Pregenerated sensors for MCM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041859Ensembl transcript IDs: ENSMUST00000053266.11
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTaGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAA | + |
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Preference number: 1 (lower is better) Translates to: MFRTGACEAGLLPES*PSLQLLPQGRSHTQ Trigger: TTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR TCA 90 bp | CTAATTGCAAAGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTaGGCCACTCTTGGCCCAACAGACCTCAAAGCTTCCTGGACTAAA | + |
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Preference number: 1 (lower is better) Translates to: LIAKKAFSNPTLSSA*ATLGPTDLKASWTK Trigger: TTTAGTCCAGGAAGCTTTGAGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTTTGCAATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR CAA 90 bp | TGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCCCTCCCTCCAGCTCTaGCCCCAAGGCAGAAGTCATACACAAAGCTTCCACCAAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CEAGLLPESWPSLQL*PQGRSHTQSFHQVL Trigger: CAGGACTTGGTGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAGGACTCAGGCAGAAGGCCTGCCTCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR CAA 90 bp | AGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTaGGCCCAACAGACCTCAAAGCTTCCTGGACTAAAGTGCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RKLSPIQPCHLPEPL*AQQTSKLPGLKCLG Trigger: CCCCAGGCACTTTAGTCCAGGAAGCTTTGAGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR-3UTR GCA 90 bp | AGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGACTTCCTGGACTAAAGTaGCTGGGGGTGGGGGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: SFLQSNLVICLSHSWPNRLPGLK*LGVGVK Trigger: TTTTACCCCCACCCCCAGGCACTTTAGTCCAGGAAG...TCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAAATGGGAGACAAAGGCTaGGGACAGGGCAGTACTTGG | + |
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Preference number: 2 (lower is better) Translates to: RKLSPIQPCHLPEPLLAQMGDKG*GQGSTW Trigger: CCAAGTACTGCCCTGTCCCCAGCCTTTGTCTCCCAT...TTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR-3UTR GCA 90 bp | TTGCAAAGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGCCTCCCTCCAGCTCTTaGCCCAAGGCAGAAGTCATA | + |
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Preference number: 2 (lower is better) Translates to: LQRKLSPIQPCHLPEPLLPPSSS*PKAEVI Trigger: TATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGG...CAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTTTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAACAATACATACTAGTCTAATTGCAAAGAAAGCTTTCTCCAATCCAACCGCTTCCACCAAGTCCTaGTCGTCTCACCATCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: RSTIHTSLIAKKAFSNPTASTKS*SSHHQL Trigger: AAGCTGATGGTGAGACGATCAGGACTTGGTGGAAGC...GGTTGGATTGGAGAAAGCTTTCTTTGCAATTAGACTAGTATGTATTGTTGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR-3UTR CCA 90 bp | AGGTCAACAATACATACTAGTCTAATTGCAAAGAAAGCTTTCTCCAATCCAACCAAAGTTACTGGAGGATaGGAGACAAAGGCTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: RSTIHTSLIAKKAFSNPTKVTGG*ETKAGD Trigger: GTCCCCAGCCTTTGTCTCCCATCCTCCAGTAACTTT...GGTTGGATTGGAGAAAGCTTTCTTTGCAATTAGACTAGTATGTATTGTTGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR TCA 72 bp | AGGACACAGCTGTGCCCAGAAACACAGCTCAAATCATaGAGACTCCCCATGTTTAGGACTGGGGCTTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: RTQLCPETQLKS*RLPMFRTGACE Trigger: CTCACAAGCCCCAGTCCTAAACATGGGGAGTCTTCATGATTTGAGCTGTGTTTCTGGGCACAGCTGTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR TCA 72 bp | AAGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTaGGCCACTCTTGGCCCAACAGACCTCAAAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: KKAFSNPTLSSA*ATLGPTDLKAS Trigger: GGAAGCTTTGAGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| 3UTR GCA 72 bp | TGCAAAGAAAGCTTTCTCCAATCCAACCTTGTCATCTaGCTGAGCCACTCTTGGCCCAACAGACCTCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: CKESFLQSNLVI*LSHSWPNRPQS Trigger: GCTTTGAGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | CCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCCCGCAGCCCTTCTTCCCTaGAAGGCAGCGGTAGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: PMFRTGACEAGLLPESWPAALLP*KAAVGP Trigger: GGGACCTACCGCTGCCTTCCAGGGAAGAAGGGCTGC...GGGCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | AGTCCTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTCACTGCAGCGGGCATTaGGCCGGGCATGGATGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SPGPPSSSCPKAEVIHKAHCSGH*AGHGCQ Trigger: CTGGCATCCATGCCCGGCTCAATGCCCGCTGCAGTG...AGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | TCCCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCACGTACCGCAGAAGCTaGGACTTGGCAACGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SPCLGLGLVRQAFCLSPGTYRRS*DLATEG Trigger: CCCCTCCGTTGCCAAGTCCCAGCTTCTGCGGTACGT...GCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | CTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCACCCGGGGCCCTGTATTaGTGCATCCTCAGGACGTGG | + |
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Preference number: 4 (lower is better) Translates to: LALPPALAPRQKSYTKLPPGALY*CILRTW Trigger: CCACGTCCTGAGGATGCACCAATACAGGGCCCCGGG...TGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | CCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCCCCGGCTCAGGCAAGCCTaGATTTCCTCTGAGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: PMFRTGACEAGLLPESWPRLRQA*ISSEEN Trigger: GTTCTCCTCAGAGGAAATCCAGGCTTGCCTGAGCCG...GGGCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | CCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCCCGGCCAGGATATCCACTaGACTACCCAATGGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PMFRTGACEAGLLPESWPGQDIH*TTQWQS Trigger: GCTTTGCCATTGGGTAGTTCAGTGGATATCCTGGCC...GGGCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | GTCCTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCTCAGGACGTGGTCTaGGATCTCCCGATCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: VLALPPALAPRQKSYTKLPQDVV*DLPILF Trigger: GAACAGGATCGGGAGATCTCAGACCACGTCCTGAGG...AAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | CTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCACTCCACGGCTTCCTCTaGATCCTGCAGGTCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: LALPPALAPRQKSYTKLPLHGFL*ILQVHS Trigger: ACTGTGGACCTGCAGGATGCAGAGGAAGCCGTGGAG...TGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | CATGAAGACTCCCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGACTGCTTGGCGTAGGTaGCGTCAATGGAGGCCACGA | + |
