Pregenerated sensors for MCM4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022673Ensembl transcript IDs: ENSMUST00000023353.4, ENSMUST00000229606.2, ENSMUST00000230437.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCCCTCTACATACAGCATaGATGGTACTCTTACCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SLAHHITVKDVRLPVIPSPLHTA*MVLLPS Trigger: GGAAGGTAAGAGTACCATGCATGCTGTATGTAGAGG...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGTATATAGTGGAATACTaGCTTTCAGACTCCTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: KGCTAASYTKHTMLHTVRYIVEY*LSDSFC Trigger: GCAAAAGGAGTCTGAAAGGCAGTATTCCACTATATA...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| 3UTR-3UTR GCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCCTTTCAGACTCCTTTTaGAGCAATAACAACAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SLAHHITVKDVRLPVIPSLSDSF*SNNNSE Trigger: CTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAG...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAGGTGCTATAAAAATCATTAGCCCATCATATCACAGTAAAGGATGTACGTACATACAGCATGCATaGTACTCTTACCTTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SPGAIKIISPSYHSKGCTYIQHA*YSYLPP Trigger: GGGAGGAAGGTAAGAGTACCATGCATGCTGTATGTA...CGTACATCCTTTACTGTGATATGATGGGCTAATGATTTTTATAGCACCTGGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| 3UTR-3UTR CAA 90 bp | AATGCTCCACACAGTAAGGACATAGCCTCTACATACAGCATGCATGGTACTCTTCCTTCCTCCCCAGCATaGCAACACAACAAAGGCACA | + |
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Preference number: 3 (lower is better) Translates to: NAPHSKDIASTYSMHGTLPSSPA*QHNKGT Trigger: TGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGG...AAGAGTACCATGCATGCTGTATGTAGAGGCTATGTCCTTACTGTGTGGAGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| 3UTR GCA 72 bp | ATTCCAGGAATAGAAGAGGTTTATATAGTGGAATACTaGCTTTCAGACTCCTTTTGCAGCAATAACAACAGT | + |
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Preference number: 3 (lower is better) Translates to: IPGIEEVYIVEY*LSDSFCSNNNS Trigger: ACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGTATTCCACTATATAAACCTCTTCTATTCCTGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCGGGACTGGGTTGGGGTaGCTCGTCCGCGTCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLAHHITVKDVRLPVIPSGTGLG*LVRVGC Trigger: GCAGCCGACGCGGACGAGTCACCCCAACCCAGTCCC...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGGGGTCAGTTGCAGACTaGTTCAGAGCCTCCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQGSVAD*FRASRW Trigger: CCACCGGGAGGCTCTGAAGCAGTCTGCAACTGACCC...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | ACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGAGGGCCATGCAGCGGCTCCTGGTGAGGTaGGCATTGGCAGTAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TPFAAITTVSDSSPRAMQRLLVR*ALAVAL Trigger: GAGAGCTACTGCCAATGCCCACCTCACCAGGAGCCG...CTGCATGGCCCTCGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGGGCATTCTGTGCAGGTaGGCTCTGCAGGTCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KGCTAASYTKHTMLHTVRGILCR*ALQVGS Trigger: GGAGCCGACCTGCAGAGCCCACCTGCACAGAATGCC...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | ACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGAGGGCCATGCAGTCCACCCGGGTGGTGTaGGCACAGACTTGGCATTGG | + |
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Preference number: 4 (lower is better) Translates to: TPFAAITTVSDSSPRAMQSTRVV*AQTWHW Trigger: CCAATGCCAAGTCTGTGCCCACACCACCCGGGTGGA...CTGCATGGCCCTCGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGACGAGGGCACCTGTCTaGAGGACAAGCTGCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQTRAPV*RTSCLV Trigger: GACCAGGCAGCTTGTCCTCCAGACAGGTGCCCTCGT...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | ATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCCAAACCCTTTCGTGCTaGGCCCAGATCTGGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: MHGTLTFLPSIATQQRHSQTLSC*AQIWPL Trigger: CAGAGGCCAGATCTGGGCTCAGCACGAAAGGGTTTG...GCTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | ATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCGAGTCTGCTGTTCCATaGCCTCATGCAGCACAGACC | + |
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Preference number: 4 (lower is better) Translates to: MHGTLTFLPSIATQQRHSESAVP*PHAAQT Trigger: GGTCTGTGCTGCATGAGGTCATGGAACAGCAGACTC...GCTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | ACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGAGGGCCATGCAGTTACATAAGCCTCAATaGGAGCCTGGCTGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TPFAAITTVSDSSPRAMQLHKPQ*EPGWPP Trigger: AGGAGGCCAGCCAGGCTCTCATTGAGGCTTATGTAA...CTGCATGGCCCTCGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | ACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGAGGGCCATGCAGAAACAAGGCATTCTGTaGAGGTGGGCTCTGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TPFAAITTVSDSSPRAMQKQGIL*RWALQV Trigger: GACCTGCAGAGCCCACCTGCACAGAATGCCTTGTTT...CTGCATGGCCCTCGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCTCGCGAGCTGGGAGTaGCATATGTCAATGGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQLASWE*HMSMVN Trigger: GTTCACCATTGACATATGGCACTCCCAGCTCGCGAG...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGTCTGCCTTACAGGTGTaGCTCTCACCCCACTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQSALQV*LSPHFL Trigger: CAAGAAGTGGGGTGAGAGGCACACCTGTAAGGCAGA...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGGCTGCGCCATCAGACTaGAGATCCACCTGCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: TAFQTPFAAITTVSDSSPAAPSD*RSTCKP Trigger: GGGTTTGCAGGTGGATCTGCAGTCTGATGGCGCAGC...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | ACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGAGGGCCATGCAGTCGGTTGTGGATCAGTaGCATGCTGTGGGTAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: TPFAAITTVSDSSPRAMQSVVDQ*HAVGSV Trigger: CACACTACCCACAGCATGGCACTGATCCACAACCGA...CTGCATGGCCCTCGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCGCTGGGACTTGCTGGTaGCAGGGTCCCCACACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLAHHITVKDVRLPVIPSAGTCW*QGPHTE Trigger: TTCTGTGTGGGGACCCTGGCACCAGCAAGTCCCAGC...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | AATGCTCCACACAGTAAGGACATAGCCTCTACATACAGCATGCATGGTACTCTTCTATCTCCACCCGGGTaGTGTGGGCACAGACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: NAPHSKDIASTYSMHGTLLSPPG*CGHRLG Trigger: GCCAAGTCTGTGCCCACACCACCCGGGTGGAGATAG...AAGAGTACCATGCATGCTGTATGTAGAGGCTATGTCCTTACTGTGTGGAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGACATACTGTAGCAGCTaGGACTTGCTGGTGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KGCTAASYTKHTMLHTVRTYCSS*DLLVPG Trigger: CCCTGGCACCAGCAAGTCCCAGCTGCTACAGTATGT...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | CAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCAACGTGTACTGGCCTCTaGGGACCAGGTTGTACACAT | + |
