Pregenerated sensors for MCM6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026355Ensembl transcript IDs: ENSMUST00000027601.11, ENSMUST00000190495.2
Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCATTGGATCCCATTCAGGATGGTTGTGAGCCATCATGTGGCTGCTaGACTCAGGACCTCTGGAAGATCAGCCCCAGGTATCCTACACAT | + |
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Preference number: 1 (lower is better) Translates to: ALDPIQDGCEPSCGC*TQDLWKISPRYPTH Trigger: ATGTGTAGGATACCTGGGGCTGATCTTCCAGAGGTCCTGAGTTCAGCAGCCACATGATGGCTCACAACCATCCTGAATGGGATCCAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR TCA 90 bp | AAGAGACATCCAAAAGAGGGCATTGGATCCCATTCAGGATGGTTGTaGGCCATCATGTGGCTGCTGAACTCAGGACCTCTGGAAGATCAG | + |
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Preference number: 1 (lower is better) Translates to: KRHPKEGIGSHSGWL*AIMWLLNSGPLEDQ Trigger: CTGATCTTCCAGAGGTCCTGAGTTCAGCAGCCACATGATGGCTCACAACCATCCTGAATGGGATCCAATGCCCTCTTTTGGATGTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR CCA 90 bp | TACATGAGCACACTGTCTGAAGAAGAGACATCCAAAAGAGGGCATTaGATCCCATTCAGGATGGTTGTGAGCCATCATGTGGCTGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: YMSTLSEEETSKRGH*IPFRMVVSHHVAAE Trigger: TTCAGCAGCCACATGATGGCTCACAACCATCCTGAATGGGATCCAATGCCCTCTTTTGGATGTCTCTTCTTCAGACAGTGTGCTCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR CCA 90 bp | AAATGTCCGATACTTACACTTTCCTGTTTCCTCTCGATAAGGCCCTaGACAGAACCTTACCTTCAACCATTATCAGTGCTCTGCTCAACC | + |
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Preference number: 1 (lower is better) Translates to: KCPILTLSCFLSIRP*TEPYLQPLSVLCST Trigger: GGTTGAGCAGAGCACTGATAATGGTTGAAGGTAAGGTTCTGTCCAGGGCCTTATCGAGAGGAAACAGGAAAGTGTAAGTATCGGACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR CCA 90 bp | CTTTCACTCATTTATTACGAAGGCTCATACCCAGTCTCTCAGAACTaGGAACAGGTCCAAGCCCACAATGGTGGTATACATCCTAGAATA | + |
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Preference number: 1 (lower is better) Translates to: LSLIYYEGSYPVSQN*EQVQAHNGGIHPRI Trigger: TATTCTAGGATGTATACCACCATTGTGGGCTTGGACCTGTTCCCAGTTCTGAGAGACTGGGTATGAGCCTTCGTAATAAATGAGTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR TCA 90 bp | AAACAACATGATTTGGTTCCAACTTCAATAGTACAAGAAGCCTATTaGCAGAGTGCCCAAGCCTGTCCCAGTATGAAATTCACAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: KQHDLVPTSIVQEAY*QSAQACPSMKFTEP Trigger: TGGCTCTGTGAATTTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATTGAAGTTGGAACCAAATCATGTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| 3UTR TCA 90 bp | GCAGTGGCTGGGAACAGAAGAAAGCAATTTCCACAGACACATGTATaGCAAATGCAGCAGGCTTTTCCTATACATGAAGAAATGTCTTAT | + |
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Preference number: 1 (lower is better) Translates to: AVAGNRRKQFPQTHV*QMQQAFPIHEEMSY Trigger: ATAAGACATTTCTTCATGTATAGGAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGTTCCCAGCCACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| 3UTR GCA 90 bp | CTGGGAACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATaGAGCAGGCTTTTCCTATACATGAAGAAATGTCTTATAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: LGTEESNFHRHMYDK*SRLFLYMKKCLIET Trigger: TGTTTCTATAAGACATTTCTTCATGTATAGGAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGTTCCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGGGTGGGAGTGGGGCCGAGGATCAGGTACTGCTAGTGGTCCGGTTGAGACTCAGCCATCACTTCTaGAATCCTCCTCAAGCATTG | + |
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Preference number: 2 (lower is better) Translates to: TGGGSGAEDQVLLVVRLRLSHHF*NPPQAL Trigger: CAATGCTTGAGGAGGATTTCAGAAGTGATGGCTGAG...TCTCAACCGGACCACTAGCAGTACCTGATCCTCGGCCCCACTCCCACCCCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTCCTCATAGCTCTCGCTTCCTTCACTGGAGCCTTTCAGCCCAGCCTGGGAGTGCTCATAACCACTaGACTCTCTGCAGCTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: GLPHSSRFLHWSLSAQPGSAHNH*TLCSFH Trigger: GTGAAAGCTGCAGAGAGTTCAGTGGTTATGAGCACT...CCCAGGCTGGGCTGAAAGGCTCCAGTGAAGGAAGCGAGAGCTATGAGGAAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTCCTCATAGCTCTCGCTTCCTTCACTGGAGCCTTTCAGCCCAGCCTGGGGCTGAGAATTTACCTTaGGTGCTCATAACCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: GLPHSSRFLHWSLSAQPGAENLP*VLITTE Trigger: TTCAGTGGTTATGAGCACTCAAGGTAAATTCTCAGC...CCCAGGCTGGGCTGAAAGGCTCCAGTGAAGGAAGCGAGAGCTATGAGGAAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR CAA 90 bp | AATCACTGCCTATTGGCCCTTTTTACGAGTCCCTCCTCCCACCTTTaGAGGCAGTCTATGCTGCTAGACCTAGACCAGCCTGAAACTTGT | + |
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Preference number: 2 (lower is better) Translates to: NHCLLALFTSPSSHL*RQSMLLDLDQPETC Trigger: ACAAGTTTCAGGCTGGTCTAGGTCTAGCAGCATAGACTGCCTCAAAAGGTGGGAGGAGGGACTCGTAAAAAGGGCCAATAGGCAGTGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCAGTCTATGCTGCTAGACCTAGACCAGCCTGAAACTTGTAGCTCTCCTGCCGTAAGACCCAAATGCTaGCTGCTCAACTTTTACCTA | + |
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Preference number: 2 (lower is better) Translates to: RQSMLLDLDQPETCSSPAVRPKC*LLNFYL Trigger: TAGGTAAAAGTTGAGCAGGCAGCATTTGGGTCTTAC...GGCAGGAGAGCTACAAGTTTCAGGCTGGTCTAGGTCTAGCAGCATAGACTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGAACTTCAAAACAGCTGTaGTTGAACTTTAAGATTGTG | + |
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Preference number: 2 (lower is better) Translates to: IAPDTVSQCRAGSGLRVGTSKQL*LNFKIV Trigger: CACAATCTTAAAGTTCAAGCACAGCTGTTTTGAAGT...TCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTGGCTGGGAACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATCTCAGCCATCACTTCTaGAATCCTCCTCAAGCATTG | + |
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Preference number: 2 (lower is better) Translates to: SSGWEQKKAISTDTCMTNLSHHF*NPPQAL Trigger: CAATGCTTGAGGAGGATTTCAGAAGTGATGGCTGAG...ATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGTTCCCAGCCACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCCTATACAAGCCTATTGACAGAGTaGCCAAGCCTGTCCCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: KAISTDTCMTNAAGFSYTSLLTE*PSLSQY Trigger: ATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCT...TGTATAGGAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTATCCTACACATTTTATCAAATGCTTGTCAGTATAACTTCAAAACAGCTCCAGTCTCTCAGAACTaGGAACAGGTCCAAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PGILHILSNACQYNFKTAPVSQN*EQVQAH Trigger: GTGGGCTTGGACCTGTTCCCAGTTCTGAGAGACTGG...AGCTGTTTTGAAGTTATACTGACAAGCATTTGATAAAATGTGTAGGATACCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTATCCTACACATTTTATCAAATGCTTGTCAGTATAACTTCAAAACAGCTTTAATCACTGCCTATTaGCCCTTTTTACGAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: PGILHILSNACQYNFKTALITAY*PFLRVP Trigger: AGGGACTCGTAAAAAGGGCCAATAGGCAGTGATTAA...AGCTGTTTTGAAGTTATACTGACAAGCATTTGATAAAATGTGTAGGATACCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR GCA 72 bp | TCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTaGCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: SSSSIAPDTVSQ*RAGSGLRVGQH Trigger: GTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTAGGGGTCTTCCTCATAGCTCTCGCTTCCTTCACTGGAGCCTTTCAGCCCCCCTCCTCCCACCTTTaGAGGCAGTCTATGCTGCTA | + |
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Preference number: 3 (lower is better) Translates to: QVGVFLIALASFTGAFQPPSSHL*RQSMLL Trigger: TAGCAGCATAGACTGCCTCAAAAGGTGGGAGGAGGG...GGGCTGAAAGGCTCCAGTGAAGGAAGCGAGAGCTATGAGGAAGACCCCTACCTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR TCA 72 bp | GTGGTATACATCCTAGAATACCAGCACCCAGGCGGCTaGGGCACAAAGACCTTGAACTCTAGGCCAGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: VVYILEYQHPGG*GTKTLNSRPVW Trigger: CCACACTGGCCTAGAGTTCAAGGTCTTTGTGCCTCAGCCGCCTGGGTGCTGGTATTCTAGGATGTATACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR TCA 72 bp | CCCATTCAGGATGGTTGTGAGCCATCATGTGGCTGCTaGACTCAGGACCTCTGGAAGATCAGCCCCAGGTAT | + |
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Preference number: 3 (lower is better) Translates to: PIQDGCEPSCGC*TQDLWKISPRY Trigger: ATACCTGGGGCTGATCTTCCAGAGGTCCTGAGTTCAGCAGCCACATGATGGCTCACAACCATCCTGAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR TCA 72 bp | CCAAAAGAGGGCATTGGATCCCATTCAGGATGGTTGTaGGCCATCATGTGGCTGCTGAACTCAGGACCTCTG | + |
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Preference number: 3 (lower is better) Translates to: PKEGIGSHSGWL*AIMWLLNSGPL Trigger: CAGAGGTCCTGAGTTCAGCAGCCACATGATGGCTCACAACCATCCTGAATGGGATCCAATGCCCTCTTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR TCA 72 bp | GACCAGCCTGAAACTTGTAGCTCTCCTGCCCTCACTTaGGCACTAGGATTTAAGTGCGTGTCACCATGTCAG | + |
