Pregenerated sensors for MCIDAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074651Ensembl transcript IDs: ENSMUST00000092089.6
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACACCCCCACCCCAGGACTGGAGTTTCTTTCCCATTTGAGCCATTaGTATGGATGCTGGCTGGGTTCTGAAGTCCAAGCCCTCTCCAAA | + |
|
Preference number: 1 (lower is better) Translates to: HTPTPGLEFLSHLSH*YGCWLGSEVQALSK Trigger: TTTGGAGAGGGCTTGGACTTCAGAACCCAGCCAGCATCCATATCAATGGCTCAAATGGGAAAGAAACTCCAGTCCTGGGGTGGGGGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR TCA 90 bp | CAGATAACCACACCCCCACCCCAGGACTGGAGTTTCTTTCCCATTTaGGCCATTGATATGGATGCTGGCTGGGTTCTGAAGTCCAAGCCC | + |
|
Preference number: 1 (lower is better) Translates to: QITTPPPQDWSFFPI*AIDMDAGWVLKSKP Trigger: GGGCTTGGACTTCAGAACCCAGCCAGCATCCATATCAATGGCTCAAATGGGAAAGAAACTCCAGTCCTGGGGTGGGGGTGTGGTTATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR TCA 90 bp | GTTTCTTTCCCATTTGAGCCATTGATATGGATGCTGGCTGGGTTCTaGAGTCCAAGCCCTCTCCAAAAGCAGCAAGCACGCAAACCAACT | + |
|
Preference number: 1 (lower is better) Translates to: VSFPFEPLIWMLAGF*SPSPLQKQQARKPT Trigger: AGTTGGTTTGCGTGCTTGCTGCTTTTGGAGAGGGCTTGGACTTCAGAACCCAGCCAGCATCCATATCAATGGCTCAAATGGGAAAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR CCA 90 bp | CAGTCAAATATGGCGGTGAGCACCTCTAACCCAGCACTCAGGAGATaGAAGCAGAAGGAAACAGAAGCAATCATAATAGCAAGTCTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: QSNMAVSTSNPALRR*KQKETEAIIIASLC Trigger: ACACAGACTTGCTATTATGATTGCTTCTGTTTCCTTCTGCTTCCATCTCCTGAGTGCTGGGTTAGAGGTGCTCACCGCCATATTTGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR GCA 90 bp | AATTCTGGGAACCAGATGTGGGAAACATTTCTAGCTATGCCCACTTaGTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTA | + |
|
Preference number: 1 (lower is better) Translates to: NSGNQMWETFLAMPT*LQTLLSAVTQGSIL Trigger: TAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAGCTAGAAATGTTTCCCACATCTGGTTCCCAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR-3UTR GCA 90 bp | GCGGTGAGCACCTCTAACCCAGCACTCAGGAGATGGAAGCAGAAGGAAACAGAATCCAGCTGCTCTATGTaGCTCCTGGACCTGCCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: AVSTSNPALRRWKQKETESSCSM*LLDLPQ Trigger: TTGAGGCAGGTCCAGGAGGCACATAGAGCAGCTGGA...TTCTGTTTCCTTCTGCTTCCATCTCCTGAGTGCTGGGTTAGAGGTGCTCACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGTCCAGCTGCTCTATGTGCCTCCTGGACCTGCCTCAAACAAACAAAGCGCTCTGGGAACCAGATGTaGGAAACATTTCTAGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: LCPAALCASWTCLKQTKRSGNQM*ETFLAM Trigger: CATAGCTAGAAATGTTTCCCACATCTGGTTCCCAGA...GCGCTTTGTTTGTTTGAGGCAGGTCCAGGAGGCACATAGAGCAGCTGGACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR CAA 90 bp | TCTGGGAACCAGATGTGGGAAACATTTCTAGCTATGCCCACTTGCTaGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SGNQMWETFLAMPTC*QTLLSAVTQGSILG Trigger: CCCTAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAGCTAGAAATGTTTCCCACATCTGGTTCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR-3UTR CCA 90 bp | ATGATGTCAGATAACCACACCCCCACCCCAGGACTGGAGTTTCTTTCCCATTTGCCAGCACTCAGGAGATaGAAGCAGAAGGAAACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: MMSDNHTPTPGLEFLSHLPALRR*KQKETE Trigger: TTCTGTTTCCTTCTGCTTCCATCTCCTGAGTGCTGG...CAAATGGGAAAGAAACTCCAGTCCTGGGGTGGGGGTGTGGTTATCTGACATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR CAA 90 bp | GAATTCTGGGAACCAGATGTGGGAAACATTTCTAGCTATGCCCACTaGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: EFWEPDVGNISSYAH*LADASLCCYTGQYF Trigger: AAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAGCTAGAAATGTTTCCCACATCTGGTTCCCAGAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR-3UTR GCA 90 bp | ATATGGGGCTTCGGAGCAGAACTTTTCATTGCACAGGTACCAAGACACTTCTGTCGAGTAGCGTTTGCTTaGAGAGAATTCTGGGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: IWGFGAELFIAQVPRHFCRVAFA*REFWEP Trigger: TGGTTCCCAGAATTCTCTGCAAGCAAACGCTACTCG...ACAGAAGTGTCTTGGTACCTGTGCAATGAAAAGTTCTGCTCCGAAGCCCCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGTAAAGAATTTTACTTATGTGACTGTGCCTGTGCGTGTGTGTGTGTGTGTCAGAGGGGAATTGGGTaGTGTGCCAAAACACCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: FCKEFYLCDCACACVCVCQRGIG*CAKTPR Trigger: TCTGGGTGTTTTGGCACATCACCCAATTCCCCTCTG...ACACACACACACACACGCACAGGCACAGTCACATAAGTAAAATTCTTTACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR-3UTR GCA 90 bp | TTTTGTAAAGAATTTTACTTATGTGACTGTGCCTGTGCGTGTGTGTGTGTGTGTAAGACAGGGTTTCTCTaGATAGCTTTGGCTGTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FCKEFYLCDCACACVCVCKTGFL*IALAVL Trigger: CAGGACAGCCAAAGCTATGCAGAGAAACCCTGTCTT...ACACACACACACACACGCACAGGCACAGTCACATAAGTAAAATTCTTTACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR CAA 90 bp | TGTTTAGCACCTATCCTGCATCAGCATTTGCCTAATTGTGTAGCTTaGCTTGGTTTTGTTTCTTTGCTATTTAAGACAGGGTTTCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: CLAPILHQHLPNCVA*LGFVSLLFKTGFLC Trigger: GCAGAGAAACCCTGTCTTAAATAGCAAAGAAACAAAACCAAGCAAAGCTACACAATTAGGCAAATGCTGATGCAGGATAGGTGCTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR TCA 72 bp | CGGAGTATACAGATGCCCACAGAAACCAGAAGAGGATaGTGTCAGATAACCACACCCCCACCCCAGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RSIQMPTETRRG*CQITTPPPQDW Trigger: CCAGTCCTGGGGTGGGGGTGTGGTTATCTGACATCATCCTCTTCTGGTTTCTGTGGGCATCTGTATACTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR-3UTR CAA 90 bp | GCGGTGAGCACCTCTAACCCAGCACTCAGGAGATGGAAGCAGAAGGAAACAGAATCTAGCTATGCCCACTaGCTTGCAGACGCTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AVSTSNPALRRWKQKETESSYAH*LADASL Trigger: GAGAGAAGCGTCTGCAAGCAAGTGGGCATAGCTAGA...TTCTGTTTCCTTCTGCTTCCATCTCCTGAGTGCTGGGTTAGAGGTGCTCACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR TCA 72 bp | CCATTTGAGCCATTGATATGGATGCTGGCTGGGTTCTaGAGTCCAAGCCCTCTCCAAAAGCAGCAAGCACGC | + |
