Pregenerated sensors for MCM8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027353Ensembl transcript IDs: ENSMUST00000028831.15, ENSMUST00000066559.6
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGAGACACGAGAAGAGGGCATTGGATCCCATTACAGATGGTTGTaGGTCACCATGTGGTTGCTGGGACTTGAACTCAGGACCTATGGA | + |
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Preference number: 1 (lower is better) Translates to: SETREEGIGSHYRWL*VTMWLLGLELRTYG Trigger: TCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTCACAACCATCTGTAATGGGATCCAATGCCCTCTTCTCGTGTCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR CCA 90 bp | TGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTaGATCCCATTACAGATGGTTGTGAGTCACCATGTGGTTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CECTVTLFRDTRRGH*IPLQMVVSHHVVAG Trigger: CCCAGCAACCACATGGTGACTCACAACCATCTGTAATGGGATCCAATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR CCA 90 bp | GCATTGGATCCCATTACAGATGGTTGTGAGTCACCATGTGGTTGCTaGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ALDPITDGCESPCGC*DLNSGPMEEQSVLL Trigger: TAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTCACAACCATCTGTAATGGGATCCAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTGTGAGTCACCATGTGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGTCCACTACTTTCAAATaGGAAGCCAAGTCAGACCCA | + |
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Preference number: 2 (lower is better) Translates to: GCESPCGCWDLNSGPMEESTTFK*EAKSDP Trigger: TGGGTCTGACTTGGCTTCTCATTTGAAAGTAGTGGA...CTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTCACAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR-3UTR TCA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCGTGGTTGCTGGGACTTaGACTCAGGACCTATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RFIYVSALLLSSETREEGVVAGT*TQDLWK Trigger: CTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCAC...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR-3UTR TCA 90 bp | TATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTGGATCCGATTCTGAACTATTTTaGACCACAGGAAGCCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: YVSALLLSSETREEGIGSDSELF*TTGSPD Trigger: ATCAGGGCTTCCTGTGGTTCAAAATAGTTCAGAATC...GGATCCAATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR-3UTR GCA 90 bp | ATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATGAGTCACCATGTGGTTaGTGGGACTTGAACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: IYLCECTVTLFRDTRRGHESPCG*WDLNSG Trigger: TCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTC...ATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR-3UTR TCA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCTGTTTTTGCATTAGCTaGATGCCTGCTAGACATCTG | + |
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Preference number: 2 (lower is better) Translates to: RFIYVSALLLSSETREEGCFCIS*MPARHL Trigger: CAGATGTCTAGCAGGCATTCAGCTAATGCAAAAACA...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR-3UTR TCA 90 bp | ATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTGCCTGCTAGACATCTaGTATACAAAACTAAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: IYLCECTVTLFRDTRRGHCLLDI*YTKLKS Trigger: GCTTTTTAGTTTTGTATATCAGATGTCTAGCAGGCA...ATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGATTCTGAACTATTTTaGACCACAGGAAGCCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSDSELF*TTGSPD Trigger: ATCAGGGCTTCCTGTGGTTCAAAATAGTTCAGAATC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGTCACCATGTGGTTGCTGGGACTTaGACTCAGGACCTATGGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGT*TQDLWKSSQCS Trigger: AGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTCACAACCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR GCA 72 bp | GATCCCATTACAGATGGTTGTGAGTCACCATGTGGTTaGTGGGACTTGAACTCAGGACCTATGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DPITDGCESPCG*WDLNSGPMEEQ Trigger: CTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTCACAACCATCTGTAATGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGTCACCATGTGGTTGCTaGGACTTGAACTCAGGACCTATGGAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: PITDGCESPCGC*DLNSGPMEEQS Trigger: TGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTCACAACCATCTGTAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR CCA 72 bp | ACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTaGATCCCATTACAGATGGTTGTGAGTCACCATGTG | + |
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Preference number: 3 (lower is better) Translates to: TVTLFRDTRRGH*IPLQMVVSHHV Trigger: CACATGGTGACTCACAACCATCTGTAATGGGATCCAATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR-3UTR CAA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCTGTGGTTGCTGGGACTaGAACTCAGGACCTATGGAA | + |
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Preference number: 3 (lower is better) Translates to: RFIYVSALLLSSETREEGCGCWD*NSGPME Trigger: TTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACA...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR TCA 72 bp | AGGACCTATGGAAGAGCAGTCAGTGCTCTTAACCACTaGGTCATCTCTCTAGCCCCAGAAAAGACTTCTAAT | + |
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Preference number: 3 (lower is better) Translates to: RTYGRAVSALNH*VISLAPEKTSN Trigger: ATTAGAAGTCTTTTCTGGGGCTAGAGAGATGACTCAGTGGTTAAGAGCACTGACTGCTCTTCCATAGGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR TCA 72 bp | TCACCTGAACACATACTAATCTGTTTTTGCATTAGCTaGATGCCTGCTAGACATCTGATATACAAAACTAAA | + |
