Pregenerated sensors for MCFD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024150Ensembl transcript IDs: ENSMUST00000024963.11, ENSMUST00000129616.8, ENSMUST00000144236.9, ENSMUST00000145895.8, ENSMUST00000151155.8, ENSMUST00000155904.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTACCTCACAGCTTCTGGGAGGAAGGCAGGTGTGAATGCTGGCACTaGTCCAGCCTCCATGCGGCAGGAGGCTTCATGGGGGACAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LPHSFWEEGRCECWH*SSLHAAGGFMGDRV Trigger: GACTCTGTCCCCCATGAAGCCTCCTGCCGCATGGAGGCTGGATCAGTGCCAGCATTCACACCTGCCTTCCTCCCAGAAGCTGTGAGGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR GCA 90 bp | AACTCGGGATACCCACCGCCCTTCCGAAGATCCGCATCCAGCTCTTaGCCAACAAGCTTAAACACACCTCTAGGGACTGAGGCCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: NSGYPPPFRRSASSS*PTSLNTPLGTEACP Trigger: GGGACAGGCCTCAGTCCCTAGAGGTGTGTTTAAGCTTGTTGGGCAAGAGCTGGATGCGGATCTTCGGAAGGGCGGTGGGTATCCCGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR GCA 90 bp | GGTGCTTCATTTCCAAAAGGCCAGTGGGCAAGGAATCCTAGACTCTaGATCTGGGTGGCCTCAGTGGGCGACATTCCTCTTCTGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: GASFPKGQWARNPRL*IWVASVGDIPLLLW Trigger: CCACAGCAGAAGAGGAATGTCGCCCACTGAGGCCACCCAGATGCAGAGTCTAGGATTCCTTGCCCACTGGCCTTTTGGAAATGAAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR TCA 90 bp | AGCAGAGTAAGTGTCTCCCCTATTGATGCAGGCAGGCAGGGAGCCTaGCATGACCATGCCTTGGGACAGCAGGAAGTACCTCACAGTATG | + |
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Preference number: 1 (lower is better) Translates to: SRVSVSPIDAGRQGA*HDHALGQQEVPHSM Trigger: CATACTGTGAGGTACTTCCTGCTGTCCCAAGGCATGGTCATGTCAGGCTCCCTGCCTGCCTGCATCAATAGGGGAGACACTTACTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
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| 3UTR CCA 90 bp | AGGCTAATTATTCAGGCCAGTGGTGCTTCATTTCCAAAAGGCCAGTaGGCAAGGAATCCTAGACTCTGCATCTGGGTGGCCTCAGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: RLIIQASGASFPKGQ*ARNPRLCIWVASVG Trigger: GCCCACTGAGGCCACCCAGATGCAGAGTCTAGGATTCCTTGCCCACTGGCCTTTTGGAAATGAAGCACCACTGGCCTGAATAATTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR CCA 90 bp | ACTGACCACATCTGCCTAAAGACAGGACCAACCAGGGCAAGCGTGTaGCTTTCACACTCTCCCTCCACTGTTTCTCAAGTGTGTCCACTT | + |
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Preference number: 1 (lower is better) Translates to: TDHICLKTGPTRASV*LSHSPSTVSQVCPL Trigger: AAGTGGACACACTTGAGAAACAGTGGAGGGAGAGTGTGAAAGCCACACGCTTGCCCTGGTTGGTCCTGTCTTTAGGCAGATGTGGTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR CCA 90 bp | TTCCAAAAGGCCAGTGGGCAAGGAATCCTAGACTCTGCATCTGGGTaGCCTCAGTGGGCGACATTCCTCTTCTGCTGTGGCTTTAATATA | + |
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Preference number: 1 (lower is better) Translates to: FQKASGQGILDSASG*PQWATFLFCCGFNI Trigger: TATATTAAAGCCACAGCAGAAGAGGAATGTCGCCCACTGAGGCCACCCAGATGCAGAGTCTAGGATTCCTTGCCCACTGGCCTTTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR TCA 90 bp | TGGCCTCAGTGGGCGACATTCCTCTTCTGCTGTGGCTTTAATATATaGTGCTGTATGCCTGGGGAACAGAATACTGACCACATCTGCCTA | + |
