Pregenerated sensors for MCL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038612Ensembl transcript IDs: ENSMUST00000037947.15, ENSMUST00000178686.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACCACATGCTTCTTCCCTCCAAAGCAGCCCCTTGCCCAGCCACTaGGCTCTCCAAGTCTTCATGGCCCTGGACCTAAAATACCTACTA | + |
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Preference number: 1 (lower is better) Translates to: RPHASSLQSSPLPSH*ALQVFMALDLKYLL Trigger: TAGTAGGTATTTTAGGTCCAGGGCCATGAAGACTTGGAGAGCGCAGTGGCTGGGCAAGGGGCTGCTTTGGAGGGAAGAAGCATGTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR GCA 90 bp | GAAGGATGTGCCTCAACTATTCATCTAGTCAGCACTCAGACCACATaGTTCTTCCCTCCAAAGCAGCCCCTTGCCCAGCCACTGCGCTCT | + |
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Preference number: 1 (lower is better) Translates to: EGCASTIHLVSTQTT*FFPPKQPLAQPLRS Trigger: AGAGCGCAGTGGCTGGGCAAGGGGCTGCTTTGGAGGGAAGAAGCATGTGGTCTGAGTGCTGACTAGATGAATAGTTGAGGCACATCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR TCA 90 bp | GATTTTGCTGAGAGCCATCTTTCCAAGCAGCCCCTCCCTCTTCTCTaGAGGATGTGCCTCAACTATTCATCTAGTCAGCACTCAGACCAC | + |
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Preference number: 1 (lower is better) Translates to: DFAESHLSKQPLPLL*RMCLNYSSSQHSDH Trigger: GTGGTCTGAGTGCTGACTAGATGAATAGTTGAGGCACATCCTTCAGAGAAGAGGGAGGGGCTGCTTGGAAAGATGGCTCTCAGCAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR CCA 90 bp | CTGAAGCTTTCAAATGACCCTAGCTTAAATACCTTCAGTTACCAGTaGCTTTTGTTAACCGAGTTTAGCAAAACCCAGTGTTTCTCTAAA | + |
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Preference number: 1 (lower is better) Translates to: LKLSNDPSLNTFSYQ*LLLTEFSKTQCFSK Trigger: TTTAGAGAAACACTGGGTTTTGCTAAACTCGGTTAACAAAAGCCACTGGTAACTGAAGGTATTTAAGCTAGGGTCATTTGAAAGCTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR-3UTR TCA 90 bp | AAAGTCCTGAGCACTTGGGACTTTGTCAAGCACACCCTGGACTGCTCAGAGGCCGCTTCATTCAGACAGTaGCTCTTCCAGGGGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: KVLSTWDFVKHTLDCSEAASFRQ*LFQGEH Trigger: GTGCTCCCCCTGGAAGAGTCACTGTCTGAATGAAGC...GGCCTCTGAGCAGTCCAGGGTGTGCTTGACAAAGTCCCAAGTGCTCAGGACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR-3UTR TCA 90 bp | ACTTCAGCTTTCATTTCACCCTTTGTGAGCTGGGAAGTCAGGCTCCTAGTAAACAGTGTTCCTATCCTCTaGCAGGAAAGCTGTGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: TSAFISPFVSWEVRLLVNSVPIL*QESCAD Trigger: GTCAGCACAGCTTTCCTGTCAGAGGATAGGAACACT...GTTTACTAGGAGCCTGACTTCCCAGCTCACAAAGGGTGAAATGAAAGCTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR-3UTR GCA 90 bp | AACTGGGAGCATAACACGCCAACAGTAAAGGAAGTAAAGGCTACACCTAGAGACGCTGAGAGGGAACTTTaGTTCATTCAGACAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: NWEHNTPTVKEVKATPRDAEREL*FIQTVT Trigger: AGTCACTGTCTGAATGAAGCAAAGTTCCCTCTCAGC...GTCTCTAGGTGTAGCCTTTACTTCCTTTACTGTTGGCGTGTTATGCTCCCAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR-3UTR CCA 90 bp | CAACACTCTGAGCAGAGTAATGGATATTTATTGAGCTTTGTGACTAGCCTGATGGGACTGTTAAAATCCTaGGCAGCTTCAAGTCCACCT | + |