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Preference number: 3 (lower is better) Translates to: SPEHILICFCIS*MPARHLIYKTK Trigger: TTTAGTTTTGTATATCAGATGTCTAGCAGGCATTCAGCTAATGCAAAAACAGATTAGTATGTGTTCAGGTGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR CCA 90 bp | AACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACCACTGAGTCATCTCTCGAGCTGCCCACGCGCTaGCTCTGCTTGCGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSGPMEEQSVLLTTESSLELPTR*LCLRSS Trigger: GGAGCTCCGCAAGCAGAGCCAGCGCGTGGGCAGCTC...GAGAGATGACTCAGTGGTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | AACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACCACTGAGTCATCTCTCGCGCAGTGGAGCAAATaGCCTCCCTCGGCACGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NSGPMEEQSVLLTTESSLAQWSK*PPSARR Trigger: CCTGCGTGCCGAGGGAGGTCATTTGCTCCACTGCGC...GAGAGATGACTCAGTGGTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | TGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACGCTGCCTGTAGCATCTaGCTCTTCCCCAAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: WLLGLELRTYGRAVSALNAACSI*LFPKPG Trigger: TCCAGGCTTGGGGAAGAGTCAGATGCTACAGGCAGC...GTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR GCA 90 bp | TGTGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTACACGTGGCGCCACGTTaGATGCTGCCTGTAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: CGCWDLNSGPMEEQSVLLHVAPR*MLPVAS Trigger: AGATGCTACAGGCAGCATGCAACGTGGCGCCACGTG...TAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR GCA 90 bp | TTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACCACTTCTTGCAGGGAGGCTaGAAACTACCCCAGCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: LLGLELRTYGRAVSALNHFLQGG*KLPQPS Trigger: CGAAGGCTGGGGTAGTTTGCAGCCTCCCTGCAAGAA...GTGGTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR CCA 90 bp | GGTTGTGAGTCACCATGTGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGACTCTTCCCCAAGCCTaGATCTCCAACAATCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GCESPCGCWDLNSGPMEETLPQA*ISNNQD Trigger: GTCCTGATTGTTGGAGATCCAGGCTTGGGGAAGAGT...CTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTCACAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR CCA 90 bp | AACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACCACTGAGTCATCTCTCATCCCAGAGCCATGCTaGGATCGCTCAAAGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NSGPMEEQSVLLTTESSLIPEPC*DRSKSR Trigger: CCTGGACTTTGAGCGATCCCAGCATGGCTCTGGGAT...GAGAGATGACTCAGTGGTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGTCACCATGTGGTTGCTGGGACTaGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TDGCESPCGCWD*NSGPMEEQSVL Trigger: GAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTCACAACCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | AGAAGAGGGCATTGGATCCCATTACAGATGGTTGTGAGTCACCATGTGGTTGCTTTGAAAGAGTCACAGTaGGACCAGAGCTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RRGHWIPLQMVVSHHVVALKESQ*DQSWWW Trigger: CCACCACCAGCTCTGGTCTCACTGTGACTCTTTCAA...AGCAACCACATGGTGACTCACAACCATCTGTAATGGGATCCAATGCCCTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGAGCTGCCCACGCGCTaGCTCTGCTTGCGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSELPTR*LCLRSS Trigger: GGAGCTCCGCAAGCAGAGCCAGCGCGTGGGCAGCTC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | GTCAATAAATTTCCACTACTTTCAAATGAGAAGCCAAGTCAGACCCACTGCCCAGGCAGAGGAAAGCTCTaGATCTCTCCACATGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: VNKFPLLSNEKPSQTHCPGRGKL*ISPHAA Trigger: CGCTGCATGTGGAGAGATTCAGAGCTTTCCTCTGCC...TGGGCAGTGGGTCTGACTTGGCTTCTCATTTGAAAGTAGTGGAAATTTATTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGCGCAGTGGAGCAAATaGCCTCCCTCGGCACGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSAQWSK*PPSARR Trigger: CCTGCGTGCCGAGGGAGGTCATTTGCTCCACTGCGC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR GCA 90 bp | TATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTGGATCCGTGGACATACTGCCGTaGATAGCCAATGTACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: YVSALLLSSETREEGIGSVDILP*IANVLP Trigger: AGGAAGTACATTGGCTATGCACGGCAGTATGTCCAC...GGATCCAATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR GCA 90 bp | TGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACAATAATGGAAGTTCTTaGAGGGAGGCTGCAAACTAC | + |
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Preference number: 4 (lower is better) Translates to: WLLGLELRTYGRAVSALNNNGSS*REAANY Trigger: GTAGTTTGCAGCCTCCCTGCAAGAACTTCCATTATT...GTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR GCA 90 bp | GTCAATAAATTTCCACTACTTTCAAATGAGAAGCCAAGTCAGACCCACTGCCCAATCAAAGACTCCAGCTaGCGAGTGGTGATGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VNKFPLLSNEKPSQTHCPIKDSS*RVVMGE Trigger: CTCACCCATCACCACTCGGCAGCTGGAGTCTTTGAT...TGGGCAGTGGGTCTGACTTGGCTTCTCATTTGAAAGTAGTGGAAATTTATTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTCTCATCCCAGAGCCATaGTGGGATCGCTCAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: FIYVSALLLSSETREEGILIPEP*WDRSKS Trigger: GGACTTTGAGCGATCCCAGCATGGCTCTGGGATGAG...AATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR CCA 90 bp | TGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACAGTCACTGTATCTCCTaGGACACAACTATCTACAAG | + |
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Preference number: 4 (lower is better) Translates to: WLLGLELRTYGRAVSALNSHCIS*DTTIYK Trigger: CTTGTAGATAGTTGTGTCCCAGGAGATACAGTGACT...GTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR CCA 90 bp | TGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACGTGGGTCTCCTCGAATaGGAATTCTGTTTTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: WLLGLELRTYGRAVSALNVGLLE*EFCFCH Trigger: ATGACAAAAACAGAATTCCCATTCGAGGAGACCCAC...GTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR CCA 90 bp | AGAAGAGGGCATTGGATCCCATTACAGATGGTTGTGAGTCACCATGTGGTTGCTAACAATCAGGACATGTaGGTCTCCTCGAATGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: RRGHWIPLQMVVSHHVVANNQDM*VSSNGN Trigger: ATTCCCATTCGAGGAGACCCACATGTCCTGATTGTT...AGCAACCACATGGTGACTCACAACCATCTGTAATGGGATCCAATGCCCTCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR CCA 90 bp | GGTTGTGAGTCACCATGTGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGTGTTCAGAAAGTAAGTaGTCATGCTGTTCATTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GCESPCGCWDLNSGPMEECSESK*SCCSFG Trigger: GCCAAATGAACAGCATGACCACTTACTTTCTGAACA...CTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTCACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| 3UTR CAA 72 bp | CACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATaGGATCCCATTACAGATGGTTGTGAGTCACCATGT | + |
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Preference number: 4 (lower is better) Translates to: HCYSLQRHEKRA*DPITDGCESPC Trigger: ACATGGTGACTCACAACCATCTGTAATGGGATCCAATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR GCA 90 bp | GTCAATAAATTTCCACTACTTTCAAATGAGAAGCCAAGTCAGACCCACTGCCCAACCAGCTTCTCTCTGTaGATCAGACATCAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: VNKFPLLSNEKPSQTHCPTSFSL*IRHQLL Trigger: CAGGAGCTGATGTCTGATGCACAGAGAGAAGCTGGT...TGGGCAGTGGGTCTGACTTGGCTTCTCATTTGAAAGTAGTGGAAATTTATTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR GCA 90 bp | ATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATCTGCTAACCGCTTTCTaGTTCCCAGCTCTTATCGCG | + |