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Preference number: 1 (lower is better) Translates to: WPQWATFLFCCGFNI*CCMPGEQNTDHICL Trigger: TAGGCAGATGTGGTCAGTATTCTGTTCCCCAGGCATACAGCATCATATATTAAAGCCACAGCAGAAGAGGAATGTCGCCCACTGAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR CCA 90 bp | CCTGGGAGCAAGGATACAATACAGGGGTCAGGAAAGCTCAGACAGTaGAAAGTGATTAGAGAACACACCCCAATTCAAGGTTTCCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: PGSKDTIQGSGKLRQ*KVIREHTPIQGFPP Trigger: AGGAGGGAAACCTTGAATTGGGGTGTGTTCTCTAATCACTTTCCACTGTCTGAGCTTTCCTGACCCCTGTATTGTATCCTTGCTCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAGGGCCTGGTGAGCTACCTCACAGCTTCTGGGAGGAAGGCAGGTGTGAACTACAGTCGGATTCCTaGGAACTCGGGATACCCACC | + |
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Preference number: 2 (lower is better) Translates to: GPGPGELPHSFWEEGRCELQSDS*ELGIPT Trigger: GGTGGGTATCCCGAGTTCTCAGGAATCCGACTGTAG...TTCACACCTGCCTTCCTCCCAGAAGCTGTGAGGTAGCTCACCAGGCCCTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR-3UTR GCA 90 bp | GTGTCTCCCCTATTGATGCAGGCAGGCAGGGAGCCTGACATGACCATGCCTTGGCTACTTCCAAAGCTCTaGCCCTTGGTCCCGGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: VSPLLMQAGREPDMTMPWLLPKL*PLVPVS Trigger: TGACACCGGGACCAAGGGGCAGAGCTTTGGAAGTAG...CCAAGGCATGGTCATGTCAGGCTCCCTGCCTGCCTGCATCAATAGGGGAGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCCAGGGCCTGGTGAGCTACCTCACAGCTTCTGGGAGGAAGGCAGGTGTGAAAGCAAGGGTCACATGTaGACAAAGGAAAGAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: GPGPGELPHSFWEEGRCESKGHM*TKERAN Trigger: GTTGGCTCTTTCCTTTGTGCACATGTGACCCTTGCT...TTCACACCTGCCTTCCTCCCAGAAGCTGTGAGGTAGCTCACCAGGCCCTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAGGTGTGAATGCTGGCACTGATCCAGCCTCCATGCGGCAGGAGGCTTCAAGGAATCCTAGACTCTaGATCTGGGTGGCCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: KAGVNAGTDPASMRQEASRNPRL*IWVASV Trigger: CACTGAGGCCACCCAGATGCAGAGTCTAGGATTCCT...TGAAGCCTCCTGCCGCATGGAGGCTGGATCAGTGCCAGCATTCACACCTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTGTGAATGCTGGCACTGATCCAGCCTCCATGCGGCAGGAGGCTTCATGGTCAGACAGTGGAAAGTaGTTAGAGAACACACCCCAA | + |
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Preference number: 2 (lower is better) Translates to: AGVNAGTDPASMRQEASWSDSGK*LENTPQ Trigger: TTGGGGTGTGTTCTCTAATCACTTTCCACTGTCTGA...CCATGAAGCCTCCTGCCGCATGGAGGCTGGATCAGTGCCAGCATTCACACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTCCCCTATTGATGCAGGCAGGCAGGGAGCCTGACATGACCATGCCTTGGACCCTTCTTCTCAGATaGAATGACCGCTTTCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VSPLLMQAGREPDMTMPWTLLLR*NDRFPV Trigger: CACAGGAAAGCGGTCATTTCATCTGAGAAGAAGGGT...CCAAGGCATGGTCATGTCAGGCTCCCTGCCTGCCTGCATCAATAGGGGAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACTGAGGCCTGTCCCACTTCTCTCCACAGTCATGTGGCTTCTTCCTCACCCAGCAAGGGTCACATGTaGACAAAGGAAAGAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: GTEACPTSLHSHVASSSPSKGHM*TKERAN Trigger: GTTGGCTCTTTCCTTTGTGCACATGTGACCCTTGCT...GGGTGAGGAAGAAGCCACATGACTGTGGAGAGAAGTGGGACAGGCCTCAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGAATCCCCTGTGCAAGACAGAACGGCCCAGGGCCTGGTGAGCTACCTCACATATTCAGGCCAGTGGTaGTTCATTTCCAAAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TESPVQDRTAQGLVSYLTYSGQW*FISKRP Trigger: TGGCCTTTTGGAAATGAAGCACCACTGGCCTGAATA...TGTGAGGTAGCTCACCAGGCCCTGGGCCGTTCTGTCTTGCACAGGGGATTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTTTCACACTCTCCCTCCACTGTTTCTCAAGTGTGTCCACTTGGCCAAGCCTCTCCACAGTCATGTaGCTTCTTCCTCACCCCACT | + |
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Preference number: 2 (lower is better) Translates to: VAFTLSLHCFSSVSTWPSLSTVM*LLPHPT Trigger: AGTGGGGTGAGGAAGAAGCCACATGACTGTGGAGAG...GCTTGGCCAAGTGGACACACTTGAGAAACAGTGGAGGGAGAGTGTGAAAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGAATCCCCTGTGCAAGACAGAACGGCCCAGGGCCTGGTGAGCTACCTCACAAGCAAGTACAACCTGTaGCAGCTTCTCTTTCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: TESPVQDRTAQGLVSYLTSKYNL*QLLFQL Trigger: TAGCTGAAAGAGAAGCTGCCACAGGTTGTACTTGCT...TGTGAGGTAGCTCACCAGGCCCTGGGCCGTTCTGTCTTGCACAGGGGATTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAGGTGTGAATGCTGGCACTGATCCAGCCTCCATGCGGCAGGAGGCTTCAGGAAAGCTCAGACAGTaGAAAGTGATTAGAGAACAC | + |
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Preference number: 2 (lower is better) Translates to: KAGVNAGTDPASMRQEASGKLRQ*KVIREH Trigger: GTGTTCTCTAATCACTTTCCACTGTCTGAGCTTTCC...TGAAGCCTCCTGCCGCATGGAGGCTGGATCAGTGCCAGCATTCACACCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR-3UTR TCA 90 bp | CTGATCCAGCCTCCATGCGGCAGGAGGCTTCATGGGGGACAGAGTCAACGTCAAGCTGACAGTTTAACCTaGGATACCAAGTTAACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LIQPPCGRRLHGGQSQRQADSLT*DTKLTV Trigger: AACTGTTAACTTGGTATCTCAGGTTAAACTGTCAGC...TTGACGTTGACTCTGTCCCCCATGAAGCCTCCTGCCGCATGGAGGCTGGATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR-3UTR GCA 90 bp | ACAGAATCCCCTGTGCAAGACAGAACGGCCCAGGGCCTGGTGAGCTACCTCACAGTCAACGTCAACAGCTaGTTGCTTTTTCATCCATTT | + |
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Preference number: 2 (lower is better) Translates to: TESPVQDRTAQGLVSYLTVNVNS*LLFHPF Trigger: AAATGGATGAAAAAGCAAGCAGCTGTTGACGTTGAC...TGTGAGGTAGCTCACCAGGCCCTGGGCCGTTCTGTCTTGCACAGGGGATTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR-3UTR CCA 90 bp | CTGATCCAGCCTCCATGCGGCAGGAGGCTTCATGGGGGACAGAGTCAACGTCAAAATTATTCAGGCCAGTaGTGCTTCATTTCCAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LIQPPCGRRLHGGQSQRQNYSGQ*CFISKR Trigger: CCTTTTGGAAATGAAGCACCACTGGCCTGAATAATT...TTGACGTTGACTCTGTCCCCCATGAAGCCTCCTGCCGCATGGAGGCTGGATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCCACTGTTTCTCAAGTGTGTCCACTTGGCCAAGCAGCCTGTCTTTACTTCCCACTCTTACAGACTaGCACAGGCTCTTACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: SLHCFSSVSTWPSSLSLLPTLTD*HRLLPK Trigger: CTTTGGTAAGAGCCTGTGGCAGTCTGTAAGAGTGGG...AAGTAAAGACAGGCTGCTTGGCCAAGTGGACACACTTGAGAAACAGTGGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR-3UTR GCA 90 bp | GCATCTGGGTGGCCTCAGTGGGCGACATTCCTCTTCTGCTGTGGCTTTAATATATCCGCATCCAGCTCTTaGCCAACAAGCTTAAACACA | + |