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Preference number: 4 (lower is better) Translates to: QHAWYSYLPPQHCNTTKATCTGL*GPGCTH Trigger: ATGTGTACAACCTGGTCCCCAGAGGCCAGTACACGT...TGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | CAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCAACTCTGTCCCCTGGTTaGACCTTGTCAACAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: QHAWYSYLPPQHCNTTKATLSPG*TLSTRS Trigger: TGACCTTGTTGACAAGGTTCAACCAGGGGACAGAGT...TGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGGCTGGGAGCCAAGGCTaGAGCAAGCCGCTCATAAAT | + |
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Preference number: 4 (lower is better) Translates to: TAFQTPFAAITTVSDSSPAGSQG*SKPLIN Trigger: ATTTATGAGCGGCTTGCTTCAGCCTTGGCTCCCAGC...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGGTGCGCGCATTGAGCTaGCAGATGATCCCAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TAFQTPFAAITTVSDSSPVRALS*QMIPAF Trigger: AAAGGCTGGGATCATCTGTCAGCTCAATGCGCGCAC...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | ATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCGCAATGGACAGAGTCTaGTGTTCCATGACCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: MHGTLTFLPSIATQQRHSAMDRV*CSMTSC Trigger: GCATGAGGTCATGGAACAGCAGACTCTGTCCATTGC...GCTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | AATGCTCCACACAGTAAGGACATAGCCTCTACATACAGCATGCATGGTACTCTTTCACTTCGAAGGGACTaGGTTGGGGTGACTCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: NAPHSKDIASTYSMHGTLSLRRD*VGVTRP Trigger: CGGACGAGTCACCCCAACCCAGTCCCTTCGAAGTGA...AAGAGTACCATGCATGCTGTATGTAGAGGCTATGTCCTTACTGTGTGGAGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | CAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCATCCCAGCCTTTGCAATaGACAGAGTCTGCTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QHAWYSYLPPQHCNTTKASQPLQ*TESAVP Trigger: TGGAACAGCAGACTCTGTCCATTGCAAAGGCTGGGA...TGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCGCCTCAATGAGAGCCTaGCTGGCCTCCTCACTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SLAHHITVKDVRLPVIPSASMRA*LASSLS Trigger: ACTGAGTGAGGAGGCCAGCCAGGCTCTCATTGAGGC...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCTTGTCAGAGAAGAATaGTCGGTTGTGGATCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQLVREE*SVVDQC Trigger: GCACTGATCCACAACCGATCATTCTTCTCTGACAAG...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | CAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCATTACCCCTCCCAGTGTaGCTGAAATCCTTCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QHAWYSYLPPQHCNTTKALPLPV*LKSFLV Trigger: AACAAGGAAGGATTTCAGTCACACTGGGAGGGGTAA...TGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | AATGCTCCACACAGTAAGGACATAGCCTCTACATACAGCATGCATGGTACTCTTGGCAGTGCACACAACTaGAGGGCTCAGCAATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: NAPHSKDIASTYSMHGTLGSAHN*RAQQFC Trigger: GCAGAATTGCTGAGCCCTGCAGTTGTGTGCACTGCC...AAGAGTACCATGCATGCTGTATGTAGAGGCTATGTCCTTACTGTGTGGAGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCAATAGGATTTGCTGCTaGCAGGACAGAGGTGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: SLAHHITVKDVRLPVIPSNRICC*QDRGAR Trigger: GCGCGCACCTCTGTCCTGGCAGCAGCAAATCCTATT...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGCTCAATAGGATTTGCTaGTGCCAGGACAGAGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: TAFQTPFAAITTVSDSSPLNRIC*CQDRGA Trigger: CGCACCTCTGTCCTGGCAGCAGCAAATCCTATTGAG...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGCCGGTGGAGGCGTTTTaGCTCTTCCACATCAATTGC | + |
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Preference number: 4 (lower is better) Translates to: TAFQTPFAAITTVSDSSPPVEAF*LFHINC Trigger: GCAATTGATGTGGAAGAGGCAAAACGCCTCCACCGG...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCTGATGGTGATGAGCTaGTCAATGTCTTCTGGATTC | + |
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Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQLMVMS*SMSSGF Trigger: GAATCCAGAAGACATTGATCAGCTCATCACCATCAG...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGTGGAAAAAGGCCTCCTaGATCTCCGGAATCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TAFQTPFAAITTVSDSSPWKKAS*ISGISC Trigger: ACAGCTGATTCCGGAGATGCAGGAGGCCTTTTTCCA...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | ACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGAGGGCCATGCAGGCCATGCAGACGTTTTaGATCCGTTTTCCGATAATG | + |
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Preference number: 4 (lower is better) Translates to: TPFAAITTVSDSSPRAMQAMQTF*IRFPIM Trigger: CATTATCGGAAAACGGATGCAAAACGTCTGCATGGC...CTGCATGGCCCTCGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCTTCATGTTCATAAATaGTGGGAGCCAAGGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQLHVHK*WEPRLK Trigger: CTTCAGCCTTGGCTCCCAGCATTTATGAACATGAAG...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGAGACTCAATAGGATTTaGTGCTGCCAGGACAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: KGCTAASYTKHTMLHTVRRLNRI*CCQDRG Trigger: ACCTCTGTCCTGGCAGCAGCAAATCCTATTGAGTCT...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGGCATCTGAGGAGGGCTaGAAAACAAGGCATTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TAFQTPFAAITTVSDSSPASEEG*KTRHSV Trigger: CACAGAATGCCTTGTTTTCCAGCCCTCCTCAGATGC...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | ATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCAGCCATGTCAAAGGTTaGTATAACCTCCTGTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: MHGTLTFLPSIATQQRHSSHVKG*YNLLWV Trigger: TACCCACAGGAGGTTATACCAACCTTTGACATGGCT...GCTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCGTGTGGGCACAGACTTaGCATTGGAAAAAGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SLAHHITVKDVRLPVIPSVWAQT*HWKKAS Trigger: GGAGGCCTTTTTCCAATGCCAAGTCTGTGCCCACAC...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | AATGCTCCACACAGTAAGGACATAGCCTCTACATACAGCATGCATGGTACTCTTATCAGTGCCATGCTGTaGGTAGTGTGGCAGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: NAPHSKDIASTYSMHGTLISAML*VVWQCT Trigger: TGTGCACTGCCACACTACCCACAGCATGGCACTGAT...AAGAGTACCATGCATGCTGTATGTAGAGGCTATGTCCTTACTGTGTGGAGCATT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCGGAGGACAAGCTGCCTaGTCTCAGGGTCTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLAHHITVKDVRLPVIPSGGQAA*SQGLSS Trigger: TGATGAAAGACCCTGAGACCAGGCAGCTTGTCCTCC...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | ATACAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCTAAAGAATGCATCTaGGGAGGGCTGGAAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: IQHAWYSYLPPQHCNTTKAKECI*GGLENK Trigger: CTTGTTTTCCAGCCCTCCTCAGATGCATTCTTTAGC...CTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCAAAGAAGATCTCATTaGCAGCCATGTCAAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQQRRSH*QPCQRL Trigger: CAACCTTTGACATGGCTGTCAATGAGATCTTCTTTG...