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Preference number: 4 (lower is better) Translates to: HEDSPCLGLGLVRQAFCLTAWRR*RQWRPR Trigger: TCGTGGCCTCCATTGACGCCACCTACGCCAAGCAGT...CAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGGGAGTCTTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | CCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCCCAGTCAGGATCGTCTGTaGCCAGGATATCCACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: PMFRTGACEAGLLPESWPSQDRL*PGYPLN Trigger: GTTCAGTGGATATCCTGGCCACAGACGATCCTGACT...GGGCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCATTTGGGGTGTGCACTTaGGGCATCTGCGTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LALPPALAPRQKSYTKLPFGVCT*GICVSA Trigger: AGCAGAGACGCAGATGCCTCAAGTGCACACCCCAAA...TGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCATCAGCCTGGGCTCACTaGGTTCCACTTTCTGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LALPPALAPRQKSYTKLPSAWAH*VPLSGS Trigger: ACTCCCAGAAAGTGGAACTCAGTGAGCCCAGGCTGA...TGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | AGTCCTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTGCTTCCTCTGCATCCTaGAGGTCCACAGTCTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SPGPPSSSCPKAEVIHKAASSAS*RSTVLL Trigger: GAGCAAGACTGTGGACCTGCAGGATGCAGAGGAAGC...AGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | AGTCCTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTGCATTGAGCCGGGCATaGATGCCAGCCTTTGCAATG | + |
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Preference number: 4 (lower is better) Translates to: SPGPPSSSCPKAEVIHKAALSRA*MPAFAM Trigger: CATTGCAAAGGCTGGCATCCATGCCCGGCTCAATGC...AGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | AGTCCTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTCTGGCTGCGCAGGCGTaGGTATTCTTCTGCAATGTA | + |
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Preference number: 4 (lower is better) Translates to: SPGPPSSSCPKAEVIHKALAAQA*VFFCNV Trigger: TACATTGCAGAAGAATACTCACGCCTGCGCAGCCAG...AGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | GCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCACCACCCACAGACTGCTCATaGGCTTCCTGGAACACTTCT | + |
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Preference number: 4 (lower is better) Translates to: ALPPALAPRQKSYTKLPPPTDCS*ASWNTS Trigger: AGAAGTGTTCCAGGAAGCTCATGAGCAGTCTGTGGG...TGGTGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | TTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGACCTAGTCATGCCCATGGATaGTCGGGGCTAACGACCGGG | + |
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Preference number: 4 (lower is better) Translates to: FLQSNLVICLSHSWPNRPSHAHG*SGLTTG Trigger: CCCGGTCGTTAGCCCCGAGCATCCATGGGCATGACT...AGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | ACTGGAGGATGGGAGACAAAGGCTGGGGACAGGGCAGTACTTGGTAGCAACAACATGGTCACTCGACCCTaGTCCATCACCTCGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: TGGWETKAGDRAVLGSNNMVTRP*SITSWM Trigger: CATCCACGAGGTGATGGAGCAGGGTCGAGTGACCAT...GTTGTTGCTACCAAGTACTGCCCTGTCCCCAGCCTTTGTCTCCCATCCTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | GTCCTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTATGGATGCCAGCCTTTaGAATGGTCACTCGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: VLALPPALAPRQKSYTKLMDASL*NGHSTL Trigger: CAGGGTCGAGTGACCATTGCAAAGGCTGGCATCCAT...AAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | ACTGGAGGATGGGAGACAAAGGCTGGGGACAGGGCAGTACTTGGTAGCAACAACTGCCAGCCTTTGCAATaGTCACTCGACCCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TGGWETKAGDRAVLGSNNCQPLQ*SLDPAP Trigger: TGGAGCAGGGTCGAGTGACCATTGCAAAGGCTGGCA...GTTGTTGCTACCAAGTACTGCCCTGTCCCCAGCCTTTGTCTCCCATCCTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | TCCCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCACAATCAGCCGATACTaGTTGTCACTGATCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SPCLGLGLVRQAFCLSPGTISRY*LSLISS Trigger: GGAACTGATCAGTGACAATCAGTATCGGCTGATTGT...GCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | CATGAAGACTCCCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTTTCCAGTGTCCGTaGTGTAACTGGAGATGTCCG | + |
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Preference number: 4 (lower is better) Translates to: HEDSPCLGLGLVRQAFCLSFQCP*CNWRCP Trigger: CGGACATCTCCAGTTACAGCACGGACACTGGAAACT...CAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGGGAGTCTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | CTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCAAGGCATCTGCGTCTCTaGTTCACTGAAGTCGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: LALPPALAPRQKSYTKLPRHLRL*FTEVVR Trigger: CCTTACGACTTCAGTGAAGCAGAGACGCAGATGCCT...TGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | TCCCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCGCCCAATGTTCTCCATaGGCGTCTTATACTGATCAT | + |
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Preference number: 4 (lower is better) Translates to: SPCLGLGLVRQAFCLSPGAQCSP*ASYTDH Trigger: ATGATCAGTATAAGACGCCCATGGAGAACATTGGGC...GCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | AGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGAGGGAGAGACGTGCTTTaGGCCAAAGCTGCCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SFLQSNLVICLSHSWPNRGRDVL*AKAAFQ Trigger: TTGGAAGGCAGCTTTGGCTCAAAGCACGTCTCTCCC...TCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | GTCCTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTGCAGAGAATGCAGGCTaGATATCCTTACTCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: VLALPPALAPRQKSYTKLAENAG*ISLLIC Trigger: GCAGATGAGTAAGGATATTCAGCCTGCATTCTCTGC...AAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | TCCCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCCTATTAGAAGAATATTaGTGTCTCCACGGATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SPCLGLGLVRQAFCLSPGLLEEY*CLHGCG Trigger: GCCACATCCGTGGAGACATCAATATTCTTCTAATAG...GCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | AGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAAGTCCGGGGAGAGACGTaGTTTGAGCCAAAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RKLSPIQPCHLPEPLLAQVRGET*FEPKLP Trigger: AGGCAGCTTTGGCTCAAAGCACGTCTCTCCCCGGAC...TTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | AGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAATCCTTCAAGGCCCGCTaGAAGGCAACCAGCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: RKLSPIQPCHLPEPLLAQSFKAR*KATSSS Trigger: TGAGGAGCTGGTTGCCTTCCAGCGGGCCTTGAAGGA...TTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | TTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGACCTAGCAGGGGCCTTCTCTaGCATCTCCTGGATGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: FLQSNLVICLSHSWPNRPSRGLL*HLLDGD Trigger: ATCACCATCCAGGAGATGCCAGAGAAGGCCCCTGCT...AGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | TTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGACCTCGCTCCCCTGTTTCCTaGTCTGTAGTGACAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FLQSNLVICLSHSWPNRPRSPVS*SVVTAA Trigger: AGCTGCTGTCACTACAGACCAGGAAACAGGGGAGCG...AGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | GCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCACCAATACCTGCCATAGACTaGATTGGCAGCTGCCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: ALPPALAPRQKSYTKLPPIPAID*IGSCQN Trigger: GTTTTGGCAGCTGCCAATCCAGTCTATGGCAGGTAT...TGGTGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | AGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGAGAGCTCATACTGTCCTaGCTGCGCAGGCGTGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: SFLQSNLVICLSHSWPNRELILS*LRRREY Trigger: ATACTCACGCCTGCGCAGCCAGGACAGTATGAGCTC...TCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | TTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGACCTCCTTCGCATGGGCCGTaGCCAGTCGAATCAGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: FLQSNLVICLSHSWPNRPPSHGP*PVESEF Trigger: AAACTCTGATTCGACTGGCCACGGCCCATGCGAAGG...AGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | GTAAAAACACAAGTAACAAACGCAGGACACAGCTGTGCCCAGAAACACAGCTCAATCCGGGCCTTCGCATaGGCCGTGGCCAGTCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: VKTQVTNAGHSCAQKHSSIRAFA*AVASRI Trigger: GATTCGACTGGCCACGGCCCATGCGAAGGCCCGGAT...TGAGCTGTGTTTCTGGGCACAGCTGTGTCCTGCGTTTGTTACTTGTGTTTTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | GCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCACCAAGGACTCTCCATCCTTaGCATGAGTCTTCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALPPALAPRQKSYTKLPPRTLHP*HESSSF Trigger: AAAGGAGGAAGACTCATGCCAAGGATGGAGAGTCCT...TGGTGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | AAAACACAAGTAACAAACGCAGGACACAGCTGTGCCCAGAAACACAGCTCAAATACAGAGCGAGGGAGCTaGCCAGCAGGGGCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTQVTNAGHSCAQKHSSNTERGS*PAGAFS Trigger: AGAGAAGGCCCCTGCTGGTCAGCTCCCTCGCTCTGT...ATTTGAGCTGTGTTTCTGGGCACAGCTGTGTCCTGCGTTTGTTACTTGTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | GCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCACCAGCTTTGAGCCAAAGCTaGCTTCCAATCCTATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALPPALAPRQKSYTKLPPALSQS*LPILCR Trigger: TCTACATAGGATTGGAAGGCAGCTTTGGCTCAAAGC...TGGTGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | TTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGACCTAACGACCGGGCCAGCTaGTCAAAGACATCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLQSNLVICLSHSWPNRPNDRAS*SKTSLE Trigger: TTCCAAGGATGTCTTTGAGCAGCTGGCCCGGTCGTT...AGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | TTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGACCTATGGATTCTGTGAGGTaGAGCATGCCCACAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLQSNLVICLSHSWPNRPMDSVR*SMPTDC Trigger: GCAGTCTGTGGGCATGCTCCACCTCACAGAATCCAT...AGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | AGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAAGCATCTCCTGGATGGTaGTGGTCTGATGGTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKLSPIQPCHLPEPLLAQASPGW*WSDGPC Trigger: ACAAGGACCATCAGACCATCACCATCCAGGAGATGC...TTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | AAAGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCGGTCATCGTCTAGAATaGCATCCACAGAGCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KESFLQSNLVICLSHSWPGHRLE*HPQSEG Trigger: TCCCTCGCTCTGTGGATGTCATTCTAGACGATGACC...GGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | AGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGAGACAGTAGTGAACACTaGGAACGACTTTGGGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFLQSNLVICLSHSWPNRDSSEH*ERLWGE Trigger: TTCGCCCCAAAGTCGTTCGCAGTGTTCACTACTGTC...TCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | CATGAAGACTCCCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGTATACTGATCATACCTaGCATAGACTGGATTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HEDSPCLGLGLVRQAFCLYTDHT*HRLDWQ Trigger: CTGCCAATCCAGTCTATGGCAGGTATGATCAGTATA...CAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGGGAGTCTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | AAAGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCGACAGCAGTGAGTCCTaGAGCCCAATGTTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KESFLQSNLVICLSHSWPDSSES*SPMFSM Trigger: CATGGAGAACATTGGGCTGCAGGACTCACTGCTGTC...GGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | GTAAAAACACAAGTAACAAACGCAGGACACAGCTGTGCCCAGAAACACAGCTCACCATCACCTCGTGGATaGCTGTGCGGTCCATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKTQVTNAGHSCAQKHSSPSPRG*LCGPCQ Trigger: CTGACATGGACCGCACAGCCATCCACGAGGTGATGG...TGAGCTGTGTTTCTGGGCACAGCTGTGTCCTGCGTTTGTTACTTGTGTTTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | AGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAAGCAGGTCATTCACGCTaGCAATCAGCCGATACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKLSPIQPCHLPEPLLAQAGHSR*QSADTD Trigger: ATCAGTATCGGCTGATTGTCAGCGTGAATGACCTGC...TTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | GTAAAAACACAAGTAACAAACGCAGGACACAGCTGTGCCCAGAAACACAGCTCAAGCCTGGATTTCCTCTaGGGAGAACGGCTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKTQVTNAGHSCAQKHSSSLDFL*GERLFS Trigger: AGAGAAGAGCCGTTCTCCTCAGAGGAAATCCAGGCT...TGAGCTGTGTTTCTGGGCACAGCTGTGTCCTGCGTTTGTTACTTGTGTTTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | TTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGACCTGAGCAAGCAGAGGATTaGCTTCTTGACATAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FLQSNLVICLSHSWPNRPEQAED*LLDIVM Trigger: CATGACTATGTCAAGAAGGCAATCCTCTGCTTGCTC...AGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | AGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAATCATCGGTCTTCTCTTaGGAATCGTCAGTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKLSPIQPCHLPEPLLAQSSVFS*ESSVFG Trigger: CCCAAAGACTGACGATTCCCAAGAGAAGACCGATGA...TTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | AAAACACAAGTAACAAACGCAGGACACAGCTGTGCCCAGAAACACAGCTCAAATTCTCCATCCTTGGCATaGGTCTTCCTCCTTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KTQVTNAGHSCAQKHSSNSPSLA*VFLLFR Trigger: GCGGAAAAGGAGGAAGACTCATGCCAAGGATGGAGA...ATTTGAGCTGTGTTTCTGGGCACAGCTGTGTCCTGCGTTTGTTACTTGTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | TTGCAAAGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGTGCCATAGACTGGATTaGCAGCTGCCAAAACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQRKLSPIQPCHLPEPLLCHRLD*QLPKHC Trigger: GCAGTGTTTTGGCAGCTGCCAATCCAGTCTATGGCA...CAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTTTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | GTAAAAACACAAGTAACAAACGCAGGACACAGCTGTGCCCAGAAACACAGCTCATCAGACACCATGACCTaGTTATCATCCTGCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VKTQVTNAGHSCAQKHSSSDTMT*LSSCIR Trigger: CCGGATGCAGGATGATAACCAGGTCATGGTGTCTGA...TGAGCTGTGTTTCTGGGCACAGCTGTGTCCTGCGTTTGTTACTTGTGTTTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | GTAAAAACACAAGTAACAAACGCAGGACACAGCTGTGCCCAGAAACACAGCTCAAGAGGATTGCCTTCTTaGCATAGTCATGCCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKTQVTNAGHSCAQKHSSRGLPS*HSHAHG Trigger: TCCATGGGCATGACTATGTCAAGAAGGCAATCCTCT...TGAGCTGTGTTTCTGGGCACAGCTGTGTCCTGCGTTTGTTACTTGTGTTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | AAAGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCTCTCCTTTTTCTTCTTaGTCCCATGTAGAAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KESFLQSNLVICLSHSWPSPFSS*SHVEGC Trigger: ACAGCCTTCTACATGGGACCAAGAAGAAAAAGGAGA...GGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | AGGTCAACAATACATACTAGTCTAATTGCAAAGAAAGCTTTCTCCAATCCAACCGACTGGATTGGCAGCTaGCAAAACACTGCAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTIHTSLIAKKAFSNPTDWIGS*QNTAAG Trigger: GCCCGCTGCAGTGTTTTGGCAGCTGCCAATCCAGTC...GGTTGGATTGGAGAAAGCTTTCTTTGCAATTAGACTAGTATGTATTGTTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | AGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAAATATCCTTACTCATCTaGTTCACATTACAGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: RKLSPIQPCHLPEPLLAQISLLI*FTLQAI Trigger: GATTGCCTGTAATGTGAAGCAGATGAGTAAGGATAT...TTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | TTGCAAAGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGCATGCTTCTCATAAATaGGGGTATCTTGCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQRKLSPIQPCHLPEPLLHASHK*GYLAGH Trigger: ATGACCAGCAAGATACCCGCATTTATGAGAAGCATG...CAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTTTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR GCA 90 bp | AGGTCAACAATACATACTAGTCTAATTGCAAAGAAAGCTTTCTCCAATCCAACCCTCCTTTTCCGCTTCTaGTCAGTGTCTTCCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSTIHTSLIAKKAFSNPTLLFRF*SVSSWL Trigger: GAGCCAGGAAGACACTGAGCAGAAGCGGAAAAGGAG...GGTTGGATTGGAGAAAGCTTTCTTTGCAATTAGACTAGTATGTATTGTTGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | AGGTCAACAATACATACTAGTCTAATTGCAAAGAAAGCTTTCTCCAATCCAACCACTCCTCATACTGCTTaGCGTAGGTGGCGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RSTIHTSLIAKKAFSNPTTPHTA*RRWRQW Trigger: CCATTGACGCCACCTACGCCAAGCAGTATGAGGAGT...GGTTGGATTGGAGAAAGCTTTCTTTGCAATTAGACTAGTATGTATTGTTGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | AAAACACAAGTAACAAACGCAGGACACAGCTGTGCCCAGAAACACAGCTCAAATTCTCCAGAACCTTCTTaGAATAAGCATACTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KTQVTNAGHSCAQKHSSNSPEPS*NKHTEP Trigger: TGGTTCAGTATGCTTATTTCAAGAAGGTTCTGGAGA...ATTTGAGCTGTGTTTCTGGGCACAGCTGTGTCCTGCGTTTGTTACTTGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR TCA 90 bp | AGGTCAACAATACATACTAGTCTAATTGCAAAGAAAGCTTTCTCCAATCCAACCAAATCTAGACAGCAGTaGGTCCTGCAGCCCAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSTIHTSLIAKKAFSNPTKSRQQ*VLQPNV Trigger: AACATTGGGCTGCAGGACTCACTGCTGTCTAGATTT...GGTTGGATTGGAGAAAGCTTTCTTTGCAATTAGACTAGTATGTATTGTTGACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CCA 90 bp | AGGTCAACAATACATACTAGTCTAATTGCAAAGAAAGCTTTCTCCAATCCAACCTCTCCTCATCCTTTGTaGGATAAACAGAACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSTIHTSLIAKKAFSNPTSPHPL*DKQNWM Trigger: CATCCAGTTCTGTTTATCCCACAAAGGATGAGGAGA...GGTTGGATTGGAGAAAGCTTTCTTTGCAATTAGACTAGTATGTATTGTTGACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS GCA 90 bp | CTCCAGAGGAGCCCCGTCCCGTGGTGGGAATGGCCCTGGGCGCCGTaGAAAGCACGTACCGCAGAAGCTGGGACTTGGCAACGGAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LQRSPVPWWEWPWAP*KARTAEAGTWQRRG Trigger: ACCCCTCCGTTGCCAAGTCCCAGCTTCTGCGGTACGTGCTTTGCACGGCGCCCAGGGCCATTCCCACCACGGGACGGGGCTCCTCTGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 90 bp | GTTCCCGCTCCACCCCTCCCAGGAGCAAGCAGAGGATTGCCTTCTTaGCATAGTCATGCCCATGGATGCTCGGGGCTAACGACCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPAPPLPGASRGLPS*HSHAHGCSGLTTGP Trigger: TGGCCCGGTCGTTAGCCCCGAGCATCCATGGGCATGACTATGTCAAGAAGGCAATCCTCTGCTTGCTCCTGGGAGGGGTGGAGCGGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 90 bp | GGATTGGCAGCTGCCAAAACACTGCAGCGGGCATTGAGCCGGGCATaGATGCCAGCCTTTGCAATGGTCACTCGACCCTGCTCCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: GLAAAKTLQRALSRA*MPAFAMVTRPCSIT Trigger: GGTGATGGAGCAGGGTCGAGTGACCATTGCAAAGGCTGGCATCCATGCCCGGCTCAATGCCCGCTGCAGTGTTTTGGCAGCTGCCAATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 90 bp | CCCAATGGCAAAGCATCACCGTCCTGCTCCCCCGGGGCCCTGTATTaGTGCATCCTCAGGACGTGGTCTGAGATCTCCCGATCCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PNGKASPSCSPGALY*CILRTWSEISRSCS Trigger: TGAACAGGATCGGGAGATCTCAGACCACGTCCTGAGGATGCACCAATACAGGGCCCCGGGGGAGCAGGACGGTGATGCTTTGCCATTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CAA 90 bp | GTCCTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCGCAGAAGCTGGGACTaGGCAACGGAGGGGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VLALPPALAPRQKSYTKLRRSWD*ATEGSP Trigger: AGGTGACCCCTCCGTTGCCAAGTCCCAGCTTCTGCG...AAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CAA 90 bp | GCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCACCAACACTGCAGCGGGCATaGAGCCGGGCATGGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALPPALAPRQKSYTKLPPTLQRA*SRAWMP Trigger: TGGCATCCATGCCCGGCTCAATGCCCGCTGCAGTGT...TGGTGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS GCA 90 bp | AATGGCAAAGCATCACCGTCCTGCTCCCCCGGGGCCCTGTATTGGTaGATCCTCAGGACGTGGTCTGAGATCTCCCGATCCTGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NGKASPSCSPGALYW*ILRTWSEISRSCSG Trigger: TCCTGAACAGGATCGGGAGATCTCAGACCACGTCCTGAGGATGCACCAATACAGGGCCCCGGGGGAGCAGGACGGTGATGCTTTGCCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS GCA 90 bp | GCCAGGATATCCACTGAACTACCCAATGGCAAAGCATCACCGTCCTaGTCCCCCGGGGCCCTGTATTGGTGCATCCTCAGGACGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARISTELPNGKASPS*SPGALYWCILRTWS Trigger: AGACCACGTCCTGAGGATGCACCAATACAGGGCCCCGGGGGAGCAGGACGGTGATGCTTTGCCATTGGGTAGTTCAGTGGATATCCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 