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Preference number: 2 (lower is better) Translates to: ASGWPQWATFLFCCGFNISASSS*PTSLNT Trigger: TGTGTTTAAGCTTGTTGGGCAAGAGCTGGATGCGGA...TATATTAAAGCCACAGCAGAAGAGGAATGTCGCCCACTGAGGCCACCCAGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTGATCCTGCTATCATTCTGGATTCTCTTACGGAATGTCTACAACATCTCCTACAGTCGGATTCCTaGGAACTCGGGATACCCACC | + |
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Preference number: 2 (lower is better) Translates to: FPDPAIILDSLTECLQHLLQSDS*ELGIPT Trigger: GGTGGGTATCCCGAGTTCTCAGGAATCCGACTGTAG...GAGATGTTGTAGACATTCCGTAAGAGAATCCAGAATGATAGCAGGATCAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR-3UTR CCA 90 bp | TCCATTTCTTTCCTGATCCTGCTATCATTCTGGATTCTCTTACGGAATGTCTACCTCTCCACAGTCATGTaGCTTCTTCCTCACCCCACT | + |
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Preference number: 2 (lower is better) Translates to: SISFLILLSFWILLRNVYLSTVM*LLPHPT Trigger: AGTGGGGTGAGGAAGAAGCCACATGACTGTGGAGAG...GTAGACATTCCGTAAGAGAATCCAGAATGATAGCAGGATCAGGAAAGAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR-3UTR TCA 90 bp | TCCATTTCTTTCCTGATCCTGCTATCATTCTGGATTCTCTTACGGAATGTCTACTCCCTCCTGGTCAAATaGTACAACACAGGGTATGGC | + |
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Preference number: 2 (lower is better) Translates to: SISFLILLSFWILLRNVYSLLVK*YNTGYG Trigger: GCCATACCCTGTGTTGTATCATTTGACCAGGAGGGA...GTAGACATTCCGTAAGAGAATCCAGAATGATAGCAGGATCAGGAAAGAAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR-3UTR CCA 90 bp | TCCATTTCTTTCCTGATCCTGCTATCATTCTGGATTCTCTTACGGAATGTCTACTCAAGGTTTCCCTCCTaGTCAAATGATACAACACAG | + |
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Preference number: 2 (lower is better) Translates to: SISFLILLSFWILLRNVYSRFPS*SNDTTQ Trigger: CTGTGTTGTATCATTTGACCAGGAGGGAAACCTTGA...GTAGACATTCCGTAAGAGAATCCAGAATGATAGCAGGATCAGGAAAGAAATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR-3UTR GCA 90 bp | GACAGAGTCAACGTCAACAGCTGCTTGCTTTTTCATCCATTTTATTGTCAGATAATATATGATGCTGTATaGCTGGGGAACAGAATACTG | + |
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Preference number: 2 (lower is better) Translates to: DRVNVNSCLLFHPFYCQIIYDAV*LGNRIL Trigger: CAGTATTCTGTTCCCCAGGCATACAGCATCATATAT...TATCTGACAATAAAATGGATGAAAAAGCAAGCAGCTGTTGACGTTGACTCTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR TCA 72 bp | AGCTTCTGGGAGGAAGGCAGGTGTGAATGCTGGCACTaGTCCAGCCTCCATGCGGCAGGAGGCTTCATGGGG | + |
