGCGTTTTGGCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GKFRSNGEERFKVFS*CPEEASVSKRFGSP Trigger: CGGAGAGCCAAAACGCTTAGAAACTGAAGCTTCCTCTGGACAGCAGCTGAACACCTTGAACCTCTCTTCCCCGTTTGATCTGAACTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 90 bp | CCAATCTTCGTAGACCTTAACAAGGCAGGCAGGACCCTTTTCTCCTaGCAGAGGAAAGTTCAGATCAAACGGGGAAGAGAGGTTCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PIFVDLNKAGRTLFS*QRKVQIKRGREVQG Trigger: ACCTTGAACCTCTCTTCCCCGTTTGATCTGAACTTTCCTCTGCCAGGAGAAAAGGGTCCTGCCTGCCTTGTTAAGGTCTACGAAGATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 90 bp | TCCCAAGAGTGCGTGAGTGAGGAATCCAAGCAGCTCTGCTCTGACTaGAGACAACTCAGACATGAAATTGGACACAAACTGACAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQECVSEESKQLCSD*RQLRHEIGHKLTAS Trigger: AGAAGCTGTCAGTTTGTGTCCAATTTCATGTCTGAGTTGTCTCCAGTCAGAGCAGAGCTGCTTGGATTCCTCACTCACGCACTCTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS-3UTR CAA 90 bp | CTAGTAGTTTGTACTTCCTTTCATCAGGCAACTCCCTTGATTTATCAAGGCCGAGGGACTGACTCGAGCTaGGTTCGCATTGACATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVVCTSFHQATPLIYQGRGTDSS*VRIDIG Trigger: GCCTATGTCAATGCGAACCAAGCTCGAGTCAGTCCC...TCGGCCTTGATAAATCAAGGGAGTTGCCTGATGAAAGGAAGTACAAACTACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CAA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGCCAGGTTATCAGGTaGCTCAGGGCAGTTACGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SQARWEDNACLGFQRNDPCQVIR*LRAVTL Trigger: TAACGTAACTGCCCTGAGCAACCTGATAACCTGGCA...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CAA 90 bp | CCATGGTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAATGTACTCCTCCATGTaGGGTGGTATCAGCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PWSWQFGSFIYWTGLFTGMYSSM*GGISWG Trigger: GCCCCAGCTGATACCACCCAACATGGAGGAGTACAT...TCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGACCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS TCA 90 bp | TGCAATATAAGATATTCAGCAGCCAAACTATCTCCCAAGAGTGCGTaGGTGAGGAATCCAAGCAGCTCTGCTCTGACTGGAGACAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: CNIRYSAAKLSPKSA*VRNPSSSALTGDNS Trigger: TGAGTTGTCTCCAGTCAGAGCAGAGCTGCTTGGATTCCTCACTCACGCACTCTTGGGAGATAGTTTGGCTGCTGAATATCTTATATTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS-3UTR CAA 90 bp | GACCCTGTTTCCTTGGTTAGCAGGGAAGAATCTAAGGGACCACTGATTGATCTTTCATCTTCAACCGCCTaGGTTATGTCGTCTGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: DPVSLVSREESKGPLIDLSSSTA*VMSSDR Trigger: CCTATCAGACGACATAACCAAGGCGGTTGAAGATGA...AAGATCAATCAGTGGTCCCTTAGATTCTTCCCTGCTAACCAAGGAAACAGGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CAA 90 bp | GACCCTGTTTCCTTGGTTAGCAGGGAAGAATCTAAGGGACCACTGATTGATCTTATCATGCAACGAAACTaGACAAAGCTGTTGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DPVSLVSREESKGPLIDLIMQRN*TKLLGF Trigger: GAAGCCCAACAGCTTTGTCAAGTTTCGTTGCATGAT...AAGATCAATCAGTGGTCCCTTAGATTCTTCCCTGCTAACCAAGGAAACAGGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CAA 90 bp | AGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGAAGCTCAAGTCAAGTTCTaGTTGAGGCCCACATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RPDGKIMHVWVSKEMTHEAQVKF*LRPTFC Trigger: GCAGAATGTGGGCCTCAACAAGAACTTGACTTGAGC...TTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CAA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGGGACTGACTCGAGCTaGGTTCGCATTGACATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HKAAFIPLKDARVLRMSSGTDSS*VRIDIG Trigger: GCCTATGTCAATGCGAACCAAGCTCGAGTCAGTCCC...