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Preference number: 3 (lower is better) Translates to: DQPETCSSPALT*ALGFKCVSPCQ Trigger: CTGACATGGTGACACGCACTTAAATCCTAGTGCTCAAGTGAGGGCAGGAGAGCTACAAGTTTCAGGCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR GCA 72 bp | GGCCCTGGACAGAACCTTACCTTCAACCATTATCAGTaGTCTGCTCAACCCCTCTTACTAGGATGCTACCCT | + |
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Preference number: 3 (lower is better) Translates to: GPGQNLTFNHYQ*SAQPLLLGCYP Trigger: AGGGTAGCATCCTAGTAAGAGGGGTTGAGCAGAGCACTGATAATGGTTGAAGGTAAGGTTCTGTCCAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR CCA 72 bp | ACACTGTCTGAAGAAGAGACATCCAAAAGAGGGCATTaGATCCCATTCAGGATGGTTGTGAGCCATCATGTG | + |
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Preference number: 3 (lower is better) Translates to: TLSEEETSKRGH*IPFRMVVSHHV Trigger: CACATGATGGCTCACAACCATCCTGAATGGGATCCAATGCCCTCTTTTGGATGTCTCTTCTTCAGACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGTGGCTGGGAACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATAGTACAAGAAGCCTATaGACAGAGTGCCCAAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: SSGWEQKKAISTDTCMTNSTRSL*TECPSL Trigger: CAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACT...ATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGTTCCCAGCCACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| 3UTR GCA 72 bp | TCCAACTTCAATAGTACAAGAAGCCTATTGACAGAGTaGCCAAGCCTGTCCCAGTATGAAATTCACAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: SNFNSTRSLLTE*PSLSQYEIHRA Trigger: GGCTCTGTGAATTTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATTGAAGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| 3UTR CCA 72 bp | ATTTATTACGAAGGCTCATACCCAGTCTCTCAGAACTaGGAACAGGTCCAAGCCCACAATGGTGGTATACAT | + |
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Preference number: 3 (lower is better) Translates to: IYYEGSYPVSQN*EQVQAHNGGIH Trigger: ATGTATACCACCATTGTGGGCTTGGACCTGTTCCCAGTTCTGAGAGACTGGGTATGAGCCTTCGTAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR TCA 72 bp | CCTTCCCTTTCGGTTAATTTTCCTCAACTACAATTATaGCCGCTCCCCAATGATTCATCAGAAAGCCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: PSLSVNFPQLQL*PLPNDSSESLQ Trigger: CTGCAGGCTTTCTGATGAATCATTGGGGAGCGGTCATAATTGTAGTTGAGGAAAATTAACCGAAAGGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR TCA 72 bp | AGTGGTCCGGTTGAGAATTACATAGCCAGGTATGAATaGAGCCGACAGGGTGAAAACAGAAAGTTAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: SGPVENYIARYE*SRQGENRKLES Trigger: GCTTTCTAACTTTCTGTTTTCACCCTGTCGGCTTCATTCATACCTGGCTATGTAATTCTCAACCGGACCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR GCA 72 bp | CATTATCAGTGCTCTGCTCAACCCCTCTTACTAGGATaGTACCCTTCAGGTATAACTGCCTTGAAAAACGAA | + |
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Preference number: 3 (lower is better) Translates to: HYQCSAQPLLLG*YPSGITALKNE Trigger: TTCGTTTTTCAAGGCAGTTATACCTGAAGGGTAGCATCCTAGTAAGAGGGGTTGAGCAGAGCACTGATAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR CCA 72 bp | ATACTTACACTTTCCTGTTTCCTCTCGATAAGGCCCTaGACAGAACCTTACCTTCAACCATTATCAGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: ILTLSCFLSIRP*TEPYLQPLSVL Trigger: GAGCACTGATAATGGTTGAAGGTAAGGTTCTGTCCAGGGCCTTATCGAGAGGAAACAGGAAAGTGTAAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR GCA 72 bp | ACACCACAAAAAGCCCACCCAGAAGTAAGACCCAAATaGTGCCTGCTCAACTTTTACCTAAATTCTGCTTAT | + |
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Preference number: 3 (lower is better) Translates to: TPQKAHPEVRPK*CLLNFYLNSAY Trigger: ATAAGCAGAATTTAGGTAAAAGTTGAGCAGGCAGCATTTGGGTCTTACTTCTGGGTGGGCTTTTTGTGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| 3UTR TCA 72 bp | GGGAACAGAAGAAAGCAATTTCCACAGACACATGTATaGCAAATGCAGCAGGCTTTTCCTATACATGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: GNRRKQFPQTHV*QMQQAFPIHEE Trigger: TTCTTCATGTATAGGAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| 3UTR TCA 72 bp | AGACTTATTTTATTTCATGTACATGAGCACACTGTCTaGAGAAGAGACATCCAAAAGAGGGCATTGGATCCC | + |
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Preference number: 3 (lower is better) Translates to: RLILFHVHEHTV*RRDIQKRALDP Trigger: GGGATCCAATGCCCTCTTTTGGATGTCTCTTCTTCAGACAGTGTGCTCATGTACATGAAATAAAATAAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
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| CDS-3UTR TCA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCGTCACCAGCTTGGGCTaGCTCCACAGCTTCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGVTSLG*LHSFSS Trigger: AGAGCTGAAGCTGTGGAGTCAGCCCAAGCTGGTGAC...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR TCA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCAAGCTGTCGCACGGTaGTTCTCCACGAGGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGQAVAR*FSTRTW Trigger: CCAAGTCCTCGTGGAGAATCACCGTGCGACAGCTTG...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR GCA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCCTGAGAGTCGGATCATaGTCTCAAGCTGTCGCACGG | + |
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Preference number: 4 (lower is better) Translates to: SQCRAGSGLRVGQHRSLALRVGS*SQAVAR Trigger: CCGTGCGACAGCTTGAGAGCATGATCCGACTCTCAG...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR CCA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCTCTGCACGTGCTCCTaGTGTGCTAAGCTTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGLCTCS*CAKLGD Trigger: GTCTCCAAGCTTAGCACACCAGGAGCACGTGCAGAG...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR CCA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCTCTAGGAACAGCTTCTaGCATTTCTCGGCCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: SQCRAGSGLRVGQHRSLASRNSF*HFSATS Trigger: CGAGGTGGCCGAGAAATGCCAGAAGCTGTTCCTAGA...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR CCA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCTGTCACCAGCTTaGGCTGACTCCACAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGHLSPA*ADSTAS Trigger: TGAAGCTGTGGAGTCAGCCCAAGCTGGTGACAGATG...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR TCA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCAGTCACCAGCTTGGGCTaGCTCCACAGCTTCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SRHCLSVPCRVRAKGRTAVTSLG*LHSFSS Trigger: AGAGCTGAAGCTGTGGAGTCAGCCCAAGCTGGTGAC...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR TCA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCGAAGACCAGCCTGTATaGCAGATCTCTGACACCAAG | + |
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Preference number: 4 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGEDQPV*QISDTK Trigger: CTTGGTGTCAGAGATCTGTCATACAGGCTGGTCTTC...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTTACCTAAGCTCAGGGTGAACTaGGTGAGTGCGCACCACCTG | + |
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Preference number: 4 (lower is better) Translates to: AGSGLRVGQHRSLAIKLPKLRVN*VSAHHL Trigger: CAGGTGGTGCGCACTCACCCAGTTCACCCTGAGCTT...AGGTAACTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR CCA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCCCTGTTGGCACACACTaGATTTCGGCAGATATTCGG | + |
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Preference number: 4 (lower is better) Translates to: SQCRAGSGLRVGQHRSLAPVGTH*ISADIR Trigger: CCGAATATCTGCCGAAATCCAGTGTGTGCCAACAGG...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR CCA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCAAACCTTGGGTTGGTTaGTGCAACATGGCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQCRAGSGLRVGQHRSLAKPWVG*CNMAGK Trigger: CTTGCCTGCCATGTTGCACCAACCAACCCAAGGTTT...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTTCCTCATAGCTCTCGCTTCCTTCACTGGAGCCTTTCAGCCCAGCCTGGGGCCTCAGGGAGGGCTTaGAAACAGTCTCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLPHSSRFLHWSLSAQPGASGRA*KQSPGW Trigger: CCAGCCAGGAGACTGTTTCCAAGCCCTCCCTGAGGC...CCCAGGCTGGGCTGAAAGGCTCCAGTGAAGGAAGCGAGAGCTATGAGGAAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCCTCTTGATCTAGATTaGCATCAGGCGTCTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGPLDLD*HQASLH Trigger: GTGTAGAGACGCCTGATGTCAATCTAGATCAAGAGG...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGCCTGTTGGCACACACTaGATTTCGGCAGATATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKPVGTH*ISADIR Trigger: CCGAATATCTGCCGAAATCCAGTGTGTGCCAACAGG...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCACGCTCCAGCCTCAATaGCAAATTCGTGAGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQCRAGSGLRVGQHRSLATLQPQ*QIREIL Trigger: AAGAATCTCACGAATTTGTCATTGAGGCTGGAGCGT...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCAGGCACAACAATCAGTaGCCCTGTGAAATCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGRHNNQ*PCEITS Trigger: AGATGTGATTTCACAGGGGCACTGATTGTTGTGCCT...