90 bp | TCTGCATCCTGCAGGTCCACAGTCTTGCTCATCCGGGCCTTCGCATaGGCCGTGGCCAGTCGAATCAGAGTTTCCAGTGTCCGTGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SASCRSTVLLIRAFA*AVASRIRVSSVRAV Trigger: TACAGCACGGACACTGGAAACTCTGATTCGACTGGCCACGGCCCATGCGAAGGCCCGGATGAGCAAGACTGTGGACCTGCAGGATGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CAA 90 bp | TCCCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCCATGGATGCCAGCCTTaGCAATGGTCACTCGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPCLGLGLVRQAFCLSPGHGCQP*QWSLDP Trigger: AGGGTCGAGTGACCATTGCAAAGGCTGGCATCCATG...GCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 90 bp | TCCACCAGGTCATCGTCTAGAATGACATCCACAGAGCGAGGGAGCTaGCCAGCAGGGGCCTTCTCTGGCATCTCCTGGATGGTGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: STRSSSRMTSTERGS*PAGAFSGISWMVMV Trigger: GACCATCACCATCCAGGAGATGCCAGAGAAGGCCCCTGCTGGTCAGCTCCCTCGCTCTGTGGATGTCATTCTAGACGATGACCTGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 90 bp | TGCCATAGACTGGATTGGCAGCTGCCAAAACACTGCAGCGGGCATTaGGCCGGGCATGGATGCCAGCCTTTGCAATGGTCACTCGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: CHRLDWQLPKHCSGH*AGHGCQPLQWSLDP Trigger: AGGGTCGAGTGACCATTGCAAAGGCTGGCATCCATGCCCGGCTCAATGCCCGCTGCAGTGTTTTGGCAGCTGCCAATCCAGTCTATGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 90 bp | CTGCTCCCCCGGGGCCCTGTATTGGTGCATCCTCAGGACGTGGTCTaGGATCTCCCGATCCTGTTCAGGATCCATCTGATCCAGCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLPRGPVLVHPQDVV*DLPILFRIHLIQHD Trigger: ATCATGCTGGATCAGATGGATCCTGAACAGGATCGGGAGATCTCAGACCACGTCCTGAGGATGCACCAATACAGGGCCCCGGGGGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS GCA 90 bp | GGGCGTCTTATACTGATCATACCTGCCATAGACTGGATTGGCAGCTaGCAAAACACTGCAGCGGGCATTGAGCCGGGCATGGATGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRLILIIPAIDWIGS*QNTAAGIEPGMDAS Trigger: GCTGGCATCCATGCCCGGCTCAATGCCCGCTGCAGTGTTTTGGCAGCTGCCAATCCAGTCTATGGCAGGTATGATCAGTATAAGACGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 90 bp | GTGGGAATGGCCCTGGGCGCCGTGCAAAGCACGTACCGCAGAAGCTaGGACTTGGCAACGGAGGGGTCACCTATTAGAAGAATATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VGMALGAVQSTYRRS*DLATEGSPIRRILM Trigger: CATCAATATTCTTCTAATAGGTGACCCCTCCGTTGCCAAGTCCCAGCTTCTGCGGTACGTGCTTTGCACGGCGCCCAGGGCCATTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 90 bp | AATGACATCCACAGAGCGAGGGAGCTGACCAGCAGGGGCCTTCTCTaGCATCTCCTGGATGGTGATGGTCTGATGGTCCTTGTAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: NDIHRARELTSRGLL*HLLDGDGLMVLVDR Trigger: TCTGTCTACAAGGACCATCAGACCATCACCATCCAGGAGATGCCAGAGAAGGCCCCTGCTGGTCAGCTCCCTCGCTCTGTGGATGTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CAA 90 bp | CCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGAGTCCTGGCCCTGCTCAAAGACATCCTaGGAACGAGTTTTGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PMFRTGACEAGLLPESWPCSKTS*ERVLLN Trigger: GTTCAGCAAAACTCGTTCCAAGGATGTCTTTGAGCA...GGGCCAGGACTCAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 90 bp | TTCTGTCACCAGGCTTCACTTTATCCACCAGGTCATCGTCTAGAATaGCATCCACAGAGCGAGGGAGCTGACCAGCAGGGGCCTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FCHQASLYPPGHRLE*HPQSEGADQQGPSL Trigger: CAGAGAAGGCCCCTGCTGGTCAGCTCCCTCGCTCTGTGGATGTCATTCTAGACGATGACCTGGTGGATAAAGTGAAGCCTGGTGACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 90 bp | AGCCTGGGCTCACTGAGTTCCACTTTCTGGGAGTCCTGGGTCTCCTaGGAATCATCGGTCTTCTCTTGGGAATCGTCAGTCTTTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGSLSSTFWESWVS*ESSVFSWESSVFGV Trigger: CACCCCAAAGACTGACGATTCCCAAGAGAAGACCGATGATTCTCAGGAGACCCAGGACTCCCAGAAAGTGGAACTCAGTGAGCCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS GCA 90 bp | ATAAGGAAGACGATGCCCTCAGACACCATGACCTGGTTATCATCCTaGATCCGGCTCAGGCAAGCCTGGATTTCCTCTGAGGAGAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: IRKTMPSDTMTWLSS*IRLRQAWISSEENG Trigger: GCCGTTCTCCTCAGAGGAAATCCAGGCTTGCCTGAGCCGGATGCAGGATGATAACCAGGTCATGGTGTCTGAGGGCATCGTCTTCCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS CCA 90 bp | ATCCTATGTAGAACTCCTCATACTGCTTGGCGTAGGTGGCGTCAATaGAGGCCACGAAATCCTTCAAGGCCCGCTGGAAGGCAACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILCRTPHTAWRRWRQ*RPRNPSRPAGRQPA Trigger: AGCTGGTTGCCTTCCAGCGGGCCTTGAAGGATTTCGTGGCCTCCATTGACGCCACCTACGCCAAGCAGTATGAGGAGTTCTACATAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS CCA 90 bp | TGCCTTCCAATCCTATGTAGAACTCCTCATACTGCTTGGCGTAGGTaGCGTCAATGGAGGCCACGAAATCCTTCAAGGCCCGCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLPILCRTPHTAWRR*RQWRPRNPSRPAGR Trigger: CCTTCCAGCGGGCCTTGAAGGATTTCGTGGCCTCCATTGACGCCACCTACGCCAAGCAGTATGAGGAGTTCTACATAGGATTGGAAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS-3UTR CAA 90 bp | AGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGAGGGGAGAGACGTGCTTaGAGCCAAAGCTGCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLQSNLVICLSHSWPNRGERRA*SQSCLP Trigger: TGGAAGGCAGCTTTGGCTCAAAGCACGTCTCTCCCC...TCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 90 bp | CGGTTGATGGATTCTGTGAGGTGGAGCATGCCCACAGACTGCTCATaGGCTTCCTGGAACACTTCTAAGAGGGCCGCCTTAAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLMDSVRWSMPTDCS*ASWNTSKRAALKAF Trigger: GAAGGCTTTTAAGGCGGCCCTCTTAGAAGTGTTCCAGGAAGCTCATGAGCAGTCTGTGGGCATGCTCCACCTCACAGAATCCATCAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS GCA 90 bp | GGAATCGTCAGTCTTTGGGGTGTGCACTTGAGGCATCTGCGTCTCTaGTTCACTGAAGTCGTAAGGGTCATAGGACTCTCCATCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GIVSLWGVHLRHLRL*FTEVVRVIGLSILG Trigger: GCCAAGGATGGAGAGTCCTATGACCCTTACGACTTCAGTGAAGCAGAGACGCAGATGCCTCAAGTGCACACCCCAAAGACTGACGATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS CCA 90 bp | AGCCAAAGCTGCCTTCCAATCCTATGTAGAACTCCTCATACTGCTTaGCGTAGGTGGCGTCAATGGAGGCCACGAAATCCTTCAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQSCLPILCRTPHTA*RRWRQWRPRNPSRP Trigger: GGGCCTTGAAGGATTTCGTGGCCTCCATTGACGCCACCTACGCCAAGCAGTATGAGGAGTTCTACATAGGATTGGAAGGCAGCTTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS CCA 90 bp | GACACCATGACCTGGTTATCATCCTGCATCCGGCTCAGGCAAGCCTaGATTTCCTCTGAGGAGAACGGCTCTTCTCTATTCCGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: DTMTWLSSCIRLRQA*ISSEENGSSLFRLM Trigger: CATCAACCGGAATAGAGAAGAGCCGTTCTCCTCAGAGGAAATCCAGGCTTGCCTGAGCCGGATGCAGGATGATAACCAGGTCATGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCATCTTCTCTATTCCGGTaGATGGATTCTGTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LALPPALAPRQKSYTKLPSSLFR*MDSVRW Trigger: CCACCTCACAGAATCCATCAACCGGAATAGAGAAGA...TGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 