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CAA 90 bp | CTAGTAGTTTGTACTTCCTTTCATCAGGCAACTCCCTTGATTTATCAAGGCCGACAAGTCAAGTTCTTGTaGAGGCCCACATTCTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LVVCTSFHQATPLIYQGRQVKFL*RPTFCY Trigger: GTAGCAGAATGTGGGCCTCAACAAGAACTTGACTTG...TCGGCCTTGATAAATCAAGGGAGTTGCCTGATGAAAGGAAGTACAAACTACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CAA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCAAGGACATCATTGACTTaGAAGCAATCCCAATCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SQARWEDNACLGFQRNDPRTSLT*KQSQSS Trigger: CGAAGATTGGGATTGCTTCAAAGTCAATGATGTCCT...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CAA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAATGTACTCCTCCATGTaGGGTGGTATCAGCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KAAFIPLKDARVLRMSSEMYSSM*GGISWG Trigger: GCCCCAGCTGATACCACCCAACATGGAGGAGTACAT...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS TCA 90 bp | TGTAAAACTCAGGGTCAAACATATCCTGAATCATGCAACGAAACTTaGCAAAGCTGTTGGGCTTCAGATAATGGAGGGGCACTTCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CKTQGQTYPESCNET*QSCWASDNGGALRS Trigger: TGAACGAAGTGCCCCTCCATTATCTGAAGCCCAACAGCTTTGTCAAGTTTCGTTGCATGATTCAGGATATGTTTGACCCTGAGTTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 90 bp | GAGGGTCATCTTTACGCATTTCCACAAAATCATCTTCAACCGCCTTaGTTATGTCGTCTGATAGGTTGTAATCCAGGAATCTCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGHLYAFPQNHLQPP*LCRLIGCNPGISTR Trigger: CCTTGTTGAGATTCCTGGATTACAACCTATCAGACGACATAACCAAGGCGGTTGAAGATGATTTTGTGGAAATGCGTAAAGATGACCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CAA 90 bp | TCACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCTGCCAGGTTATCAGGTaGCTCAGGGCAGTTACGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SQSCIYSIKRCSCSENVLCQVIR*LRAVTL Trigger: TAACGTAACTGCCCTGAGCAACCTGATAACCTGGCA...GAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCAGGTTCATGTTTTCTATaGTCATCTGTAGACGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SQARWEDNACLGFQRNDPGSCFL*SSVDEK Trigger: CTTTTCGTCTACAGATGACAATAGAAAACATGAACC...TGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
||
| CDS-3UTR CAA 90 bp | CCATGGTCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAATGAGAACATTGATATaGCATGGGAACTCCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PWSWQFGSFIYWTGLFTGMRTLI*HGNSIW Trigger: CCAGATGGAGTTCCCATGCAATATCAATGTTCTCAT...TCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGACCATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGATGGGAAGATAATGCATGTTTGGGTTTCCAAAGAAATGACCCATGAAGATGTGATGAGAACATaGATATTGCATGGGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPDGKIMHVWVSKEMTHEDVMRT*ILHGNS Trigger: GGAGTTCCCATGCAATATCAATGTTCTCATCACATC...TTCATGGGTCATTTCTTTGGAAACCCAAACATGCATTATCTTCCCATCTGGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CAA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAACAAGTCAAGTTCTTGTaGAGGCCCACATTCTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: KAAFIPLKDARVLRMSSEQVKFL*RPTFCY Trigger: GTAGCAGAATGTGGGCCTCAACAAGAACTTGACTTG...