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Preference number: 3 (lower is better) Translates to: SFWEEGRCECWH*SSLHAAGGFMG Trigger: CCCCATGAAGCCTCCTGCCGCATGGAGGCTGGATCAGTGCCAGCATTCACACCTGCCTTCCTCCCAGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR TCA 72 bp | AATCCCCTGTGCAAGACAGAACGGCCCAGGGCCTGGTaGGCTACCTCACAGCTTCTGGGAGGAAGGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: NPLCKTERPRAW*ATSQLLGGRQV Trigger: CACCTGCCTTCCTCCCAGAAGCTGTGAGGTAGCTCACCAGGCCCTGGGCCGTTCTGTCTTGCACAGGGGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
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| 3UTR TCA 72 bp | AGTGTCTCCCCTATTGATGCAGGCAGGCAGGGAGCCTaGCATGACCATGCCTTGGGACAGCAGGAAGTACCT | + |
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Preference number: 3 (lower is better) Translates to: SVSPIDAGRQGA*HDHALGQQEVP Trigger: AGGTACTTCCTGCTGTCCCAAGGCATGGTCATGTCAGGCTCCCTGCCTGCCTGCATCAATAGGGGAGACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
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| 3UTR CCA 72 bp | GGACTGAGGCCTGTCCCACTTCTCTCCACAGTCATGTaGCTTCTTCCTCACCCCACTCTTACAGACTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: GLRPVPLLSTVM*LLPHPTLTDCH Trigger: GTGGCAGTCTGTAAGAGTGGGGTGAGGAAGAAGCCACATGACTGTGGAGAGAAGTGGGACAGGCCTCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR TCA 72 bp | CTGCCCCTTGGTCCCGGTGTCACCCTTCTTCTCAGATaGAATGACCGCTTTCCTGTGCCCTACACTGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: LPLGPGVTLLLR*NDRFPVPYTVV Trigger: AACCACAGTGTAGGGCACAGGAAAGCGGTCATTTCATCTGAGAAGAAGGGTGACACCGGGACCAAGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
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| 3UTR GCA 72 bp | TACCCACCGCCCTTCCGAAGATCCGCATCCAGCTCTTaGCCAACAAGCTTAAACACACCTCTAGGGACTGAG | + |
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Preference number: 3 (lower is better) Translates to: YPPPFRRSASSS*PTSLNTPLGTE Trigger: CTCAGTCCCTAGAGGTGTGTTTAAGCTTGTTGGGCAAGAGCTGGATGCGGATCTTCGGAAGGGCGGTGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR CCA 72 bp | ATTCAGGCCAGTGGTGCTTCATTTCCAAAAGGCCAGTaGGCAAGGAATCCTAGACTCTGCATCTGGGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: IQASGASFPKGQ*ARNPRLCIWVA Trigger: GGCCACCCAGATGCAGAGTCTAGGATTCCTTGCCCACTGGCCTTTTGGAAATGAAGCACCACTGGCCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR TCA 72 bp | TCAAGAAGTCAGAGTGGCATTCTACAGTCGGATTCCTaGGAACTCGGGATACCCACCGCCCTTCCGAAGATC | + |
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Preference number: 3 (lower is better) Translates to: SRSQSGILQSDS*ELGIPTALPKI Trigger: GATCTTCGGAAGGGCGGTGGGTATCCCGAGTTCTCAGGAATCCGACTGTAGAATGCCACTCTGACTTCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR CCA 72 bp | ATCTGCCTAAAGACAGGACCAACCAGGGCAAGCGTGTaGCTTTCACACTCTCCCTCCACTGTTTCTCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: ICLKTGPTRASV*LSHSPSTVSQV Trigger: CACTTGAGAAACAGTGGAGGGAGAGTGTGAAAGCCACACGCTTGCCCTGGTTGGTCCTGTCTTTAGGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR CCA 72 bp | CAAGGAATCCTAGACTCTGCATCTGGGTGGCCTCAGTaGGCGACATTCCTCTTCTGCTGTGGCTTTAATATA | + |