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTCTCCATCACTACCCTaGAACTCTTCCAGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKSPSLP*NSSRKS Trigger: AGACTTCCTGGAAGAGTTCCAGGGTAGTGATGGAGA...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTTTCCCTCCAAACCTTaGGTTGGTTGGTGCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKFPSKP*VGWCNM Trigger: CATGTTGCACCAACCAACCCAAGGTTTGGAGGGAAA...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCTCCTTCACCGTCATTTaGTTCTTAATGCTCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGSFTVI*FLMLSA Trigger: CGCTGAGAGCATTAAGAACCAAATGACGGTGAAGGA...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | AAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGCCTCAGGGAGGGCTTaGAAACAGTCTCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSSSSIAPDTVSQCRAGSASGRA*KQSPGW Trigger: CCAGCCAGGAGACTGTTTCCAAGCCCTCCCTGAGGC...GGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCTGTATGACAGATCTCTaGCACCAAGGGCCCGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSSSSIAPDTVSQCRAGSCMTDL*HQGPGA Trigger: GGCTCCGGGCCCTTGGTGTCAGAGATCTGTCATACA...GGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGAGGCACAACAATCAGTaGCCCTGTGAAATCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKRHNNQ*PCEITS Trigger: AGATGTGATTTCACAGGGGCACTGATTGTTGTGCCT...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | GAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCAAGCTCAGGGTGAACTaGGTGAGTGCGCACCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: EILLKHCSRHCLSVPCRVKLRVN*VSAHHL Trigger: CAGGTGGTGCGCACTCACCCAGTTCACCCTGAGCTT...GACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCAAAACCTTGGGTTGGTTaGTGCAACATGGCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRHCLSVPCRVRAKGRTAKPWVG*CNMAGK Trigger: CTTGCCTGCCATGTTGCACCAACCAACCCAAGGTTT...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTTACCTTCTCCTTTCGGTCTTTaGCAAAGGTCTTCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGSGLRVGQHRSLAIKLPSPFGL*QRSSRL Trigger: GAGCCTTGAAGACCTTTGTCAAAGACCGAAAGGAGA...AGGTAACTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAATCAGTGCCCCTGTaGAATCACATCTGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: IAPDTVSQCRAGSGLRVGQSVPL*NHICHQ Trigger: CTGGTGACAGATGTGATTTCACAGGGGCACTGATTG...TCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCTCAATGACAAATTCGTaGGATTCTTCATCTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SQCRAGSGLRVGQHRSLASMTNS*DSSSLT Trigger: GGTGAGAGATGAAGAATCTCACGAATTTGTCATTGA...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCCGATTCTTCAATTCTTaGATGCAAGTCTACTATGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQCRAGSGLRVGQHRSLARFFNS*MQVYYA Trigger: CGCATAGTAGACTTGCATTCAAGAATTGAAGAATCG...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCGCGTCTCTACACGGATaGTTGATTTATTCAGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: SQCRAGSGLRVGQHRSLAASLHG*LIYSVI Trigger: GATTACTGAATAAATCAATCATCCGTGTAGAGACGC...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCTCAGCCCAGCCTGGGTaGGCTCAATCAGAACGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSSSSIAPDTVSQCRAGSSAQPG*AQSERD Trigger: ATCACGTTCTGATTGAGCTCACCCAGGCTGGGCTGA...GGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027601.11 |
||
| CDS-3UTR GCA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGAAATTGTTCCAGGTCTaGAAAACTCACAACCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKKLFQV*KTHNQR Trigger: ACGCTGGTTGTGAGTTTTGCAGACCTGGAACAATTT...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | GAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCCCGGAGCCCTCGAATaGCTTCTGTCTCATACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EILLKHCSRHCLSVPCRVPGALE*LLSHTH Trigger: ATGGGTATGAGACAGAAGGCATTCGAGGGCTCCGGG...GACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCTCTTCAATTCTTGAATaGAAGTCTACTATGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQCRAGSGLRVGQHRSLASSILE*KSTMRL Trigger: CAGGCGCATAGTAGACTTGCATTCAAGAATTGAAGA...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCATTTCCCTCCAAACCTTaGGTTGGTTGGTGCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: SRHCLSVPCRVRAKGRTAFPSKP*VGWCNM Trigger: CATGTTGCACCAACCAACCCAAGGTTTGGAGGGAAA...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGTGGAGGCTTTGCCACTaGTATAGACAGCTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NPPQALLQTLSLSAVQGPWRLCH*YRQLWD Trigger: GTCCCAGAGCTGTCTATACCAGTGGCAAAGCCTCCA...CGGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR CCA 90 bp | GAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCTCTCGCTTCCTTCACTaGAGCCTTTCAGCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EILLKHCSRHCLSVPCRVSRFLH*SLSAQP Trigger: AGGCTGGGCTGAAAGGCTCCAGTGAAGGAAGCGAGA...GACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027601.11 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCTACAGGTTTTTGTCCTaGCTCATTTCAAACACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQCRAGSGLRVGQHRSLAYRFLS*LISNTF Trigger: AAAGGTGTTTGAAATGAGTCAGGACAAAAACCTGTA...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTCAATGACAAATTCGTaGGATTCTTCATCTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKSMTNS*DSSSLT Trigger: GGTGAGAGATGAAGAATCTCACGAATTTGTCATTGA...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGCTGTTTCAAAGATTTTaGTCTGTCATAGTGTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKLFQRF*SVIVSA Trigger: AGCGGACACTATGACAGATCAAAATCTTTGAAACAG...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR CCA 90 bp | AATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGTTGGAAACAGTCTCCTaGCTGGCATCTTCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NPPQALLQTLSLSAVQGPLETVS*LASSLE Trigger: CTCCAGTGAAGATGCCAGCCAGGAGACTGTTTCCAA...CGGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTTACCTTCCTTAATCACTGTTTaGCAGTCAAGGCACAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSGLRVGQHRSLAIKLPSLITV*QSRHRK Trigger: TTTCCTGTGCCTTGACTGTCAAACAGTGATTAAGGA...AGGTAACTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTTCCTCATAGCTCTCGCTTCCTTCACTGGAGCCTTTCAGCCCAGCCTGGGTGGATCTCTTCCTCTTaGTCTAGATTGACATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLPHSSRFLHWSLSAQPGWISSS*SRLTSG Trigger: GCCTGATGTCAATCTAGATCAAGAGGAAGAGATCCA...CCCAGGCTGGGCTGAAAGGCTCCAGTGAAGGAAGCGAGAGCTATGAGGAAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTTACCTAAATTGTTCCAGGTCTaGAAAACTCACAACCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGLRVGQHRSLAIKLPKLFQV*KTHNQR Trigger: ACGCTGGTTGTGAGTTTTGCAGACCTGGAACAATTT...AGGTAACTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCTTGAGTCTCTTGAATaGGAACCTTTTGAAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGLESLE*EPFENQ Trigger: TTGATTTTCAAAAGGTTCGCATTCAAGAGACTCAAG...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCAGCTCTTAGCTGTACTTaGATCACCAACAATGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRHCLSVPCRVRAKGRTAALSCT*ITNNAN Trigger: GTTTGCATTGTTGGTGATCCAAGTACAGCTAAGAGC...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCAACGTGCTTGAGAAATTaGCTCTTAGCTGTACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRHCLSVPCRVRAKGRTATCLRN*LLAVLG Trigger: TCCAAGTACAGCTAAGAGCCAATTTCTCAAGCACGT...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| 3UTR CAA 72 bp | CTATTGGCCCTTTTTACGAGTCCCTCCTCCCACCTTTaGAGGCAGTCTATGCTGCTAGACCTAGACCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLALFTSPSSHL*RQSMLLDLDQP Trigger: AGGCTGGTCTAGGTCTAGCAGCATAGACTGCCTCAAAAGGTGGGAGGAGGGACTCGTAAAAAGGGCCAATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTAGGGGTCTTCCTCATAGCTCTCGCTTCCTTCACTGGAGCCTTTCAGCCCACGCTCCAGCCTCAATaGCAAATTCGTGAGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVGVFLIALASFTGAFQPTLQPQ*QIREIL Trigger: AAGAATCTCACGAATTTGTCATTGAGGCTGGAGCGT...GGGCTGAAAGGCTCCAGTGAAGGAAGCGAGAGCTATGAGGAAGACCCCTACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | ATTGGCCCTTTTTACGAGTCCCTCCTCCCACCTTTTGAGGCAGTCTATGCTGCTTGCTCCATAGCTTCGTaGATAGCAACTTGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IGPFYESLLPPFEAVYAACSIAS*IATWSR Trigger: GCGGGACCAAGTTGCTATTCACGAAGCTATGGAGCA...AGCAGCATAGACTGCCTCAAAAGGTGGGAGGAGGGACTCGTAAAAAGGGCCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACTGTTTCAAAGATTTTaGTCTGTCATAGTGTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRHCLSVPCRVRAKGRTALFQRF*SVIVSA Trigger: AGCGGACACTATGACAGATCAAAATCTTTGAAACAG...