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAATCATGCAACGAAACTaGACAAAGCTGTTGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KAAFIPLKDARVLRMSSEIMQRN*TKLLGF Trigger: GAAGCCCAACAGCTTTGTCAAGTTTCGTTGCATGAT...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR CAA 90 bp | TCACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGGACATCATTGACTTaGAAGCAATCCCAATCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SQSCIYSIKRCSCSENVLRTSLT*KQSQSS Trigger: CGAAGATTGGGATTGCTTCAAAGTCAATGATGTCCT...GAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGGCAATTTGGAAGTTTTATTTACTGGACAGGGTTATTTACGGGAACTTTTAAATCACATGAATTCTaGGCACTAGTGAAGCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SWQFGSFIYWTGLFTGTFKSHEF*ALVKRV Trigger: CACCCGCTTCACTAGTGCCAAGAATTCATGTGATTT...AAAAGTTCCCGTAAATAACCCTGTCCAGTAAATAAAACTTCCAAATTGCCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS-3UTR CAA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAAAATCACATGAATTCTaGGCACTAGTGAAGCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: KAAFIPLKDARVLRMSSEKSHEF*ALVKRV Trigger: CACCCGCTTCACTAGTGCCAAGAATTCATGTGATTT...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CAA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGATGTGATGAGAACATaGATATTGCATGGGAACTCC | + |
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Preference number: 5 (lower is better) Translates to: HKAAFIPLKDARVLRMSSDVMRT*ILHGNS Trigger: GGAGTTCCCATGCAATATCAATGTTCTCATCACATC...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CAA 90 bp | AAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGAAATGAGAACATTGATATaGCATGGGAACTCCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: KAAFIPLKDARVLRMSSEMRTLI*HGNSIW Trigger: CCAGATGGAGTTCCCATGCAATATCAATGTTCTCAT...TTCTGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS-3UTR CAA 90 bp | CACAAAGCTGCATTTATTCCATTAAAAGATGCTCGTGTTCTGAGAATGTCCTCAGGTTCATGTTTTCTATaGTCATCTGTAGACGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: HKAAFIPLKDARVLRMSSGSCFL*SSVDEK Trigger: CTTTTCGTCTACAGATGACAATAGAAAACATGAACC...TGAGGACATTCTCAGAACACGAGCATCTTTTAATGGAATAAATGCAGCTTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS GCA 72 bp | AGGCCCCCGAGGCCTCCTGCTTGCCGGGAGCCTGGATaGTGCTCCTTCTGTTTACTGGGCTGTAGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: RPPRPPACREPG*CSFCLLGCRSM Trigger: CATGGACCTACAGCCCAGTAAACAGAAGGAGCAGCATCCAGGCTCCCGGCAAGCAGGAGGCCTCGGGGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS GCA 72 bp | GTGGGAAACTGCGTCTGTGGCAGAGAGGCCGTAGCTTaGCGTTCCCTGCACGCTCGGCGCTCTAAAGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: VGNCVCGREAVA*RSLHARRSKAR Trigger: ACGAGCTTTAGAGCGCCGAGCGTGCAGGGAACGGCAAGCTACGGCCTCTCTGCCACAGACGCAGTTTCCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS GCA 72 bp | AGTTCTGCCGGCTGGTACAGCTGGGACGTGGGAAACTaGGTCTGTGGCAGAGAGGCCGTAGCTTGCCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSAGWYSWDVGN*VCGREAVACRS Trigger: GGAACGGCAAGCTACGGCCTCTCTGCCACAGACGCAGTTTCCCACGTCCCAGCTGTACCAGCCGGCAGAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS CCA 72 bp | GTTCTGGGAAAGGCCAGTTCTGCCGGCTGGTACAGCTaGGACGTGGGAAACTGCGTCTGTGGCAGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VLGKASSAGWYS*DVGNCVCGREA Trigger: GGCCTCTCTGCCACAGACGCAGTTTCCCACGTCCCAGCTGTACCAGCCGGCAGAACTGGCCTTTCCCAGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119081.2 |
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| CDS GCA 72 bp | CTTGGCACTAGTGAAGCGGGTGGGCTGTGCACTCTCTaGTCTTCAGCCATGTCTGTGCACTCCATGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LGTSEAGGLCTL*SSAMSVHSMGS Trigger: GGACCCCATGGAGTGCACAGACATGGCTGAAGAGCAGAGAGTGCACAGCCCACCCGCTTCACTAGTGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CAA 72 bp | GCTGCTGTCCAGAGGAAGCTTCAGTTTCTAAGCGTTTaGGCTCTCCGCACCAGTGAAGGCCCCCGAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: AAVQRKLQFLSV*ALRTSEGPRGL Trigger: GAGGCCTCGGGGGCCTTCACTGGTGCGGAGAGCCAAAACGCTTAGAAACTGAAGCTTCCTCTGGACAGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CAA 90 bp | AGGTGTTCAGCTGCTGTCCAGAGGAAGCTTCAGTTTCTAAGCGTTTaGGCTCTCCGCACCAGTGAAGGCCCCCGAGGCCTCCTGCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: RCSAAVQRKLQFLSV*ALRTSEGPRGLLLA Trigger: GGCAAGCAGGAGGCCTCGGGGGCCTTCACTGGTGCGGAGAGCCAAAACGCTTAGAAACTGAAGCTTCCTCTGGACAGCAGCTGAACACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 72 bp | TCCTCCATGTTGGGTGGTATCAGCTGGGGCTGCAGGTaGATCTGGCAGTCTGCCGGAAGTAGTGACCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSMLGGISWGCR*IWQSAGSSDLP Trigger: GGGAAGGTCACTACTTCCGGCAGACTGCCAGATTCACCTGCAGCCCCAGCTGATACCACCCAACATGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 72 bp | GATCCGGAACTTGTTGAGCACGGACGGCAGCACAGCTaGGAGCAGGCCGTTCATGTACTCCTCCATGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: DPELVEHGRQHS*EQAVHVLLHVG Trigger: CCCAACATGGAGGAGTACATGAACGGCCTGCTCTCAGCTGTGCTGCCGTCCGTGCTCAACAAGTTCCGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 72 bp | CAGCTGAGAGCAGGCCGTTCATGTACTCCTCCATGTTaGGTGGTATCAGCTGGGGCTGCAGGTGAATCTGGC | + |
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Preference number: 6 (lower is better) Translates to: QLRAGRSCTPPC*VVSAGAAGESG Trigger: GCCAGATTCACCTGCAGCCCCAGCTGATACCACCCAACATGGAGGAGTACATGAACGGCCTGCTCTCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CAA 90 bp | CTTGTGCCTACTGGGAGTGTAGGAGGTCGAGGGACTGACTCGAGCTaGGTTCGCATTGACATAGGCCTCTTTGACCCACGAAGACTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LVPTGSVGGRGTDSS*VRIDIGLFDPRRLP Trigger: GGGGAGTCTTCGTGGGTCAAAGAGGCCTATGTCAATGCGAACCAAGCTCGAGTCAGTCCCTCGACCTCCTACACTCCCAGTAGGCACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 72 bp | CCAGGGAAGTATTGTTGGGCAGCTGAAGGAGGCCACTaGCCAGTCGGTTGGCTGTGTAGTCTTTGTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: PGKYCWAAEGGH*PVGWLCSLCGE Trigger: TTCCCCACAAAGACTACACAGCCAACCGACTGGTCAGTGGCCTCCTTCAGCTGCCCAACAATACTTCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CAA 72 bp | ACTGGGAGTGTAGGAGGTCGAGGGACTGACTCGAGCTaGGTTCGCATTGACATAGGCCTCTTTGACCCACGA | + |