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Preference number: 4 (lower is better) Translates to: IYLCECTVTLFRDTRRGHLLTAF*FPALIA Trigger: CGCGATAAGAGCTGGGAAGCAGAAAGCGGTTAGCAG...ATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR CCA 90 bp | TATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTGGATCCCCTCTTTTCCAGCTTTaGAATCTTCCTCGTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: YVSALLLSSETREEGIGSPLFQL*NLPRPK Trigger: TTTTGGACGAGGAAGATTCCAAAGCTGGAAAAGAGG...GGATCCAATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | GTCAATAAATTTCCACTACTTTCAAATGAGAAGCCAAGTCAGACCCACTGCCCATTAGACAATCCCTCTTaGGCTTGTAATTCGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: VNKFPLLSNEKPSQTHCPLDNPS*ACNSAA Trigger: TGCCGCCGAATTACAAGCTCAAGAGGGATTGTCTAA...TGGGCAGTGGGTCTGACTTGGCTTCTCATTTGAAAGTAGTGGAAATTTATTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCTTGCTCGGATATTCTTaGGGTGTGTCAAGGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RFIYVSALLLSSETREEGLLGYS*GVSRAH Trigger: ATGAGCCCTTGACACACCTCAAGAATATCCGAGCAA...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGAGGCTTTATGTTGCTaGCCCGGACCACAGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSEALCC*PGPQSL Trigger: GAGGGACTGTGGTCCGGGTCAGCAACATAAAGCCTC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGCTGCCTGTAGCATCTaGCTCTTCCCCAAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSAACSI*LFPKPG Trigger: TCCAGGCTTGGGGAAGAGTCAGATGCTACAGGCAGC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCAGAGGAACTGTCCTTTaGAAGAGTCACAGTGAGACC | + |
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Preference number: 4 (lower is better) Translates to: RFIYVSALLLSSETREEGRGTVL*KSHSET Trigger: GGTCTCACTGTGACTCTTTCAAAGGACAGTTCCTCT...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR TCA 90 bp | TTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACCACCATTCAGTGATCCAATaGAGTTTTCAAAATCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLGLELRTYGRAVSALNHHSVIQ*SFQNRQ Trigger: TTGCCGATTTTGAAAACTTCATTGGATCACTGAATG...GTGGTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCTCCATCAGTGTCCCATaGTTGCAACCATCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RFIYVSALLLSSETREEGSISVP*LQPSSA Trigger: TGCAGAAGATGGTTGCAAGCATGGGACACTGATGGA...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCACACGTGGCGCCACGTTaGATGCTGCCTGTAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSHVAPR*MLPVAS Trigger: AGATGCTACAGGCAGCATGCAACGTGGCGCCACGTG...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | AAGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGTCATCTGCGTACTTCTaGCTACCGCCAAAGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KIYLCECTVTLFRDTRRGSSAYF*LPPKSA Trigger: AGCACTCTTTGGCGGTAGCCAGAAGTACGCAGATGA...CCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGGCAGAGGAAAGCTCTaGATCTCTCCACATGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSGRGKL*ISPHAA Trigger: CGCTGCATGTGGAGAGATTCAGAGCTTTCCTCTGCC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | TATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTGGATCCCTATCTACAAGATCGTaGACAAGTTCACATTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: YVSALLLSSETREEGIGSLSTRS*TSSHSI Trigger: GATAGAATGTGAACTTGTTCACGATCTTGTAGATAG...GGATCCAATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCTGTAATTCGGCGGCATaGCTTTCAAGGTCCTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RFIYVSALLLSSETREEGCNSAA*LSRSLV Trigger: AACTAAGGACCTTGAAAGGCATGCCGCCGAATTACA...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | TTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTTCTGTTTTTGTCATCTaGGTACTTCTGGCTACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIYVSALLLSSETREEGISVFVI*VLLATA Trigger: GGCGGTAGCCAGAAGTACGCAGATGACAAAAACAGA...AATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATTCTTGCAGGGAGGCTaGAAACTACCCCAGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSFLQGG*KLPQPS Trigger: CGAAGGCTGGGGTAGTTTGCAGCCTCCCTGCAAGAA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCACTCATCCCAGAGCCATaGTGGGATCGCTCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSLIPEP*WDRSKS Trigger: GGACTTTGAGCGATCCCAGCATGGCTCTGGGATGAG...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCTACTCTGCTGTTCCATaGCTTCTAACAGGGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RFIYVSALLLSSETREEGYSAVP*LLTGLD Trigger: ATCAAGCCCTGTTAGAAGCCATGGAACAGCAGAGTA...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCGTAGTGTCCTCCGACTaGATTTGCAGCAGCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: RFIYVSALLLSSETREEGVVSSD*ICSSNN Trigger: ATTATTGCTGCTGCAAATCCAGTCGGAGGACACTAC...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAATCCCAGAGCCATGCTaGGATCGCTCAAAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSIPEPC*DRSKSR Trigger: CCTGGACTTTGAGCGATCCCAGCATGGCTCTGGGAT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | TGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACAAGTTGGTAAATCTTTaGGCCTTTCTTCAAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: WLLGLELRTYGRAVSALNKLVNL*AFLQEI Trigger: TATCTCTTGAAGAAAGGCCCAAAGATTTACCAACTT...GTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCACCACATGCAGCGCACTaGAAAGCCATGTTGGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSPHAAH*KAMLVQ Trigger: TTGCACCAACATGGCTTTTCAGTGCGCTGCATGTGG...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATTGAAAGAGTCACAGTaGGACCAGAGCTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSLKESQ*DQSWWW Trigger: CCACCACCAGCTCTGGTCTCACTGTGACTCTTTCAA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | TTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTGCAAGGCTAATACTCTaGTGTTCCATGGCTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FIYVSALLLSSETREEGIARLIL*CSMASN Trigger: GTTAGAAGCCATGGAACAGCAGAGTATTAGCCTTGC...AATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCACTGCTAACCGCTTTCTaGTTCCCAGCTCTTATCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSLLTAF*FPALIA Trigger: CGCGATAAGAGCTGGGAAGCAGAAAGCGGTTAGCAG...