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Preference number: 2 (lower is better) Translates to: QHSEQSNGYLLSFVTSLMGLLKS*AASSPP Trigger: AGGTGGACTTGAAGCTGCCCAGGATTTTAACAGTCC...CATCAGGCTAGTCACAAAGCTCAATAAATATCCATTACTCTGCTCAGAGTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCAGGGCACTTCTTCCCTATTACATTCTTAGTCATTTGATTCCTGCCTATTTCTTTTTGCTATGTTaGTACAGTAGAACTGGACTG | + |
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Preference number: 2 (lower is better) Translates to: AGRALLPYYILSHLIPAYFFLLC*YSRTGL Trigger: CAGTCCAGTTCTACTGTAGCAACATAGCAAAAAGAA...ATAGGCAGGAATCAAATGACTAAGAATGTAATAGGGAAGAAGTGCCCTGCCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR GCA 72 bp | TCAGACCACATGCTTCTTCCCTCCAAAGCAGCCCCTTaGCCAGCCACTGCGCTCTCCAAGTCTTCATGGCCC | + |
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Preference number: 3 (lower is better) Translates to: SDHMLLPSKAAP*PATALSKSSWP Trigger: GGGCCATGAAGACTTGGAGAGCGCAGTGGCTGGGCAAGGGGCTGCTTTGGAGGGAAGAAGCATGTGGTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR GCA 72 bp | CTGAGCACTTGGGACTTTGTCAAGCACACCCTGGACTaGTCAGAGGCCTCCCTTCACATTCCTGTACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: LSTWDFVKHTLD*SEASLHIPVQH Trigger: GTGCTGTACAGGAATGTGAAGGGAGGCCTCTGAGCAGTCCAGGGTGTGCTTGACAAAGTCCCAAGTGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR GCA 72 bp | GCCTCAACTATTCATCTAGTCAGCACTCAGACCACATaGTTCTTCCCTCCAAAGCAGCCCCTTGCCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: ASTIHLVSTQTT*FFPPKQPLAQP Trigger: TGGCTGGGCAAGGGGCTGCTTTGGAGGGAAGAAGCATGTGGTCTGAGTGCTGACTAGATGAATAGTTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR GCA 72 bp | CTCCATGGCCTCTCAGTGTTTGCTGAGAGGGAACTTTaGTTCATTCAGACAGTGACTCTTCCAGGGGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: LHGLSVFAEREL*FIQTVTLPGGA Trigger: TGCTCCCCCTGGAAGAGTCACTGTCTGAATGAAGCAAAGTTCCCTCTCAGCAAACACTGAGAGGCCATGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR CCA 72 bp | CAATGGAAAGCATGCCAATCCAAGAATGCCAATCCCTaGTCACTGTCGGTCACGGGGCTCAAAGAGCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: QWKACQSKNANP*SLSVTGLKEQV Trigger: CACTTGCTCTTTGAGCCCCGTGACCGACAGTGACCAGGGATTGGCATTCTTGGATTGGCATGCTTTCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR-3UTR CAA 90 bp | AACTGGGAGCATAACACGCCAACAGTAAAGGAAGTAAAGGCTACACCTAGAGACATGGCCTCTCAGTGTTaGCTGAGAGGGAACTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: NWEHNTPTVKEVKATPRDMASQC*LRGNFA Trigger: AGCAAAGTTCCCTCTCAGCAAACACTGAGAGGCCAT...GTCTCTAGGTGTAGCCTTTACTTCCTTTACTGTTGGCGTGTTATGCTCCCAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR-3UTR CAA 90 bp | AGAATGCCAATCCCTGGTCACTGTCGGTCACGGGGCTCAAAGAGCAAGTGTTCCAGTAATGGATATTTATaGAGCTTTGTGACTAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: RMPIPGHCRSRGSKSKCSSNGYL*SFVTSL Trigger: CAGGCTAGTCACAAAGCTCAATAAATATCCATTACT...GGAACACTTGCTCTTTGAGCCCCGTGACCGACAGTGACCAGGGATTGGCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR TCA 72 bp | AGGCTCCTAGTAAACAAAACTTCCATGGCTGGGTTATaGGAGGCTAACCTTTTAGTCACCTCAACCTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: RLLVNKTSMAGL*EANLLVTSTSR Trigger: CCTAGAGGTTGAGGTGACTAAAAGGTTAGCCTCTCATAACCCAGCCATGGAAGTTTTGTTTACTAGGAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCAGGGCACTTCTTCCCTATTACATTCTTAGTCATTTGATTCCTGCCTATCACAAGTCACCAACGTaGTTAATTAGGGCTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: AGRALLPYYILSHLIPAYHKSPT*LIRASL Trigger: GAGAGAAGCCCTAATTAACAACGTTGGTGACTTGTG...ATAGGCAGGAATCAAATGACTAAGAATGTAATAGGGAAGAAGTGCCCTGCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR CCA 72 bp | GTCTGTACTTCAGCTTTCATTTCACCCTTTGTGAGCTaGGAAGTCAGGCTCCTAGTAAACAAAACTTCCATG | + |
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Preference number: 3 (lower is better) Translates to: VCTSAFISPFVS*EVRLLVNKTSM Trigger: CATGGAAGTTTTGTTTACTAGGAGCCTGACTTCCCAGCTCACAAAGGGTGAAATGAAAGCTGAAGTACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCAGGGCACTTCTTCCCTATTACATTCTTAGTCATTTGATTCCTGCCTATAGTTACCAGTGGCTTTaGTTAACCGAGTTTAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: AGRALLPYYILSHLIPAYSYQWL*LTEFSK Trigger: TTTGCTAAACTCGGTTAACAAAAGCCACTGGTAACT...ATAGGCAGGAATCAAATGACTAAGAATGTAATAGGGAAGAAGTGCCCTGCCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR TCA 72 bp | TCCTGTACAGCACTGCAGCTTCTAGTCATCGTTTGGTaGCTTGTAGGTTACAAATCCATTTTACACAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: SCTALQLLVIVW*LVGYKSILHKS Trigger: TGACTTGTGTAAAATGGATTTGTAACCTACAAGTCACCAAACGATGACTAGAAGCTGCAGTGCTGTACAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR TCA 72 bp | GAGTTTAGCAAAACCCAGTGTTTCTCTAAACTTAAGTaGACACAGTCATACTTGGAGCAAACTAATAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: EFSKTQCFSKLK*TQSYLEQTNKS Trigger: ACTTTTATTAGTTTGCTCCAAGTATGACTGTGTTCACTTAAGTTTAGAGAAACACTGGGTTTTGCTAAACTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR GCA 90 bp | AGAATGCCAATCCCTGGTCACTGTCGGTCACGGGGCTCAAAGAGCAAGTGTTCCAGGCCGTCTCGTGGTTaGGCTGCACGCCGTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RMPIPGHCRSRGSKSKCSRPSRG*AARRRP Trigger: TGGGCGACGGCGTGCAGCGCAACCACGAGACGGCCT...GGAACACTTGCTCTTTGAGCCCCGTGACCGACAGTGACCAGGGATTGGCATTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| 3UTR CAA 72 bp | CTCAGACCACATGCTTCTTCCCTCCAAAGCAGCCCCTaGCCCAGCCACTGCGCTCTCCAAGTCTTCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: LRPHASSLQSSP*PSHCALQVFMA Trigger: GGCCATGAAGACTTGGAGAGCGCAGTGGCTGGGCAAGGGGCTGCTTTGGAGGGAAGAAGCATGTGGTCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CCA 90 bp | AACTGGGAGCATAACACGCCAACAGTAAAGGAAGTAAAGGCTACACCTAGAGACCGGCCCCGGAGCTCTTaGCCGCCTCGCTCACGCGCT | + |
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Preference number: 4 (lower is better) Translates to: NWEHNTPTVKEVKATPRDRPRSS*PPRSRA Trigger: AGCGCGTGAGCGAGGCGGCCAAGAGCTCCGGGGCCG...GTCTCTAGGTGTAGCCTTTACTTCCTTTACTGTTGGCGTGTTATGCTCCCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CCA 90 bp | AAAGTCCTGAGCACTTGGGACTTTGTCAAGCACACCCTGGACTGCTCAGAGGCCTTCCGGAGCATGCCCTaGAAGGCCGTCTCGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KVLSTWDFVKHTLDCSEAFRSMP*KAVSWL Trigger: CAACCACGAGACGGCCTTCCAGGGCATGCTCCGGAA...GGCCTCTGAGCAGTCCAGGGTGTGCTTGACAAAGTCCCAAGTGCTCAGGACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR GCA 90 bp | CATCCACCCCTTTCATTCATTCTAGAAGTCCTTCTCCATGGCCTCTCAGTGTTTGTCTCGTGGTTGCGCTaGACGCCGTCGCCCACGCGC | + |