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Preference number: 6 (lower is better) Translates to: TGSVGGRGTDSS*VRIDIGLFDPR Trigger: TCGTGGGTCAAAGAGGCCTATGTCAATGCGAACCAAGCTCGAGTCAGTCCCTCGACCTCCTACACTCCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 72 bp | TGTCCAACTGCCCTTGCTCCAGAAGAGTCTCGTCAATaGCCAGGGAAGTATTGTTGGGCAGCTGAAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: CPTALAPEESRQ*PGKYCWAAEGG Trigger: GCCTCCTTCAGCTGCCCAACAATACTTCCCTGGTCATTGACGAGACTCTTCTGGAGCAAGGGCAGTTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 72 bp | TGCCAGGTTATCAGGTTGCTCAGGGCAGTTACGTTATaGACACCTGGCGTGTCCAACTGCCCTTGCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: CQVIRLLRAVTL*TPGVSNCPCSR Trigger: TCTGGAGCAAGGGCAGTTGGACACGCCAGGTGTTCATAACGTAACTGCCCTGAGCAACCTGATAACCTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 72 bp | GAGCCACCACAAGCAGCTGGTGGAGGTCATCAGCCGTaGTGCTCTGAGGGTCATCTTTACGCATTTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: EPPQAAGGGHQP*CSEGHLYAFPQ Trigger: TTGTGGAAATGCGTAAAGATGACCCTCAGAGCATCACGGCTGATGACCTCCACCAGCTGCTTGTGGTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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| CDS CCA 72 bp | CTTGCCGGGAGCCTGGATGCTGCTCCTTCTGTTTACTaGGCTGTAGGTCCATGTCCTCGTCATCTTCATAAC | + |
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Preference number: 6 (lower is better) Translates to: LAGSLDAAPSVY*AVGPCPRHLHN Trigger: GTTATGAAGATGACGAGGACATGGACCTACAGCCCAGTAAACAGAAGGAGCAGCATCCAGGCTCCCGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CAA 90 bp | GCTCAGGGCAGTTACGTTATGAACACCTGGCGTGTCCAACTGCCCTaGCTCCAGAAGAGTCTCGTCAATGACCAGGGAAGTATTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: AQGSYVMNTWRVQLP*LQKSLVNDQGSIVG Trigger: CCCAACAATACTTCCCTGGTCATTGACGAGACTCTTCTGGAGCAAGGGCAGTTGGACACGCCAGGTGTTCATAACGTAACTGCCCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 72 bp | TATCAGGTTGCTCAGGGCAGTTACGTTATGAACACCTaGCGTGTCCAACTGCCCTTGCTCCAGAAGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: YQVAQGSYVMNT*RVQLPLLQKSL Trigger: GAGACTCTTCTGGAGCAAGGGCAGTTGGACACGCCAGGTGTTCATAACGTAACTGCCCTGAGCAACCTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 72 bp | GTAGACCTTAACAAGGCAGGCAGGACCCTTTTCTCCTaGCAGAGGAAAGTTCAGATCAAACGGGGAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VDLNKAGRTLFS*QRKVQIKRGRE Trigger: CTCTCTTCCCCGTTTGATCTGAACTTTCCTCTGCCAGGAGAAAAGGGTCCTGCCTGCCTTGTTAAGGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 72 bp | AGATATTCAGCAGCCAAACTATCTCCCAAGAGTGCGTaGGTGAGGAATCCAAGCAGCTCTGCTCTGACTGGA | + |