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | ACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGAGGGCCATGCAGGTTCCACCAAAGAGCTaGAGTAAGATTCCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPFAAITTVSDSSPRAMQVPPKS*SKIPFL Trigger: CAAAAAGGGAATCTTACTTCAGCTCTTTGGTGGAAC...CTGCATGGCCCTCGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | AGTCCAGGTGCTATAAAAATCATTAGCCCATCATATCACAGTAAAGGATGTACGCCCAGATCTGGCCTCTaGCTTACAGGTGTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGAIKIISPSYHSKGCTPRSGL*LTGVPL Trigger: GAGAGGCACACCTGTAAGGCAGAGGCCAGATCTGGG...CGTACATCCTTTACTGTGATATGATGGGCTAATGATTTTTATAGCACCTGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGTCTTCATCAAGGCCATaGAGACGTTTTGCATCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGCTAASYTKHTMLHTVRSSSRP*RRFASV Trigger: AACGGATGCAAAACGTCTGCATGGCCTTGATGAAGA...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGTGTCAAACTCATCGATaGAGCATATCCCATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQCQTHR*SISHCH Trigger: GTGACAATGGGATATGCTGCATCGATGAGTTTGACA...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCGATGATCCCAGCCTTTaGAATGGACAGAGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLAHHITVKDVRLPVIPSDDPSL*NGQSLL Trigger: CAGCAGACTCTGTCCATTGCAAAGGCTGGGATCATC...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | ATACAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGTGGTATAACCTCCTGTaGGTAGGAGATGAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQHAWYSYLPPQHCNTTKWYNLL*VGDELS Trigger: AGACAGCTCATCTCCTACCCACAGGAGGTTATACCA...CTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGAAGAATGATCGGTTGTaGATCAGTGCCATGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAFQTPFAAITTVSDSSPKNDRL*ISAMLW Trigger: CCACAGCATGGCACTGATCCACAACCGATCATTCTT...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCCGCTCATAAATATCTaGCTTCCTGGAAAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQPLINI*LPGKFL Trigger: AAGGAACTTTCCAGGAAGCCAGATATTTATGAGCGG...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | ATACAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGCCTGTGGGTAGGAGATaGGCTGTCTATACAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQHAWYSYLPPQHCNTTKPVGRR*AVYTDF Trigger: AAAATCTGTATAGACAGCTCATCTCCTACCCACAGG...CTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | ATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCGAGACTCTTGAAGTTTaGTCATTTGCTTGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MHGTLTFLPSIATQQRHSETLEV*SFACQR Trigger: TCTCTGACAAGCAAATGATCAAACTTCAAGAGTCTC...GCTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCTCATATGCCTCATCCTaGGGGTCTAGCATGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLAHHITVKDVRLPVIPSSYASS*GSSMRK Trigger: TTTCCTCATGCTAGACCCTCAGGATGAGGCATATGA...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | AGTCCAGGTGCTATAAAAATCATTAGCCCATCATATCACAGTAAAGGATGTACGGTCTGGAGGACAAGCTaGCTGGTCTCAGGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGAIKIISPSYHSKGCTVWRTS*LVSGSF Trigger: GAAAGACCCTGAGACCAGGCAGCTTGTCCTCCAGAC...CGTACATCCTTTACTGTGATATGATGGGCTAATGATTTTTATAGCACCTGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | CAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCAGCAGCACAGACCTTGTaGTTTCATTCATTTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QHAWYSYLPPQHCNTTKAAAQTL*FHSFCQ Trigger: TTGACAAAATGAATGAAAGCACAAGGTCTGTGCTGC...TGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGGGTACTATGGGCATATaGAATGTAGTCTTTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGCTAASYTKHTMLHTVRGTMGI*NVVFQH Trigger: GTGCTGAAAGACTACATTGCATATGCCCATAGTACC...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | ATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCTCAACAAGGTCATTGTaGGCAAAAAGGACAATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MHGTLTFLPSIATQQRHSSTRSL*AKRTIV Trigger: CACTATTGTCCTTTTTGCCCACAATGACCTTGTTGA...GCTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGCATGTTCATAAATGCTaGGAGCCAAGGCTGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TAFQTPFAAITTVSDSSPHVHKC*EPRLKQ Trigger: TTGCTTCAGCCTTGGCTCCCAGCATTTATGAACATG...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGTCTTCAGGAGACTCTTaGAGTTTGATCATTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGCTAASYTKHTMLHTVRSSGDS*SLIICL Trigger: CAAGCAAATGATCAAACTTCAAGAGTCTCCTGAAGA...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | AGTCCAGGTGCTATAAAAATCATTAGCCCATCATATCACAGTAAAGGATGTACGCCCTCCCAGTGTGACTaGAATCCTTCCTTGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPGAIKIISPSYHSKGCTPSQCD*NPSLFH Trigger: GTGGAACAAGGAAGGATTTCAGTCACACTGGGAGGG...CGTACATCCTTTACTGTGATATGATGGGCTAATGATTTTTATAGCACCTGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | AGTCCAGGTGCTATAAAAATCATTAGCCCATCATATCACAGTAAAGGATGTACGGATGTCTTCTGCTGCTaGGCCATCAGACTGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SPGAIKIISPSYHSKGCTDVFCC*AIRLQI Trigger: GATCTGCAGTCTGATGGCGCAGCAGCAGAAGACATC...CGTACATCCTTTACTGTGATATGATGGGCTAATGATTTTTATAGCACCTGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | AGTCCAGGTGCTATAAAAATCATTAGCCCATCATATCACAGTAAAGGATGTACGAGTACGAGGGTCAGTTaGAGACTGCTTCAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGAIKIISPSYHSKGCTSTRVS*RLLQSL Trigger: GAGGCTCTGAAGCAGTCTGCAACTGACCCTCGTACT...CGTACATCCTTTACTGTGATATGATGGGCTAATGATTTTTATAGCACCTGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGAATCTTACTTTAGCATaGGCTTCTGCTAAGCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQNLTLA*ASAKRI Trigger: AATTCGCTTAGCAGAAGCCCATGCTAAAGTAAGATT...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGTTTTTAGGATTCCACTaGGACTCAATAGGATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGCTAASYTKHTMLHTVRFLGFH*DSIGFA Trigger: AGCAAATCCTATTGAGTCTCAGTGGAATCCTAAAAA...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | ATACAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGCAAATCACAAGCTTTTaGCCTAGAGACTGTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: IQHAWYSYLPPQHCNTTKQITSF*PRDCSL Trigger: AAGTGAACAGTCTCTAGGCCAAAAGCTTGTGATTTG...CTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | ATACAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGTCTGATGTTCTAAGATaGAGTCAGGATAACGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IQHAWYSYLPPQHCNTTKSDVLR*SQDNGQ Trigger: TTGACCGTTATCCTGACTCCATCTTAGAACATCAGA...CTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | AATGCTCCACACAGTAAGGACATAGCCTCTACATACAGCATGCATGGTACTCTTGCCATATGTCAATGGTaGACTAACATCAAAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NAPHSKDIASTYSMHGTLAICQW*TNIKVQ Trigger: TTGGACTTTGATGTTAGTTCACCATTGACATATGGC...AAGAGTACCATGCATGCTGTATGTAGAGGCTATGTCCTTACTGTGTGGAGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR TCA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGTGCATGTACAAAGGTTaGGTAATATCTATGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TAFQTPFAAITTVSDSSPCMYKG*VISMPT Trigger: TGTTGGCATAGATATTACTCAACCTTTGTACATGCA...