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Preference number: 3 (lower is better) Translates to: QGILDSASGWPQ*ATFLFCCGFNI Trigger: TATATTAAAGCCACAGCAGAAGAGGAATGTCGCCCACTGAGGCCACCCAGATGCAGAGTCTAGGATTCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR TCA 72 bp | TGGGCGACATTCCTCTTCTGCTGTGGCTTTAATATATaGTGCTGTATGCCTGGGGAACAGAATACTGACCAC | + |
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Preference number: 3 (lower is better) Translates to: WATFLFCCGFNI*CCMPGEQNTDH Trigger: GTGGTCAGTATTCTGTTCCCCAGGCATACAGCATCATATATTAAAGCCACAGCAGAAGAGGAATGTCGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR TCA 72 bp | CAATACAGGGGTCAGGAAAGCTCAGACAGTGGAAAGTaGTTAGAGAACACACCCCAATTCAAGGTTTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: QYRGQESSDSGK*LENTPQFKVSL Trigger: GAGGGAAACCTTGAATTGGGGTGTGTTCTCTAATCACTTTCCACTGTCTGAGCTTTCCTGACCCCTGTATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR TCA 72 bp | AACACACCCCAATTCAAGGTTTCCCTCCTGGTCAAATaGTACAACACAGGGTATGGCAGTAGTTGTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: NTPQFKVSLLVK*YNTGYGSSCGR Trigger: TCTTCCACAACTACTGCCATACCCTGTGTTGTATCATTTGACCAGGAGGGAAACCTTGAATTGGGGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR TCA 72 bp | ATTCACCTTAGAGCAGATTTGGCTCCATTTCTTTCCTaGTCCTGCTATCATTCTGGATTCTCTTACGGAATG | + |
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Preference number: 3 (lower is better) Translates to: IHLRADLAPFLS*SCYHSGFSYGM Trigger: CATTCCGTAAGAGAATCCAGAATGATAGCAGGATCAGGAAAGAAATGGAGCCAAATCTGCTCTAAGGTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| 3UTR CCA 72 bp | TTTGGCTCCATTTCTTTCCTGATCCTGCTATCATTCTaGATTCTCTTACGGAATGTCTACAACATCTCACAG | + |
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Preference number: 3 (lower is better) Translates to: FGSISFLILLSF*ILLRNVYNISQ Trigger: CTGTGAGATGTTGTAGACATTCCGTAAGAGAATCCAGAATGATAGCAGGATCAGGAAAGAAATGGAGCCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTCCCCTATTGATGCAGGCAGGCAGGGAGCCTGACATGACCATGCCTTGGTCAGCCCCGTGGTCATaGGCTCTGGCACCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VSPLLMQAGREPDMTMPWSAPWS*ALAPGA Trigger: TGCTCCAGGTGCCAGAGCCCATGACCACGGGGCTGA...CCAAGGCATGGTCATGTCAGGCTCCCTGCCTGCCTGCATCAATAGGGGAGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
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| CDS-3UTR GCA 90 bp | GCCTCCATGCGGCAGGAGGCTTCATGGGGGACAGAGTCAACGTCAACAGCTGCTCTTGGTCGTGCACTGTaGTCTTATCCAGGCCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: ASMRQEASWGTESTSTAALGRAL*SYPGPR Trigger: GCGTGGGCCTGGATAAGAGCACAGTGCACGACCAAG...AGCAGCTGTTGACGTTGACTCTGTCCCCCATGAAGCCTCCTGCCGCATGGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
||