90 bp | CTGGTTATCATCCTGCATCCGGCTCAGGCAAGCCTGGATTTCCTCTaGGGAGAACGGCTCTTCTCTATTCCGGTTGATGGATTCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVIILHPAQASLDFL*GERLFSIPVDGFCE Trigger: CTCACAGAATCCATCAACCGGAATAGAGAAGAGCCGTTCTCCTCAGAGGAAATCCAGGCTTGCCTGAGCCGGATGCAGGATGATAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS-3UTR CAA 90 bp | GTAAAAACACAAGTAACAAACGCAGGACACAGCTGTGCCCAGAAACACAGCTCATGCAGGTCCACAGTCTaGCTCATCCGGGCCTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VKTQVTNAGHSCAQKHSSCRSTV*LIRAFA Trigger: TGCGAAGGCCCGGATGAGCAAGACTGTGGACCTGCA...TGAGCTGTGTTTCTGGGCACAGCTGTGTCCTGCGTTTGTTACTTGTGTTTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 90 bp | CTCAGGACGTGGTCTGAGATCTCCCGATCCTGTTCAGGATCCATCTaGTCCAGCATGATGAAGAGCAGGTCAAATCTAGACAGCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRTWSEISRSCSGSI*SSMMKSRSNLDSSE Trigger: CTCACTGCTGTCTAGATTTGACCTGCTCTTCATCATGCTGGATCAGATGGATCCTGAACAGGATCGGGAGATCTCAGACCACGTCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CAA 90 bp | AAAGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCGTTCTGGTAAATGCCTaGGTCCTCCTCGTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KESFLQSNLVICLSHSWPVLVNA*VLLVIQ Trigger: CTGGATGACGAGGAGGACCAAGGCATTTACCAGAAC...GGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAATCTGTCTCCAGGGGGTaGTTCTCCTCATCCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKLSPIQPCHLPEPLLAQSVSRG*FSSSFV Trigger: CACAAAGGATGAGGAGAACAACCCCCTGGAGACAGA...TTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCTCCCTCCAGCTCTTGCCCCAAGGCAGAAGTCATACACAAAGCTTCCAGTTTTGCTGAACTTCTaGATCTTGGCTATATCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LALPPALAPRQKSYTKLPVLLNF*ILAISS Trigger: GGACGATATAGCCAAGATCAAGAAGTTCAGCAAAAC...TGGAAGCTTTGTGTATGACTTCTGCCTTGGGGCAAGAGCTGGAGGGAGGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS-3UTR CAA 90 bp | CATGAAGACTCCCCATGTTTAGGACTGGGGCTTGTGAGGCAGGCCTTCTGCCTGTCCTTGGAACGAGTTTaGCTGAACTTCTTGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HEDSPCLGLGLVRQAFCLSLERV*LNFLIL Trigger: CAAGATCAAGAAGTTCAGCAAAACTCGTTCCAAGGA...CAGGCAGAAGGCCTGCCTCACAAGCCCCAGTCCTAAACATGGGGAGTCTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 90 bp | CATCTGATCCAGCATGATGAAGAGCAGGTCAAATCTAGACAGCAGTaGGTCCTGCAGCCCAATGTTCTCCATGGGCGTCTTATACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: HLIQHDEEQVKSRQQ*VLQPNVLHGRLILI Trigger: GATCAGTATAAGACGCCCATGGAGAACATTGGGCTGCAGGACTCACTGCTGTCTAGATTTGACCTGCTCTTCATCATGCTGGATCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 90 bp | CCTCACTTGCCTTCTTACGTTTCTTCTCCTTCTCCAGAACCTTCTTaGAATAAGCATACTGAACCAGCTCCACGGCTTCCTCTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PHLPSYVSSPSPEPS*NKHTEPAPRLPLHP Trigger: AGGATGCAGAGGAAGCCGTGGAGCTGGTTCAGTATGCTTATTTCAAGAAGGTTCTGGAGAAGGAGAAGAAACGTAAGAAGGCAAGTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CAA 90 bp | AAAGAAAGCTTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCATAAATGCGGGTATCTaGCTGGTCATCCTGGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: KESFLQSNLVICLSHSWPINAGI*LVILGK Trigger: TTTACCCAGGATGACCAGCAAGATACCCGCATTTAT...GGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAAGCTTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CAA 90 bp | TTTCTCCAATCCAACCTTGTCATCTGCCTGAGCCACTCTTGGCCCAACAGACCTCTGATTCATCCTCACTaGCCTTCTTACGTTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLQSNLVICLSHSWPNRPLIHPH*PSYVSS Trigger: AGAAGAAACGTAAGAAGGCAAGTGAGGATGAATCAG...AGGTCTGTTGGGCCAAGAGTGGCTCAGGCAGATGACAAGGTTGGATTGGAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 90 bp | CTGAACTTCTTGATCTTGGCTATATCGTCCGCAGAGAATGCAGGCTaGATATCCTTACTCATCTGCTTCACATTACAGGCAATCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LNFLILAISSAENAG*ISLLICFTLQAIRT Trigger: CGTCCTGATTGCCTGTAATGTGAAGCAGATGAGTAAGGATATTCAGCCTGCATTCTCTGCGGACGATATAGCCAAGATCAAGAAGTTCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CAA 90 bp | AAAACACAAGTAACAAACGCAGGACACAGCTGTGCCCAGAAACACAGCTCAAATCCTATTAGAAGAATATaGATGTCTCCACGGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KTQVTNAGHSCAQKHSSNPIRRI*MSPRMW Trigger: CCACATCCGTGGAGACATCAATATTCTTCTAATAGG...ATTTGAGCTGTGTTTCTGGGCACAGCTGTGTCCTGCGTTTGTTACTTGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS GCA 90 bp | AGTTTTGCTGAACTTCTTGATCTTGGCTATATCGTCCGCAGAGAATaGAGGCTGAATATCCTTACTCATCTGCTTCACATTACAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SFAELLDLGYIVRRE*RLNILTHLLHITGN Trigger: ATTGCCTGTAATGTGAAGCAGATGAGTAAGGATATTCAGCCTGCATTCTCTGCGGACGATATAGCCAAGATCAAGAAGTTCAGCAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS-3UTR CAA 90 bp | AGGTCAACAATACATACTAGTCTAATTGCAAAGAAAGCTTTCTCCAATCCAACCCTGAACTTCTTGATCTaGGCTATATCGTCCGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSTIHTSLIAKKAFSNPTLNFLI*AISSAE Trigger: CTCTGCGGACGATATAGCCAAGATCAAGAAGTTCAG...GGTTGGATTGGAGAAAGCTTTCTTTGCAATTAGACTAGTATGTATTGTTGACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | CTCCAGAGGAGCCCCGTCCCGTGGTGGGAATGGCCCTaGGCGCCGTGCAAAGCACGTACCGCAGAAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LQRSPVPWWEWP*APCKARTAEAG Trigger: CCCAGCTTCTGCGGTACGTGCTTTGCACGGCGCCCAGGGCCATTCCCACCACGGGACGGGGCTCCTCTGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS GCA 72 bp | AGCCCCGTCCCGTGGTGGGAATGGCCCTGGGCGCCGTaGAAAGCACGTACCGCAGAAGCTGGGACTTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SPVPWWEWPWAP*KARTAEAGTWQ Trigger: TTGCCAAGTCCCAGCTTCTGCGGTACGTGCTTTGCACGGCGCCCAGGGCCATTCCCACCACGGGACGGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS GCA 72 bp | GCATCACCGTCCTGCTCCCCCGGGGCCCTGTATTGGTaGATCCTCAGGACGTGGTCTGAGATCTCCCGATCC | + |
|