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | AGTCCAGGTGCTATAAAAATCATTAGCCCATCATATCACAGTAAAGGATGTACGTGTTCCATGACCTCATaGAGCACAGACCTTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGAIKIISPSYHSKGCTCSMTS*STDLVL Trigger: AAGCACAAGGTCTGTGCTGCATGAGGTCATGGAACA...CGTACATCCTTTACTGTGATATGATGGGCTAATGATTTTTATAGCACCTGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | AGTCCAGGTGCTATAAAAATCATTAGCCCATCATATCACAGTAAAGGATGTACGGTTCACTCTGTCCCCTaGTTGAACCTTGTCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGAIKIISPSYHSKGCTVHSVP*LNLVNK Trigger: CTTGTTGACAAGGTTCAACCAGGGGACAGAGTGAAC...CGTACATCCTTTACTGTGATATGATGGGCTAATGATTTTTATAGCACCTGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR GCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCCTTGACAACAATGTGTaGGGTAGTTGGATATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLAHHITVKDVRLPVIPSLDNNV*GSWIFS Trigger: TGAAAATATCCAACTACCGCACACATTGTTGTCAAG...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CCA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCCTGATCAATGTCTTCTaGATTCAAGTTTCTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: SLAHHITVKDVRLPVIPSLINVF*IQVSHT Trigger: AGTATGAGAAACTTGAATCCAGAAGACATTGATCAG...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 90 bp | TGGGTGACGACCTGCTTTCCTCACTTCGAAGGGACTGGGTTGGGGTaGCTCGTCCGCGTCGGCTGCTGCGGCGGCTCGGGGTGGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WVTTCFPHFEGTGLG*LVRVGCCGGSGWMP Trigger: CGGCATCCACCCCGAGCCGCCGCAGCAGCCGACGCGGACGAGTCACCCCAACCCAGTCCCTTCGAAGTGAGGAAAGCAGGTCGTCACCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | CGTCTCCGATTGGGTGACGACCTGCTTTCCTCACTTCGAAGGGACTaGGTTGGGGTGACTCGTCCGCGTCGGCTGCTGCGGCGGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLRLGDDLLSSLRRD*VGVTRPRRLLRRLG Trigger: CCCGAGCCGCCGCAGCAGCCGACGCGGACGAGTCACCCCAACCCAGTCCCTTCGAAGTGAGGAAAGCAGGTCGTCACCCAATCGGAGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | GCAGGTCGGCTCCTGGTGAGGTGGGCATTGGCAGTAGCTCTCCGGTaGAAGAATCTTCGCCTCTACGTCTCCGATTGGGTGACGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGRLLVRWALAVALR*KNLRLYVSDWVTTC Trigger: GCAGGTCGTCACCCAATCGGAGACGTAGAGGCGAAGATTCTTCCACCGGAGAGCTACTGCCAATGCCCACCTCACCAGGAGCCGACCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 90 bp | TGCTGCGCCATCAGACTGCAGATCCACCTGCAAACCCTTTCGTGCTaGGCCCAGATCTGGCCTCTGCCTTACAGGTGTGCCTCTCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: CCAIRLQIHLQTLSC*AQIWPLPYRCASHP Trigger: GGGGTGAGAGGCACACCTGTAAGGCAGAGGCCAGATCTGGGCTCAGCACGAAAGGGTTTGCAGGTGGATCTGCAGTCTGATGGCGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | AGGCATTCTGTGCAGGTGGGCTCTGCAGGTCGGCTCCTGGTGAGGTaGGCATTGGCAGTAGCTCTCCGGTGGAAGAATCTTCGCCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: RHSVQVGSAGRLLVR*ALAVALRWKNLRLY Trigger: GTAGAGGCGAAGATTCTTCCACCGGAGAGCTACTGCCAATGCCCACCTCACCAGGAGCCGACCTGCAGAGCCCACCTGCACAGAATGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS GCA 90 bp | AGATCCACCTGCAAACCCTTTCGTGCTGAGCCCAGATCTGGCCTCTaGCTTACAGGTGTGCCTCTCACCCCACTTCTTGGGGTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSTCKPFRAEPRSGL*LTGVPLTPLLGVPS Trigger: GGAAGGAACCCCAAGAAGTGGGGTGAGAGGCACACCTGTAAGGCAGAGGCCAGATCTGGGCTCAGCACGAAAGGGTTTGCAGGTGGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | GCAGTAGCTCTCCGGTGGAAGAATCTTCGCCTCTACGTCTCCGATTaGGTGACGACCTGCTTTCCTCACTTCGAAGGGACTGGGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVALRWKNLRLYVSD*VTTCFPHFEGTGLG Trigger: CCCCAACCCAGTCCCTTCGAAGTGAGGAAAGCAGGTCGTCACCCAATCGGAGACGTAGAGGCGAAGATTCTTCCACCGGAGAGCTACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | CAGATCTGGCCTCTGCCTTACAGGTGTGCCTCTCACCCCACTTCTTaGGGTTCCTTCCACTCGCGAGCTGGGAGTGCCATATGTCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: QIWPLPYRCASHPTS*GSFHSRAGSAICQW Trigger: CCATTGACATATGGCACTCCCAGCTCGCGAGTGGAAGGAACCCCAAGAAGTGGGGTGAGAGGCACACCTGTAAGGCAGAGGCCAGATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | CAGGGCTCAGCAATTCTGCCTCGATCTATCTCCACCCGGGTGGTGTaGGCACAGACTTGGCATTGGAAAAAGGCCTCCTGCATCTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGSAILPRSISTRVV*AQTWHWKKASCISG Trigger: TCCGGAGATGCAGGAGGCCTTTTTCCAATGCCAAGTCTGTGCCCACACCACCCGGGTGGAGATAGATCGAGGCAGAATTGCTGAGCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS GCA 90 bp | GGTACGATGTCTTCTGCTGCTGCGCCATCAGACTGCAGATCCACCTaGAAACCCTTTCGTGCTGAGCCCAGATCTGGCCTCTGCCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: GTMSSAAAPSDCRST*KPFRAEPRSGLCLT Trigger: TGTAAGGCAGAGGCCAGATCTGGGCTCAGCACGAAAGGGTTTGCAGGTGGATCTGCAGTCTGATGGCGCAGCAGCAGAAGACATCGTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CCA 90 bp | GTGTACTGGCCTCTGGGGACCAGGTTGTACACATACTGTAGCAGCTaGGACTTGCTGGTGCCAGGGTCCCCACACAGAAGGATGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: VYWPLGTRLYTYCSS*DLLVPGSPHRRMLI Trigger: GATCAACATCCTTCTGTGTGGGGACCCTGGCACCAGCAAGTCCCAGCTGCTACAGTATGTGTACAACCTGGTCCCCAGAGGCCAGTACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS GCA 90 bp | GACTGTTCACTTGGTACGATGTCTTCTGCTGCTGCGCCATCAGACTaGAGATCCACCTGCAAACCCTTTCGTGCTGAGCCCAGATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DCSLGTMSSAAAPSD*RSTCKPFRAEPRSG Trigger: GCCAGATCTGGGCTCAGCACGAAAGGGTTTGCAGGTGGATCTGCAGTCTGATGGCGCAGCAGCAGAAGACATCGTACCAAGTGAACAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CCA 90 bp | CCTCGATCTATCTCCACCCGGGTGGTGTGGGCACAGACTTGGCATTaGAAAAAGGCCTCCTGCATCTCCGGAATCAGCTGTGATGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRSISTRVVWAQTWH*KKASCISGISCDVL Trigger: CAGAACATCACAGCTGATTCCGGAGATGCAGGAGGCCTTTTTCCAATGCCAAGTCTGTGCCCACACCACCCGGGTGGAGATAGATCGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CCA 90 bp | AACTGCAGGGCTCAGCAATTCTGCCTCGATCTATCTCCACCCGGGTaGTGTGGGCACAGACTTGGCATTGGAAAAAGGCCTCCTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: NCRAQQFCLDLSPPG*CGHRLGIGKRPPAS Trigger: AGATGCAGGAGGCCTTTTTCCAATGCCAAGTCTGTGCCCACACCACCCGGGTGGAGATAGATCGAGGCAGAATTGCTGAGCCCTGCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CCA 90 bp | ATTCTGCCTCGATCTATCTCCACCCGGGTGGTGTGGGCACAGACTTaGCATTGGAAAAAGGCCTCCTGCATCTCCGGAATCAGCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ILPRSISTRVVWAQT*HWKKASCISGISCD Trigger: ATCACAGCTGATTCCGGAGATGCAGGAGGCCTTTTTCCAATGCCAAGTCTGTGCCCACACCACCCGGGTGGAGATAGATCGAGGCAGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS GCA 90 bp | AATGATCGGTTGTGGATCAGTGCCATGCTGTGGGTAGTGTGGCAGTaGACACAACTGCAGGGCTCAGCAATTCTGCCTCGATCTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NDRLWISAMLWVVWQ*TQLQGSAILPRSIS Trigger: GGAGATAGATCGAGGCAGAATTGCTGAGCCCTGCAGTTGTGTGCACTGCCACACTACCCACAGCATGGCACTGATCCACAACCGATCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CCA 90 bp | GAGAAGAATGATCGGTTGTGGATCAGTGCCATGCTGTGGGTAGTGTaGCAGTGCACACAACTGCAGGGCTCAGCAATTCTGCCTCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: EKNDRLWISAMLWVV*QCTQLQGSAILPRS Trigger: AGATCGAGGCAGAATTGCTGAGCCCTGCAGTTGTGTGCACTGCCACACTACCCACAGCATGGCACTGATCCACAACCGATCATTCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
||