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Preference number: 4 (lower is better) Translates to: HPPLSFILEVLLHGLSVFVSWLR*TPSPTR Trigger: GCGCGTGGGCGACGGCGTGCAGCGCAACCACGAGAC...AAACACTGAGAGGCCATGGAGAAGGACTTCTAGAATGAATGAAAGGGGTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR TCA 90 bp | AAAGTCCTGAGCACTTGGGACTTTGTCAAGCACACCCTGGACTGCTCAGAGGCCCCCAGCCTCTTTGTTTaGCAAGCCAGTCCCGTTTCG | + |
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Preference number: 4 (lower is better) Translates to: KVLSTWDFVKHTLDCSEAPSLFV*QASPVS Trigger: CGAAACGGGACTGGCTTGTCAAACAAAGAGGCTGGG...GGCCTCTGAGCAGTCCAGGGTGTGCTTGACAAAGTCCCAAGTGCTCAGGACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CCA 90 bp | TCCAAGAATGCCAATCCCTGGTCACTGTCGGTCACGGGGCTCAAAGAGCAAGTGCGCTCTTTAAGTGTTTaGCCACAAAGGCACCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SKNANPWSLSVTGLKEQVRSLSV*PQRHRK Trigger: CTTTCGGTGCCTTTGTGGCCAAACACTTAAAGAGCG...CACTTGCTCTTTGAGCCCCGTGACCGACAGTGACCAGGGATTGGCATTCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CCA 90 bp | AAAGTCCTGAGCACTTGGGACTTTGTCAAGCACACCCTGGACTGCTCAGAGGCCTCTAGGTCCTGTACGTaGAAGAACTCCACAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: KVLSTWDFVKHTLDCSEASRSCT*KNSTNP Trigger: TGGGTTTGTGGAGTTCTTCCACGTACAGGACCTAGA...GGCCTCTGAGCAGTCCAGGGTGTGCTTGACAAAGTCCCAAGTGCTCAGGACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR TCA 90 bp | GCAGGCAGGGCACTTCTTCCCTATTACATTCTTAGTCATTTGATTCCTGCCTATGCAAGTAGCGCGAGATaGTCTCCAGCGACTGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: AGRALLPYYILSHLIPAYASSAR*SPATGG Trigger: ACCGCCAGTCGCTGGAGATCATCTCGCGCTACTTGC...ATAGGCAGGAATCAAATGACTAAGAATGTAATAGGGAAGAAGTGCCCTGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR TCA 90 bp | TCCAAGAATGCCAATCCCTGGTCACTGTCGGTCACGGGGCTCAAAGAGCAAGTGCTGCTAATGGTTCGATaGAGCTTTCTTGGTTTACGC | + |
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Preference number: 4 (lower is better) Translates to: SKNANPWSLSVTGLKEQVLLMVR*SFLGLR Trigger: GCGTAAACCAAGAAAGCTTCATCGAACCATTAGCAG...CACTTGCTCTTTGAGCCCCGTGACCGACAGTGACCAGGGATTGGCATTCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CCA 90 bp | CAACACTCTGAGCAGAGTAATGGATATTTATTGAGCTTTGTGACTAGCCTGATGTGGAAGGCCGTCTCGTaGTTGCGCTGCACGCCGTCG | + |
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Preference number: 4 (lower is better) Translates to: QHSEQSNGYLLSFVTSLMWKAVS*LRCTPS Trigger: CGACGGCGTGCAGCGCAACCACGAGACGGCCTTCCA...CATCAGGCTAGTCACAAAGCTCAATAAATATCCATTACTCTGCTCAGAGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CCA 90 bp | AAAGTCCTGAGCACTTGGGACTTTGTCAAGCACACCCTGGACTGCTCAGAGGCCTCGATGAAGCTTTCTTaGTTTACGCTCTTTAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: KVLSTWDFVKHTLDCSEASMKLS*FTLFKC Trigger: ACACTTAAAGAGCGTAAACCAAGAAAGCTTCATCGA...GGCCTCTGAGCAGTCCAGGGTGTGCTTGACAAAGTCCCAAGTGCTCAGGACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CCA 90 bp | AACTGGACTGTTAAAATCCTGGGCAGCTTCAAGTCCACCTTCATAAATACACATATGATCTCCAGCGACTaGCGGTATAGGTCGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: NWTVKILGSFKSTFINTHMISSD*RYRSSS Trigger: AGAGGACGACCTATACCGCCAGTCGCTGGAGATCAT...ATGTGTATTTATGAAGGTGGACTTGAAGCTGCCCAGGATTTTAACAGTCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS TCA 90 bp | CGAGGAGGCCGGGCGACTTATGCAGCCGCCTTTCGGCCGACGCGGTaGCGTCGGGGTCCTCGGCGCCCACGGGCGGCGGCCGGGCGACCA | + |
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Preference number: 5 (lower is better) Translates to: RGGRATYAAAFRPTR*RRGPRRPRAAAGRP Trigger: TGGTCGCCCGGCCGCCGCCCGTGGGCGCCGAGGACCCCGACGTCACCGCGTCGGCCGAAAGGCGGCTGCATAAGTCGCCCGGCCTCCTCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS GCA 90 bp | GCGGCCATCTCCTCGGGCGGCACGGCGAGGAGGCCGGGCGACTTATaGAGCCGCCTTTCGGCCGACGCGGTGACGTCGGGGTCCTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: AAISSGGTARRPGDL*SRLSADAVTSGSSA Trigger: CGCCGAGGACCCCGACGTCACCGCGTCGGCCGAAAGGCGGCTGCATAAGTCGCCCGGCCTCCTCGCCGTGCCGCCCGAGGAGATGGCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CCA 90 bp | TGGCCTCCGGCTCGCAGCCGTCCAGTTCCTCCTCCGGAGACACGATaGCGGCGGCGGCCGACGCGGCCATCTCCTCGGGCGGCACGGCGA | + |
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Preference number: 5 (lower is better) Translates to: WPPARSRPVPPPETR*RRRPTRPSPRAARR Trigger: TCGCCGTGCCGCCCGAGGAGATGGCCGCGTCGGCCGCCGCCGCCATCGTGTCTCCGGAGGAGGAACTGGACGGCTGCGAGCCGGAGGCCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS TCA 90 bp | TCGAGTCCTTGGAGCCGGTCGCCTGCTCCCGCAAGTAGCGCGAGATaGTCTCCAGCGACTGGCGGTATAGGTCGTCCTCTTCCTCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: SSPWSRSPAPASSAR*SPATGGIGRPLPPR Trigger: CCGAGGAGGAAGAGGACGACCTATACCGCCAGTCGCTGGAGATCATCTCGCGCTACTTGCGGGAGCAGGCGACCGGCTCCAAGGACTCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS-3UTR CAA 90 bp | AAAGTCCTGAGCACTTGGGACTTTGTCAAGCACACCCTGGACTGCTCAGAGGCCAAGGCCGTCTCGTGGTaGCGCTGCACGCCGTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: KVLSTWDFVKHTLDCSEAKAVSW*RCTPSP Trigger: GGGCGACGGCGTGCAGCGCAACCACGAGACGGCCTT...GGCCTCTGAGCAGTCCAGGGTGTGCTTGACAAAGTCCCAAGTGCTCAGGACTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CAA 90 bp | CATCCACCCCTTTCATTCATTCTAGAAGTCCTTCTCCATGGCCTCTCAGTGTTTCCCATCCCAGCCTCTTaGTTTGACAAGCCAGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: HPPLSFILEVLLHGLSVFPIPAS*FDKPVP Trigger: CGGGACTGGCTTGTCAAACAAAGAGGCTGGGATGGG...AAACACTGAGAGGCCATGGAGAAGGACTTCTAGAATGAATGAAAGGGGTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CAA 90 bp | AACTGGGAGCATAACACGCCAACAGTAAAGGAAGTAAAGGCTACACCTAGAGACTCCCAGCCTCTTTGTTaGACAAGCCAGTCCCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: NWEHNTPTVKEVKATPRDSQPLC*TSQSRF Trigger: GAAACGGGACTGGCTTGTCAAACAAAGAGGCTGGGA...GTCTCTAGGTGTAGCCTTTACTTCCTTTACTGTTGGCGTGTTATGCTCCCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CAA 90 bp | CATCCACCCCTTTCATTCATTCTAGAAGTCCTTCTCCATGGCCTCTCAGTGTTTACGCTCTTTAAGTGTTaGGCCACAAAGGCACCGAAA | + |