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAATCAAAGACTCCAGCTaGCGAGTGGTGATGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSIKDSS*RVVMGE Trigger: CTCACCCATCACCACTCGGCAGCTGGAGTCTTTGAT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATAAGTACAGAAGTATTTaGGTCTTGACTGAGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: IYLCECTVTLFRDTRRGHKYRSI*VLTEHT Trigger: CGTGTGCTCAGTCAAGACTCAAATACTTCTGTACTT...ATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATAAATCTTTTTGCTGTTaGCCTGTTGCTCATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYLCECTVTLFRDTRRGHKSFCC*PVAHPR Trigger: TCTGGGATGAGCAACAGGTCAACAGCAAAAAGATTT...ATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAACCAGCTTCTCTCTGTaGATCAGACATCAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSTSFSL*IRHQLL Trigger: CAGGAGCTGATGTCTGATGCACAGAGAGAAGCTGGT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATTGCTGTTGACCTGTTaGTCATCCCAGAGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSLLLTC*SSQSHA Trigger: AGCATGGCTCTGGGATGAGCAACAGGTCAACAGCAA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | GTCAATAAATTTCCACTACTTTCAAATGAGAAGCCAAGTCAGACCCACTGCCCAACTGAAAAGCCATGTTaGTGCAAAGAGGCTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: VNKFPLLSNEKPSQTHCPTEKPC*CKEALC Trigger: ACATAAAGCCTCTTTGCACCAACATGGCTTTTCAGT...TGGGCAGTGGGTCTGACTTGGCTTCTCATTTGAAAGTAGTGGAAATTTATTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATCATCTGCGTACTTCTaGCTACCGCCAAAGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSSAYF*LPPKSA Trigger: AGCACTCTTTGGCGGTAGCCAGAAGTACGCAGATGA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAACTCTTCCCCAAGCCTaGATCTCCAACAATCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSTLPQA*ISNNQD Trigger: GTCCTGATTGTTGGAGATCCAGGCTTGGGGAAGAGT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATTAGACAATCCCTCTTaGGCTTGTAATTCGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSLDNPS*ACNSAA Trigger: TGCCGCCGAATTACAAGCTCAAGAGGGATTGTCTAA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATTGCTCGGATATTCTTaGGGTGTGTCAAGGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSLLGYS*GVSRAH Trigger: ATGAGCCCTTGACACACCTCAAGAATATCCGAGCAA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAAGAGGAACTGTCCTTTaGAAGAGTCACAGTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSRGTVL*KSHSET Trigger: GGTCTCACTGTGACTCTTTCAAAGGACAGTTCCTCT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGCTTGTGCAGAAGCGTaGTTTCCTGAAGCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSACAEA*FPEASF Trigger: GAATGAAGCTTCAGGAAAGCACGCTTCTGCACAAGC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028831.15 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATCCATCAGTGTCCCATaGTTGCAACCATCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSISVP*LQPSSA Trigger: TGCAGAAGATGGTTGCAAGCATGGGACACTGATGGA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATCTGTTTTTGTCATCTaGGTACTTCTGGCTACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSVFVI*VLLATA Trigger: GGCGGTAGCCAGAAGTACGCAGATGACAAAAACAGA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGTGGACATACTGCCGTaGATAGCCAATGTACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSVDILP*IANVLP Trigger: AGGAAGTACATTGGCTATGCACGGCAGTATGTCCAC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGCTTTGACGAGTTCATaGCCAAAAATGACAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSALTSS*PKMTGQ Trigger: CTGTCCTGTCATTTTTGGTCATGAACTCGTCAAAGC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGCTTCTAACAGGGCTTaGTGTTGGTTCCCCATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSASNRA*CWFPIL Trigger: TAAAATGGGGAACCAACATCAAGCCCTGTTAGAAGC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTCAAAATCGGCAACCTaGATGTTTAGTTCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYLCECTVTLFRDTRRGHSKSAT*MFSSLA Trigger: TGCTAAAGAACTAAACATTCAGGTTGCCGATTTTGA...ATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATGTAATTCGGCGGCATaGCTTTCAAGGTCCTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSCNSAA*LSRSLV Trigger: AACTAAGGACCTTGAAAGGCATGCCGCCGAATTACA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | GTCAATAAATTTCCACTACTTTCAAATGAGAAGCCAAGTCAGACCCACTGCCCAGTTGCTAACAGAATTTaGCTCAATGTACAAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VNKFPLLSNEKPSQTHCPVANRI*LNVQKE Trigger: TTCCTTTTGTACATTGAGGCAAATTCTGTTAGCAAC...TGGGCAGTGGGTCTGACTTGGCTTCTCATTTGAAAGTAGTGGAAATTTATTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGCAAGGCTAATACTCTaGTGTTCCATGGCTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSARLIL*CSMASN Trigger: GTTAGAAGCCATGGAACAGCAGAGTATTAGCCTTGC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATCCTCCGACTGGATTTaGAGCAGCAATAATGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSSDWI*SSNNGS Trigger: ACTTCCATTATTGCTGCTGCAAATCCAGTCGGAGGA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATCAGACATCAGCTCCTaGATTTTGATCAACTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSDISS*ILINCQ Trigger: CTGGCAGTTGATCAAAATCCAGGAGCTGATGTCTGA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAAACAATCAGGACATGTaGGTCTCCTCGAATGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSNNQDM*VSSNGN Trigger: ATTCCCATTCGAGGAGACCCACATGTCCTGATTGTT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATACTCTGCTGTTCCATaGCTTCTAACAGGGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSYSAVP*LLTGLD Trigger: ATCAAGCCCTGTTAGAAGCCATGGAACAGCAGAGTA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGTAGTGTCCTCCGACTaGATTTGCAGCAGCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSVVSSD*ICSSNN Trigger: ATTATTGCTGCTGCAAATCCAGTCGGAGGACACTAC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAAAGTACAGAAGTATTTaGGTCTTGACTGAGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSKYRSI*VLTEHT Trigger: CGTGTGCTCAGTCAAGACTCAAATACTTCTGTACTT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAAAATCTTTTTGCTGTTaGCCTGTTGCTCATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSKSFCC*PVAHPR Trigger: TCTGGGATGAGCAACAGGTCAACAGCAAAAAGATTT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAAATAATGGAAGTTCTTaGAGGGAGGCTGCAAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSNNGSS*REAANY Trigger: GTAGTTTGCAGCCTCCCTGCAAGAACTTCCATTATT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCACCTCTTTTCCAGCTTTaGAATCTTCCTCGTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSPLFQL*NLPRPK Trigger: TTTTGGACGAGGAAGATTCCAAAGCTGGAAAAGAGG...