| CDS CCA 90 bp | TGCTTGTCAGAGAAGAATGATCGGTTGTGGATCAGTGCCATGCTGTaGGTAGTGTGGCAGTGCACACAACTGCAGGGCTCAGCAATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLSEKNDRLWISAML*VVWQCTQLQGSAIL Trigger: CAGAATTGCTGAGCCCTGCAGTTGTGTGCACTGCCACACTACCCACAGCATGGCACTGATCCACAACCGATCATTCTTCTCTGACAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS-3UTR CAA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGCCTCTACGTCTCCGATaGGGTGACGACCTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGCTAASYTKHTMLHTVRPLRLR*GDDLLS Trigger: GGAAAGCAGGTCGTCACCCAATCGGAGACGTAGAGG...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS-3UTR CAA 90 bp | CAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCAGGTGTGGGCACAGACTaGGCATTGGAAAAAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QHAWYSYLPPQHCNTTKAGVGTD*ALEKGL Trigger: GAGGCCTTTTTCCAATGCCAAGTCTGTGCCCACACC...TGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS-3UTR CAA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCTGTAGCAGCTGGGACTaGCTGGTGCCAGGGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLAHHITVKDVRLPVIPSCSSWD*LVPGSP Trigger: TGGGGACCCTGGCACCAGCAAGTCCCAGCTGCTACA...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS-3UTR CAA 90 bp | CATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCAGTACGAGGGTCAGTaGCAGACTGCTTCAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HAWYSYLPPQHCNTTKAQQYEGQ*QTASEP Trigger: AGGCTCTGAAGCAGTCTGCAACTGACCCTCGTACTG...CTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS GCA 90 bp | AGAATAGAAATATCCACAATGCCAGTACGAGGGTCAGTTGCAGACTaGTTCAGAGCCTCCCGGTGGAGGCGTTTTGCCTCTTCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: RIEISTMPVRGSVAD*FRASRWRRFASSTS Trigger: TGATGTGGAAGAGGCAAAACGCCTCCACCGGGAGGCTCTGAAGCAGTCTGCAACTGACCCTCGTACTGGCATTGTGGATATTTCTATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS GCA 90 bp | TGTAGTAAGAATAGAAATATCCACAATGCCAGTACGAGGGTCAGTTaGAGACTGCTTCAGAGCCTCCCGGTGGAGGCGTTTTGCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSKNRNIHNASTRVS*RLLQSLPVEAFCLF Trigger: GAAGAGGCAAAACGCCTCCACCGGGAGGCTCTGAAGCAGTCTGCAACTGACCCTCGTACTGGCATTGTGGATATTTCTATTCTTACTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGGGCACAGACTTGGCATaGGAAAAAGGCCTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KGCTAASYTKHTMLHTVRGTDLA*EKGLLH Trigger: ATGCAGGAGGCCTTTTTCCAATGCCAAGTCTGTGCC...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS TCA 90 bp | GACTTGGCATTGGAAAAAGGCCTCCTGCATCTCCGGAATCAGCTGTaGTGTTCTGATGACCATGCCACTGATGGTGATGAGCTGATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DLALEKGLLHLRNQL*CSDDHATDGDELIN Trigger: ATTGATCAGCTCATCACCATCAGTGGCATGGTCATCAGAACATCACAGCTGATTCCGGAGATGCAGGAGGCCTTTTTCCAATGCCAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
||
| CDS GCA 90 bp | GCAGCACAGACCTTGTGCTTTCATTCATTTTGTCAAACTCATCGATaGAGCATATCCCATTGTCACTCAGGACGAGGGCACCTGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AAQTLCFHSFCQTHR*SISHCHSGRGHLSG Trigger: TCCAGACAGGTGCCCTCGTCCTGAGTGACAATGGGATATGCTGCATCGATGAGTTTGACAAAATGAATGAAAGCACAAGGTCTGTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CAA 90 bp | AAAGGATGTACGGCTGCCAGTTATACCAAGCACACAATGCTCCACACAGTAAGGGAGAAGAATGATCGGTaGTGGATCAGTGCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGCTAASYTKHTMLHTVREKNDR*WISAML Trigger: CAGCATGGCACTGATCCACAACCGATCATTCTTCTC...CCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTACATCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CAA 90 bp | ACTGCCTTTCAGACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGCACTCTGTCCCCTGGTaGAACCTTGTCAACAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TAFQTPFAAITTVSDSSPHSVPW*NLVNKV Trigger: GACCTTGTTGACAAGGTTCAACCAGGGGACAGAGTG...CGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGTCTGAAAGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CAA 90 bp | CAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCAGGCCATGCAGACGTTTaGCATCCGTTTTCCGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: QHAWYSYLPPQHCNTTKAGHADV*HPFSDN Trigger: ATTATCGGAAAACGGATGCAAAACGTCTGCATGGCC...TGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 90 bp | GGTACTGCTCGATATATGCCTGTGACGTTCACTCTGTCCCCTGGTTaGACCTTGTCAACAAGGTCATTGTGGGCAAAAAGGACAATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTARYMPVTFTLSPG*TLSTRSLWAKRTIV Trigger: CACTATTGTCCTTTTTGCCCACAATGACCTTGTTGACAAGGTTCAACCAGGGGACAGAGTGAACGTCACAGGCATATATCGAGCAGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS GCA 90 bp | GACAGACTTCACGTTGCTCACTCTTGGATTAACTCGAATTGGTACTaGTCGATATATGCCTGTGACGTTCACTCTGTCCCCTGGTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DRLHVAHSWINSNWY*SIYACDVHSVPWLN Trigger: GTTCAACCAGGGGACAGAGTGAACGTCACAGGCATATATCGAGCAGTACCAATTCGAGTTAATCCAAGAGTGAGCAACGTGAAGTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CAA 90 bp | ATACAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGAACTCCTCCTCCACTaGCTCCTCACTTTGGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IQHAWYSYLPPQHCNTTKELLLH*LLTLVV Trigger: TACTACCAAAGTGAGGAGCAAGTGGAGGAGGAGTTC...CTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 90 bp | TTCAGGAGACTCTTGAAGTTTGATCATTTGCTTGTCAGAGAAGAATaGTCGGTTGTGGATCAGTGCCATGCTGTGGGTAGTGTGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FRRLLKFDHLLVREE*SVVDQCHAVGSVAV Trigger: CACTGCCACACTACCCACAGCATGGCACTGATCCACAACCGATCATTCTTCTCTGACAAGCAAATGATCAAACTTCAAGAGTCTCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CCA 90 bp | AATTGGTACTGCTCGATATATGCCTGTGACGTTCACTCTGTCCCCTaGTTGAACCTTGTCAACAAGGTCATTGTGGGCAAAAAGGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: NWYCSIYACDVHSVP*LNLVNKVIVGKKDN Trigger: ATTGTCCTTTTTGCCCACAATGACCTTGTTGACAAGGTTCAACCAGGGGACAGAGTGAACGTCACAGGCATATATCGAGCAGTACCAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | TTTATAGACAGACTTCACGTTGCTCACTCTTGGATTAACTCGAATTaGTACTGCTCGATATATGCCTGTGACGTTCACTCTGTCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FIDRLHVAHSWINSN*YCSIYACDVHSVPW Trigger: CCAGGGGACAGAGTGAACGTCACAGGCATATATCGAGCAGTACCAATTCGAGTTAATCCAAGAGTGAGCAACGTGAAGTCTGTCTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CAA 90 bp | AATGCTCCACACAGTAAGGACATAGCCTCTACATACAGCATGCATGGTACTCTTCTAGAGACTGTTCACTaGGTACGATGTCTTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NAPHSKDIASTYSMHGTLLETVH*VRCLLL Trigger: CAGCAGAAGACATCGTACCAAGTGAACAGTCTCTAG...AAGAGTACCATGCATGCTGTATGTAGAGGCTATGTCCTTACTGTGTGGAGCATT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CAA 90 bp | ACTCCTTTTGCAGCAATAACAACAGTGAGTGACTCTAGTCCGAGGGCCATGCAGGTCTTCAGGAGACTCTaGAAGTTTGATCATTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TPFAAITTVSDSSPRAMQVFRRL*KFDHLL Trigger: AAGCAAATGATCAAACTTCAAGAGTCTCCTGAAGAC...CTGCATGGCCCTCGGACTAGAGTCACTCACTGTTGTTATTGCTGCAAAAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CAA 90 bp | ATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGCACAGCTTGTCAACAAGGTCATaGTGGGCAAAAAGGACAATA | + |
|
Preference number: 5 (lower is better) Translates to: MHGTLTFLPSIATQQRHSLSTRS*WAKRTI Trigger: TATTGTCCTTTTTGCCCACAATGACCTTGTTGACAA...GCTGTGCCTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 90 bp | TCCCTTTTTGATATCTTCATGTTCATAAATGCTGGGAGCCAAGGCTaGAGCAAGCCGCTCATAAATATCTGGCTTCCTGGAAAGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLFDIFMFINAGSQG*SKPLINIWLPGKFL Trigger: AAGGAACTTTCCAGGAAGCCAGATATTTATGAGCGGCTTGCTTCAGCCTTGGCTCCCAGCATTTATGAACATGAAGATATCAAAAAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | AGGATAACGGTCAAAGAAGATCTCATTGACAGCCATGTCAAAGGTTaGTATAACCTCCTGTGGGTAGGAGATGAGCTGTCTATACAGATT | + |