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Preference number: 6 (lower is better) Translates to: RYSAAKLSPKSA*VRNPSSSALTG Trigger: TCCAGTCAGAGCAGAGCTGCTTGGATTCCTCACTCACGCACTCTTGGGAGATAGTTTGGCTGCTGAATATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CAA 72 bp | AATAACCTTCTTCTCCCAGTCAGGATTAACTCCATTTaGTGCGAAGAAGCCTTGCACGATCCCGAGCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: NNLLLPVRINSI*CEEALHDPERV Trigger: CACCCGCTCGGGATCGTGCAAGGCTTCTTCGCACAAAATGGAGTTAATCCTGACTGGGAGAAGAAGGTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 72 bp | ACAGTAGAAGGTCTGTCTTTCCGAAGTGGTAGACCTTaGAGAGCTCAAGTCAAGTTCTTGTTGAGGCCCACA | + |
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Preference number: 6 (lower is better) Translates to: TVEGLSFRSGRP*RAQVKFLLRPT Trigger: TGTGGGCCTCAACAAGAACTTGACTTGAGCTCTCCAAGGTCTACCACTTCGGAAAGACAGACCTTCTACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CAA 72 bp | TGTGCTGCAACTTCTGAGCTAAAATCACATGAATTCTaGGCACTAGTGAAGCGGGTGGGCTGTGCACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CAATSELKSHEF*ALVKRVGCALS Trigger: AGAGAGTGCACAGCCCACCCGCTTCACTAGTGCCAAGAATTCATGTGATTTTAGCTCAGAAGTTGCAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS GCA 72 bp | AGATCAAACGGGGAAGAGAGGTTCAAGGTGTTCAGCTaGTGTCCAGAGGAAGCTTCAGTTTCTAAGCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RSNGEERFKVFS*CPEEASVSKRF Trigger: AAAACGCTTAGAAACTGAAGCTTCCTCTGGACAGCAGCTGAACACCTTGAACCTCTCTTCCCCGTTTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS TCA 72 bp | GTGGTAGACCTTGGAGAGCTCAAGTCAAGTTCTTGTTaGGGCCCACATTCTGCTACATCTCTGTATTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: VVDLGELKSSSC*GPHSATSLYFP Trigger: TGGAAAATACAGAGATGTAGCAGAATGTGGGCCTCAACAAGAACTTGACTTGAGCTCTCCAAGGTCTACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CAA 72 bp | CGAAGTGGTAGACCTTGGAGAGCTCAAGTCAAGTTCTaGTTGAGGCCCACATTCTGCTACATCTCTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: RSGRPWRAQVKF*LRPTFCYISVF Trigger: AAATACAGAGATGTAGCAGAATGTGGGCCTCAACAAGAACTTGACTTGAGCTCTCCAAGGTCTACCACTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CAA 90 bp | CTGTCTTTCCGAAGTGGTAGACCTTGGAGAGCTCAAGTCAAGTTCTaGTTGAGGCCCACATTCTGCTACATCTCTGTATTTTCCAAAATG | + |
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Preference number: 6 (lower is better) Translates to: LSFRSGRPWRAQVKF*LRPTFCYISVFSKM Trigger: CATTTTGGAAAATACAGAGATGTAGCAGAATGTGGGCCTCAACAAGAACTTGACTTGAGCTCTCCAAGGTCTACCACTTCGGAAAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 72 bp | CCTTCCCTCAGATGTGATGAGAACATTGATATTGCATaGGAACTCCATCTGGTGATAGCTGAAGTCGTAATC | + |
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Preference number: 6 (lower is better) Translates to: PSLRCDENIDIA*ELHLVIAEVVI Trigger: GATTACGACTTCAGCTATCACCAGATGGAGTTCCCATGCAATATCAATGTTCTCATCACATCTGAGGGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057557.14 ENSMUST00000119081.2 |
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| CDS CCA 72 bp | CTTTACGCATTTCCACAAAATCATCTTCAACCGCCTTaGTTATGTCGTCTGATAGGTTGTAATCCAGGAATC | + |
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Preference number: 6 (lower is better) Translates to: LYAFPQNHLQPP*LCRLIGCNPGI Trigger: GATTCCTGGATTACAACCTATCAGACGACATAACCAAGGCGGTTGAAGATGATTTTGTGGAAATGCGTAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057557.14 |
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