|
Preference number: 3 (lower is better) Translates to: PFEPLIWMLAGF*SPSPLQKQQAR Trigger: GCGTGCTTGCTGCTTTTGGAGAGGGCTTGGACTTCAGAACCCAGCCAGCATCCATATCAATGGCTCAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR TCA 72 bp | ACACCCCCACCCCAGGACTGGAGTTTCTTTCCCATTTaGGCCATTGATATGGATGCTGGCTGGGTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TPPPQDWSFFPI*AIDMDAGWVLK Trigger: CTTCAGAACCCAGCCAGCATCCATATCAATGGCTCAAATGGGAAAGAAACTCCAGTCCTGGGGTGGGGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR GCA 72 bp | CCGCAGGTGTGCGTGTGTATACACGCAATTTCACCGTaGAAAAGCAAGCAGTATATGGGGCTTCGGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PQVCVCIHAISP*KSKQYMGLRSR Trigger: TCTGCTCCGAAGCCCCATATACTGCTTGCTTTTGCACGGTGAAATTGCGTGTATACACACGCACACCTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR TCA 72 bp | ACCCCAGGACTGGAGTTTCTTTCCCATTTGAGCCATTaGTATGGATGCTGGCTGGGTTCTGAAGTCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TPGLEFLSHLSH*YGCWLGSEVQA Trigger: GGCTTGGACTTCAGAACCCAGCCAGCATCCATATCAATGGCTCAAATGGGAAAGAAACTCCAGTCCTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR GCA 72 bp | TCTAGCTATGCCCACTTGCTTGCAGACGCTTCTCTCTaGTGTTACACAGGGCAGTATTTTAGGGGAAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SSYAHLLADASL*CYTGQYFRGSH Trigger: GTGGCTTCCCCTAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAGCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR GCA 72 bp | AACCAGATGTGGGAAACATTTCTAGCTATGCCCACTTaGTTGCAGACGCTTCTCTCTGCTGTTACACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NQMWETFLAMPT*LQTLLSAVTQG Trigger: GCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAGCTAGAAATGTTTCCCACATCTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCAGGACTGGAGTTTCTTTCCCATTTGAGCCATTGATATGGATGCTGGCTGAGCAGAACTTTTCATaGCACAGGTACCAAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: HPRTGVSFPFEPLIWMLAEQNFS*HRYQDT Trigger: AGTGTCTTGGTACCTGTGCAATGAAAAGTTCTGCTC...AGCCAGCATCCATATCAATGGCTCAAATGGGAAAGAAACTCCAGTCCTGGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR GCA 72 bp | AATCATAATAGCAAGTCTGTGTCCAGCTGCTCTATGTaGCTCCTGGACCTGCCTCAAACAAACAAAGCGCTA | + |
|
Preference number: 3 (lower is better) Translates to: NHNSKSVSSCSM*LLDLPQTNKAL Trigger: TAGCGCTTTGTTTGTTTGAGGCAGGTCCAGGAGGCACATAGAGCAGCTGGACACAGACTTGCTATTATGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR GCA 72 bp | AACAGAAGCAATCATAATAGCAAGTCTGTGTCCAGCTaGTCTATGTGCCTCCTGGACCTGCCTCAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NRSNHNSKSVSS*SMCLLDLPQTN Trigger: GTTTGTTTGAGGCAGGTCCAGGAGGCACATAGAGCAGCTGGACACAGACTTGCTATTATGATTGCTTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR CCA 72 bp | TACACGCAATTTCACCGTGCAAAAGCAAGCAGTATATaGGGCTTCGGAGCAGAACTTTTCATTGCACAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: YTQFHRAKASSI*GFGAELFIAQV Trigger: TACCTGTGCAATGAAAAGTTCTGCTCCGAAGCCCCATATACTGCTTGCTTTTGCACGGTGAAATTGCGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCCAGCTGCTCTATGTGCCTCCTGGACCTGCCTCAAACAAACAAAGCGCTCACCGAGCTGGCGCTaGAGTCGGTGCGCAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCPAALCASWTCLKQTKRSPSWR*SRCAVL Trigger: GAGGACTGCGCACCGACTGCAGCGCCAGCTCGGTGA...GCGCTTTGTTTGTTTGAGGCAGGTCCAGGAGGCACATAGAGCAGCTGGACACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR TCA 90 bp | GCGGTGAGCACCTCTAACCCAGCACTCAGGAGATGGAAGCAGAAGGAAACAGAACAGCTTATCCAGCACTaGGGCCAGGTGCCGGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AVSTSNPALRRWKQKETEQLIQH*GQVPGP Trigger: CGGACCCGGCACCTGGCCTCAGTGCTGGATAAGCTG...TTCTGTTTCCTTCTGCTTCCATCTCCTGAGTGCTGGGTTAGAGGTGCTCACCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | GTGTACTCTGAGGACAGAGGGGAATTGGGTGATGTGCCAAAACACCCAGATACCAGCACTGAGGCCAGGTaGCGGGTCCGGCTGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VYSEDRGELGDVPKHPDTSTEAR*RVRLAS Trigger: ACTCGCCAGCCGGACCCGGCACCTGGCCTCAGTGCT...GGTATCTGGGTGTTTTGGCACATCACCCAATTCCCCTCTGTCCTCAGAGTACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR TCA 90 bp | GTGTACTCTGAGGACAGAGGGGAATTGGGTGATGTGCCAAAACACCCAGATACCTGCGGATGGGCGTGCTaGAGGAGCCGCCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VYSEDRGELGDVPKHPDTCGWAC*RSRLPP Trigger: TGGAGGAAGGCGGCTCCTTCAGCACGCCCATCCGCA...GGTATCTGGGTGTTTTGGCACATCACCCAATTCCCCTCTGTCCTCAGAGTACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CCA 90 bp | CACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTAGGGGATGTGAGAGCTGGCAGTaGGGCGGGCTCTGCGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLADASLCCYTGQYFRGCESWQ*GGLCVR Trigger: CCGGACGCAGAGCCCGCCCCACTGCCAGCTCTCACA...TCCCCTAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CCA 90 bp | GCGGTGAGCACCTCTAACCCAGCACTCAGGAGATGGAAGCAGAAGGAAACAGAAAGGTGGGTCCAGCGATaGGGAGAGGCAGGACCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVSTSNPALRRWKQKETERWVQR*GEAGPE