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAAGTCACTGTATCTCCTaGGACACAACTATCTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSHCIS*DTTIYK Trigger: CTTGTAGATAGTTGTGTCCCAGGAGATACAGTGACT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGTGGGTCTCCTCGAATaGGAATTCTGTTTTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSVGLLE*EFCFCH Trigger: ATGACAAAAACAGAATTCCCATTCGAGGAGACCCAC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATCTCAGAAACCGTTCTaGCTTTATTGTAGTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSQKPF*LYCSVL Trigger: GAGGACACTACAATAAAGCCAGAACGGTTTCTGAGA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAACTGAAAAGCCATGTTaGTGCAAAGAGGCTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSTEKPC*CKEALC Trigger: ACATAAAGCCTCTTTGCACCAACATGGCTTTTCAGT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATGTTCAGAAAGTAAGTaGTCATGCTGTTCATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSCSESK*SCCSFG Trigger: GCCAAATGAACAGCATGACCACTTACTTTCTGAACA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCACTATCTACAAGATCGTaGACAAGTTCACATTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSLSTRS*TSSHSI Trigger: GATAGAATGTGAACTTGTTCACGATCTTGTAGATAG...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATCAAAATCGGCAACCTaGATGTTTAGTTCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSKSAT*MFSSLA Trigger: TGCTAAAGAACTAAACATTCAGGTTGCCGATTTTGA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR TCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCACATTCAGTGATCCAATaGAGTTTTCAAAATCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSHSVIQ*SFQNRQ Trigger: TTGCCGATTTTGAAAACTTCATTGGATCACTGAATG...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGTTGCTAACAGAATTTaGCTCAATGTACAAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSVANRI*LNVQKE Trigger: TTCCTTTTGTACATTGAGGCAAATTCTGTTAGCAAC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAAAGTTGGTAAATCTTTaGGCCTTTCTTCAAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSKLVNL*AFLQEI Trigger: TATCTCTTGAAGAAAGGCCCAAAGATTTACCAACTT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS TCA 90 bp | CCCGTGCCTCTGTCAGACGGATCAAAGACTCCAGCTGCCGAGTGGTaGTGGGTGAGCTGCCCACGCGCTGGCTCTGCTTGCGGAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVPLSDGSKTPAAEW*WVSCPRAGSACGAP Trigger: TGGAGCTCCGCAAGCAGAGCCAGCGCGTGGGCAGCTCACCCATCACCACTCGGCAGCTGGAGTCTTTGATCCGTCTGACAGAGGCACGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS TCA 90 bp | CTCTGTCAGACGGATCAAAGACTCCAGCTGCCGAGTGGTGATGGGTaGGCTGCCCACGCGCTGGCTCTGCTTGCGGAGCTCCAGGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LCQTDQRLQLPSGDG*AAHALALLAELQVE Trigger: TTCTACCTGGAGCTCCGCAAGCAGAGCCAGCGCGTGGGCAGCTCACCCATCACCACTCGGCAGCTGGAGTCTTTGATCCGTCTGACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS GCA 90 bp | TCTAACCTTGCCCGTGCCTCTGTCAGACGGATCAAAGACTCCAGCTaGCGAGTGGTGATGGGTGAGCTGCCCACGCGCTGGCTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SNLARASVRRIKDSS*RVVMGELPTRWLCL Trigger: CAAGCAGAGCCAGCGCGTGGGCAGCTCACCCATCACCACTCGGCAGCTGGAGTCTTTGATCCGTCTGACAGAGGCACGGGCAAGGTTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS TCA 90 bp | ACATACACACCACGTGGCGCCACGTTGCATGCTGCCTGTAGCATCTaGCTCTTCCCCAAGCCTGGATCTCCAACAATCAGGACATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TYTPRGATLHAACSI*LFPKPGSPTIRTCG Trigger: CCCACATGTCCTGATTGTTGGAGATCCAGGCTTGGGGAAGAGTCAGATGCTACAGGCAGCATGCAACGTGGCGCCACGTGGTGTGTATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS GCA 90 bp | GTAGTGTCCTCCGACTGGATTTGCAGCAGCAATAATGGAAGTTCTTaGAGGGAGGCTGCAAACTACCCCAGCCTTCGCAAGGCTAATACT | + |
|
Preference number: 5 (lower is better) Translates to: VVSSDWICSSNNGSS*REAANYPSLRKANT Trigger: AGTATTAGCCTTGCGAAGGCTGGGGTAGTTTGCAGCCTCCCTGCAAGAACTTCCATTATTGCTGCTGCAAATCCAGTCGGAGGACACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS CCA 90 bp | GCACGCAGGCACAGGACACTTTGTAGGAAGGGTGTATTTTCCATCTaGCAGAGGAAAGCTCTGAATCTCTCCACATGCAGCGCACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ARRHRTLCRKGVFSI*QRKALNLSTCSALK Trigger: TTTCAGTGCGCTGCATGTGGAGAGATTCAGAGCTTTCCTCTGCCAGATGGAAAATACACCCTTCCTACAAAGTGTCCTGTGCCTGCGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACCACTTTGCTGTTGACCTGTaGCTCATCCCAGAGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LLGLELRTYGRAVSALNHFAVDL*LIPEPC Trigger: GCATGGCTCTGGGATGAGCAACAGGTCAACAGCAAA...GTGGTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS GCA 90 bp | AAGTTCACATTCTATCGTCCGAGGGATCCGACCAGCTTCTCTCTGTaGATCAGACATCAGCTCCTGGATTTTGATCAACTGCCAGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KFTFYRPRDPTSFSL*IRHQLLDFDQLPVQ Trigger: CTGGACTGGCAGTTGATCAAAATCCAGGAGCTGATGTCTGATGCACAGAGAGAAGCTGGTCGGATCCCTCGGACGATAGAATGTGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS CCA 90 bp | CCAAGCCTGGATCTCCAACAATCAGGACATGTGGGTCTCCTCGAATaGGAATTCTGTTTTTGTCATCTGCGTACTTCTGGCTACCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PSLDLQQSGHVGLLE*EFCFCHLRTSGYRQ Trigger: TTGGCGGTAGCCAGAAGTACGCAGATGACAAAAACAGAATTCCCATTCGAGGAGACCCACATGTCCTGATTGTTGGAGATCCAGGCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS TCA 90 bp | CAGACCTGCTTTGACGAGTTCATGACCAAAAATGACAGGACAGAGTaGGTTGACAACGAGCTTGAGCAGGTTCTCTTCAGCCTGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTCFDEFMTKNDRTE*VDNELEQVLFSLDL Trigger: GAGATCCAGGCTGAAGAGAACCTGCTCAAGCTCGTTGTCAACTCACTCTGTCCTGTCATTTTTGGTCATGAACTCGTCAAAGCAGGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS GCA 90 bp | TTTAAGGGAGAACTCCATCAGTGTCCCATGCTTGCAACCATCTTCTaGAGTCTGTGCTTTCGGCCCCTTGCTGTTGCTAACAGAATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FKGELHQCPMLATIF*SLCFRPLAVANRIC Trigger: GCAAATTCTGTTAGCAACAGCAAGGGGCCGAAAGCACAGACTGCAGAAGATGGTTGCAAGCATGGGACACTGATGGAGTTCTCCCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR CAA 90 bp | GGTTGTGAGTCACCATGTGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGTCCTCTTTTCCAGCTTaGGAATCTTCCTCGTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GCESPCGCWDLNSGPMEESSFPA*ESSSSK Trigger: TTTGGACGAGGAAGATTCCAAAGCTGGAAAAGAGGA...CTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGTGACTCACAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | TGTGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTATTAATACCTGATGTATaGCCAGCCCCATACACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CGCWDLNSGPMEEQSVLLLIPDV*PAPYTP Trigger: TGGCGTGTATGGGGCTGGCAATACATCAGGTATTAA...TAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS GCA 90 bp | CCGGACCACAGTCCCTCGTATAGAGATGTATTTCCCATAGCAAGTTaGTCGGATATTCTTGAGGTGTGTCAAGGGCTCATAGTTGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: PDHSPSYRDVFPIAS*SDILEVCQGLIVVH Trigger: GTGTACAACTATGAGCCCTTGACACACCTCAAGAATATCCGAGCAACTTGCTATGGGAAATACATCTCTATACGAGGGACTGTGGTCCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 90 bp | CTCAGAAACCGTTCTGGCTTTATTGTAGTGTCCTCCGACTGGATTTaGAGCAGCAATAATGGAAGTTCTTGCAGGGAGGCTGCAAACTAC | + |