| CDS-3UTR GCA 90 bp | GCAGGCAGGGAGCCTGACATGACCATGCCTTGGGACAGCAGGAAGTACCTCACACTTGGTCGTGCACTGTaGTCTTATCCAGGCCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: AGREPDMTMPWDSRKYLTLGRAL*SYPGPR Trigger: GCGTGGGCCTGGATAAGAGCACAGTGCACGACCAAG...TGTGAGGTACTTCCTGCTGTCCCAAGGCATGGTCATGTCAGGCTCCCTGCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGTGAATGCTGGCACTGATCCAGCCTCCATGCGGCAGGAGGCTTCATGGATGGGCTCTGGCACCTaGAGCACAAAAGACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGVNAGTDPASMRQEASWMGSGT*STKDPK Trigger: CTTTGGGTCTTTTGTGCTCCAGGTGCCAGAGCCCAT...CCATGAAGCCTCCTGCCGCATGGAGGCTGGATCAGTGCCAGCATTCACACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
||
| CDS-3UTR CCA 90 bp | GGGACTGAGGCCTGTCCCACTTCTCTCCACAGTCATGTGGCTTCTTCCTCACCCCGTGGTCATGGGCTCTaGCACCTGGAGCACAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTEACPTSLHSHVASSSPRGHGL*HLEHKR Trigger: TCTTTTGTGCTCCAGGTGCCAGAGCCCATGACCACG...GGGTGAGGAAGAAGCCACATGACTGTGGAGAGAAGTGGGACAGGCCTCAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCTTTCACACTCTCCCTCCACTGTTTCTCAAGTGTGTCCACTTGGCCAAGCTCAGCCCCGTGGTCATaGGCTCTGGCACCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VAFTLSLHCFSSVSTWPSSAPWS*ALAPGA Trigger: TGCTCCAGGTGCCAGAGCCCATGACCACGGGGCTGA...GCTTGGCCAAGTGGACACACTTGAGAAACAGTGGAGGGAGAGTGTGAAAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTGGGGTGAGGGTGGGATACAGAAACCGGATAATGCTCTGCTGAGGCAGTCAGATGCCCAACCCTaGCTCCTCCTTGACCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: PLWGEGGIQKPDNALLRQSDAQP*LLLDLP Trigger: AGGTAGGTCAAGGAGGAGGCAGGGTTGGGCATCTGA...CTGCCTCAGCAGAGCATTATCCGGTTTCTGTATCCCACCCTCACCCCAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTGGGGTGAGGGTGGGATACAGAAACCGGATAATGCTCTGCTGAGGCAGCACTGTCTACTCAGATaGCCAACCCTGCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLWGEGGIQKPDNALLRQHCLLR*PTLPPP Trigger: AGGAGGAGGCAGGGTTGGGCATCTGAGTAGACAGTG...CTGCCTCAGCAGAGCATTATCCGGTTTCTGTATCCCACCCTCACCCCAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGTGAATGCTGGCACTGATCCAGCCTCCATGCGGCAGGAGGCTTCATGGTCCATGATGTGCTCTTaGTCGTGCACTGTGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGVNAGTDPASMRQEASWSMMCS*SCTVLL Trigger: TAAGAGCACAGTGCACGACCAAGAGCACATCATGGA...CCATGAAGCCTCCTGCCGCATGGAGGCTGGATCAGTGCCAGCATTCACACCTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCACTGTTTCTCAAGTGTGTCCACTTGGCCAAGCAGCCTGTCTTTACTTCTTGGTCGTGCACTGTaGTCTTATCCAGGCCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHCFSSVSTWPSSLSLLLGRAL*SYPGPR Trigger: GCGTGGGCCTGGATAAGAGCACAGTGCACGACCAAG...AAGTAAAGACAGGCTGCTTGGCCAAGTGGACACACTTGAGAAACAGTGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCCATGCGGCAGGAGGCTTCATGGGGGACAGAGTCAACGTCAACAGCTGCTCGTCAAGCAAACTGTTaGCGTCGTAATCATGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASMRQEASWGTESTSTAARQANC*RRNHAF Trigger: AAATGCATGATTACGACGGCAACAGTTTGCTTGACG...AGCAGCTGTTGACGTTGACTCTGTCCCCCATGAAGCCTCCTGCCGCATGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024963.11 |
||