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AGCACACTGTCTGAAGAAGAGACATCCAAAAGAGGGCATTGGATCCCATTCAGGCAAGCTGTCGCACGGTaGTTCTCCACGAGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: STLSEEETSKRGHWIPFRQAVAR*FSTRTW Trigger: CCAAGTCCTCGTGGAGAATCACCGTGCGACAGCTTG...CCTGAATGGGATCCAATGCCCTCTTTTGGATGTCTCTTCTTCAGACAGTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGTGGATCTCTTCCTCTTaGTCTAGATTGACATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NPPQALLQTLSLSAVQGPWISSS*SRLTSG Trigger: GCCTGATGTCAATCTAGATCAAGAGGAAGAGATCCA...CGGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTTACCTGTGTATTTGAACTGCTaGTCTACGTCCTTAATCACT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGLRVGQHRSLAIKLPVYLNC*STSLIT Trigger: AGTGATTAAGGACGTAGAGCAGCAGTTCAAATACAC...AGGTAACTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | AATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGCGGAGACGTTTGTACTaGTCCACAATGAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NPPQALLQTLSLSAVQGPRRRLY*STMKSS Trigger: AGAAGACTTCATTGTGGAGCAGTACAAACGTCTCCG...CGGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | GAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCTCTCCATCACTACCCTaGAACTCTTCCAGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EILLKHCSRHCLSVPCRVSPSLP*NSSRKS Trigger: AGACTTCCTGGAAGAGTTCCAGGGTAGTGATGGAGA...GACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAGTCTATGCTGCTAGACCTAGACCAGCCTGAAACTTGTAGCTCTCCTGCCGGACATGATGGGCGCTaGCAGATTGATGTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQSMLLDLDQPETCSSPAGHDGR*QIDVLF Trigger: AAACAGAACATCAATCTGTCAGCGCCCATCATGTCC...GGCAGGAGAGCTACAAGTTTCAGGCTGGTCTAGGTCTAGCAGCATAGACTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTAGGGGTCTTCCTCATAGCTCTCGCTTCCTTCACTGGAGCCTTTCAGCCCGCTCTTAGCTGTACTTaGATCACCAACAATGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVGVFLIALASFTGAFQPALSCT*ITNNAN Trigger: GTTTGCATTGTTGGTGATCCAAGTACAGCTAAGAGC...GGGCTGAAAGGCTCCAGTGAAGGAAGCGAGAGCTATGAGGAAGACCCCTACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | CAACCATTATCAGTGCTCTGCTCAACCCCTCTTACTAGGATGCTACCCTTCAGGTGGAGGCTTTGCCACTaGTATAGACAGCTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLSVLCSTPLTRMLPFRWRLCH*YRQLWD Trigger: GTCCCAGAGCTGTCTATACCAGTGGCAAAGCCTCCA...CCTGAAGGGTAGCATCCTAGTAAGAGGGGTTGAGCAGAGCACTGATAATGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | ATTGGCCCTTTTTACGAGTCCCTCCTCCCACCTTTTGAGGCAGTCTATGCTGCTTCCATTTTCCTGAGGTaGAGCACGATGAGGTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IGPFYESLLPPFEAVYAASIFLR*STMRFE Trigger: CTCGAACCTCATCGTGCTCCACCTCAGGAAAATGGA...AGCAGCATAGACTGCCTCAAAAGGTGGGAGGAGGGACTCGTAAAAAGGGCCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | TTCAATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAATGTATGACAGATCTCTaGCACCAAGGGCCCGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FNSTRSLLTECPSLSQYECMTDL*HQGPGA Trigger: GGCTCCGGGCCCTTGGTGTCAGAGATCTGTCATACA...TTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAGCCATCACTTCTGAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTTGCTCCATAGCTTCGTaGATAGCAACTTGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQPSLLKSSSSIAPDTVSCSIAS*IATWSR Trigger: GCGGGACCAAGTTGCTATTCACGAAGCTATGGAGCA...AGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTCAGAAGTGATGGCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTAGGGGTCTTCCTCATAGCTCTCGCTTCCTTCACTGGAGCCTTTCAGCCCTTCAGAGTCTATCTCTaGTTCGATTTCCTTCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QVGVFLIALASFTGAFQPFRVYL*FDFLQV Trigger: TACCTGAAGGAAATCGAATCAGAGATAGACTCTGAA...GGGCTGAAAGGCTCCAGTGAAGGAAGCGAGAGCTATGAGGAAGACCCCTACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAGCCATCACTTCTGAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCGTCACAGCAGTGCATaGGGGCCATTGATTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQPSLLKSSSSIAPDTVSRHSSA*GPLILR Trigger: TCTCAGAATCAATGGCCCGCATGCACTGCTGTGACG...AGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTCAGAAGTGATGGCTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | AAACAGGAGCCTAGAATTCAGCACAGAGGCATGTCTGCCCAGCACATACAAACTTCTAGGAACAGCTTCTaGCATTTCTCGGCCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KQEPRIQHRGMSAQHIQTSRNSF*HFSATS Trigger: CGAGGTGGCCGAGAAATGCCAGAAGCTGTTCCTAGA...AGTTTGTATGTGCTGGGCAGACATGCCTCTGTGCTGAATTCTAGGCTCCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAGTCTATGCTGCTAGACCTAGACCAGCCTGAAACTTGTAGCTCTCCTGCCTCCTTAATCACTGTTTaGCAGTCAAGGCACAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQSMLLDLDQPETCSSPASLITV*QSRHRK Trigger: TTTCCTGTGCCTTGACTGTCAAACAGTGATTAAGGA...GGCAGGAGAGCTACAAGTTTCAGGCTGGTCTAGGTCTAGCAGCATAGACTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | CGCTTCCAAATGTCCGATACTTACACTTTCCTGTTTCCTCTCGATAAGGCCCTGCAATCAGTGCCCCTGTaGAATCACATCTGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RFQMSDTYTFLFPLDKALQSVPL*NHICHQ Trigger: CTGGTGACAGATGTGATTTCACAGGGGCACTGATTG...CAGGGCCTTATCGAGAGGAAACAGGAAAGTGTAAGTATCGGACATTTGGAAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAGCCATCACTTCTGAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTGAAGACCAGCCTGTATaGCAGATCTCTGACACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQPSLLKSSSSIAPDTVSEDQPV*QISDTK Trigger: CTTGGTGTCAGAGATCTGTCATACAGGCTGGTCTTC...AGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTCAGAAGTGATGGCTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTAGGGGTCTTCCTCATAGCTCTCGCTTCCTTCACTGGAGCCTTTCAGCCCTACAGGTTTTTGTCCTaGCTCATTTCAAACACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVGVFLIALASFTGAFQPYRFLS*LISNTF Trigger: AAAGGTGTTTGAAATGAGTCAGGACAAAAACCTGTA...GGGCTGAAAGGCTCCAGTGAAGGAAGCGAGAGCTATGAGGAAGACCCCTACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAGTCTATGCTGCTAGACCTAGACCAGCCTGAAACTTGTAGCTCTCCTGCCTGGGCGCTGACAGATTaGTGTTCTGTTTCAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RQSMLLDLDQPETCSSPAWALTD*CSVSKI Trigger: AATCTTTGAAACAGAACATCAATCTGTCAGCGCCCA...GGCAGGAGAGCTACAAGTTTCAGGCTGGTCTAGGTCTAGCAGCATAGACTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCTTCAGAGTCTATCTCTaGTTCGATTTCCTTCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EILLKHCSRHCLSVPCRVFRVYL*FDFLQV Trigger: TACCTGAAGGAAATCGAATCAGAGATAGACTCTGAA...GACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | AATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGAGCTCCTCTGCAAACTaGAAGTATTTAATTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPPQALLQTLSLSAVQGPSSSAN*KYLISP Trigger: TGGAGAAATTAAATACTTGCAGTTTGCAGAGGAGCT...CGGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | AAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCTGTGTGTATTTGAACTaGTGCTCTACGTCCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KSSSSIAPDTVSQCRAGSCVYLN*CSTSLI Trigger: GATTAAGGACGTAGAGCAGCAGTTCAAATACACACA...GGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | TTCAATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAACTCTGCACGTGCTCCTaGTGTGCTAAGCTTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FNSTRSLLTECPSLSQYELCTCS*CAKLGD Trigger: GTCTCCAAGCTTAGCACACCAGGAGCACGTGCAGAG...TTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | GAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCAGCTCCTCTGCAAACTaGAAGTATTTAATTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EILLKHCSRHCLSVPCRVSSSAN*KYLISP Trigger: TGGAGAAATTAAATACTTGCAGTTTGCAGAGGAGCT...GACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | TTCAATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAACGTCACAGCAGTGCATaGGGGCCATTGATTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FNSTRSLLTECPSLSQYERHSSA*GPLILR Trigger: TCTCAGAATCAATGGCCCGCATGCACTGCTGTGACG...TTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCCCTTTCGGTTAATTTTCCTCAACTACAATTATGACCGCTCCCCAATGCATCTGTCACCAGCTTaGGCTGACTCCACAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLPFRLIFLNYNYDRSPMHLSPA*ADSTAS Trigger: TGAAGCTGTGGAGTCAGCCCAAGCTGGTGACAGATG...CATTGGGGAGCGGTCATAATTGTAGTTGAGGAAAATTAACCGAAAGGGAAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAAATTTGTCATAGTGTCCGCTaGCAGGGTTTGCTGCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NSTRSLLTECPSLSQYEICHSVR*QGLLQL Trigger: TAGCTGCAGCAAACCCTGTCAGCGGACACTATGACA...AATTTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAGCCATCACTTCTGAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTTGTACTGCTCCACAATaGAGTCTTCTGACTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQPSLLKSSSSIAPDTVSCTAPQ*SLLTLW Trigger: CCAAAGAGTCAGAAGACTTCATTGTGGAGCAGTACA...AGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTCAGAAGTGATGGCTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AGCACACTGTCTGAAGAAGAGACATCCAAAAGAGGGCATTGGATCCCATTCAGGTGTACTGCTCCACAATaGAGTCTTCTGACTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: STLSEEETSKRGHWIPFRCTAPQ*SLLTLW Trigger: CCAAAGAGTCAGAAGACTTCATTGTGGAGCAGTACA...CCTGAATGGGATCCAATGCCCTCTTTTGGATGTCTCTTCTTCAGACAGTGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCTGTCATAGTGTCCGCTaGCAGGGTTTGCTGCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TEESNFHRHMYDKCSRLFCHSVR*QGLLQL Trigger: TAGCTGCAGCAAACCCTGTCAGCGGACACTATGACA...GAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGGCTGGGAACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATTCCATTTTCCTGAGGTaGAGCACGATGAGGTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGWEQKKAISTDTCMTNSIFLR*STMRFE Trigger: CTCGAACCTCATCGTGCTCCACCTCAGGAAAATGGA...ATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGTTCCCAGCCACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCCCTTTCGGTTAATTTTCCTCAACTACAATTATGACCGCTCCCCAATGTCCTTCACCGTCATTTaGTTCTTAATGCTCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLPFRLIFLNYNYDRSPMSFTVI*FLMLSA Trigger: CGCTGAGAGCATTAAGAACCAAATGACGGTGAAGGA...CATTGGGGAGCGGTCATAATTGTAGTTGAGGAAAATTAACCGAAAGGGAAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | TTCAATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAATTGCTGCAGCTAAAATaGATGTCCTGGCATTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FNSTRSLLTECPSLSQYELLQLK*MSWHSE Trigger: CTCTGAATGCCAGGACATCCATTTTAGCTGCAGCAA...TTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCTTGGAAACAGTCTCCTaGCTGGCATCTTCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEESNFHRHMYDKCSRLFLETVS*LASSLE Trigger: CTCCAGTGAAGATGCCAGCCAGGAGACTGTTTCCAA...GAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCTCTCCTTTCGGTCTTTaGCAAAGGTCTTCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TEESNFHRHMYDKCSRLFSPFGL*QRSSRL Trigger: GAGCCTTGAAGACCTTTGTCAAAGACCGAAAGGAGA...GAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCCTATACATCGGCTGTGTGTATTTaGACTGCTGCTCTACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAISTDTCMTNAAGFSYTSAVCI*TAALRP Trigger: AGGACGTAGAGCAGCAGTTCAAATACACACAGCCGA...TGTATAGGAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCGGACATGATGGGCGCTaGCAGATTGATGTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TEESNFHRHMYDKCSRLFGHDGR*QIDVLF Trigger: AAACAGAACATCAATCTGTCAGCGCCCATCATGTCC...GAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | AATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAAATTCGGAGACGTTTGTACTaGTCCACAATGAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSTRSLLTECPSLSQYEIRRRLY*STMKSS Trigger: AGAAGACTTCATTGTGGAGCAGTACAAACGTCTCCG...AATTTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | AATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAAATTTTGCTGCAGCTAAAATaGATGTCCTGGCATTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSTRSLLTECPSLSQYEILLQLK*MSWHSE Trigger: CTCTGAATGCCAGGACATCCATTTTAGCTGCAGCAA...AATTTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGGCTGGGAACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATACGTGCTTGAGAAATTaGCTCTTAGCTGTACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSGWEQKKAISTDTCMTNTCLRN*LLAVLG Trigger: TCCAAGTACAGCTAAGAGCCAATTTCTCAAGCACGT...ATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGTTCCCAGCCACTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCTGGGCGCTGACAGATTaGTGTTCTGTTTCAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: TEESNFHRHMYDKCSRLFWALTD*CSVSKI Trigger: AATCTTTGAAACAGAACATCAATCTGTCAGCGCCCA...GAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CCA 90 bp | TTCAATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAAGTGGTAGAAAGTTGTTaGTTAAATTGTTCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNSTRSLLTECPSLSQYEVVESC*LNCSRS Trigger: AGACCTGGAACAATTTAACCAACAACTTTCTACCAC...TTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGTATCCTACACATTTTATCAAATGCTTGTCAGTATAACTTCAAAACAGCTCCTCTTGATCTAGATTaGCATCAGGCGTCTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: PGILHILSNACQYNFKTAPLDLD*HQASLH Trigger: GTGTAGAGACGCCTGATGTCAATCTAGATCAAGAGG...AGCTGTTTTGAAGTTATACTGACAAGCATTTGATAAAATGTGTAGGATACCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCCTATACAGCGTCTCTACACGGATaGTTGATTTATTCAGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KAISTDTCMTNAAGFSYTASLHG*LIYSVI Trigger: GATTACTGAATAAATCAATCATCCGTGTAGAGACGC...TGTATAGGAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCCTATACATGTGTGTATTTGAACTaGTGCTCTACGTCCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KAISTDTCMTNAAGFSYTCVYLN*CSTSLI Trigger: GATTAAGGACGTAGAGCAGCAGTTCAAATACACACA...TGTATAGGAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGTATCCTACACATTTTATCAAATGCTTGTCAGTATAACTTCAAAACAGCTCTTGAGTCTCTTGAATaGGAACCTTTTGAAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGILHILSNACQYNFKTALESLE*EPFENQ Trigger: TTGATTTTCAAAAGGTTCGCATTCAAGAGACTCAAG...AGCTGTTTTGAAGTTATACTGACAAGCATTTGATAAAATGTGTAGGATACCTGG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGAGCCTCAGGGAGGGCTaGGAAACAGTCTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKSLREG*ETVSWL Trigger: CAGCCAGGAGACTGTTTCCAAGCCCTCCCTGAGGCT...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCCCTGGTGTGCTAAGCTaGGAGACATCAGGCACAACA | + |
|
Preference number: 5 (lower is better) Translates to: SQCRAGSGLRVGQHRSLAPGVLS*ETSGTT Trigger: TGTTGTGCCTGATGTCTCCAAGCTTAGCACACCAGG...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCTTCGGCTGTGTGTATTaGAACTGCTGCTCTACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQCRAGSGLRVGQHRSLAFGCVY*NCCSTS Trigger: GGACGTAGAGCAGCAGTTCAAATACACACAGCCGAA...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTCCTGGCATTCAGAGTaGCCTTCACTCCTGCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKSWHSE*PSLLLS Trigger: CGAAAGCAGGAGTGAAGGCAACTCTGAATGCCAGGA...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 90 bp | CCATCACTACCCTGGAACTCTTCCAGGAAGTCTAGGAACAGCTTCTaGCATTTCTCGGCCACCTCGTCGCGCACCTCCGGGTGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSLPWNSSRKSRNSF*HFSATSSRTSGCWL Trigger: AAGCCAGCACCCGGAGGTGCGCGACGAGGTGGCCGAGAAATGCCAGAAGCTGTTCCTAGACTTCCTGGAAGAGTTCCAGGGTAGTGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACCTCCAAACCTTGGGTaGGTTGGTGCAACATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRHCLSVPCRVRAKGRTAPPNLG*VGATWQ Trigger: CTGCCATGTTGCACCAACCAACCCAAGGTTTGGAGG...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCACGTGCTTGAGAAATaGGCTCTTAGCTGTACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGHVLEK*ALSCTW Trigger: CCAAGTACAGCTAAGAGCCAATTTCTCAAGCACGTG...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 90 bp | TGGGTTGGTTGGTGCAACATGGCAGGCAAGGAAGACCAGCCTGTATaGCAGATCTCTGACACCAAGGGCCCGGAGCCCTCGAATGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WVGWCNMAGKEDQPV*QISDTKGPEPSNAF Trigger: GAAGGCATTCGAGGGCTCCGGGCCCTTGGTGTCAGAGATCTGTCATACAGGCTGGTCTTCCTTGCCTGCCATGTTGCACCAACCAACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 90 bp | TCACTGGAGCCGTTGAACCTATTCACAGGGGCAGGGCTGTCGGCATaGCCATTGACGCCTCCTTGTCCCTCATCCGTCTCCATCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SLEPLNLFTGAGLSA*PLTPPCPSSVSIWI Trigger: GATCCAGATGGAGACGGATGAGGGACAAGGAGGCGTCAATGGTCATGCCGACAGCCCTGCCCCTGTGAATAGGTTCAACGGCTCCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCTTCCTTCACCGTCATTaGGTTCTTAATGCTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGFLHRH*VLNALS Trigger: GCTGAGAGCATTAAGAACCAAATGACGGTGAAGGAA...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGAACTCGTCCACGTGCTaGAGAAATTGGCTCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKNSSTC*RNWLLA Trigger: AGCTAAGAGCCAATTTCTCAAGCACGTGGACGAGTT...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTTACCTTCCTGGCATTCAGAGTaGCCTTCACTCCTGCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: AGSGLRVGQHRSLAIKLPSWHSE*PSLLLS Trigger: CGAAAGCAGGAGTGAAGGCAACTCTGAATGCCAGGA...AGGTAACTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCGACTCTTTGGAAATCTaGGGTTTAAACTGTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGDSLEI*GLNCRA Trigger: TGCCCGACAGTTTAAACCCAAGATTTCCAAAGAGTC...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATCAAGTCCTTCAGGTACCAGTaGACAAGCTCGCTTCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CRAGSGLRVGQHRSLAIKSFRYQ*TSSLLF Trigger: AAAGAGAAGCGAGCTTGTCAACTGGTACCTGAAGGA...CTTGATGGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 90 bp | GTGCAACATGGCAGGCAAGGAAGACCAGCCTGTATGACAGATCTCTaGCACCAAGGGCCCGGAGCCCTCGAATGCCTTCTGTCTCATACC | + |
|