Preference number: 6 (lower is better) Translates to: ASPSCSPGALYW*ILRTWSEISRS Trigger: GGATCGGGAGATCTCAGACCACGTCCTGAGGATGCACCAATACAGGGCCCCGGGGGAGCAGGACGGTGATGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 72 bp | TCCACGGCTTCCTCTGCATCCTGCAGGTCCACAGTCTaGCTCATCCGGGCCTTCGCATGGGCCGTGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: STASSASCRSTV*LIRAFAWAVAS Trigger: ACTGGCCACGGCCCATGCGAAGGCCCGGATGAGCAAGACTGTGGACCTGCAGGATGCAGAGGAAGCCGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | GCCCTGGGCGCCGTGCAAAGCACGTACCGCAGAAGCTaGGACTTGGCAACGGAGGGGTCACCTATTAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALGAVQSTYRRS*DLATEGSPIRR Trigger: TCTTCTAATAGGTGACCCCTCCGTTGCCAAGTCCCAGCTTCTGCGGTACGTGCTTTGCACGGCGCCCAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | GCTGCCAAAACACTGCAGCGGGCATTGAGCCGGGCATaGATGCCAGCCTTTGCAATGGTCACTCGACCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AAKTLQRALSRA*MPAFAMVTRPC Trigger: GCAGGGTCGAGTGACCATTGCAAAGGCTGGCATCCATGCCCGGCTCAATGCCCGCTGCAGTGTTTTGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | AAAGCATCACCGTCCTGCTCCCCCGGGGCCCTGTATTaGTGCATCCTCAGGACGTGGTCTGAGATCTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: KASPSCSPGALY*CILRTWSEISR Trigger: TCGGGAGATCTCAGACCACGTCCTGAGGATGCACCAATACAGGGCCCCGGGGGAGCAGGACGGTGATGCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS CCA 72 bp | CCACAGTCTTGCTCATCCGGGCCTTCGCATGGGCCGTaGCCAGTCGAATCAGAGTTTCCAGTGTCCGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PQSCSSGPSHGP*PVESEFPVSVL Trigger: CAGCACGGACACTGGAAACTCTGATTCGACTGGCCACGGCCCATGCGAAGGCCCGGATGAGCAAGACTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | CACAGAGCGAGGGAGCTGACCAGCAGGGGCCTTCTCTaGCATCTCCTGGATGGTGATGGTCTGATGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HRARELTSRGLL*HLLDGDGLMVL Trigger: AAGGACCATCAGACCATCACCATCCAGGAGATGCCAGAGAAGGCCCCTGCTGGTCAGCTCCCTCGCTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | TCCCCCGGGGCCCTGTATTGGTGCATCCTCAGGACGTaGTCTGAGATCTCCCGATCCTGTTCAGGATCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SPGALYWCILRT*SEISRSCSGSI Trigger: GATGGATCCTGAACAGGATCGGGAGATCTCAGACCACGTCCTGAGGATGCACCAATACAGGGCCCCGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS CCA 72 bp | TGCAGGTCCACAGTCTTGCTCATCCGGGCCTTCGCATaGGCCGTGGCCAGTCGAATCAGAGTTTCCAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CRSTVLLIRAFA*AVASRIRVSSV Trigger: GACACTGGAAACTCTGATTCGACTGGCCACGGCCCATGCGAAGGCCCGGATGAGCAAGACTGTGGACCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 72 bp | CCACCCCTCCCAGGAGCAAGCAGAGGATTGCCTTCTTaGCATAGTCATGCCCATGGATGCTCGGGGCTAACG | + |
|
Preference number: 6 (lower is better) Translates to: PPLPGASRGLPS*HSHAHGCSGLT Trigger: CGTTAGCCCCGAGCATCCATGGGCATGACTATGTCAAGAAGGCAATCCTCTGCTTGCTCCTGGGAGGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 72 bp | TCATCGTCTAGAATGACATCCACAGAGCGAGGGAGCTaGCCAGCAGGGGCCTTCTCTGGCATCTCCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSSRMTSTERGS*PAGAFSGISWM Trigger: CATCCAGGAGATGCCAGAGAAGGCCCCTGCTGGTCAGCTCCCTCGCTCTGTGGATGTCATTCTAGACGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 72 bp | CGGGGCCCTGTATTGGTGCATCCTCAGGACGTGGTCTaGGATCTCCCGATCCTGTTCAGGATCCATCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: RGPVLVHPQDVV*DLPILFRIHLI Trigger: GATCAGATGGATCCTGAACAGGATCGGGAGATCTCAGACCACGTCCTGAGGATGCACCAATACAGGGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS CCA 72 bp | GCGTCAATGGAGGCCACGAAATCCTTCAAGGCCCGCTaGAAGGCAACCAGCTCCTCAAACGCATTGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASMEATKSFKAR*KATSSSNALFR Trigger: CCTGAACAATGCGTTTGAGGAGCTGGTTGCCTTCCAGCGGGCCTTGAAGGATTTCGTGGCCTCCATTGACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS CCA 72 bp | AGAACTCCTCATACTGCTTGGCGTAGGTGGCGTCAATaGAGGCCACGAAATCCTTCAAGGCCCGCTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTPHTAWRRWRQ*RPRNPSRPAGR Trigger: CCTTCCAGCGGGCCTTGAAGGATTTCGTGGCCTCCATTGACGCCACCTACGCCAAGCAGTATGAGGAGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 72 bp | CAGGCTTCACTTTATCCACCAGGTCATCGTCTAGAATaGCATCCACAGAGCGAGGGAGCTGACCAGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QASLYPPGHRLE*HPQSEGADQQG Trigger: CCCCTGCTGGTCAGCTCCCTCGCTCTGTGGATGTCATTCTAGACGATGACCTGGTGGATAAAGTGAAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 72 bp | TCATCTGCTTCACATTACAGGCAATCAGGACGGTCCTaGAGGTCCCCGAGGTGTAGCAGCCCTTCTTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSASHYRQSGRS*RSPRCSSPSSL Trigger: CAGGGAAGAAGGGCTGCTACACCTCGGGGACCTTCAGGACCGTCCTGATTGCCTGTAATGTGAAGCAGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS GCA 72 bp | ACGATGCCCTCAGACACCATGACCTGGTTATCATCCTaGATCCGGCTCAGGCAAGCCTGGATTTCCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TMPSDTMTWLSS*IRLRQAWISSE Trigger: CTCAGAGGAAATCCAGGCTTGCCTGAGCCGGATGCAGGATGATAACCAGGTCATGGTGTCTGAGGGCATCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS CCA 72 bp | CAGATAAGGAAGACGATGCCCTCAGACACCATGACCTaGTTATCATCCTGCATCCGGCTCAGGCAAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QIRKTMPSDTMT*LSSCIRLRQAW Trigger: CCAGGCTTGCCTGAGCCGGATGCAGGATGATAACCAGGTCATGGTGTCTGAGGGCATCGTCTTCCTTATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS TCA 72 bp | GATTCTGTGAGGTGGAGCATGCCCACAGACTGCTCATaGGCTTCCTGGAACACTTCTAAGAGGGCCGCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: DSVRWSMPTDCS*ASWNTSKRAAL Trigger: TAAGGCGGCCCTCTTAGAAGTGTTCCAGGAAGCTCATGAGCAGTCTGTGGGCATGCTCCACCTCACAGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
||
| CDS GCA 72 bp | ATACTGATCATACCTGCCATAGACTGGATTGGCAGCTaGCAAAACACTGCAGCGGGCATTGAGCCGGGCATG | + |
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Preference number: 6 (lower is better) Translates to: ILIIPAIDWIGS*QNTAAGIEPGM Trigger: CATGCCCGGCTCAATGCCCGCTGCAGTGTTTTGGCAGCTGCCAATCCAGTCTATGGCAGGTATGATCAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 72 bp | AAGGCCCGCTGGAAGGCAACCAGCTCCTCAAACGCATaGTTCAGGAGGCGGTTAGCCCTCTTTTCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KARWKATSSSNA*FRRRLALFSFF Trigger: GAAGAATGAAAAGAGGGCTAACCGCCTCCTGAACAATGCGTTTGAGGAGCTGGTTGCCTTCCAGCGGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 72 bp | GGAGTCCTGGGTCTCCTGAGAATCATCGGTCTTCTCTaGGGAATCGTCAGTCTTTGGGGTGTGCACTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GVLGLLRIIGLL*GIVSLWGVHLR Trigger: CCTCAAGTGCACACCCCAAAGACTGACGATTCCCAAGAGAAGACCGATGATTCTCAGGAGACCCAGGACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 90 bp | CACTTTCTGGGAGTCCTGGGTCTCCTGAGAATCATCGGTCTTCTCTaGGGAATCGTCAGTCTTTGGGGTGTGCACTTGAGGCATCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: HFLGVLGLLRIIGLL*GIVSLWGVHLRHLR Trigger: ACGCAGATGCCTCAAGTGCACACCCCAAAGACTGACGATTCCCAAGAGAAGACCGATGATTCTCAGGAGACCCAGGACTCCCAGAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 72 bp | GGTAAAGTCAGGATCGTCTGTGGCCAGGATATCCACTaGACTACCCAATGGCAAAGCATCACCGTCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: GKVRIVCGQDIH*TTQWQSITVLL Trigger: GAGCAGGACGGTGATGCTTTGCCATTGGGTAGTTCAGTGGATATCCTGGCCACAGACGATCCTGACTTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS GCA 72 bp | AGTCTTTGGGGTGTGCACTTGAGGCATCTGCGTCTCTaGTTCACTGAAGTCGTAAGGGTCATAGGACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLWGVHLRHLRL*FTEVVRVIGLS Trigger: GGAGAGTCCTATGACCCTTACGACTTCAGTGAAGCAGAGACGCAGATGCCTCAAGTGCACACCCCAAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | ATCCTATGTAGAACTCCTCATACTGCTTGGCGTAGGTaGCGTCAATGGAGGCCACGAAATCCTTCAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: ILCRTPHTAWRR*RQWRPRNPSRP Trigger: GGGCCTTGAAGGATTTCGTGGCCTCCATTGACGCCACCTACGCCAAGCAGTATGAGGAGTTCTACATAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | ACCTGGTTATCATCCTGCATCCGGCTCAGGCAAGCCTaGATTTCCTCTGAGGAGAACGGCTCTTCTCTATTC | + |