|
Preference number: 5 (lower is better) Translates to: LRNRSGFIVVSSDWI*SSNNGSSCREAANY Trigger: GTAGTTTGCAGCCTCCCTGCAAGAACTTCCATTATTGCTGCTGCAAATCCAGTCGGAGGACACTACAATAAAGCCAGAACGGTTTCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS TCA 90 bp | GTAACAGTCACTGTATCTCCTGGGACACAACTATCTACAAGATCGTaGACAAGTTCACATTCTATCGTCCGAGGGATCCGACCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTVTVSPGTQLSTRS*TSSHSIVRGIRPAS Trigger: AGAAGCTGGTCGGATCCCTCGGACGATAGAATGTGAACTTGTTCACGATCTTGTAGATAGTTGTGTCCCAGGAGATACAGTGACTGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS GCA 90 bp | GGTGTATTTTCCATCTGGCAGAGGAAAGCTCTGAATCTCTCCACATaGAGCGCACTGAAAAGCCATGTTGGTGCAAAGAGGCTTTATGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVFSIWQRKALNLST*SALKSHVGAKRLYV Trigger: AACATAAAGCCTCTTTGCACCAACATGGCTTTTCAGTGCGCTGCATGTGGAGAGATTCAGAGCTTTCCTCTGCCAGATGGAAAATACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS TCA 90 bp | AATGGTTTCTCAGAAACCACTTCAAGTACAGAAGTATTTGAGTCTTaGCTGAGCACACGAGTGACTGTGGCACTGCTAACCGCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NGFSETTSSTEVFES*LSTRVTVALLTAFC Trigger: GCAGAAAGCGGTTAGCAGTGCCACAGTCACTCGTGTGCTCAGTCAAGACTCAAATACTTCTGTACTTGAAGTGGTTTCTGAGAAACCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS TCA 90 bp | TCTTTCAGCAATGCTGTTGAGAGCAGAAATAAATCTTTTTGCTGTTaGCCTGTTGCTCATCCCAGAGCCATGCTGGGATCGCTCAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSNAVESRNKSFCC*PVAHPRAMLGSLKV Trigger: GACTTTGAGCGATCCCAGCATGGCTCTGGGATGAGCAACAGGTCAACAGCAAAAAGATTTATTTCTGCTCTCAACAGCATTGCTGAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | TTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTCAAAGAGGCTTTATGTaGCTGACCCGGACCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FIYVSALLLSSETREEGIQRGFM*LTRTTV Trigger: GACTGTGGTCCGGGTCAGCAACATAAAGCCTCTTTG...AATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | TGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACGAAGTTGGTAAATCTTaGGGCCTTTCTTCAAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: WLLGLELRTYGRAVSALNEVGKS*GLSSRD Trigger: ATCTCTTGAAGAAAGGCCCAAAGATTTACCAACTTC...GTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS TCA 90 bp | TGTGGTACATTTACCATTGTCTCTCCACCGTTAGACAATCCCTCTTaGGCTTGTAATTCGGCGGCATGCCTTTCAAGGTCCTTAGTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: CGTFTIVSPPLDNPS*ACNSAACLSRSLVN Trigger: ATTAACTAAGGACCTTGAAAGGCATGCCGCCGAATTACAAGCTCAAGAGGGATTGTCTAACGGTGGAGAGACAATGGTAAATGTACCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | TGGTTGCTGGGACTTGAACTCAGGACCTATGGAAGAGCAGTCAGTGCTCTTAACCTTTCAGCAATGCTGTaGAGAGCAGAAATAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLLGLELRTYGRAVSALNLSAML*RAEINL Trigger: AAGATTTATTTCTGCTCTCAACAGCATTGCTGAAAG...GTTAAGAGCACTGACTGCTCTTCCATAGGTCCTGAGTTCAAGTCCCAGCAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | TTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTATCAGCTCCTGGATTTaGATCAACTGCCAGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FIYVSALLLSSETREEGIISSWI*INCQSS Trigger: ACTGGACTGGCAGTTGATCAAAATCCAGGAGCTGAT...AATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCACAAAGAGGCTTTATGTaGCTGACCCGGACCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSQRGFM*LTRTTV Trigger: GACTGTGGTCCGGGTCAGCAACATAAAGCCTCTTTG...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATGGGAATTCTGTTTTaGTCATCTGCGTACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RFIYVSALLLSSETREEGMGILF*SSAYFW Trigger: CCAGAAGTACGCAGATGACAAAAACAGAATTCCCAT...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATTTGCTGTTGACCTGTaGCTCATCCCAGAGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSFAVDL*LIPEPC Trigger: GCATGGCTCTGGGATGAGCAACAGGTCAACAGCAAA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS CCA 90 bp | TTCTGCTTCCCAGCTCTTATCGCGATCACATGTTCAGAAAGTAAGTaGTCATGCTGTTCATTTGGCGTATCTAACAAGATAAAGACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FCFPALIAITCSESK*SCCSFGVSNKIKTK Trigger: TTTGGTCTTTATCTTGTTAGATACGCCAAATGAACAGCATGACCACTTACTTTCTGAACATGTGATCGCGATAAGAGCTGGGAAGCAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGTTGCTCGGATATTCTaGAGGTGTGTCAAGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSVARIF*RCVKGS Trigger: TGAGCCCTTGACACACCTCAAGAATATCCGAGCAAC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATTAATACCTGATGTATaGCCAGCCCCATACACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSLIPDV*PAPYTP Trigger: TGGCGTGTATGGGGCTGGCAATACATCAGGTATTAA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAATCAGCTCCTGGATTTaGATCAACTGCCAGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSISSWI*INCQSS Trigger: ACTGGACTGGCAGTTGATCAAAATCCAGGAGCTGAT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR CAA 90 bp | TTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCATTTCAGAATTGGAGACTTaGACAATTCCAGTAACAGTC | + |
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Preference number: 5 (lower is better) Translates to: FIYVSALLLSSETREEGISELET*TIPVTV Trigger: GACTGTTACTGGAATTGTCAAAGTCTCCAATTCTGA...AATGCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS-3UTR CAA 90 bp | AGATTTATTTATGTGAGTGCACTGTTACTCTCTTCAGAGACACGAGAAGAGGGCTCACATAGTTTGAAGTaGGTAAATCTTTGGGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: RFIYVSALLLSSETREEGSHSLK*VNLWAF Trigger: AAAGGCCCAAAGATTTACCAACTTCAAACTATGTGA...GCCCTCTTCTCGTGTCTCTGAAGAGAGTAACAGTGCACTCACATAAATAAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066559.6 |