Trigger: TTCGGGTCCTGCCTCTCCCCATCGCTGGACCCACCT...TTCTGTTTCCTTCTGCTTCCATCTCCTGAGTGCTGGGTTAGAGGTGCTCACCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | ATGATGTCAGATAACCACACCCCCACCCCAGGACTGGAGTTTCTTTCCCATTTGCTGTCTGGCTCTGGCTaGAGCCTGGGCCGCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MMSDNHTPTPGLEFLSHLLSGSG*SLGRLG Trigger: CCCTAAGCGGCCCAGGCTGCAGCCAGAGCCAGACAG...CAAATGGGAAAGAAACTCCAGTCCTGGGGTGGGGGTGTGGTTATCTGACATCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR TCA 90 bp | CACCCCAGGACTGGAGTTTCTTTCCCATTTGAGCCATTGATATGGATGCTGGCTGCAGGTCTATGGTTGTaGGAGCTGGCAGTGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HPRTGVSFPFEPLIWMLAAGLWL*ELAVGR Trigger: CCGCCCCACTGCCAGCTCTCACAACCATAGACCTGC...AGCCAGCATCCATATCAATGGCTCAAATGGGAAAGAAACTCCAGTCCTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR TCA 90 bp | GTGTACTCTGAGGACAGAGGGGAATTGGGTGATGTGCCAAAACACCCAGATACCGCTGGGAGATGTCTCTaGGGATGGCGTCCACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VYSEDRGELGDVPKHPDTAGRCL*GWRPLP Trigger: CGGAAGTGGACGCCATCCTCAGAGACATCTCCCAGC...GGTATCTGGGTGTTTTGGCACATCACCCAATTCCCCTCTGTCCTCAGAGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | CACCCCAGGACTGGAGTTTCTTTCCCATTTGAGCCATTGATATGGATGCTGGCTTCCTGTTGGGGCAGATaGTGTCGAAGGCCCGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HPRTGVSFPFEPLIWMLASCWGR*CRRPGV Trigger: GACGCCGGGCCTTCGACAGCATCTGCCCCAACAGGA...AGCCAGCATCCATATCAATGGCTCAAATGGGAAAGAAACTCCAGTCCTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | CACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTAGGGGATTCCGAGCAGCGAGGTaGAGTCGGCGAGGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLADASLCCYTGQYFRGFRAAR*SRRGPA Trigger: TGCAGGACCTCGCCGACTGCACCTCGCTGCTCGGAA...TCCCCTAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | ACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTAGGGGAAACTTCCGCGCAACCCTaGCCTGCTTGCCCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TCLQTLLSAVTQGSILGETSAQP*PACPAA Trigger: TGCTGCGGGGCAAGCAGGGCAGGGTTGCGCGGAAGT...TTCCCCTAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | CACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTAGGGGAGAGAGCAGTCCCCAGTaGCCTCTGGTTCTGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLADASLCCYTGQYFRGESSPQ*PLVLVS Trigger: GCTGACCAGAACCAGAGGGCACTGGGGACTGCTCTC...TCCCCTAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CCA 90 bp | GTGTACTCTGAGGACAGAGGGGAATTGGGTGATGTGCCAAAACACCCAGATACCGGTCCAGCATCCTGTTaGGGCAGATGCTGTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYSEDRGELGDVPKHPDTGPASC*GRCCRR Trigger: CCTTCGACAGCATCTGCCCCAACAGGATGCTGGACC...GGTATCTGGGTGTTTTGGCACATCACCCAATTCCCCTCTGTCCTCAGAGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CCA 90 bp | ATGATGTCAGATAACCACACCCCCACCCCAGGACTGGAGTTTCTTTCCCATTTGTATGGTTGTGAGAGCTaGCAGTGGGGCGGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MMSDNHTPTPGLEFLSHLYGCES*QWGGLC Trigger: GCAGAGCCCGCCCCACTGCCAGCTCTCACAACCATA...CAAATGGGAAAGAAACTCCAGTCCTGGGGTGGGGGTGTGGTTATCTGACATCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CCA 90 bp | TATGCCCACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTCCAGTACTGCTCCGTTaGTGGTGGCGGCAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YAHLLADASLCCYTGQYFPVLLR*WWRQVW Trigger: CCAGACCTGCCGCCACCACCAACGGAGCAGTACTGG...AAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CCA 90 bp | ATATGGGGCTTCGGAGCAGAACTTTTCATTGCACAGGTACCAAGACACTTCTGTCCTCGGAAGGCGCCGTaGAGGTTCCTGGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWGFGAELFIAQVPRHFCPRKAP*RFLELQ Trigger: CTGCAGCTCCAGGAACCTCCACGGCGCCTTCCGAGG...ACAGAAGTGTCTTGGTACCTGTGCAATGAAAAGTTCTGCTCCGAAGCCCCATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CCA 90 bp | CTATGCCCACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTAAGCCAGGGTGCGGATaGTACTGTGGCTGCGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LCPLACRRFSLLLHRAVFKPGCG*YCGCGW Trigger: CCATCCGCAGCCACAGTACCATCCGCACCCTGGCTT...AAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR CAA 72 bp | CTCTGCCTCCCAAGTGCTGGGATGACCACTGCATCCTaGTGTGAGCTTGCTCCACAACTGCCAAGTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCLPSAGMTTAS*CELAPQLPSCF Trigger: GAAACAACTTGGCAGTTGTGGAGCAAGCTCACACAAGGATGCAGTGGTCATCCCAGCACTTGGGAGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGTGCGTGTGTATACACGCAATTTCACCGTGCAAAAGCAAGCAGTATATGCAGTCCTTGCTGTCTaGCTCTGGCTGCAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGVRVYTRNFTVQKQAVYAVLAV*LWLQPG Trigger: CCCAGGCTGCAGCCAGAGCCAGACAGCAAGGACTGC...ATATACTGCTTGCTTTTGCACGGTGAAATTGCGTGTATACACACGCACACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR TCA 90 bp | CACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTAGGGGACGGCAGGAGACTGCGTaGTCATCAGCTTATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLADASLCCYTGQYFRGRQETA*SSAYPA Trigger: TGCTGGATAAGCTGATGATCACGCAGTCTCCTGCCG...TCCCCTAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | GGGCTTCGGAGCAGAACTTTTCATTGCACAGGTACCAAGACACTTCTGTTTCTGCAGTCGGCGAGGTCCTaGAGGTCTATGGTTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLRSRTFHCTGTKTLLFLQSARS*RSMVVR Trigger: TCTCACAACCATAGACCTGCAGGACCTCGCCGACTG...CAGAAACAGAAGTGTCTTGGTACCTGTGCAATGAAAAGTTCTGCTCCGAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | CTTGCAGAGAATTCTGGGAACCAGATGTGGGAAACATTTCTAGCTATGCCCACTGGAGGTTCCTGGAGCTaGAGTCCTTGCTGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAENSGNQMWETFLAMPTGGSWS*SPCCLA Trigger: AGCCAGACAGCAAGGACTGCAGCTCCAGGAACCTCC...AGTGGGCATAGCTAGAAATGTTTCCCACATCTGGTTCCCAGAATTCTCTGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CCA 90 bp | CACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTAGGGGAAGGGAAAGTCACTGTTaGTCAGGGGAGGCGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLADASLCCYTGQYFRGRESHC*SGEATS Trigger: TGATGTCGCCTCCCCTGACCAACAGTGACTTTCCCT...TCCCCTAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR TCA 90 bp | ATATGGGGCTTCGGAGCAGAACTTTTCATTGCACAGGTACCAAGACACTTCTGTTCCTCCAGCTCACTGTaGCTCAGATTCACCGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IWGFGAELFIAQVPRHFCSSSSL*LRFTEL Trigger: CAGCTCGGTGAATCTGAGTCACAGTGAGCTGGAGGA...ACAGAAGTGTCTTGGTACCTGTGCAATGAAAAGTTCTGCTCCGAAGCCCCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | GAAACATTTCTAGCTATGCCCACTTGCTTGCAGACGCTTCTCTCTGCTGTTACAATCTCCTCCTGCTTCTaGGTCAGCGTCACGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETFLAMPTCLQTLLSAVTISSCF*VSVTCS Trigger: ACTGCACGTGACGCTGACGCAGAAGCAGGAGGAGAT...TGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAGCTAGAAATGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR CAA 72 bp | CAGATGTGGGAAACATTTCTAGCTATGCCCACTTGCTaGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QMWETFLAMPTC*QTLLSAVTQGS Trigger: ACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAGCTAGAAATGTTTCCCACATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR CAA 72 bp | GAACCAGATGTGGGAAACATTTCTAGCTATGCCCACTaGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPDVGNISSYAH*LADASLCCYTG Trigger: CCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAGCTAGAAATGTTTCCCACATCTGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR TCA 90 bp | ATATGGGGCTTCGGAGCAGAACTTTTCATTGCACAGGTACCAAGACACTTCTGTGTTGGTTATTCTCTATaGGAGCAGTCCCCAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IWGFGAELFIAQVPRHFCVGYSL*EQSPVP Trigger: GGGCACTGGGGACTGCTCTCATAGAGAATAACCAAC...ACAGAAGTGTCTTGGTACCTGTGCAATGAAAAGTTCTGCTCCGAAGCCCCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | GGGCTTCGGAGCAGAACTTTTCATTGCACAGGTACCAAGACACTTCTGTTTCTGGCTCCTTTTCGTTGTTaGCTTGATCTGGAAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLRSRTFHCTGTKTLLFLAPFRC*LDLEGL Trigger: GAGCCCTTCCAGATCAAGGCAACAACGAAAAGGAGC...CAGAAACAGAAGTGTCTTGGTACCTGTGCAATGAAAAGTTCTGCTCCGAAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR TCA 90 bp | ACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTAGGGGAACGACATCAAAGAGGATaGATCTGCAATGAGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TCLQTLLSAVTQGSILGERHQRG*ICNEVI Trigger: GATGACCTCATTGCAGATTCATCCTCTTTGATGTCG...TTCCCCTAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | ATATGGGGCTTCGGAGCAGAACTTTTCATTGCACAGGTACCAAGACACTTCTGTAAGTCTTCTTCAGTTTaGAAGGAGGGGTTCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: IWGFGAELFIAQVPRHFCKSSSV*KEGFCD Trigger: GTCGCAGAACCCCTCCTTGCAAACTGAAGAAGACTT...ACAGAAGTGTCTTGGTACCTGTGCAATGAAAAGTTCTGCTCCGAAGCCCCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | GTGTACTCTGAGGACAGAGGGGAATTGGGTGATGTGCCAAAACACCCAGATACCGCATCTCTGAAATTCTaGAGGTTGAAGTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VYSEDRGELGDVPKHPDTASLKF*RLKSSS Trigger: TGAAGAAGACTTCAACCTGCAGAATTTCAGAGATGC...GGTATCTGGGTGTTTTGGCACATCACCCAATTCCCCTCTGTCCTCAGAGTACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR GCA 90 bp | GTGTACTCTGAGGACAGAGGGGAATTGGGTGATGTGCCAAAACACCCAGATACCAATGAGGTCATCCATTaGATCTCTGAAATTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYSEDRGELGDVPKHPDTNEVIH*ISEILQ Trigger: CTGCAGAATTTCAGAGATGCAATGGATGACCTCATT...GGTATCTGGGTGTTTTGGCACATCACCCAATTCCCCTCTGTCCTCAGAGTACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR CAA 72 bp | CAAGCAGTATATGGGGCTTCGGAGCAGAACTTTTCATaGCACAGGTACCAAGACACTTCTGTTTCTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QAVYGASEQNFS*HRYQDTSVSEK Trigger: TTTTTCAGAAACAGAAGTGTCTTGGTACCTGTGCAATGAAAAGTTCTGCTCCGAAGCCCCATATACTGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| 3UTR CAA 72 bp | CCTATCCTGCATCAGCATTTGCCTAATTGTGTAGCTTaGCTTGGTTTTGTTTCTTTGCTATTTAAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PILHQHLPNCVA*LGFVSLLFKTG Trigger: CCCTGTCTTAAATAGCAAAGAAACAAAACCAAGCAAAGCTACACAATTAGGCAAATGCTGATGCAGGATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 90 bp | TCCCGGGCTTGCCGAGGGTCCGCCGCGACAGGTCCAGCATCCTGTTaGGGCAGATGCTGTCGAAGGCCCGGCGTCCGGCTGCGCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRACRGSAATGPASC*GRCCRRPGVRLRCP Trigger: AGGGCAGCGCAGCCGGACGCCGGGCCTTCGACAGCATCTGCCCCAACAGGATGCTGGACCTGTCGCGGCGGACCCTCGGCAAGCCCGGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | GGAGACGCTTCGGTTCCGAGCAGCGAGGTGCAGTCGGCGAGGTCCTaGAGGTCTATGGTTGTGAGAGCTGGCAGTGGGGCGGGCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GDASVPSSEVQSARS*RSMVVRAGSGAGSA Trigger: CGCAGAGCCCGCCCCACTGCCAGCTCTCACAACCATAGACCTGCAGGACCTCGCCGACTGCACCTCGCTGCTCGGAACCGAAGCGTCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS TCA 90 bp | GGTCACGATTGTGCAGGGCTTCCTCGCAGCGCTGGGAGATGTCTCTaGGGATGGCGTCCACTTCCGCGCAACCCTGCCCTGCTTGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GHDCAGLPRSAGRCL*GWRPLPRNPALLAP Trigger: CGGGGCAAGCAGGGCAGGGTTGCGCGGAAGTGGACGCCATCCTCAGAGACATCTCCCAGCGCTGCGAGGAAGCCCTGCACAATCGTGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 90 bp | AGGAGCCGCCTTCCTCCAGCTCACTGTGACTCAGATTCACCGAGCTaGCGCTGCAGTCGGTGCGCAGTCCTCGGAAGGCGCCGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSRLPPAHCDSDSPS*RCSRCAVLGRRRGG Trigger: ACCTCCACGGCGCCTTCCGAGGACTGCGCACCGACTGCAGCGCCAGCTCGGTGAATCTGAGTCACAGTGAGCTGGAGGAAGGCGGCTCCT 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS TCA 90 bp | CTGCGGATGGGCGTGCTGAAGGAGCCGCCTTCCTCCAGCTCACTGTaGCTCAGATTCACCGAGCTGGCGCTGCAGTCGGTGCGCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRMGVLKEPPSSSSL*LRFTELALQSVRSP Trigger: AGGACTGCGCACCGACTGCAGCGCCAGCTCGGTGAATCTGAGTCACAGTGAGCTGGAGGAAGGCGGCTCCTTCAGCACGCCCATCCGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | AGGACTTCCACGAAGGAACGAACTTCCTCTCCGGCTTCCCGGGCTTaGCGAGGGTCCGCCGCGACAGGTCCAGCATCCTGTTGGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTSTKERTSSPASRA*RGSAATGPASCWGR Trigger: TCTGCCCCAACAGGATGCTGGACCTGTCGCGGCGGACCCTCGGCAAGCCCGGGAAGCCGGAGAGGAAGTTCGTTCCTTCGTGGAAGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | AGCACTGAGGCCAGGTGCCGGGTCCGGCTGGCGAGTTCTTTCAGCTaGACGTTCCTCTCCCGGAGCGAGGCTATCTCCTCCTGCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: STEARCRVRLASSFS*TFLSRSEAISSCFC Trigger: GCAGAAGCAGGAGGAGATAGCCTCGCTCCGGGAGAGGAACGTGCAGCTGAAAGAACTCGCCAGCCGGACCCGGCACCTGGCCTCAGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | CTGTCTGGCTCTGGCTGCAGCCTGGGCCGCTTAGGGTCACGATTGTaGAGGGCTTCCTCGCAGCGCTGGGAGATGTCTCTGAGGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSGSGCSLGRLGSRL*RASSQRWEMSLRMA Trigger: CGCCATCCTCAGAGACATCTCCCAGCGCTGCGAGGAAGCCCTGCACAATCGTGACCCTAAGCGGCCCAGGCTGCAGCCAGAGCCAGACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 90 bp | CTGCTCCGTTGGTGGTGGCGGCAGGTCTGGAGACCCCAAGGCAGGTaGGTCCAGCGATGGGGAGAGGCAGGACCCGAAAGACGAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: LLRWWWRQVWRPQGR*VQRWGEAGPERRNI Trigger: GATGTTTCGTCTTTCGGGTCCTGCCTCTCCCCATCGCTGGACCCACCTGCCTTGGGGTCTCCAGACCTGCCGCCACCACCAACGGAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 90 bp | CTGGTTCTGGTCAGCCACCTCCTTCCAGTACTGCTCCGTTGGTGGTaGCGGCAGGTCTGGAGACCCCAAGGCAGGTGGGTCCAGCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLVSHLLPVLLRWW*RQVWRPQGRWVQRW Trigger: CCATCGCTGGACCCACCTGCCTTGGGGTCTCCAGACCTGCCGCCACCACCAACGGAGCAGTACTGGAAGGAGGTGGCTGACCAGAACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 90 bp | CCTCTGGTTCTGGTCAGCCACCTCCTTCCAGTACTGCTCCGTTGGTaGTGGCGGCAGGTCTGGAGACCCCAAGGCAGGTGGGTCCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PLVLVSHLLPVLLRW*WRQVWRPQGRWVQR Trigger: TCGCTGGACCCACCTGCCTTGGGGTCTCCAGACCTGCCGCCACCACCAACGGAGCAGTACTGGAAGGAGGTGGCTGACCAGAACCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 90 bp | CTGGGCCGCTTAGGGTCACGATTGTGCAGGGCTTCCTCGCAGCGCTaGGAGATGTCTCTGAGGATGGCGTCCACTTCCGCGCAACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGRLGSRLCRASSQR*EMSLRMASTSAQPC Trigger: GCAGGGTTGCGCGGAAGTGGACGCCATCCTCAGAGACATCTCCCAGCGCTGCGAGGAAGCCCTGCACAATCGTGACCCTAAGCGGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 90 bp | GTGAAGGCTTTGCCCTGGGGGAAAGCCAGGGTGCGGATGGTACTGTaGCTGCGGATGGGCGTGCTGAAGGAGCCGCCTTCCTCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VKALPWGKARVRMVL*LRMGVLKEPPSSSS Trigger: TGAGCTGGAGGAAGGCGGCTCCTTCAGCACGCCCATCCGCAGCCACAGTACCATCCGCACCCTGGCTTTCCCCCAGGGCAAAGCCTTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS TCA 90 bp | GAAGGGCTCGGCAGGAGACTGCGTGATCATCAGCTTATCCAGCACTaGGGCCAGGTGCCGGGTCCGGCTGGCGAGTTCTTTCAGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EGLGRRLRDHQLIQH*GQVPGPAGEFFQLH Trigger: GTGCAGCTGAAAGAACTCGCCAGCCGGACCCGGCACCTGGCCTCAGTGCTGGATAAGCTGATGATCACGCAGTCTCCTGCCGAGCCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS TCA 90 bp | GGAAAGCCAGGGTGCGGATGGTACTGTGGCTGCGGATGGGCGTGCTaGAGGAGCCGCCTTCCTCCAGCTCACTGTGACTCAGATTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: GKPGCGWYCGCGWAC*RSRLPPAHCDSDSP Trigger: CGGTGAATCTGAGTCACAGTGAGCTGGAGGAAGGCGGCTCCTTCAGCACGCCCATCCGCAGCCACAGTACCATCCGCACCCTGGCTTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | GCAGGAGACTGCGTGATCATCAGCTTATCCAGCACTGAGGCCAGGTaGCGGGTCCGGCTGGCGAGTTCTTTCAGCTGCACGTTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGDCVIISLSSTEAR*RVRLASSFSCTFLS Trigger: GGAGAGGAACGTGCAGCTGAAAGAACTCGCCAGCCGGACCCGGCACCTGGCCTCAGTGCTGGATAAGCTGATGATCACGCAGTCTCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 90 bp | TGGTGGCGGCAGGTCTGGAGACCCCAAGGCAGGTGGGTCCAGCGATaGGGAGAGGCAGGACCCGAAAGACGAAACATCACAAGGGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: WWRQVWRPQGRWVQR*GEAGPERRNITRGK Trigger: TTTTCCCCTTGTGATGTTTCGTCTTTCGGGTCCTGCCTCTCCCCATCGCTGGACCCACCTGCCTTGGGGTCTCCAGACCTGCCGCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | CTCCTTTTCGTTGTTGCCTTGATCTGGAAGGGCTCGGCAGGAGACTaGGTGATCATCAGCTTATCCAGCACTGAGGCCAGGTGCCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLFVVALIWKGSAGD*VIISLSSTEARCRV Trigger: GACCCGGCACCTGGCCTCAGTGCTGGATAAGCTGATGATCACGCAGTCTCCTGCCGAGCCCTTCCAGATCAAGGCAACAACGAAAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | CAGCGTCACGTGCAGTTGGTTATTCTCTATGAGAGCAGTCCCCAGTaGCCTCTGGTTCTGGTCAGCCACCTCCTTCCAGTACTGCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QRHVQLVILYESSPQ*PLVLVSHLLPVLLR Trigger: ACGGAGCAGTACTGGAAGGAGGTGGCTGACCAGAACCAGAGGGCACTGGGGACTGCTCTCATAGAGAATAACCAACTGCACGTGACGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | AGCTGCACGTTCCTCTCCCGGAGCGAGGCTATCTCCTCCTGCTTCTaGGTCAGCGTCACGTGCAGTTGGTTATTCTCTATGAGAGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCTFLSRSEAISSCF*VSVTCSWLFSMRAV Trigger: GACTGCTCTCATAGAGAATAACCAACTGCACGTGACGCTGACGCAGAAGCAGGAGGAGATAGCCTCGCTCCGGGAGAGGAACGTGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CAA 90 bp | CACCCCAGGACTGGAGTTTCTTTCCCATTTGAGCCATTGATATGGATGCTGGCTGCAACCCTGCCCTGCTaGCCCCGCAGCACAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: HPRTGVSFPFEPLIWMLAATLPC*PRSTEQ Trigger: CTGTTCTGTGCTGCGGGGCAAGCAGGGCAGGGTTGC...AGCCAGCATCCATATCAATGGCTCAAATGGGAAAGAAACTCCAGTCCTGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CAA 90 bp | GTGTACTCTGAGGACAGAGGGGAATTGGGTGATGTGCCAAAACACCCAGATACCCGGATGGTGAAGGCTTaGCCCTGGGGGAAAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VYSEDRGELGDVPKHPDTRMVKA*PWGKAR Trigger: CCTGGCTTTCCCCCAGGGCAAAGCCTTCACCATCCG...GGTATCTGGGTGTTTTGGCACATCACCCAATTCCCCTCTGTCCTCAGAGTACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 90 bp | GCACAGAACAGCTCCTCCAGGCTCCTTTTCGTTGTTGCCTTGATCTaGAAGGGCTCGGCAGGAGACTGCGTGATCATCAGCTTATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AQNSSSRLLFVVALI*KGSAGDCVIISLSS Trigger: GCTGGATAAGCTGATGATCACGCAGTCTCCTGCCGAGCCCTTCCAGATCAAGGCAACAACGAAAAGGAGCCTGGAGGAGCTGTTCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CAA 90 bp | GTGTACTCTGAGGACAGAGGGGAATTGGGTGATGTGCCAAAACACCCAGATACCCGCTTAGGGTCACGATaGTGCAGGGCTTCCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VYSEDRGELGDVPKHPDTRLGSR*CRASSQ Trigger: CTGCGAGGAAGCCCTGCACAATCGTGACCCTAAGCG...GGTATCTGGGTGTTTTGGCACATCACCCAATTCCCCTCTGTCCTCAGAGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CAA 90 bp | CACCCCAGGACTGGAGTTTCTTTCCCATTTGAGCCATTGATATGGATGCTGGCTCTGGAGCTGCAGTCCTaGCTGTCTGGCTCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HPRTGVSFPFEPLIWMLALELQS*LSGSGC Trigger: GCAGCCAGAGCCAGACAGCAAGGACTGCAGCTCCAG...AGCCAGCATCCATATCAATGGCTCAAATGGGAAAGAAACTCCAGTCCTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | TCTTTCAGCTGCACGTTCCTCTCCCGGAGCGAGGCTATCTCCTCCTaGTTCTGCGTCAGCGTCACGTGCAGTTGGTTATTCTCTATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFSCTFLSRSEAISS*FCVSVTCSWLFSMR Trigger: TCTCATAGAGAATAACCAACTGCACGTGACGCTGACGCAGAAGCAGGAGGAGATAGCCTCGCTCCGGGAGAGGAACGTGCAGCTGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | AAATTCTGCAGGTTGAAGTCTTCTTCAGTTTGCAAGGAGGGGTTCTaGGACGCGGACGAATCACCACTAGGAGACGCTTCGGTTCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KFCRLKSSSVCKEGF*DADESPLGDASVPS Trigger: GCTCGGAACCGAAGCGTCTCCTAGTGGTGATTCGTCCGCGTCGCAGAACCCCTCCTTGCAAACTGAAGAAGACTTCAACCTGCAGAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CAA 90 bp | CTATGCCCACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTAGGTCCAGCATCCTGTaGGGGCAGATGCTGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LCPLACRRFSLLLHRAVFRSSIL*GQMLSK Trigger: CTTCGACAGCATCTGCCCCAACAGGATGCTGGACCT...AAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CAA 90 bp | ATGTGGGAAACATTTCTAGCTATGCCCACTTGCTTGCAGACGCTTCTCTCTGCTAAGGGAAAGTCACTGTaGGTCAGGGGAGGCGACATC | + |
|
Preference number: 5 (lower is better) Translates to: MWETFLAMPTCLQTLLSAKGKSL*VRGGDI Trigger: GATGTCGCCTCCCCTGACCAACAGTGACTTTCCCTT...AGCAGAGAGAAGCGTCTGCAAGCAAGTGGGCATAGCTAGAAATGTTTCCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS-3UTR CAA 90 bp | ACTTGCTTGCAGACGCTTCTCTCTGCTGTTACACAGGGCAGTATTTTAGGGGAAGAAGTCTTCTTCAGTTaGCAAGGAGGGGTTCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: TCLQTLLSAVTQGSILGEEVFFS*QGGVLR Trigger: TCGCAGAACCCCTCCTTGCAAACTGAAGAAGACTTC...TTCCCCTAAAATACTGCCCTGTGTAACAGCAGAGAGAAGCGTCTGCAAGCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS TCA 90 bp | AAAGGGAAAGTCACTGTTGGTCAGGGGAGGCGACATCAAAGAGGATaGATCTGCAATGAGGTCATCCATTGCATCTCTGAAATTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGKVTVGQGRRHQRG*ICNEVIHCISEILQ Trigger: CTGCAGAATTTCAGAGATGCAATGGATGACCTCATTGCAGATTCATCCTCTTTGATGTCGCCTCCCCTGACCAACAGTGACTTTCCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 90 bp | GAGGATGAATCTGCAATGAGGTCATCCATTGCATCTCTGAAATTCTaGAGGTTGAAGTCTTCTTCAGTTTGCAAGGAGGGGTTCTGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: EDESAMRSSIASLKF*RLKSSSVCKEGFCD Trigger: GTCGCAGAACCCCTCCTTGCAAACTGAAGAAGACTTCAACCTGCAGAATTTCAGAGATGCAATGGATGACCTCATTGCAGATTCATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 90 bp | TTCCCGGGCTTGCCGAGGGTCCGCCGCGACAGGTCCAGCATCCTGTaGGGGCAGATGCTGTCGAAGGCCCGGCGTCCGGCTGCGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FPGLPRVRRDRSSIL*GQMLSKARRPAALP Trigger: GGGCAGCGCAGCCGGACGCCGGGCCTTCGACAGCATCTGCCCCAACAGGATGCTGGACCTGTCGCGGCGGACCCTCGGCAAGCCCGGGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | TCCGCCGCGACAGGTCCAGCATCCTGTTGGGGCAGATaGTGTCGAAGGCCCGGCGTCCGGCTGCGCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SAATGPASCWGR*CRRPGVRLRCP Trigger: AGGGCAGCGCAGCCGGACGCCGGGCCTTCGACAGCATCTGCCCCAACAGGATGCTGGACCTGTCGCGGCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 72 bp | TGCCGAGGGTCCGCCGCGACAGGTCCAGCATCCTGTTaGGGCAGATGCTGTCGAAGGCCCGGCGTCCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CRGSAATGPASC*GRCCRRPGVRL Trigger: CAGCCGGACGCCGGGCCTTCGACAGCATCTGCCCCAACAGGATGCTGGACCTGTCGCGGCGGACCCTCGGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 72 bp | TTGCCGAGGGTCCGCCGCGACAGGTCCAGCATCCTGTaGGGGCAGATGCTGTCGAAGGCCCGGCGTCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LPRVRRDRSSIL*GQMLSKARRPA Trigger: AGCCGGACGCCGGGCCTTCGACAGCATCTGCCCCAACAGGATGCTGGACCTGTCGCGGCGGACCCTCGGCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | CTGCGTCCGGAGGGTCCTCGTACACCGCCACCGGGCTaGCGCCACCGCATCCCGAAAAGGACTTCCACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRPEGPRTPPPG*RHRIPKRTSTK Trigger: CTTCGTGGAAGTCCTTTTCGGGATGCGGTGGCGGCAGCCCGGTGGCGGTGTACGAGGACCCTCCGGACGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | GTCTATGGTTGTGAGAGCTGGCAGTGGGGCGGGCTCTaGGTCCGGAGGGTCCTCGTACACCGCCACCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VYGCESWQWGGL*VRRVLVHRHRA Trigger: AGCCCGGTGGCGGTGTACGAGGACCCTCCGGACGCAGAGCCCGCCCCACTGCCAGCTCTCACAACCATAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | GCCAGGTGCCGGGTCCGGCTGGCGAGTTCTTTCAGCTaGACGTTCCTCTCCCGGAGCGAGGCTATCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARCRVRLASSFS*TFLSRSEAISS Trigger: GGAGGAGATAGCCTCGCTCCGGGAGAGGAACGTGCAGCTGAAAGAACTCGCCAGCCGGACCCGGCACCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 72 bp | TGGTGGTGGCGGCAGGTCTGGAGACCCCAAGGCAGGTaGGTCCAGCGATGGGGAGAGGCAGGACCCGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WWWRQVWRPQGR*VQRWGEAGPER Trigger: TCTTTCGGGTCCTGCCTCTCCCCATCGCTGGACCCACCTGCCTTGGGGTCTCCAGACCTGCCGCCACCACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 72 bp | CGGTGCGCAGTCCTCGGAAGGCGCCGTGGAGGTTCCTaGAGCTGCAGTCCTTGCTGTCTGGCTCTGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RCAVLGRRRGGS*SCSPCCLALAA Trigger: TGCAGCCAGAGCCAGACAGCAAGGACTGCAGCTCCAGGAACCTCCACGGCGCCTTCCGAGGACTGCGCACCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 72 bp | CACGAAGGAACGAACTTCCTCTCCGGCTTCCCGGGCTaGCCGAGGGTCCGCCGCGACAGGTCCAGCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HEGTNFLSGFPG*PRVRRDRSSIL Trigger: CAGGATGCTGGACCTGTCGCGGCGGACCCTCGGCAAGCCCGGGAAGCCGGAGAGGAAGTTCGTTCCTTCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS TCA 72 bp | TGTGCAGGGCTTCCTCGCAGCGCTGGGAGATGTCTCTaGGGATGGCGTCCACTTCCGCGCAACCCTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CAGLPRSAGRCL*GWRPLPRNPAL Trigger: CAGGGCAGGGTTGCGCGGAAGTGGACGCCATCCTCAGAGACATCTCCCAGCGCTGCGAGGAAGCCCTGCACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | ACGAAGGAACGAACTTCCTCTCCGGCTTCCCGGGCTTaGCGAGGGTCCGCCGCGACAGGTCCAGCATCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TKERTSSPASRA*RGSAATGPASC Trigger: ACAGGATGCTGGACCTGTCGCGGCGGACCCTCGGCAAGCCCGGGAAGCCGGAGAGGAAGTTCGTTCCTTCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | TCGGTTCCGAGCAGCGAGGTGCAGTCGGCGAGGTCCTaGAGGTCTATGGTTGTGAGAGCTGGCAGTGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SVPSSEVQSARS*RSMVVRAGSGA Trigger: CGCCCCACTGCCAGCTCTCACAACCATAGACCTGCAGGACCTCGCCGACTGCACCTCGCTGCTCGGAACCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | GCCCTCTGGTTCTGGTCAGCCACCTCCTTCCAGTACTaGTCCGTTGGTGGTGGCGGCAGGTCTGGAGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: ALWFWSATSFQY*SVGGGGRSGDP Trigger: GGGGTCTCCAGACCTGCCGCCACCACCAACGGAGCAGTACTGGAAGGAGGTGGCTGACCAGAACCAGAGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 72 bp | GTCAGCCACCTCCTTCCAGTACTGCTCCGTTGGTGGTaGCGGCAGGTCTGGAGACCCCAAGGCAGGTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VSHLLPVLLRWW*RQVWRPQGRWV Trigger: GACCCACCTGCCTTGGGGTCTCCAGACCTGCCGCCACCACCAACGGAGCAGTACTGGAAGGAGGTGGCTGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 72 bp | CTGGTCAGCCACCTCCTTCCAGTACTGCTCCGTTGGTaGTGGCGGCAGGTCTGGAGACCCCAAGGCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LVSHLLPVLLRW*WRQVWRPQGRW Trigger: CCACCTGCCTTGGGGTCTCCAGACCTGCCGCCACCACCAACGGAGCAGTACTGGAAGGAGGTGGCTGACCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 72 bp | GGCTCTGGCTGCAGCCTGGGCCGCTTAGGGTCACGATaGTGCAGGGCTTCCTCGCAGCGCTGGGAGATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSGCSLGRLGSR*CRASSQRWEMS Trigger: AGACATCTCCCAGCGCTGCGAGGAAGCCCTGCACAATCGTGACCCTAAGCGGCCCAGGCTGCAGCCAGAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 90 bp | AAGGACTTCCACGAAGGAACGAACTTCCTCTCCGGCTTCCCGGGCTaGCCGAGGGTCCGCCGCGACAGGTCCAGCATCCTGTTGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KDFHEGTNFLSGFPG*PRVRRDRSSILLGQ Trigger: CTGCCCCAACAGGATGCTGGACCTGTCGCGGCGGACCCTCGGCAAGCCCGGGAAGCCGGAGAGGAAGTTCGTTCCTTCGTGGAAGTCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 90 bp | GTGCCCTCTGGTTCTGGTCAGCCACCTCCTTCCAGTACTGCTCCGTaGGTGGTGGCGGCAGGTCTGGAGACCCCAAGGCAGGTGGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPSGSGQPPPSSTAP*VVAAGLETPRQVGP Trigger: TGGACCCACCTGCCTTGGGGTCTCCAGACCTGCCGCCACCACCAACGGAGCAGTACTGGAAGGAGGTGGCTGACCAGAACCAGAGGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 72 bp | GCTTATCCAGCACTGAGGCCAGGTGCCGGGTCCGGCTaGCGAGTTCTTTCAGCTGCACGTTCCTCTCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: AYPALRPGAGSG*RVLSAARSSPG Trigger: TCCGGGAGAGGAACGTGCAGCTGAAAGAACTCGCCAGCCGGACCCGGCACCTGGCCTCAGTGCTGGATAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 72 bp | CTTCCTCCAGCTCACTGTGACTCAGATTCACCGAGCTaGCGCTGCAGTCGGTGCGCAGTCCTCGGAAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LPPAHCDSDSPS*RCSRCAVLGRR Trigger: GCGCCTTCCGAGGACTGCGCACCGACTGCAGCGCCAGCTCGGTGAATCTGAGTCACAGTGAGCTGGAGGAAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 72 bp | CCACCGGTGACTGTCCGGATGGTGAAGGCTTTGCCCTaGGGGAAAGCCAGGGTGCGGATGGTACTGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPVTVRMVKALP*GKARVRMVLWL Trigger: CAGCCACAGTACCATCCGCACCCTGGCTTTCCCCCAGGGCAAAGCCTTCACCATCCGGACAGTCACCGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 72 bp | GGTTCTGGTCAGCCACCTCCTTCCAGTACTGCTCCGTaGGTGGTGGCGGCAGGTCTGGAGACCCCAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSGQPPPSSTAP*VVAAGLETPRQ Trigger: CTGCCTTGGGGTCTCCAGACCTGCCGCCACCACCAACGGAGCAGTACTGGAAGGAGGTGGCTGACCAGAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 90 bp | TTGCTGTCTGGCTCTGGCTGCAGCCTGGGCCGCTTAGGGTCACGATaGTGCAGGGCTTCCTCGCAGCGCTGGGAGATGTCTCTGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LLSGSGCSLGRLGSR*CRASSQRWEMSLRM Trigger: CATCCTCAGAGACATCTCCCAGCGCTGCGAGGAAGCCCTGCACAATCGTGACCCTAAGCGGCCCAGGCTGCAGCCAGAGCCAGACAGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | TTCCTGGAGCTGCAGTCCTTGCTGTCTGGCTCTGGCTaGAGCCTGGGCCGCTTAGGGTCACGATTGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLELQSLLSGSG*SLGRLGSRLCR Trigger: CCTGCACAATCGTGACCCTAAGCGGCCCAGGCTGCAGCCAGAGCCAGACAGCAAGGACTGCAGCTCCAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS TCA 72 bp | GGCAGGAGACTGCGTGATCATCAGCTTATCCAGCACTaGGGCCAGGTGCCGGGTCCGGCTGGCGAGTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GRRLRDHQLIQH*GQVPGPAGEFF Trigger: AAAGAACTCGCCAGCCGGACCCGGCACCTGGCCTCAGTGCTGGATAAGCTGATGATCACGCAGTCTCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | TGCGTGATCATCAGCTTATCCAGCACTGAGGCCAGGTaGCGGGTCCGGCTGGCGAGTTCTTTCAGCTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: CVIISLSSTEAR*RVRLASSFSCT Trigger: CGTGCAGCTGAAAGAACTCGCCAGCCGGACCCGGCACCTGGCCTCAGTGCTGGATAAGCTGATGATCACGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | TGCACGTTCCTCTCCCGGAGCGAGGCTATCTCCTCCTaGTTCTGCGTCAGCGTCACGTGCAGTTGGTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: CTFLSRSEAISS*FCVSVTCSWLF Trigger: GAATAACCAACTGCACGTGACGCTGACGCAGAAGCAGGAGGAGATAGCCTCGCTCCGGGAGAGGAACGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CCA 72 bp | AGCTCCTCCAGGCTCCTTTTCGTTGTTGCCTTGATCTaGAAGGGCTCGGCAGGAGACTGCGTGATCATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRLLFVVALI*KGSAGDCVIIS Trigger: GCTGATGATCACGCAGTCTCCTGCCGAGCCCTTCCAGATCAAGGCAACAACGAAAAGGAGCCTGGAGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS TCA 72 bp | TCTGCGTCAGCGTCACGTGCAGTTGGTTATTCTCTATaGGAGCAGTCCCCAGTGCCCTCTGGTTCTGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SASASRAVGYSL*EQSPVPSGSGQ Trigger: CTGACCAGAACCAGAGGGCACTGGGGACTGCTCTCATAGAGAATAACCAACTGCACGTGACGCTGACGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | TTCCTCTCCCGGAGCGAGGCTATCTCCTCCTGCTTCTaGGTCAGCGTCACGTGCAGTTGGTTATTCTCTATG | + |
|
Preference number: 6 (lower is better) Translates to: FLSRSEAISSCF*VSVTCSWLFSM Trigger: CATAGAGAATAACCAACTGCACGTGACGCTGACGCAGAAGCAGGAGGAGATAGCCTCGCTCCGGGAGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | AGGTTGAAGTCTTCTTCAGTTTGCAAGGAGGGGTTCTaGGACGCGGACGAATCACCACTAGGAGACGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RLKSSSVCKEGF*DADESPLGDAS Trigger: CGAAGCGTCTCCTAGTGGTGATTCGTCCGCGTCGCAGAACCCCTCCTTGCAAACTGAAGAAGACTTCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | GTGCAGTTGGTTATTCTCTATGAGAGCAGTCCCCAGTaGCCTCTGGTTCTGGTCAGCCACCTCCTTCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: VQLVILYESSPQ*PLVLVSHLLPV Trigger: TACTGGAAGGAGGTGGCTGACCAGAACCAGAGGGCACTGGGGACTGCTCTCATAGAGAATAACCAACTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 72 bp | TATCTCCTCCTGCTTCTGCGTCAGCGTCACGTGCAGTaGGTTATTCTCTATGAGAGCAGTCCCCAGTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: YLLLLLRQRHVQ*VILYESSPQCP Trigger: AGGGCACTGGGGACTGCTCTCATAGAGAATAACCAACTGCACGTGACGCTGACGCAGAAGCAGGAGGAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS GCA 72 bp | TCTCTGAAATTCTGCAGGTTGAAGTCTTCTTCAGTTTaGAAGGAGGGGTTCTGCGACGCGGACGAATCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SLKFCRLKSSSV*KEGFCDADESP Trigger: TGGTGATTCGTCCGCGTCGCAGAACCCCTCCTTGCAAACTGAAGAAGACTTCAACCTGCAGAATTTCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 72 bp | ATCTCTGAAATTCTGCAGGTTGAAGTCTTCTTCAGTTaGCAAGGAGGGGTTCTGCGACGCGGACGAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: ISEILQVEVFFS*QGGVLRRGRIT Trigger: GGTGATTCGTCCGCGTCGCAGAACCCCTCCTTGCAAACTGAAGAAGACTTCAACCTGCAGAATTTCAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||
| CDS CAA 90 bp | GAATCTGCAATGAGGTCATCCATTGCATCTCTGAAATTCTGCAGGTaGAAGTCTTCTTCAGTTTGCAAGGAGGGGTTCTGCGACGCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ESAMRSSIASLKFCR*KSSSVCKEGFCDAD Trigger: GTCCGCGTCGCAGAACCCCTCCTTGCAAACTGAAGAAGACTTCAACCTGCAGAATTTCAGAGATGCAATGGATGACCTCATTGCAGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092089.6 |
||