Preference number: 5 (lower is better) Translates to: VQHGRQGRPACMTDL*HQGPGALECLLSHT Trigger: GGTATGAGACAGAAGGCATTCGAGGGCTCCGGGCCCTTGGTGTCAGAGATCTGTCATACAGGCTGGTCTTCCTTGCCTGCCATGTTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCATTCGGCTGTGTGTATTaGAACTGCTGCTCTACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRHCLSVPCRVRAKGRTAFGCVY*NCCSTS Trigger: GGACGTAGAGCAGCAGTTCAAATACACACAGCCGAA...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGGGGTGGGAGTGGGGCCGAGGATCAGGTACTGCTAGTGGTCCGGTTGAGACACGTGCTTGAGAAATaGGCTCTTAGCTGTACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGGGSGAEDQVLLVVRLRHVLEK*ALSCTW Trigger: CCAAGTACAGCTAAGAGCCAATTTCTCAAGCACGTG...TCTCAACCGGACCACTAGCAGTACCTGATCCTCGGCCCCACTCCCACCCCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCCATGGGCGCTGACAGATaGATGTTCTGTTTCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SQCRAGSGLRVGQHRSLAMGADR*MFCFKD Trigger: ATCTTTGAAACAGAACATCAATCTGTCAGCGCCCAT...GGCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCCCGGGGAAGTTCCGCTaGAGTCTCTTGAATGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KSSSSIAPDTVSQCRAGSPGKFR*SLLNAN Trigger: GTTCGCATTCAAGAGACTCAAGCGGAACTTCCCCGG...GGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCATCCTTCAGGTACCAGTaGACAAGCTCGCTTCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SRHCLSVPCRVRAKGRTASFRYQ*TSSLLF Trigger: AAAGAGAAGCGAGCTTGTCAACTGGTACCTGAAGGA...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 90 bp | ACGGTGATTCTCCACGAGGACTTGGTGACCCCAGAGCCATCCCTCTaGCGGAGACGTTTGTACTGCTCCACAATGAAGTCTTCTGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: TVILHEDLVTPEPSL*RRRLYCSTMKSSDS Trigger: AGAGTCAGAAGACTTCATTGTGGAGCAGTACAAACGTCTCCGCCAGAGGGATGGCTCTGGGGTCACCAAGTCCTCGTGGAGAATCACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCACAGGTCCCTGGCAAGTTGTTGGTTAAATaGTTCCAGGTCTGCAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LSVPCRVRAKGRTAQVPGKLLVK*FQVCKT Trigger: AGTTTTGCAGACCTGGAACAATTTAACCAACAACTT...GCCAGGGACCTGTGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | ATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGATTCGTGAATAGCAACTaGGTCCCGCATGTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: IAPDTVSQCRAGSGLRVGFVNSN*VPHVHL Trigger: AAGATGGACATGCGGGACCAAGTTGCTATTCACGAA...TCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCAGACTCTTTGGAAATCTaGGGTTTAAACTGTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRHCLSVPCRVRAKGRTADSLEI*GLNCRA Trigger: TGCCCGACAGTTTAAACCCAAGATTTCCAAAGAGTC...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCTCTGGCGGAGACGTTaGTACTGCTCCACAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EILLKHCSRHCLSVPCRVLWRRR*YCSTMK Trigger: CTTCATTGTGGAGCAGTACAAACGTCTCCGCCAGAG...GACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS GCA 90 bp | CTCATACCCATCAGCTCCACTGACTCGGGAGTTAGTCTCTGCACGTaGTCCTGGTGTGCTAAGCTTGGAGACATCAGGCACAACAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIPISSTDSGVSLCT*SWCAKLGDIRHNNQ Trigger: CTGATTGTTGTGCCTGATGTCTCCAAGCTTAGCACACCAGGAGCACGTGCAGAGACTAACTCCCGAGTCAGTGGAGCTGATGGGTATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS-3UTR CAA 90 bp | ATTGGCCCTTTTTACGAGTCCCTCCTCCCACCTTTTGAGGCAGTCTATGCTGCTCCTCCAAACCTTGGGTaGGTTGGTGCAACATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IGPFYESLLPPFEAVYAAPPNLG*VGATWQ Trigger: CTGCCATGTTGCACCAACCAACCCAAGGTTTGGAGG...AGCAGCATAGACTGCCTCAAAAGGTGGGAGGAGGGACTCGTAAAAAGGGCCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTTCCTCATAGCTCTCGCTTCCTTCACTGGAGCCTTTCAGCCCAGCCTGGGTTCCTTCACCGTCATTaGGTTCTTAATGCTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLPHSSRFLHWSLSAQPGFLHRH*VLNALS Trigger: GCTGAGAGCATTAAGAACCAAATGACGGTGAAGGAA...CCCAGGCTGGGCTGAAAGGCTCCAGTGAAGGAAGCGAGAGCTATGAGGAAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCAATGGGCGCTGACAGATaGATGTTCTGTTTCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRHCLSVPCRVRAKGRTAMGADR*MFCFKD Trigger: ATCTTTGAAACAGAACATCAATCTGTCAGCGCCCAT...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 90 bp | CTCTTTAGTGCCGACTCGTCCTCCTCTTCTTCCATTTTCCTGAGGTaGAGCACGATGAGGTTCGAGATTCGGCAGTATTCAGCAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFSADSSSSSSIFLR*STMRFEIRQYSAKP Trigger: GGGCTTTGCTGAATACTGCCGAATCTCGAACCTCATCGTGCTCCACCTCAGGAAAATGGAAGAAGAGGAGGACGAGTCGGCACTAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 90 bp | CCATTATCAGCCAGCATCAACGCTCCAGCCTCAATGACAAATTCGTaGGATTCTTCATCTCTCACCACAGCTGCTGTTAAGCCGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PLSASINAPASMTNS*DSSSLTTAAVKPAA Trigger: CGCTGCCGGCTTAACAGCAGCTGTGGTGAGAGATGAAGAATCTCACGAATTTGTCATTGAGGCTGGAGCGTTGATGCTGGCTGATAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 90 bp | GGCACAACAATCAGTGCCCCTGTGAAATCACATCTGTCACCAGCTTaGGCTGACTCCACAGCTTCAGCTCTCAGGATAACCTCTAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: GTTISAPVKSHLSPA*ADSTASALRITSKL Trigger: GAGTTTAGAGGTTATCCTGAGAGCTGAAGCTGTGGAGTCAGCCCAAGCTGGTGACAGATGTGATTTCACAGGGGCACTGATTGTTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 90 bp | TCTCTGAGTTCTTTCCCTCCAAACCTTGGGTTGGTTGGTGCAACATaGCAGGCAAGGAAGACCAGCCTGTATGACAGATCTCTGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSSFPPNLGLVGAT*QARKTSLYDRSLTP Trigger: TGGTGTCAGAGATCTGTCATACAGGCTGGTCTTCCTTGCCTGCCATGTTGCACCAACCAACCCAAGGTTTGGAGGGAAAGAACTCAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGACAGCAAATGGTGGTAGAAAGTaGTTGGTTAAATTGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRHCLSVPCRVRAKGRTANGGRK*LVKLFQ Trigger: CTGGAACAATTTAACCAACAACTTTCTACCACCATT...TGCTGTCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGCCATCACTTCTGAAATCCTCCTCAAGCATTGCTCCAGACACTGTCTCTCCGGGGAAGTTCCGCTaGAGTCTCTTGAATGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TQPSLLKSSSSIAPDTVSPGKFR*SLLNAN Trigger: GTTCGCATTCAAGAGACTCAAGCGGAACTTCCCCGG...AGAGACAGTGTCTGGAGCAATGCTTGAGGAGGATTTCAGAAGTGATGGCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS GCA 90 bp | GACTTGGTGACCCCAGAGCCATCCCTCTGGCGGAGACGTTTGTACTaGTCCACAATGAAGTCTTCTGACTCTTTGGAAATCTTGGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: DLVTPEPSLWRRRLY*STMKSSDSLEILGL Trigger: TAAACCCAAGATTTCCAAAGAGTCAGAAGACTTCATTGTGGAGCAGTACAAACGTCTCCGCCAGAGGGATGGCTCTGGGGTCACCAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | ATTGCTCCAGACACTGTCTCTCAGTGCCGTGCAGGGTCCGGGCTAAGGGTAGGATCGATTCTTCAATTCTaGAATGCAAGTCTACTATGC | + |
|
Preference number: 5 (lower is better) Translates to: IAPDTVSQCRAGSGLRVGSILQF*NASLLC Trigger: GCATAGTAGACTTGCATTCAAGAATTGAAGAATCGA...TCCTACCCTTAGCCCGGACCCTGCACGGCACTGAGAGACAGTGTCTGGAGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | CGCTTCCAAATGTCCGATACTTACACTTTCCTGTTTCCTCTCGATAAGGCCCTGCTTTCCCTCCAAACCTaGGGTTGGTTGGTGCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: RFQMSDTYTFLFPLDKALLSLQT*GWLVQH Trigger: ATGTTGCACCAACCAACCCAAGGTTTGGAGGGAAAG...CAGGGCCTTATCGAGAGGAAACAGGAAAGTGTAAGTATCGGACATTTGGAAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCAGCCTCAGGGAGGGCTaGGAAACAGTCTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TEESNFHRHMYDKCSRLFSLREG*ETVSWL Trigger: CAGCCAGGAGACTGTTTCCAAGCCCTCCCTGAGGCT...GAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 90 bp | ACGCCTCCTTGTCCCTCATCCGTCTCCATCTGGATCTCTTCCTCTTaGTCTAGATTGACATCAGGCGTCTCTACACGGATGATTGATTTA | + |
|
Preference number: 5 (lower is better) Translates to: TPPCPSSVSIWISSS*SRLTSGVSTRMIDL Trigger: TAAATCAATCATCCGTGTAGAGACGCCTGATGTCAATCTAGATCAAGAGGAAGAGATCCAGATGGAGACGGATGAGGGACAAGGAGGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | ATTGGCCCTTTTTACGAGTCCCTCCTCCCACCTTTTGAGGCAGTCTATGCTGCTGGTGGTAGAAAGTTGTaGGTTAAATTGTTCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IGPFYESLLPPFEAVYAAGGRKL*VKLFQV Trigger: GACCTGGAACAATTTAACCAACAACTTTCTACCACC...AGCAGCATAGACTGCCTCAAAAGGTGGGAGGAGGGACTCGTAAAAAGGGCCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TTCAATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAACCTGGTGTGCTAAGCTaGGAGACATCAGGCACAACA | + |
|