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| CDS CCA 90 bp | AGAATTGGAGACTTTGACAATTCCAGTAACAGTCACTGTATCTCCTaGGACACAACTATCTACAAGATCGTGAACAAGTTCACATTCTAT | + |
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Preference number: 5 (lower is better) Translates to: RIGDFDNSSNSHCIS*DTTIYKIVNKFTFY Trigger: ATAGAATGTGAACTTGTTCACGATCTTGTAGATAGTTGTGTCCCAGGAGATACAGTGACTGTTACTGGAATTGTCAAAGTCTCCAATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATCCTCTTTTCCAGCTTaGGAATCTTCCTCGTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSSFPA*ESSSSK Trigger: TTTGGACGAGGAAGATTCCAAAGCTGGAAAAGAGGA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAATGGGAATTCTGTTTTaGTCATCTGCGTACTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSMGILF*SSAYFW Trigger: CCAGAAGTACGCAGATGACAAAAACAGAATTCCCAT...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATCAGAATTGGAGACTTaGACAATTCCAGTAACAGTC | + |
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Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSELET*TIPVTV Trigger: GACTGTTACTGGAATTGTCAAAGTCTCCAATTCTGA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCAGAAGTTGGTAAATCTTaGGGCCTTTCTTCAAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSEVGKS*GLSSRD Trigger: ATCTCTTGAAGAAAGGCCCAAAGATTTACCAACTTC...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCACTTTCAGCAATGCTGTaGAGAGCAGAAATAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSLSAML*RAEINL Trigger: AAGATTTATTTCTGCTCTCAACAGCATTGCTGAAAG...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS-3UTR CAA 90 bp | ACTCTTCTGGATAAATTATGGATAGGCCTTTATTCTGTTATAGGAGTTGTGTCATCACATAGTTTGAAGTaGGTAAATCTTTGGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLLDKLWIGLYSVIGVVSSHSLK*VNLWAF Trigger: AAAGGCCCAAAGATTTACCAACTTCAAACTATGTGA...TGACACAACTCCTATAACAGAATAAAGGCCTATCCATAATTTATCCAGAAGAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS TCA 72 bp | CTGTCAGACGGATCAAAGACTCCAGCTGCCGAGTGGTaGTGGGTGAGCTGCCCACGCGCTGGCTCTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LSDGSKTPAAEW*WVSCPRAGSAC Trigger: GCAAGCAGAGCCAGCGCGTGGGCAGCTCACCCATCACCACTCGGCAGCTGGAGTCTTTGATCCGTCTGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS TCA 72 bp | CCACGTGGCGCCACGTTGCATGCTGCCTGTAGCATCTaGCTCTTCCCCAAGCCTGGATCTCCAACAATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRGATLHAACSI*LFPKPGSPTIR Trigger: CCTGATTGTTGGAGATCCAGGCTTGGGGAAGAGTCAGATGCTACAGGCAGCATGCAACGTGGCGCCACGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | GAACTCCATCAGTGTCCCATGCTTGCAACCATCTTCTaGAGTCTGTGCTTTCGGCCCCTTGCTGTTGCTAAC | + |
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Preference number: 6 (lower is better) Translates to: ELHQCPMLATIF*SLCFRPLAVAN Trigger: GTTAGCAACAGCAAGGGGCCGAAAGCACAGACTGCAGAAGATGGTTGCAAGCATGGGACACTGATGGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | TATTTCCACAAACATACACACCACGTGGCGCCACGTTaGATGCTGCCTGTAGCATCTGACTCTTCCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: YFHKHTHHVAPR*MLPVASDSSPS Trigger: GCTTGGGGAAGAGTCAGATGCTACAGGCAGCATGCAACGTGGCGCCACGTGGTGTGTATGTTTGTGGAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | TCCGACTGGATTTGCAGCAGCAATAATGGAAGTTCTTaGAGGGAGGCTGCAAACTACCCCAGCCTTCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SDWICSSNNGSS*REAANYPSLRK Trigger: CTTGCGAAGGCTGGGGTAGTTTGCAGCCTCCCTGCAAGAACTTCCATTATTGCTGCTGCAAATCCAGTCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CAA 72 bp | AGGTCTTTAAGGGAGAACTCCATCAGTGTCCCATGCTaGCAACCATCTTCTGCAGTCTGTGCTTTCGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RSLRENSISVPC*QPSSAVCAFGP Trigger: GGGGCCGAAAGCACAGACTGCAGAAGATGGTTGCAAGCATGGGACACTGATGGAGTTCTCCCTTAAAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | TCCATCTGGCAGAGGAAAGCTCTGAATCTCTCCACATaGAGCGCACTGAAAAGCCATGTTGGTGCAAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SIWQRKALNLST*SALKSHVGAKR Trigger: CCTCTTTGCACCAACATGGCTTTTCAGTGCGCTGCATGTGGAGAGATTCAGAGCTTTCCTCTGCCAGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | TGTGCATCAGACATCAGCTCCTGGATTTTGATCAACTaGCAGTCCAGTGTAACTGTGAGAGGAGAGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: CASDISSWILIN*QSSVTVRGELR Trigger: GCGCAGCTCTCCTCTCACAGTTACACTGGACTGGCAGTTGATCAAAATCCAGGAGCTGATGTCTGATGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | CAGTGTCCCATGCTTGCAACCATCTTCTGCAGTCTGTaGTTTCGGCCCCTTGCTGTTGCTAACAGAATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QCPMLATIFCSL*FRPLAVANRIC Trigger: GCAAATTCTGTTAGCAACAGCAAGGGGCCGAAAGCACAGACTGCAGAAGATGGTTGCAAGCATGGGACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | AGCACACGAGTGACTGTGGCACTGCTAACCGCTTTCTaGTTCCCAGCTCTTATCGCGATCACATGTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: STRVTVALLTAF*FPALIAITCSE Trigger: TTCTGAACATGTGATCGCGATAAGAGCTGGGAAGCAGAAAGCGGTTAGCAGTGCCACAGTCACTCGTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CCA 72 bp | CCGTGCATAGCCAATGTACTTCCTCAACAGCTGATGTaGAATCGGATCTGTCTGTTCTCCAGGAGCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: PCIANVLPQQLM*NRICLFSRSHL Trigger: AAGGTGGCTCCTGGAGAACAGACAGATCCGATTCCACATCAGCTGTTGAGGAAGTACATTGGCTATGCACGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS TCA 72 bp | TCGGCGGCATGCCTTTCAAGGTCCTTAGTTAATACCTaGTGTATTGCCAGCCCCATACACGCCAGTGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SAACLSRSLVNT*CIASPIHASVF Trigger: GAAAACACTGGCGTGTATGGGGCTGGCAATACATCAGGTATTAACTAAGGACCTTGAAAGGCATGCCGCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | TTCTATCGTCCGAGGGATCCGACCAGCTTCTCTCTGTaGATCAGACATCAGCTCCTGGATTTTGATCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: FYRPRDPTSFSL*IRHQLLDFDQL Trigger: CAGTTGATCAAAATCCAGGAGCTGATGTCTGATGCACAGAGAGAAGCTGGTCGGATCCCTCGGACGATAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | CTTTTTGCTGTTGACCTGTTGCTCATCCCAGAGCCATaGTGGGATCGCTCAAAGTCCAGGTTTCCGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: LFAVDLLLIPEP*WDRSKSRFPNS Trigger: TGAATTCGGAAACCTGGACTTTGAGCGATCCCAGCATGGCTCTGGGATGAGCAACAGGTCAACAGCAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CCA 72 bp | TTTGCTGTTGACCTGTTGCTCATCCCAGAGCCATGCTaGGATCGCTCAAAGTCCAGGTTTCCGAATTCATCT | + |