|
Preference number: 5 (lower is better) Translates to: RITVKEDLIDSHVKG*YNLLWVGDELSIQI Trigger: AATCTGTATAGACAGCTCATCTCCTACCCACAGGAGGTTATACCAACCTTTGACATGGCTGTCAATGAGATCTTCTTTGACCGTTATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000229606.2 |
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| CDS-3UTR CAA 90 bp | ATACAGCATGCATGGTACTCTTACCTTCCTCCCCAGCATTGCAACACAACAAAGGTGCTTTCATTCATTTaGTCAAACTCATCGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IQHAWYSYLPPQHCNTTKVLSFI*SNSSMQ Trigger: CTGCATCGATGAGTTTGACAAAATGAATGAAAGCAC...CTTTGTTGTGTTGCAATGCTGGGGAGGAAGGTAAGAGTACCATGCATGCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | GACATCAATGTGGGTTTTATAGACAGACTTCACGTTGCTCACTCTTaGATTAACTCGAATTGGTACTGCTCGATATATGCCTGTGACGTT | + |
|
Preference number: 5 (lower is better) Translates to: DINVGFIDRLHVAHS*INSNWYCSIYACDV Trigger: AACGTCACAGGCATATATCGAGCAGTACCAATTCGAGTTAATCCAAGAGTGAGCAACGTGAAGTCTGTCTATAAAACCCACATTGATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | AGGATAACGGTCAAAGAAGATCTCATTGACAGCCATGTCAAAGGTTaGTATAACCTCCTCTCCAAGTTGTTGCATGTACAAAGGTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RITVKEDLIDSHVKG*YNLLSKLLHVQRLS Trigger: ACTCAACCTTTGTACATGCAACAACTTGGAGAGGAGGTTATACCAACCTTTGACATGGCTGTCAATGAGATCTTCTTTGACCGTTATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230437.2 |
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| CDS-3UTR CAA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCTCAAAGAAGATCTCATaGACAGCCATGTCAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLAHHITVKDVRLPVIPSSKKIS*TAMSKV Trigger: AACCTTTGACATGGCTGTCAATGAGATCTTCTTTGA...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CAA 90 bp | TCATTAGCCCATCATATCACAGTAAAGGATGTACGGCTGCCAGTTATACCAAGCAGTTTGATCATTTGCTaGTCAGAGAAGAATGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLAHHITVKDVRLPVIPSSLIIC*SEKNDR Trigger: CCGATCATTCTTCTCTGACAAGCAAATGATCAAACT...GCTTGGTATAACTGGCAGCCGTACATCCTTTACTGTGATATGATGGGCTAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 90 bp | TCTGATGACCATGCCACTGATGGTGATGAGCTGATCAATGTCTTCTaGATTCAAGTTTCTCATACTCTTTGTCTTCAACGCATTAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SDDHATDGDELINVF*IQVSHTLCLQRIKR Trigger: CCTTTTAATGCGTTGAAGACAAAGAGTATGAGAAACTTGAATCCAGAAGACATTGATCAGCTCATCACCATCAGTGGCATGGTCATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS-3UTR CAA 90 bp | AGTCCAGGTGCTATAAAAATCATTAGCCCATCATATCACAGTAAAGGATGTACGCATGCAGCACAGACCTaGTGCTTTCATTCATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPGAIKIISPSYHSKGCTHAAQT*CFHSFC Trigger: ACAAAATGAATGAAAGCACAAGGTCTGTGCTGCATG...CGTACATCCTTTACTGTGATATGATGGGCTAATGATTTTTATAGCACCTGGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS-3UTR CAA 90 bp | AGTCCAGGTGCTATAAAAATCATTAGCCCATCATATCACAGTAAAGGATGTACGTTGCATGTACAAAGGTaGAGTAATATCTATGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPGAIKIISPSYHSKGCTLHVQR*SNIYAN Trigger: GTTGGCATAGATATTACTCAACCTTTGTACATGCAA...CGTACATCCTTTACTGTGATATGATGGGCTAATGATTTTTATAGCACCTGGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 72 bp | ACCTGCTTTCCTCACTTCGAAGGGACTGGGTTGGGGTaGCTCGTCCGCGTCGGCTGCTGCGGCGGCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TCFPHFEGTGLG*LVRVGCCGGSG Trigger: CCCCGAGCCGCCGCAGCAGCCGACGCGGACGAGTCACCCCAACCCAGTCCCTTCGAAGTGAGGAAAGCAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CAA 72 bp | GTGGGCTCTGCAGGTCGGCTCCTGGTGAGGTGGGCATaGGCAGTAGCTCTCCGGTGGAAGAATCTTCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VGSAGRLLVRWA*AVALRWKNLRL Trigger: GAGGCGAAGATTCTTCCACCGGAGAGCTACTGCCAATGCCCACCTCACCAGGAGCCGACCTGCAGAGCCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CAA 90 bp | TCTGTGCAGGTGGGCTCTGCAGGTCGGCTCCTGGTGAGGTGGGCATaGGCAGTAGCTCTCCGGTGGAAGAATCTTCGCCTCTACGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVQVGSAGRLLVRWA*AVALRWKNLRLYVS Trigger: GGAGACGTAGAGGCGAAGATTCTTCCACCGGAGAGCTACTGCCAATGCCCACCTCACCAGGAGCCGACCTGCAGAGCCCACCTGCACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS GCA 72 bp | GGGCTGGAAAACAAGGCATTCTGTGCAGGTGGGCTCTaGAGGTCGGCTCCTGGTGAGGTGGGCATTGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GLENKAFCAGGL*RSAPGEVGIGS Trigger: ACTGCCAATGCCCACCTCACCAGGAGCCGACCTGCAGAGCCCACCTGCACAGAATGCCTTGTTTTCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS CCA 72 bp | GTGCAGGTGGGCTCTGCAGGTCGGCTCCTGGTGAGGTaGGCATTGGCAGTAGCTCTCCGGTGGAAGAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: VQVGSAGRLLVR*ALAVALRWKNL Trigger: AAGATTCTTCCACCGGAGAGCTACTGCCAATGCCCACCTCACCAGGAGCCGACCTGCAGAGCCCACCTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS GCA 72 bp | TGTGGCAGTGCACACAACTGCAGGGCTCAGCAATTCTaGCTCGATCTATCTCCACCCGGGTGGTGTGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CGSAHNCRAQQF*LDLSPPGWCGH Trigger: GTGCCCACACCACCCGGGTGGAGATAGATCGAGGCAGAATTGCTGAGCCCTGCAGTTGTGTGCACTGCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
||
| CDS CCA 72 bp | CCTCTGCCTTACAGGTGTGCCTCTCACCCCACTTCTTaGGGTTCCTTCCACTCGCGAGCTGGGAGTGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: PLPYRCASHPTS*GSFHSRAGSAI Trigger: TATGGCACTCCCAGCTCGCGAGTGGAAGGAACCCCAAGAAGTGGGGTGAGAGGCACACCTGTAAGGCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS CCA 72 bp | CCTCTGGGGACCAGGTTGTACACATACTGTAGCAGCTaGGACTTGCTGGTGCCAGGGTCCCCACACAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLGTRLYTYCSS*DLLVPGSPHRR Trigger: CCTTCTGTGTGGGGACCCTGGCACCAGCAAGTCCCAGCTGCTACAGTATGTGTACAACCTGGTCCCCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS CAA 90 bp | GCACTGGAGCCTTTTCCAGACGTGTACTGGCCTCTGGGGACCAGGTaGTACACATACTGTAGCAGCTGGGACTTGCTGGTGCCAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALEPFPDVYWPLGTR*YTYCSSWDLLVPGS Trigger: GGACCCTGGCACCAGCAAGTCCCAGCTGCTACAGTATGTGTACAACCTGGTCCCCAGAGGCCAGTACACGTCTGGAAAAGGCTCCAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS CAA 90 bp | GGCAGTAGCTCTCCGGTGGAAGAATCTTCGCCTCTACGTCTCCGATaGGGTGACGACCTGCTTTCCTCACTTCGAAGGGACTGGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSSPVEESSPLRLR*GDDLLSSLRRDWVG Trigger: CCCAACCCAGTCCCTTCGAAGTGAGGAAAGCAGGTCGTCACCCAATCGGAGACGTAGAGGCGAAGATTCTTCCACCGGAGAGCTACTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS GCA 72 bp | TCTTCTGCTGCTGCGCCATCAGACTGCAGATCCACCTaGAAACCCTTTCGTGCTGAGCCCAGATCTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSAAAPSDCRST*KPFRAEPRSGL Trigger: GAGGCCAGATCTGGGCTCAGCACGAAAGGGTTTGCAGGTGGATCTGCAGTCTGATGGCGCAGCAGCAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CCA 72 bp | CTCCTGGTGAGGTGGGCATTGGCAGTAGCTCTCCGGTaGAAGAATCTTCGCCTCTACGTCTCCGATTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLVRWALAVALR*KNLRLYVSDWV Trigger: CACCCAATCGGAGACGTAGAGGCGAAGATTCTTCCACCGGAGAGCTACTGCCAATGCCCACCTCACCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 72 bp | CCGCACTGGAGCCTTTTCCAGACGTGTACTGGCCTCTaGGGACCAGGTTGTACACATACTGTAGCAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PHWSLFQTCTGL*GPGCTHTVAAG