Preference number: 5 (lower is better) Translates to: FNSTRSLLTECPSLSQYEPGVLS*ETSGTT Trigger: TGTTGTGCCTGATGTCTCCAAGCTTAGCACACCAGG...TTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | TTCAATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAACAAACCTTGGGTTGGTaGGTGCAACATGGCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FNSTRSLLTECPSLSQYEQTLGW*VQHGRQ Trigger: TTGCCTGCCATGTTGCACCAACCAACCCAAGGTTTG...TTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AAACAGGAGCCTAGAATTCAGCACAGAGGCATGTCTGCCCAGCACATACAAACTTTCGTGAATAGCAACTaGGTCCCGCATGTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KQEPRIQHRGMSAQHIQTFVNSN*VPHVHL Trigger: AAGATGGACATGCGGGACCAAGTTGCTATTCACGAA...AGTTTGTATGTGCTGGGCAGACATGCCTCTGTGCTGAATTCTAGGCTCCTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS TCA 90 bp | GTAGGGAAGAGGCTCGTGCAGAGATTGTGGTACAGGTTTTTGTCCTaGCTCATTTCAAACACCTTTTCCCATTCCTTCACCGTCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGKRLVQRLWYRFLS*LISNTFSHSFTVIW Trigger: CCAAATGACGGTGAAGGAATGGGAAAAGGTGTTTGAAATGAGTCAGGACAAAAACCTGTACCACAATCTCTGCACGAGCCTCTTCCCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 90 bp | CTTCTTCAGAGTCTATCTCTGATTCGATTTCCTTCAGGTACCAGTTaGCAAGCTCGCTTCTCTTTAGTGCCGACTCGTCCTCCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLQSLSLIRFPSGTS*QARFSLVPTRPPLL Trigger: AAGAAGAGGAGGACGAGTCGGCACTAAAGAGAAGCGAGCTTGTCAACTGGTACCTGAAGGAAATCGAATCAGAGATAGACTCTGAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AAACAGGAGCCTAGAATTCAGCACAGAGGCATGTCTGCCCAGCACATACAAACTGTCCTTAATCACTGTTaGACAGTCAAGGCACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KQEPRIQHRGMSAQHIQTVLNHC*TVKAQE Trigger: TTCCTGTGCCTTGACTGTCAAACAGTGATTAAGGAC...AGTTTGTATGTGCTGGGCAGACATGCCTCTGTGCTGAATTCTAGGCTCCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAAATTCAAACCTTGGGTTGGTaGGTGCAACATGGCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NSTRSLLTECPSLSQYEIQTLGW*VQHGRQ Trigger: TTGCCTGCCATGTTGCACCAACCAACCCAAGGTTTG...AATTTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAAATTCTCTGGCGGAGACGTTaGTACTGCTCCACAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSTRSLLTECPSLSQYEILWRRR*YCSTMK Trigger: CTTCATTGTGGAGCAGTACAAACGTCTCCGCCAGAG...AATTTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 90 bp | TACAACAGACACCATTATCAGCCAGCATCAACGCTCCAGCCTCAATaGCAAATTCGTGAGATTCTTCATCTCTCACCACAGCTGCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: YNRHHYQPASTLQPQ*QIREILHLSPQLLL Trigger: TAACAGCAGCTGTGGTGAGAGATGAAGAATCTCACGAATTTGTCATTGAGGCTGGAGCGTTGATGCTGGCTGATAATGGTGTCTGTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 90 bp | AGCTCCTCTGCAAACTGCAAGTATTTAATTTCTCCATCACTACCCTaGAACTCTTCCAGGAAGTCTAGGAACAGCTTCTGGCATTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSSANCKYLISPSLP*NSSRKSRNSFWHFS Trigger: CGAGAAATGCCAGAAGCTGTTCCTAGACTTCCTGGAAGAGTTCCAGGGTAGTGATGGAGAAATTAAATACTTGCAGTTTGCAGAGGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGGCTGGGAACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATGTGAGCTCACGAATCTaGTGTCTAGTAGGTAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSGWEQKKAISTDTCMTNVSSRI*CLVGRS Trigger: AGACCTACCTACTAGACACAAGATTCGTGAGCTCAC...ATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGTTCCCAGCCACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AATAGTACAAGAAGCCTATTGACAGAGTGCCCAAGCCTGTCCCAGTATGAAATTAACTCGTCCACGTGCTaGAGAAATTGGCTCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSTRSLLTECPSLSQYEINSSTC*RNWLLA Trigger: AGCTAAGAGCCAATTTCTCAAGCACGTGGACGAGTT...AATTTCATACTGGGACAGGCTTGGGCACTCTGTCAATAGGCTTCTTGTACTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGGCTGGGAACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATGTCCTTAATCACTGTTaGACAGTCAAGGCACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSGWEQKKAISTDTCMTNVLNHC*TVKAQE Trigger: TTCCTGTGCCTTGACTGTCAAACAGTGATTAAGGAC...ATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGTTCCCAGCCACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCCTATACACTTTCCCTCCAAACCTaGGGTTGGTTGGTGCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: KAISTDTCMTNAAGFSYTLSLQT*GWLVQH Trigger: ATGTTGCACCAACCAACCCAAGGTTTGGAGGGAAAG...TGTATAGGAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | GTCCTTCCCTTTCGGTTAATTTTCCTCAACTACAATTATGACCGCTCCCCAATGAAGTCTTCTGACTCTTaGGAAATCTTGGGTTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLPFRLIFLNYNYDRSPMKSSDS*EILGLN Trigger: GTTTAAACCCAAGATTTCCAAAGAGTCAGAAGACTT...CATTGGGGAGCGGTCATAATTGTAGTTGAGGAAAATTAACCGAAAGGGAAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCCTATACAGGTGGTAGAAAGTTGTaGGTTAAATTGTTCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KAISTDTCMTNAAGFSYTGGRKL*VKLFQV Trigger: GACCTGGAACAATTTAACCAACAACTTTCTACCACC...TGTATAGGAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGGCTGGGAACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATTCGATTCTTCAATTCTaGAATGCAAGTCTACTATGC | + |
|
Preference number: 5 (lower is better) Translates to: SSGWEQKKAISTDTCMTNSILQF*NASLLC Trigger: GCATAGTAGACTTGCATTCAAGAATTGAAGAATCGA...ATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGTTCCCAGCCACTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 90 bp | TATATCATCAAGGGAATAAACTCGATCGATCGATTCTTCAATTCTTaGATGCAAGTCTACTATGCGCCTGGCAATAGCATAATCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: YIIKGINSIDRFFNS*MQVYYAPGNSIICH Trigger: GTGACAGATTATGCTATTGCCAGGCGCATAGTAGACTTGCATTCAAGAATTGAAGAATCGATCGATCGAGTTTATTCCCTTGATGATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 90 bp | AATGATCGTCTTTTTATTTATGAGCTCTTCTTCAGAGTCTATCTCTaGTTCGATTTCCTTCAGGTACCAGTTGACAAGCTCGCTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NDRLFIYELFFRVYL*FDFLQVPVDKLASL Trigger: AAGAGAAGCGAGCTTGTCAACTGGTACCTGAAGGAAATCGAATCAGAGATAGACTCTGAAGAAGAGCTCATAAATAAAAAGACGATCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCAAGTTGTTGGTTAAATaGTTCCAGGTCTGCAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: TEESNFHRHMYDKCSRLFKLLVK*FQVCKT Trigger: AGTTTTGCAGACCTGGAACAATTTAACCAACAACTT...GAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGAAAGCAATTTCCACAGACACATGTATGACAAATGCAGCAGGCTTTTCAAGTCTTCTGACTCTTaGGAAATCTTGGGTTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TEESNFHRHMYDKCSRLFKSSDS*EILGLN Trigger: GTTTAAACCCAAGATTTCCAAAGAGTCAGAAGACTT...GAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGGAAATTGCTTTCTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS GCA 72 bp | TGGCATTTCTCGGCCACCTCGTCGCGCACCTCCGGGTaGTGGCTTCCGGCGCCGGGCTCCGCGGCCGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: WHFSATSSRTSG*WLPAPGSAAAA Trigger: CGCAGCGGCCGCGGAGCCCGGCGCCGGAAGCCAGCACCCGGAGGTGCGCGACGAGGTGGCCGAGAAATGCCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 72 bp | CATTTCTCGGCCACCTCGTCGCGCACCTCCGGGTGCTaGCTTCCGGCGCCGGGCTCCGCGGCCGCTGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HFSATSSRTSGC*LPAPGSAAAAR Trigger: CCTCGCAGCGGCCGCGGAGCCCGGCGCCGGAAGCCAGCACCCGGAGGTGCGCGACGAGGTGGCCGAGAAATG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 72 bp | CCCTGGAACTCTTCCAGGAAGTCTAGGAACAGCTTCTaGCATTTCTCGGCCACCTCGTCGCGCACCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PWNSSRKSRNSF*HFSATSSRTSG Trigger: CCCGGAGGTGCGCGACGAGGTGGCCGAGAAATGCCAGAAGCTGTTCCTAGACTTCCTGGAAGAGTTCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CAA 72 bp | CTCTCAAGCTGTCGCACGGTGATTCTCCACGAGGACTaGGTGACCCCAGAGCCATCCCTCTGGCGGAGACGT | + |
|
Preference number: 6 (lower is better) Translates to: LSSCRTVILHED*VTPEPSLWRRR Trigger: ACGTCTCCGCCAGAGGGATGGCTCTGGGGTCACCAAGTCCTCGTGGAGAATCACCGTGCGACAGCTTGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 72 bp | GGCAGGCAAGGAAGACCAGCCTGTATGACAGATCTCTaGCACCAAGGGCCCGGAGCCCTCGAATGCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRQGRPACMTDL*HQGPGALECLL Trigger: CAGAAGGCATTCGAGGGCTCCGGGCCCTTGGTGTCAGAGATCTGTCATACAGGCTGGTCTTCCTTGCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 72 bp | TGGTGCAACATGGCAGGCAAGGAAGACCAGCCTGTATaGCAGATCTCTGACACCAAGGGCCCGGAGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: WCNMAGKEDQPV*QISDTKGPEPS Trigger: CGAGGGCTCCGGGCCCTTGGTGTCAGAGATCTGTCATACAGGCTGGTCTTCCTTGCCTGCCATGTTGCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 72 bp | CCGTTGAACCTATTCACAGGGGCAGGGCTGTCGGCATaGCCATTGACGCCTCCTTGTCCCTCATCCGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLNLFTGAGLSA*PLTPPCPSSVS Trigger: GGAGACGGATGAGGGACAAGGAGGCGTCAATGGTCATGCCGACAGCCCTGCCCCTGTGAATAGGTTCAACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CAA 72 bp | AGGGGCAGGGCTGTCGGCATGACCATTGACGCCTCCTaGTCCCTCATCCGTCTCCATCTGGATCTCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RGRAVGMTIDAS*SLIRLHLDLFL Trigger: GAGGAAGAGATCCAGATGGAGACGGATGAGGGACAAGGAGGCGTCAATGGTCATGCCGACAGCCCTGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CAA 90 bp | CGGATCATGCTCTCAAGCTGTCGCACGGTGATTCTCCACGAGGACTaGGTGACCCCAGAGCCATCCCTCTGGCGGAGACGTTTGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RIMLSSCRTVILHED*VTPEPSLWRRRLYC Trigger: GCAGTACAAACGTCTCCGCCAGAGGGATGGCTCTGGGGTCACCAAGTCCTCGTGGAGAATCACCGTGCGACAGCTTGAGAGCATGATCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 72 bp | CATCTCTCACCACAGCTGCTGTTAAGCCGGCAGCGCTaGAGGCTTTGCCACTGGTATAGACAGCTCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: HLSPQLLLSRQR*RLCHWYRQLWD Trigger: GTCCCAGAGCTGTCTATACCAGTGGCAAAGCCTCCAGCGCTGCCGGCTTAACAGCAGCTGTGGTGAGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 72 bp | CTCCACGAGGACTTGGTGACCCCAGAGCCATCCCTCTaGCGGAGACGTTTGTACTGCTCCACAATGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LHEDLVTPEPSL*RRRLYCSTMKS Trigger: AGACTTCATTGTGGAGCAGTACAAACGTCTCCGCCAGAGGGATGGCTCTGGGGTCACCAAGTCCTCGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CAA 90 bp | TTCGAGATTCGGCAGTATTCAGCAAAGCCCAGCCTCAGGGAGGGCTaGGAAACAGTCTCCTGGCTGGCATCTTCACTGGAGCCGTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FEIRQYSAKPSLREG*ETVSWLASSLEPLN Trigger: GTTCAACGGCTCCAGTGAAGATGCCAGCCAGGAGACTGTTTCCAAGCCCTCCCTGAGGCTGGGCTTTGCTGAATACTGCCGAATCTCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS GCA 72 bp | ATCAGCTCCACTGACTCGGGAGTTAGTCTCTGCACGTaGTCCTGGTGTGCTAAGCTTGGAGACATCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ISSTDSGVSLCT*SWCAKLGDIRH Trigger: GTGCCTGATGTCTCCAAGCTTAGCACACCAGGAGCACGTGCAGAGACTAACTCCCGAGTCAGTGGAGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CAA 72 bp | GAGTTAGTCTCTGCACGTGCTCCTGGTGTGCTAAGCTaGGAGACATCAGGCACAACAATCAGTGCCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ELVSARAPGVLS*ETSGTTISAPV Trigger: CACAGGGGCACTGATTGTTGTGCCTGATGTCTCCAAGCTTAGCACACCAGGAGCACGTGCAGAGACTAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 72 bp | GCTTGGAGACATCAGGCACAACAATCAGTGCCCCTGTaGAATCACATCTGTCACCAGCTTGGGCTGACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AWRHQAQQSVPL*NHICHQLGLTP Trigger: TGGAGTCAGCCCAAGCTGGTGACAGATGTGATTTCACAGGGGCACTGATTGTTGTGCCTGATGTCTCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CAA 72 bp | TTGGTGACCCCAGAGCCATCCCTCTGGCGGAGACGTTaGTACTGCTCCACAATGAAGTCTTCTGACTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LVTPEPSLWRRR*YCSTMKSSDSL Trigger: CAAAGAGTCAGAAGACTTCATTGTGGAGCAGTACAAACGTCTCCGCCAGAGGGATGGCTCTGGGGTCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CAA 90 bp | CACGAGGACTTGGTGACCCCAGAGCCATCCCTCTGGCGGAGACGTTaGTACTGCTCCACAATGAAGTCTTCTGACTCTTTGGAAATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: HEDLVTPEPSLWRRR*YCSTMKSSDSLEIL Trigger: CAAGATTTCCAAAGAGTCAGAAGACTTCATTGTGGAGCAGTACAAACGTCTCCGCCAGAGGGATGGCTCTGGGGTCACCAAGTCCTCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS GCA 72 bp | TGTGCTAAGCTTGGAGACATCAGGCACAACAATCAGTaGCCCTGTGAAATCACATCTGTCACCAGCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CAKLGDIRHNNQ*PCEITSVTSLG Trigger: GCCCAAGCTGGTGACAGATGTGATTTCACAGGGGCACTGATTGTTGTGCCTGATGTCTCCAAGCTTAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS GCA 72 bp | ACCCCAGAGCCATCCCTCTGGCGGAGACGTTTGTACTaGTCCACAATGAAGTCTTCTGACTCTTTGGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: TPEPSLWRRRLY*STMKSSDSLEI Trigger: GATTTCCAAAGAGTCAGAAGACTTCATTGTGGAGCAGTACAAACGTCTCCGCCAGAGGGATGGCTCTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 72 bp | ATCTCTGAGTTCTTTCCCTCCAAACCTTGGGTTGGTTaGTGCAACATGGCAGGCAAGGAAGACCAGCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ISEFFPSKPWVG*CNMAGKEDQPV Trigger: TACAGGCTGGTCTTCCTTGCCTGCCATGTTGCACCAACCAACCCAAGGTTTGGAGGGAAAGAACTCAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CAA 90 bp | CGGCTGTGTGTATTTGAACTGCTGCTCTACGTCCTTAATCACTGTTaGACAGTCAAGGCACAGGAAAGTTCCACTCACAAGCTCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLCVFELLLYVLNHC*TVKAQESSTHKLRV Trigger: CACCCTGAGCTTGTGAGTGGAACTTTCCTGTGCCTTGACTGTCAAACAGTGATTAAGGACGTAGAGCAGCAGTTCAAATACACACAGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CAA 72 bp | GAGTCTATCTCTGATTCGATTTCCTTCAGGTACCAGTaGACAAGCTCGCTTCTCTTTAGTGCCGACTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ESISDSISFRYQ*TSSLLFSADSS Trigger: GGACGAGTCGGCACTAAAGAGAAGCGAGCTTGTCAACTGGTACCTGAAGGAAATCGAATCAGAGATAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CAA 90 bp | TCTTCTTCAGAGTCTATCTCTGATTCGATTTCCTTCAGGTACCAGTaGACAAGCTCGCTTCTCTTTAGTGCCGACTCGTCCTCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSESISDSISFRYQ*TSSLLFSADSSSSS Trigger: AGAAGAGGAGGACGAGTCGGCACTAAAGAGAAGCGAGCTTGTCAACTGGTACCTGAAGGAAATCGAATCAGAGATAGACTCTGAAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 72 bp | CACCATTATCAGCCAGCATCAACGCTCCAGCCTCAATaGCAAATTCGTGAGATTCTTCATCTCTCACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: HHYQPASTLQPQ*QIREILHLSPQ Trigger: CTGTGGTGAGAGATGAAGAATCTCACGAATTTGTCATTGAGGCTGGAGCGTTGATGCTGGCTGATAATGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 72 bp | AGTCTATCTCTGATTCGATTTCCTTCAGGTACCAGTTaGCAAGCTCGCTTCTCTTTAGTGCCGACTCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSLIRFPSGTS*QARFSLVPTRP Trigger: AGGACGAGTCGGCACTAAAGAGAAGCGAGCTTGTCAACTGGTACCTGAAGGAAATCGAATCAGAGATAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS GCA 72 bp | GGTGGTAGAAAGTTGTTGGTTAAATTGTTCCAGGTCTaGAAAACTCACAACCAGCGTGTTTCTCTCAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: GGRKLLVKLFQV*KTHNQRVSLRT Trigger: CGTCCTGAGAGAAACACGCTGGTTGTGAGTTTTGCAGACCTGGAACAATTTAACCAACAACTTTCTACCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 72 bp | TATTTGAACTGCTGCTCTACGTCCTTAATCACTGTTTaGCAGTCAAGGCACAGGAAAGTTCCACTCACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: YLNCCSTSLITV*QSRHRKVPLTS Trigger: GCTTGTGAGTGGAACTTTCCTGTGCCTTGACTGTCAAACAGTGATTAAGGACGTAGAGCAGCAGTTCAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS TCA 72 bp | TCTGTTTCAAAGATTTTGATCTGTCATAGTGTCCGCTaGCAGGGTTTGCTGCAGCTAAAATGGATGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVSKILICHSVR*QGLLQLKWMSW Trigger: CCAGGACATCCATTTTAGCTGCAGCAAACCCTGTCAGCGGACACTATGACAGATCAAAATCTTTGAAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
||
| CDS CCA 72 bp | GCAAACTGCAAGTATTTAATTTCTCCATCACTACCCTaGAACTCTTCCAGGAAGTCTAGGAACAGCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ANCKYLISPSLP*NSSRKSRNSFW Trigger: CCAGAAGCTGTTCCTAGACTTCCTGGAAGAGTTCCAGGGTAGTGATGGAGAAATTAAATACTTGCAGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS CAA 72 bp | GTATTTGAACTGCTGCTCTACGTCCTTAATCACTGTTaGACAGTCAAGGCACAGGAAAGTTCCACTCACAAG | + |
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Preference number: 6 (lower is better) Translates to: VFELLLYVLNHC*TVKAQESSTHK Trigger: CTTGTGAGTGGAACTTTCCTGTGCCTTGACTGTCAAACAGTGATTAAGGACGTAGAGCAGCAGTTCAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS CAA 72 bp | CTTGATTTATTAGTGTCTAGAAGGAACCTCTTCCTGTaGGCACACACTGGATTTCGGCAGATATTCGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LDLLVSRRNLFL*AHTGFRQIFGC Trigger: ACAGCCGAATATCTGCCGAAATCCAGTGTGTGCCAACAGGAAGAGGTTCCTTCTAGACACTAATAAATCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS CAA 90 bp | AGGGTAGACTCTATAGAACTCTTCCTGAATGGTGGTAGAAAGTTGTaGGTTAAATTGTTCCAGGTCTGCAAAACTCACAACCAGCGTGTT | + |
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Preference number: 6 (lower is better) Translates to: RVDSIELFLNGGRKL*VKLFQVCKTHNQRV Trigger: AACACGCTGGTTGTGAGTTTTGCAGACCTGGAACAATTTAACCAACAACTTTCTACCACCATTCAGGAAGAGTTCTATAGAGTCTACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS CAA 90 bp | GTAAGGGTAGACTCTATAGAACTCTTCCTGAATGGTGGTAGAAAGTaGTTGGTTAAATTGTTCCAGGTCTGCAAAACTCACAACCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: VRVDSIELFLNGGRK*LVKLFQVCKTHNQR Trigger: ACGCTGGTTGTGAGTTTTGCAGACCTGGAACAATTTAACCAACAACTTTCTACCACCATTCAGGAAGAGTTCTATAGAGTCTACCCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS CAA 90 bp | TCAACAAATCTTGATTTATTAGTGTCTAGAAGGAACCTCTTCCTGTaGGCACACACTGGATTTCGGCAGATATTCGGCTGTGTGTATTTG | + |
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Preference number: 6 (lower is better) Translates to: STNLDLLVSRRNLFL*AHTGFRQIFGCVYL Trigger: CAAATACACACAGCCGAATATCTGCCGAAATCCAGTGTGTGCCAACAGGAAGAGGTTCCTTCTAGACACTAATAAATCAAGATTTGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS TCA 72 bp | AAGGGAATAAACTCGATCGATCGATTCTTCAATTCTTaGATGCAAGTCTACTATGCGCCTGGCAATAGCATA | + |
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Preference number: 6 (lower is better) Translates to: KGINSIDRFFNS*MQVYYAPGNSI Trigger: TATGCTATTGCCAGGCGCATAGTAGACTTGCATTCAAGAATTGAAGAATCGATCGATCGAGTTTATTCCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS CAA 72 bp | GACTCTATAGAACTCTTCCTGAATGGTGGTAGAAAGTaGTTGGTTAAATTGTTCCAGGTCTGCAAAACTCAC | + |
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Preference number: 6 (lower is better) Translates to: DSIELFLNGGRK*LVKLFQVCKTH Trigger: GTGAGTTTTGCAGACCTGGAACAATTTAACCAACAACTTTCTACCACCATTCAGGAAGAGTTCTATAGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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| CDS TCA 72 bp | CTTTTTATTTATGAGCTCTTCTTCAGAGTCTATCTCTaGTTCGATTTCCTTCAGGTACCAGTTGACAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LFIYELFFRVYL*FDFLQVPVDKL Trigger: GAGCTTGTCAACTGGTACCTGAAGGAAATCGAATCAGAGATAGACTCTGAAGAAGAGCTCATAAATAAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027601.11 ENSMUST00000190495.2 |
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