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Preference number: 6 (lower is better) Translates to: FAVDLLLIPEPC*DRSKSRFPNSS Trigger: AGATGAATTCGGAAACCTGGACTTTGAGCGATCCCAGCATGGCTCTGGGATGAGCAACAGGTCAACAGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CAA 72 bp | CCAAAAATGACAGGACAGAGTGAGTTGACAACGAGCTaGAGCAGGTTCTCTTCAGCCTGGATCTCTCGGATG | + |
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Preference number: 6 (lower is better) Translates to: PKMTGQSELTTS*SRFSSAWISRM Trigger: CATCCGAGAGATCCAGGCTGAAGAGAACCTGCTCAAGCTCGTTGTCAACTCACTCTGTCCTGTCATTTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS TCA 72 bp | TTTACCATTGTCTCTCCACCGTTAGACAATCCCTCTTaGGCTTGTAATTCGGCGGCATGCCTTTCAAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: FTIVSPPLDNPS*ACNSAACLSRS Trigger: GGACCTTGAAAGGCATGCCGCCGAATTACAAGCTCAAGAGGGATTGTCTAACGGTGGAGAGACAATGGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | CGTTCTGGCTTTATTGTAGTGTCCTCCGACTGGATTTaGAGCAGCAATAATGGAAGTTCTTGCAGGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSGFIVVSSDWI*SSNNGSSCREA Trigger: AGCCTCCCTGCAAGAACTTCCATTATTGCTGCTGCAAATCCAGTCGGAGGACACTACAATAAAGCCAGAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CCA 72 bp | CACAGGACACTTTGTAGGAAGGGTGTATTTTCCATCTaGCAGAGGAAAGCTCTGAATCTCTCCACATGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HRTLCRKGVFSI*QRKALNLSTCS Trigger: GCTGCATGTGGAGAGATTCAGAGCTTTCCTCTGCCAGATGGAAAATACACCCTTCCTACAAAGTGTCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CCA 72 bp | CTTCCCCAAGCCTGGATCTCCAACAATCAGGACATGTaGGTCTCCTCGAATGGGAATTCTGTTTTTGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LPQAWISNNQDM*VSSNGNSVFVI Trigger: GATGACAAAAACAGAATTCCCATTCGAGGAGACCCACATGTCCTGATTGTTGGAGATCCAGGCTTGGGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CAA 90 bp | GTCCCATGCTTGCAACCATCTTCTGCAGTCTGTGCTTTCGGCCCCTaGCTGTTGCTAACAGAATTTGCCTCAATGTACAAAAGGAACATG | + |
|
Preference number: 6 (lower is better) Translates to: VPCLQPSSAVCAFGP*LLLTEFASMYKRNM Trigger: CATGTTCCTTTTGTACATTGAGGCAAATTCTGTTAGCAACAGCAAGGGGCCGAAAGCACAGACTGCAGAAGATGGTTGCAAGCATGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CCA 72 bp | GATCTCCAACAATCAGGACATGTGGGTCTCCTCGAATaGGAATTCTGTTTTTGTCATCTGCGTACTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DLQQSGHVGLLE*EFCFCHLRTSG Trigger: GCCAGAAGTACGCAGATGACAAAAACAGAATTCCCATTCGAGGAGACCCACATGTCCTGATTGTTGGAGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CAA 72 bp | CCATCTTCTGCAGTCTGTGCTTTCGGCCCCTTGCTGTaGCTAACAGAATTTGCCTCAATGTACAAAAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PSSAVCAFGPLL*LTEFASMYKRN Trigger: GTTCCTTTTGTACATTGAGGCAAATTCTGTTAGCAACAGCAAGGGGCCGAAAGCACAGACTGCAGAAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CAA 90 bp | TGCTTGCAACCATCTTCTGCAGTCTGTGCTTTCGGCCCCTTGCTGTaGCTAACAGAATTTGCCTCAATGTACAAAAGGAACATGCACTTA | + |
|
Preference number: 6 (lower is better) Translates to: CLQPSSAVCAFGPLL*LTEFASMYKRNMHL Trigger: TAAGTGCATGTTCCTTTTGTACATTGAGGCAAATTCTGTTAGCAACAGCAAGGGGCCGAAAGCACAGACTGCAGAAGATGGTTGCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS TCA 72 bp | ACTGTATCTCCTGGGACACAACTATCTACAAGATCGTaGACAAGTTCACATTCTATCGTCCGAGGGATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TVSPGTQLSTRS*TSSHSIVRGIR Trigger: TCGGATCCCTCGGACGATAGAATGTGAACTTGTTCACGATCTTGTAGATAGTTGTGTCCCAGGAGATACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS TCA 72 bp | TTTGACGAGTTCATGACCAAAAATGACAGGACAGAGTaGGTTGACAACGAGCTTGAGCAGGTTCTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FDEFMTKNDRTE*VDNELEQVLFS Trigger: GCTGAAGAGAACCTGCTCAAGCTCGTTGTCAACTCACTCTGTCCTGTCATTTTTGGTCATGAACTCGTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS TCA 72 bp | AATGCTGTTGAGAGCAGAAATAAATCTTTTTGCTGTTaGCCTGTTGCTCATCCCAGAGCCATGCTGGGATCG | + |
|
Preference number: 6 (lower is better) Translates to: NAVESRNKSFCC*PVAHPRAMLGS Trigger: CGATCCCAGCATGGCTCTGGGATGAGCAACAGGTCAACAGCAAAAAGATTTATTTCTGCTCTCAACAGCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CAA 72 bp | TTGCAACCATCTTCTGCAGTCTGTGCTTTCGGCCCCTaGCTGTTGCTAACAGAATTTGCCTCAATGTACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LQPSSAVCAFGP*LLLTEFASMYK Trigger: TTTGTACATTGAGGCAAATTCTGTTAGCAACAGCAAGGGGCCGAAAGCACAGACTGCAGAAGATGGTTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS TCA 72 bp | TGGTTTCTCAGAAACCACTTCAAGTACAGAAGTATTTaGGTCTTGACTGAGCACACGAGTGACTGTGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: WFLRNHFKYRSI*VLTEHTSDCGT Trigger: AGTGCCACAGTCACTCGTGTGCTCAGTCAAGACTCAAATACTTCTGTACTTGAAGTGGTTTCTGAGAAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS GCA 72 bp | AGTCCCTCGTATAGAGATGTATTTCCCATAGCAAGTTaGTCGGATATTCTTGAGGTGTGTCAAGGGCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: SPSYRDVFPIAS*SDILEVCQGLI Trigger: TATGAGCCCTTGACACACCTCAAGAATATCCGAGCAACTTGCTATGGGAAATACATCTCTATACGAGGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CCA 72 bp | GACTTTGACAATTCCAGTAACAGTCACTGTATCTCCTaGGACACAACTATCTACAAGATCGTGAACAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: DFDNSSNSHCIS*DTTIYKIVNKF Trigger: GAACTTGTTCACGATCTTGTAGATAGTTGTGTCCCAGGAGATACAGTGACTGTTACTGGAATTGTCAAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CCA 72 bp | CCAGCTCTTATCGCGATCACATGTTCAGAAAGTAAGTaGTCATGCTGTTCATTTGGCGTATCTAACAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: PALIAITCSESK*SCCSFGVSNKI Trigger: TATCTTGTTAGATACGCCAAATGAACAGCATGACCACTTACTTTCTGAACATGTGATCGCGATAAGAGCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS TCA 72 bp | TGGGCCTTTCTTCAAGAGATAACCTTGGTCATTCAGTaGTCCAATGAAGTTTTCAAAATCGGCAACCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: WAFLQEITLVIQ*SNEVFKIGNLN Trigger: ATTCAGGTTGCCGATTTTGAAAACTTCATTGGATCACTGAATGACCAAGGTTATCTCTTGAAGAAAGGCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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| CDS CCA 72 bp | CAAGGGCTCATAGTTGTACACTCTTGCATAAATATGTaGTACATTTACCATTGTCTCTCCACCGTTAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: QGLIVVHSCINM*YIYHCLSTVRQ Trigger: TTGTCTAACGGTGGAGAGACAATGGTAAATGTACCACATATTTATGCAAGAGTGTACAACTATGAGCCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028831.15 ENSMUST00000066559.6 |
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