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Preference number: 6 (lower is better) Translates to: TWLSSCIRLRQA*ISSEENGSSLF Trigger: GAATAGAGAAGAGCCGTTCTCCTCAGAGGAAATCCAGGCTTGCCTGAGCCGGATGCAGGATGATAACCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 72 bp | GGGGCTAACGACCGGGCCAGCTGCTCAAAGACATCCTaGGAACGAGTTTTGCTGAACTTCTTGATCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GANDRASCSKTS*ERVLLNFLILA Trigger: AGCCAAGATCAAGAAGTTCAGCAAAACTCGTTCCAAGGATGTCTTTGAGCAGCTGGCCCGGTCGTTAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 90 bp | TGGATGCTCGGGGCTAACGACCGGGCCAGCTGCTCAAAGACATCCTaGGAACGAGTTTTGCTGAACTTCTTGATCTTGGCTATATCGTCC | + |
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Preference number: 6 (lower is better) Translates to: WMLGANDRASCSKTS*ERVLLNFLILAISS Trigger: GGACGATATAGCCAAGATCAAGAAGTTCAGCAAAACTCGTTCCAAGGATGTCTTTGAGCAGCTGGCCCGGTCGTTAGCCCCGAGCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 72 bp | CTGCGCAGGTCATTCACGCTGACAATCAGCCGATACTaGTTGTCACTGATCAGTTCCCGAACCTTGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LRRSFTLTISRY*LSLISSRTLFW Trigger: CCAGAACAAGGTTCGGGAACTGATCAGTGACAATCAGTATCGGCTGATTGTCAGCGTGAATGACCTGCGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 72 bp | CAGCATGATGAAGAGCAGGTCAAATCTAGACAGCAGTaGGTCCTGCAGCCCAATGTTCTCCATGGGCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: QHDEEQVKSRQQ*VLQPNVLHGRL Trigger: AAGACGCCCATGGAGAACATTGGGCTGCAGGACTCACTGCTGTCTAGATTTGACCTGCTCTTCATCATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 72 bp | TCACTGAGTTCCACTTTCTGGGAGTCCTGGGTCTCCTaGGAATCATCGGTCTTCTCTTGGGAATCGTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SLSSTFWESWVS*ESSVFSWESSV Trigger: GACTGACGATTCCCAAGAGAAGACCGATGATTCTCAGGAGACCCAGGACTCCCAGAAAGTGGAACTCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | TGCCTTCCAATCCTATGTAGAACTCCTCATACTGCTTaGCGTAGGTGGCGTCAATGGAGGCCACGAAATCCT | + |
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Preference number: 6 (lower is better) Translates to: CLPILCRTPHTA*RRWRQWRPRNP Trigger: AGGATTTCGTGGCCTCCATTGACGCCACCTACGCCAAGCAGTATGAGGAGTTCTACATAGGATTGGAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | TCACCTATTAGAAGAATATTGATGTCTCCACGGATGTaGCTGCCGTTTTCAAGTTCCCGCTCCACCCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SPIRRILMSPRM*LPFSSSRSTPP Trigger: GGGAGGGGTGGAGCGGGAACTTGAAAACGGCAGCCACATCCGTGGAGACATCAATATTCTTCTAATAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CCA 72 bp | CATGGGCGTCTTATACTGATCATACCTGCCATAGACTaGATTGGCAGCTGCCAAAACACTGCAGCGGGCATT | + |
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Preference number: 6 (lower is better) Translates to: HGRLILIIPAID*IGSCQNTAAGI Trigger: AATGCCCGCTGCAGTGTTTTGGCAGCTGCCAATCCAGTCTATGGCAGGTATGATCAGTATAAGACGCCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 72 bp | ATTTCCTCTGAGGAGAACGGCTCTTCTCTATTCCGGTaGATGGATTCTGTGAGGTGGAGCATGCCCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: ISSEENGSSLFR*MDSVRWSMPTD Trigger: GTCTGTGGGCATGCTCCACCTCACAGAATCCATCAACCGGAATAGAGAAGAGCCGTTCTCCTCAGAGGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 90 bp | GCTAACGACCGGGCCAGCTGCTCAAAGACATCCTTGGAACGAGTTTaGCTGAACTTCTTGATCTTGGCTATATCGTCCGCAGAGAATGCA | + |
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Preference number: 6 (lower is better) Translates to: ANDRASCSKTSLERV*LNFLILAISSAENA Trigger: TGCATTCTCTGCGGACGATATAGCCAAGATCAAGAAGTTCAGCAAAACTCGTTCCAAGGATGTCTTTGAGCAGCTGGCCCGGTCGTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 90 bp | ATCATCGGTCTTCTCTTGGGAATCGTCAGTCTTTGGGGTGTGCACTaGAGGCATCTGCGTCTCTGCTTCACTGAAGTCGTAAGGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: IIGLLLGIVSLWGVH*RHLRLCFTEVVRVI Trigger: TATGACCCTTACGACTTCAGTGAAGCAGAGACGCAGATGCCTCAAGTGCACACCCCAAAGACTGACGATTCCCAAGAGAAGACCGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 72 bp | CATACTCTGTCTCCAGGGGGTTGTTCTCCTCATCCTTaGTGGGATAAACAGAACTGGATGGGAAAGCCACTA | + |
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Preference number: 6 (lower is better) Translates to: HTLSPGGCSPHP*WDKQNWMGKPL Trigger: TAGTGGCTTTCCCATCCAGTTCTGTTTATCCCACAAAGGATGAGGAGAACAACCCCCTGGAGACAGAGTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 72 bp | GACTTGGCAACGGAGGGGTCACCTATTAGAAGAATATaGATGTCTCCACGGATGTGGCTGCCGTTTTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: DLATEGSPIRRI*MSPRMWLPFSS Trigger: ACTTGAAAACGGCAGCCACATCCGTGGAGACATCAATATTCTTCTAATAGGTGACCCCTCCGTTGCCAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 72 bp | ACTTGGCAACGGAGGGGTCACCTATTAGAAGAATATTaGTGTCTCCACGGATGTGGCTGCCGTTTTCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: TWQRRGHLLEEY*CLHGCGCRFQV Trigger: AACTTGAAAACGGCAGCCACATCCGTGGAGACATCAATATTCTTCTAATAGGTGACCCCTCCGTTGCCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 72 bp | TCAAAGACATCCTTGGAACGAGTTTTGCTGAACTTCTaGATCTTGGCTATATCGTCCGCAGAGAATGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SKTSLERVLLNF*ILAISSAENAG Trigger: GCCTGCATTCTCTGCGGACGATATAGCCAAGATCAAGAAGTTCAGCAAAACTCGTTCCAAGGATGTCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS TCA 72 bp | TTGATCTTGGCTATATCGTCCGCAGAGAATGCAGGCTaGATATCCTTACTCATCTGCTTCACATTACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LILAISSAENAG*ISLLICFTLQA Trigger: TGCCTGTAATGTGAAGCAGATGAGTAAGGATATTCAGCCTGCATTCTCTGCGGACGATATAGCCAAGATCAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS GCA 72 bp | GAACTTCTTGATCTTGGCTATATCGTCCGCAGAGAATaGAGGCTGAATATCCTTACTCATCTGCTTCACATT | + |
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Preference number: 6 (lower is better) Translates to: ELLDLGYIVRRE*RLNILTHLLHI Trigger: AATGTGAAGCAGATGAGTAAGGATATTCAGCCTGCATTCTCTGCGGACGATATAGCCAAGATCAAGAAGTTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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| CDS CAA 72 bp | TTTCCTCTTCATCTTCTAGGTCTGATTCATCCTCACTaGCCTTCTTACGTTTCTTCTCCTTCTCCAGAACCT | + |
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Preference number: 6 (lower is better) Translates to: FPLHLLGLIHPH*PSYVSSPSPEP Trigger: AGGTTCTGGAGAAGGAGAAGAAACGTAAGAAGGCAAGTGAGGATGAATCAGACCTAGAAGATGAAGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053266.11 |
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