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Preference number: 5 (lower is better) Translates to: HPPLSFILEVLLHGLSVFTLFKC*ATKAPK Trigger: TTTCGGTGCCTTTGTGGCCAAACACTTAAAGAGCGT...AAACACTGAGAGGCCATGGAGAAGGACTTCTAGAATGAATGAAAGGGGTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS-3UTR CAA 90 bp | AACTGGGAGCATAACACGCCAACAGTAAAGGAAGTAAAGGCTACACCTAGAGACTTTGTTACGCCATCTTaGAAAACATGGACCATTACT | + |
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Preference number: 5 (lower is better) Translates to: NWEHNTPTVKEVKATPRDFVTPS*KTWTIT Trigger: AGTAATGGTCCATGTTTTCAAAGATGGCGTAACAAA...GTCTCTAGGTGTAGCCTTTACTTCCTTTACTGTTGGCGTGTTATGCTCCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037947.15 |
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| CDS CCA 90 bp | AGAACATCTGTGATAGTTTCTGCTAATGGTTCGATGAAGCTTTCTTaGTTTACGCTCTTTAAGTGTTTGGCCACAAAGGCACCGAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: RTSVIVSANGSMKLS*FTLFKCLATKAPKE Trigger: TTCTTTCGGTGCCTTTGTGGCCAAACACTTAAAGAGCGTAAACCAAGAAAGCTTCATCGAACCATTAGCAGAAACTATCACAGATGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CAA 90 bp | GGCGGCGGCGGCGTGGAGGGCAGAGAGCCGTCGGCCCCGGAGCTCTaGGCCGCCTCGCTCACGCGCTCCAGGAGGGGCAGCACGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: GGGGVEGREPSAPEL*AASLTRSRRGSTAG Trigger: CCCGGCCGTGCTGCCCCTCCTGGAGCGCGTGAGCGAGGCGGCCAAGAGCTCCGGGGCCGACGGCTCTCTGCCCTCCACGCCGCCGCCGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CAA 72 bp | GGCGTGGAGGGCAGAGAGCCGTCGGCCCCGGAGCTCTaGGCCGCCTCGCTCACGCGCTCCAGGAGGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GVEGREPSAPEL*AASLTRSRRGS Trigger: GCTGCCCCTCCTGGAGCGCGTGAGCGAGGCGGCCAAGAGCTCCGGGGCCGACGGCTCTCTGCCCTCCACGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS GCA 72 bp | TCCTCGGGCGGCACGGCGAGGAGGCCGGGCGACTTATaGAGCCGCCTTTCGGCCGACGCGGTGACGTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: SSGGTARRPGDL*SRLSADAVTSG Trigger: CCCCGACGTCACCGCGTCGGCCGAAAGGCGGCTGCATAAGTCGCCCGGCCTCCTCGCCGTGCCGCCCGAGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CCA 72 bp | GCTCGCAGCCGTCCAGTTCCTCCTCCGGAGACACGATaGCGGCGGCGGCCGACGCGGCCATCTCCTCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: ARSRPVPPPETR*RRRPTRPSPRA Trigger: CGCCCGAGGAGATGGCCGCGTCGGCCGCCGCCGCCATCGTGTCTCCGGAGGAGGAACTGGACGGCTGCGAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CCA 72 bp | GCTCCAGGAGGGGCAGCACGGCCGGGCGCTTGCCGATaGCCTCCGGCTCGCAGCCGTCCAGTTCCTCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: APGGAARPGACR*PPARSRPVPPP Trigger: CGGAGGAGGAACTGGACGGCTGCGAGCCGGAGGCCATCGGCAAGCGCCCGGCCGTGCTGCCCCTCCTGGAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS GCA 72 bp | TCACGCGCTCCAGGAGGGGCAGCACGGCCGGGCGCTTaGCGATGGCCTCCGGCTCGCAGCCGTCCAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SRAPGGAARPGA*RWPPARSRPVP Trigger: AGGAACTGGACGGCTGCGAGCCGGAGGCCATCGGCAAGCGCCCGGCCGTGCTGCCCCTCCTGGAGCGCGTGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CCA 72 bp | CCGCCGCGCCCGCCTCGCCCAGAGGCTTCGAGTCCTTaGAGCCGGTCGCCTGCTCCCGCAAGTAGCGCGAGA | + |