Trigger: CCCAGCTGCTACAGTATGTGTACAACCTGGTCCCCAGAGGCCAGTACACGTCTGGAAAAGGCTCCAGTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 72 bp | ATCAGACTGCAGATCCACCTGCAAACCCTTTCGTGCTaGGCCCAGATCTGGCCTCTGCCTTACAGGTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: IRLQIHLQTLSC*AQIWPLPYRCA Trigger: GGCACACCTGTAAGGCAGAGGCCAGATCTGGGCTCAGCACGAAAGGGTTTGCAGGTGGATCTGCAGTCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS GCA 72 bp | CTTGGTACGATGTCTTCTGCTGCTGCGCCATCAGACTaGAGATCCACCTGCAAACCCTTTCGTGCTGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LGTMSSAAAPSD*RSTCKPFRAEP Trigger: GGGCTCAGCACGAAAGGGTTTGCAGGTGGATCTGCAGTCTGATGGCGCAGCAGCAGAAGACATCGTACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CCA 72 bp | CGATCTATCTCCACCCGGGTGGTGTGGGCACAGACTTaGCATTGGAAAAAGGCCTCCTGCATCTCCGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: RSISTRVVWAQT*HWKKASCISGI Trigger: GATTCCGGAGATGCAGGAGGCCTTTTTCCAATGCCAAGTCTGTGCCCACACCACCCGGGTGGAGATAGATCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CCA 72 bp | GCAATTCTGCCTCGATCTATCTCCACCCGGGTGGTGTaGGCACAGACTTGGCATTGGAAAAAGGCCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AILPRSISTRVV*AQTWHWKKASC Trigger: GCAGGAGGCCTTTTTCCAATGCCAAGTCTGTGCCCACACCACCCGGGTGGAGATAGATCGAGGCAGAATTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CAA 72 bp | GGGACCAGGTTGTACACATACTGTAGCAGCTGGGACTaGCTGGTGCCAGGGTCCCCACACAGAAGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GTRLYTYCSSWD*LVPGSPHRRML Trigger: CAACATCCTTCTGTGTGGGGACCCTGGCACCAGCAAGTCCCAGCTGCTACAGTATGTGTACAACCTGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 72 bp | GGTGGAAGAATCTTCGCCTCTACGTCTCCGATTGGGTaGCGACCTGCTTTCCTCACTTCGAAGGGACTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGRIFASTSPIG*RPAFLTSKGLG Trigger: ACCCAGTCCCTTCGAAGTGAGGAAAGCAGGTCGTCACCCAATCGGAGACGTAGAGGCGAAGATTCTTCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 72 bp | TTTGCTGCTGCCAGGACAGAGGTGCGCGCATTGAGCTaGCAGATGATCCCAGCCTTTGCAATGGACAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: FAAARTEVRALS*QMIPAFAMDRV Trigger: GACTCTGTCCATTGCAAAGGCTGGGATCATCTGTCAGCTCAATGCGCGCACCTCTGTCCTGGCAGCAGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS GCA 72 bp | TTGTGGATCAGTGCCATGCTGTGGGTAGTGTGGCAGTaGACACAACTGCAGGGCTCAGCAATTCTGCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: LWISAMLWVVWQ*TQLQGSAILPR Trigger: TCGAGGCAGAATTGCTGAGCCCTGCAGTTGTGTGCACTGCCACACTACCCACAGCATGGCACTGATCCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS GCA 72 bp | ATATCCACAATGCCAGTACGAGGGTCAGTTGCAGACTaGTTCAGAGCCTCCCGGTGGAGGCGTTTTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISTMPVRGSVAD*FRASRWRRFAS Trigger: AGAGGCAAAACGCCTCCACCGGGAGGCTCTGAAGCAGTCTGCAACTGACCCTCGTACTGGCATTGTGGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 72 bp | CTCCGGTGGAAGAATCTTCGCCTCTACGTCTCCGATTaGGTGACGACCTGCTTTCCTCACTTCGAAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: LRWKNLRLYVSD*VTTCFPHFEGT Trigger: AGTCCCTTCGAAGTGAGGAAAGCAGGTCGTCACCCAATCGGAGACGTAGAGGCGAAGATTCTTCCACCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 72 bp | GCTCAGCAATTCTGCCTCGATCTATCTCCACCCGGGTaGTGTGGGCACAGACTTGGCATTGGAAAAAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AQQFCLDLSPPG*CGHRLGIGKRP Trigger: AGGCCTTTTTCCAATGCCAAGTCTGTGCCCACACCACCCGGGTGGAGATAGATCGAGGCAGAATTGCTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
||
| CDS CCA 72 bp | GATCGGTTGTGGATCAGTGCCATGCTGTGGGTAGTGTaGCAGTGCACACAACTGCAGGGCTCAGCAATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DRLWISAMLWVV*QCTQLQGSAIL Trigger: CAGAATTGCTGAGCCCTGCAGTTGTGTGCACTGCCACACTACCCACAGCATGGCACTGATCCACAACCGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
||
| CDS CCA 72 bp | CATATCCCATTGTCACTCAGGACGAGGGCACCTGTCTaGAGGACAAGCTGCCTGGTCTCAGGGTCTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: HIPLSLRTRAPV*RTSCLVSGSFI Trigger: GATGAAAGACCCTGAGACCAGGCAGCTTGTCCTCCAGACAGGTGCCCTCGTCCTGAGTGACAATGGGATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS CAA 72 bp | TCTCCGGTGGAAGAATCTTCGCCTCTACGTCTCCGATaGGGTGACGACCTGCTTTCCTCACTTCGAAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SPVEESSPLRLR*GDDLLSSLRRD Trigger: GTCCCTTCGAAGTGAGGAAAGCAGGTCGTCACCCAATCGGAGACGTAGAGGCGAAGATTCTTCCACCGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CAA 72 bp | CCTTTTCCAGACGTGTACTGGCCTCTGGGGACCAGGTaGTACACATACTGTAGCAGCTGGGACTTGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PFPDVYWPLGTR*YTYCSSWDLLV Trigger: CACCAGCAAGTCCCAGCTGCTACAGTATGTGTACAACCTGGTCCCCAGAGGCCAGTACACGTCTGGAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS TCA 72 bp | ATCAGACTGCAGATCCACCTGCAAACCCTTTCGTGCTaGGCCCAGATCTGGCCTCTGCCTTACAGGTGTGNN | + |
|
Preference number: 6 (lower is better) Translates to: IRLQIHLQTLSC*AQIWPLPYRCX Trigger: NNCACACCTGTAAGGCAGAGGCCAGATCTGGGCTCAGCACGAAAGGGTTTGCAGGTGGATCTGCAGTCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230437.2 |
||
| CDS CCA 72 bp | GAGAAGAATGATCGGTTGTGGATCAGTGCCATGCTGTaGGTAGTGTGGCAGTGCACACAACTGCAGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: EKNDRLWISAML*VVWQCTQLQGS Trigger: TGAGCCCTGCAGTTGTGTGCACTGCCACACTACCCACAGCATGGCACTGATCCACAACCGATCATTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS GCA 72 bp | CTCACTCAGTCGGGGCATGATGGTACTATGGGCATATaGAATGTAGTCTTTCAGCACGGCCATGTCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LTQSGHDGTMGI*NVVFQHGHVQE Trigger: TTCCTGGACATGGCCGTGCTGAAAGACTACATTGCATATGCCCATAGTACCATCATGCCCCGACTGAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS GCA 72 bp | AATAGAAATATCCACAATGCCAGTACGAGGGTCAGTTaGAGACTGCTTCAGAGCCTCCCGGTGGAGGCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NRNIHNASTRVS*RLLQSLPVEAF Trigger: AAACGCCTCCACCGGGAGGCTCTGAAGCAGTCTGCAACTGACCCTCGTACTGGCATTGTGGATATTTCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CAA 90 bp | CATCTGTTCCCCAAATCACAAGCTTTTGGCCTAGAGACTGTTCACTaGGTACGATGTCTTCTGCTGCTGCGCCATCAGACTGCAGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: HLFPKSQAFGLETVH*VRCLLLLRHQTADP Trigger: TGGATCTGCAGTCTGATGGCGCAGCAGCAGAAGACATCGTACCAAGTGAACAGTCTCTAGGCCAAAAGCTTGTGATTTGGGGAACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS TCA 72 bp | TCAACAAGGTCATTGTGGGCAAAAAGGACAATAGTGTaGGGTGTCTGCCCAGCAGGCATGTCTTCAGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: STRSLWAKRTIV*GVCPAGMSSGD Trigger: GTCTCCTGAAGACATGCCTGCTGGGCAGACACCTCACACTATTGTCCTTTTTGCCCACAATGACCTTGTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS GCA 72 bp | TTTAGGATTCCACTGAGACTCAATAGGATTTGCTGCTaGCAGGACAGAGGTGCGCGCATTGAGCTGACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FRIPLRLNRICC*QDRGARIELTD Trigger: ATCTGTCAGCTCAATGCGCGCACCTCTGTCCTGGCAGCAGCAAATCCTATTGAGTCTCAGTGGAATCCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CAA 72 bp | CCCAAATCACAAGCTTTTGGCCTAGAGACTGTTCACTaGGTACGATGTCTTCTGCTGCTGCGCCATCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: PKSQAFGLETVH*VRCLLLLRHQT Trigger: AGTCTGATGGCGCAGCAGCAGAAGACATCGTACCAAGTGAACAGTCTCTAGGCCAAAAGCTTGTGATTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS TCA 72 bp | CGATATATGCCTGTGACGTTCACTCTGTCCCCTGGTTaGACCTTGTCAACAAGGTCATTGTGGGCAAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RYMPVTFTLSPG*TLSTRSLWAKR Trigger: CCTTTTTGCCCACAATGACCTTGTTGACAAGGTTCAACCAGGGGACAGAGTGAACGTCACAGGCATATATCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS GCA 72 bp | CACGTTGCTCACTCTTGGATTAACTCGAATTGGTACTaGTCGATATATGCCTGTGACGTTCACTCTGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: HVAHSWINSNWY*SIYACDVHSVP Trigger: GGGGACAGAGTGAACGTCACAGGCATATATCGAGCAGTACCAATTCGAGTTAATCCAAGAGTGAGCAACGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CCA 72 bp | TTGATCATTTGCTTGTCAGAGAAGAATGATCGGTTGTaGATCAGTGCCATGCTGTGGGTAGTGTGGCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LIICLSEKNDRL*ISAMLWVVWQC Trigger: GCACTGCCACACTACCCACAGCATGGCACTGATCCACAACCGATCATTCTTCTCTGACAAGCAAATGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CCA 72 bp | TGCTCGATATATGCCTGTGACGTTCACTCTGTCCCCTaGTTGAACCTTGTCAACAAGGTCATTGTGGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CSIYACDVHSVP*LNLVNKVIVGK Trigger: TTTGCCCACAATGACCTTGTTGACAAGGTTCAACCAGGGGACAGAGTGAACGTCACAGGCATATATCGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CAA 90 bp | TGGTACTGCTCGATATATGCCTGTGACGTTCACTCTGTCCCCTGGTaGAACCTTGTCAACAAGGTCATTGTGGGCAAAAAGGACAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: WYCSIYACDVHSVPW*NLVNKVIVGKKDNS Trigger: ACTATTGTCCTTTTTGCCCACAATGACCTTGTTGACAAGGTTCAACCAGGGGACAGAGTGAACGTCACAGGCATATATCGAGCAGTACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CAA 72 bp | AGTTTGATCATTTGCTTGTCAGAGAAGAATGATCGGTaGTGGATCAGTGCCATGCTGTGGGTAGTGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLIICLSEKNDR*WISAMLWVVWQ Trigger: CTGCCACACTACCCACAGCATGGCACTGATCCACAACCGATCATTCTTCTCTGACAAGCAAATGATCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
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| CDS CAA 72 bp | TCGATATATGCCTGTGACGTTCACTCTGTCCCCTGGTaGAACCTTGTCAACAAGGTCATTGTGGGCAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SIYACDVHSVPW*NLVNKVIVGKK Trigger: CTTTTTGCCCACAATGACCTTGTTGACAAGGTTCAACCAGGGGACAGAGTGAACGTCACAGGCATATATCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS CAA 90 bp | TGTTCCATGACCTCATGCAGCACAGACCTTGTGCTTTCATTCATTTaGTCAAACTCATCGATGCAGCATATCCCATTGTCACTCAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: CSMTSCSTDLVLSFI*SNSSMQHIPLSLRT Trigger: CGTCCTGAGTGACAATGGGATATGCTGCATCGATGAGTTTGACAAAATGAATGAAAGCACAAGGTCTGTGCTGCATGAGGTCATGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 72 bp | GATATCTTCATGTTCATAAATGCTGGGAGCCAAGGCTaGAGCAAGCCGCTCATAAATATCTGGCTTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DIFMFINAGSQG*SKPLINIWLPG Trigger: TCCAGGAAGCCAGATATTTATGAGCGGCTTGCTTCAGCCTTGGCTCCCAGCATTTATGAACATGAAGATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS GCA 72 bp | ACCTTGTGCTTTCATTCATTTTGTCAAACTCATCGATaGAGCATATCCCATTGTCACTCAGGACGAGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TLCFHSFCQTHR*SISHCHSGRGH Trigger: GTGCCCTCGTCCTGAGTGACAATGGGATATGCTGCATCGATGAGTTTGACAAAATGAATGAAAGCACAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 72 bp | CTCTTGAAGTTTGATCATTTGCTTGTCAGAGAAGAATaGTCGGTTGTGGATCAGTGCCATGCTGTGGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLKFDHLLVREE*SVVDQCHAVGS Trigger: ACTACCCACAGCATGGCACTGATCCACAACCGATCATTCTTCTCTGACAAGCAAATGATCAAACTTCAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
||
| CDS CCA 72 bp | AGACTTCACGTTGCTCACTCTTGGATTAACTCGAATTaGTACTGCTCGATATATGCCTGTGACGTTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLHVAHSWINSN*YCSIYACDVHS Trigger: AGAGTGAACGTCACAGGCATATATCGAGCAGTACCAATTCGAGTTAATCCAAGAGTGAGCAACGTGAAGTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
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| CDS TCA 72 bp | GATGTTCTGATGACCATGCCACTGATGGTGATGAGCTaGTCAATGTCTTCTGGATTCAAGTTTCTCATACTC | + |
|
Preference number: 6 (lower is better) Translates to: DVLMTMPLMVMS*SMSSGFKFLIL Trigger: GAGTATGAGAAACTTGAATCCAGAAGACATTGATCAGCTCATCACCATCAGTGGCATGGTCATCAGAACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
||
| CDS CCA 72 bp | ATTGACAGCCATGTCAAAGGTTGGTATAACCTCCTGTaGGTAGGAGATGAGCTGTCTATACAGATTTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IDSHVKGWYNLL*VGDELSIQIFA Trigger: AGCAAAAATCTGTATAGACAGCTCATCTCCTACCCACAGGAGGTTATACCAACCTTTGACATGGCTGTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000229606.2 |
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| CDS CCA 72 bp | CATGCCACTGATGGTGATGAGCTGATCAATGTCTTCTaGATTCAAGTTTCTCATACTCTTTGTCTTCAACGC | + |
|
Preference number: 6 (lower is better) Translates to: HATDGDELINVF*IQVSHTLCLQR Trigger: GCGTTGAAGACAAAGAGTATGAGAAACTTGAATCCAGAAGACATTGATCAGCTCATCACCATCAGTGGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000230437.2 |
||
| CDS CCA 72 bp | GTGGGTTTTATAGACAGACTTCACGTTGCTCACTCTTaGATTAACTCGAATTGGTACTGCTCGATATATGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGFIDRLHVAHS*INSNWYCSIYA Trigger: GGCATATATCGAGCAGTACCAATTCGAGTTAATCCAAGAGTGAGCAACGTGAAGTCTGTCTATAAAACCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS CCA 72 bp | GTGTCAGACTGTCCCCGAATATCCTCAAACAGCTGTTaGTACTTTAAGGCTGGTGTTTTACCCTTAGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: VSDCPRISSNSC*YFKAGVLPLDK Trigger: TTTATCTAAGGGTAAAACACCAGCCTTAAAGTACCAACAGCTGTTTGAGGATATTCGGGGACAGTCTGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS CAA 72 bp | ACCTCATGCAGCACAGACCTTGTGCTTTCATTCATTTaGTCAAACTCATCGATGCAGCATATCCCATTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TSCSTDLVLSFI*SNSSMQHIPLS Trigger: TGACAATGGGATATGCTGCATCGATGAGTTTGACAAAATGAATGAAAGCACAAGGTCTGTGCTGCATGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023353.4 |
||
| CDS CCA 72 bp | GTCAAAGAAGATCTCATTGACAGCCATGTCAAAGGTTaGTATAACCTCCTCTCCAAGTTGTTGCATGTACAA | + |
|
Preference number: 6 (lower is better) Translates to: VKEDLIDSHVKG*YNLLSKLLHVQ Trigger: TTGTACATGCAACAACTTGGAGAGGAGGTTATACCAACCTTTGACATGGCTGTCAATGAGATCTTCTTTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230437.2 |
||
| CDS CAA 90 bp | AAAGGTTGGTATAACCTCCTCTCCAAGTTGTTGCATGTACAAAGGTaGAGTAATATCTATGCCAACATTTTCTTCTTCTTTGGCCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KGWYNLLSKLLHVQR*SNIYANIFFFFGQR Trigger: CCTCTGGCCAAAGAAGAAGAAAATGTTGGCATAGATATTACTCAACCTTTGTACATGCAACAACTTGGAGAGGAGGTTATACCAACCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230437.2 |
||
| CDS CAA 90 bp | CTCTCCTGTAATATTAATCTCTCCAAGTTGTTGCATGTACAAAGGTaGAGTAATATCTATGCCAACATTTTCTTCTTCTTTGGCCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSCNINLSKLLHVQR*SNIYANIFFFFGQR Trigger: CCTCTGGCCAAAGAAGAAGAAAATGTTGGCATAGATATTACTCAACCTTTGTACATGCAACAACTTGGAGAGATTAATATTACAGGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023353.4 ENSMUST00000229606.2 |
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