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Preference number: 6 (lower is better) Translates to: PPRPPRPEASSP*SRSPAPASSAR Trigger: TCTCGCGCTACTTGCGGGAGCAGGCGACCGGCTCCAAGGACTCGAAGCCTCTGGGCGAGGCGGGCGCGGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS GCA 72 bp | GTTTCCGGAGCATGCCCTGGAAGGCCGTCTCGTGGTTaGGCTGCACGCCGTCGCCCACGCGCCGCAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VSGACPGRPSRG*AARRRPRAAGS Trigger: AGACCCTGCGGCGCGTGGGCGACGGCGTGCAGCGCAACCACGAGACGGCCTTCCAGGGCATGCTCCGGAAAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CCA 72 bp | TCCAGTTTCCGGAGCATGCCCTGGAAGGCCGTCTCGTaGTTGCGCTGCACGCCGTCGCCCACGCGCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSFRSMPWKAVS*LRCTPSPTRRR Trigger: CCTGCGGCGCGTGGGCGACGGCGTGCAGCGCAACCACGAGACGGCCTTCCAGGGCATGCTCCGGAAACTGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CAA 72 bp | AGTTTCCGGAGCATGCCCTGGAAGGCCGTCTCGTGGTaGCGCTGCACGCCGTCGCCCACGCGCCGCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SFRSMPWKAVSW*RCTPSPTRRRV Trigger: GACCCTGCGGCGCGTGGGCGACGGCGTGCAGCGCAACCACGAGACGGCCTTCCAGGGCATGCTCCGGAAACT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CAA 90 bp | TTAATGTCCAGTTTCCGGAGCATGCCCTGGAAGGCCGTCTCGTGGTaGCGCTGCACGCCGTCGCCCACGCGCCGCAGGGTCTCCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: LMSSFRSMPWKAVSW*RCTPSPTRRRVSSA Trigger: AGCGCTGGAGACCCTGCGGCGCGTGGGCGACGGCGTGCAGCGCAACCACGAGACGGCCTTCCAGGGCATGCTCCGGAAACTGGACATTAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS TCA 72 bp | TGGAGCCGGTCGCCTGCTCCCGCAAGTAGCGCGAGATaGTCTCCAGCGACTGGCGGTATAGGTCGTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: WSRSPAPASSAR*SPATGGIGRPL Trigger: AAGAGGACGACCTATACCGCCAGTCGCTGGAGATCATCTCGCGCTACTTGCGGGAGCAGGCGACCGGCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CAA 90 bp | GCTAATGGTTCGATGAAGCTTTCTTGGTTTACGCTCTTTAAGTGTTaGGCCACAAAGGCACCGAAAGAAATAAGAGTCACAATCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: ANGSMKLSWFTLFKC*ATKAPKEIRVTILP Trigger: GGGCAGGATTGTGACTCTTATTTCTTTCGGTGCCTTTGTGGCCAAACACTTAAAGAGCGTAAACCAAGAAAGCTTCATCGAACCATTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CCA 72 bp | GTGATAGTTTCTGCTAATGGTTCGATGAAGCTTTCTTaGTTTACGCTCTTTAAGTGTTTGGCCACAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: VIVSANGSMKLS*FTLFKCLATKA Trigger: TGCCTTTGTGGCCAAACACTTAAAGAGCGTAAACCAAGAAAGCTTCATCGAACCATTAGCAGAAACTATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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| CDS CAA 72 bp | TCGATGAAGCTTTCTTGGTTTACGCTCTTTAAGTGTTaGGCCACAAAGGCACCGAAAGAAATAAGAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: SMKLSWFTLFKC*ATKAPKEIRVT Trigger: TGTGACTCTTATTTCTTTCGGTGCCTTTGTGGCCAAACACTTAAAGAGCGTAAACCAAGAAAGCTTCATCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037947.15 ENSMUST00000178686.2 |
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