| CDS-3UTR CCA 90 bp | GTGGCTTTCACACTCTCCCTCCACTGTTTCTCAAGTGTGTCCACTTGGCCAAGCATGGGCTCTGGCACCTaGAGCACAAAAGACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAFTLSLHCFSSVSTWPSMGSGT*STKDPK Trigger: CTTTGGGTCTTTTGTGCTCCAGGTGCCAGAGCCCAT...GCTTGGCCAAGTGGACACACTTGAGAAACAGTGGAGGGAGAGTGTGAAAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTGGGGTGAGGGTGGGATACAGAAACCGGATAATGCTCTGCTGAGGCAGTCCATGATGTGCTCTTaGTCGTGCACTGTGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PLWGEGGIQKPDNALLRQSMMCS*SCTVLL Trigger: TAAGAGCACAGTGCACGACCAAGAGCACATCATGGA...CTGCCTCAGCAGAGCATTATCCGGTTTCTGTATCCCACCCTCACCCCAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR CCA 90 bp | TTACCAGACACATCCATCACATTAGCAAGGGTCACATGTGCACAAAGGAAAGAGTCAGCCCCGTGGTCATaGGCTCTGGCACCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPDTSITLARVTCAQRKESAPWS*ALAPGA Trigger: TGCTCCAGGTGCCAGAGCCCATGACCACGGGGCTGA...CTCTTTCCTTTGTGCACATGTGACCCTTGCTAATGTGATGGATGTGTCTGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 |
||
| CDS-3UTR TCA 90 bp | TCAAACTCCAGCTGTAGTGAAAATGTCAACATTTTAGCTTGGGCCAACCAGGCTACCCTGCCTCCTCCTTaGCCTACCTCCTTGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SNSSCSENVNILAWANQATLPPP*PTSLCT Trigger: CGTGCACAAGGAGGTAGGTCAAGGAGGAGGCAGGGT...AGCCTGGTTGGCCCAAGCTAAAATGTTGACATTTTCACTACAGCTGGAGTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR GCA 90 bp | AGACACATCCATCACATTAGCAAGGGTCACATGTGCACAAAGGAAAGAGCCAACCTTGGTCGTGCACTGTaGTCTTATCCAGGCCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: RHIHHISKGHMCTKERANLGRAL*SYPGPR Trigger: GCGTGGGCCTGGATAAGAGCACAGTGCACGACCAAG...GTTGGCTCTTTCCTTTGTGCACATGTGACCCTTGCTAATGTGATGGATGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 |
||
| CDS-3UTR GCA 90 bp | GTGGCTTTCACACTCTCCCTCCACTGTTTCTCAAGTGTGTCCACTTGGCCAAGCAGATGTTCCATGATGTaGTCTTGGTCGTGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAFTLSLHCFSSVSTWPSRCSMM*SWSCTV Trigger: CACAGTGCACGACCAAGAGCACATCATGGAACATCT...GCTTGGCCAAGTGGACACACTTGAGAAACAGTGGAGGGAGAGTGTGAAAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR CCA 90 bp | GGAAATAAGTTGTTTCGCATTACCAGACACATCCATCACATTAGCAAGGGTCACTCAGCCCCGTGGTCATaGGCTCTGGCACCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNKLFRITRHIHHISKGHSAPWS*ALAPGA Trigger: TGCTCCAGGTGCCAGAGCCCATGACCACGGGGCTGA...GTGACCCTTGCTAATGTGATGGATGTGTCTGGTAATGCGAAACAACTTATTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTGGCTTTAATATATGATGCTGTATGCCTGGGGAACAGAATACTGACCACAACAGCAAGGGAGCTCTaGGCAGCTGTAGGGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVALIYDAVCLGNRILTTTAREL*AAVGLP Trigger: TGGCAACCCTACAGCTGCTCAGAGCTCCCTTGCTGT...TGTGGTCAGTATTCTGTTCCCCAGGCATACAGCATCATATATTAAAGCCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR TCA 90 bp | TCAAACTCCAGCTGTAGTGAAAATGTCAACATTTTAGCTTGGGCCAACCAGGCTACAGCAAGGGAGCTCTaGGCAGCTGTAGGGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSSCSENVNILAWANQATAREL*AAVGLP Trigger: TGGCAACCCTACAGCTGCTCAGAGCTCCCTTGCTGT...AGCCTGGTTGGCCCAAGCTAAAATGTTGACATTTTCACTACAGCTGGAGTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR TCA 90 bp | GGAAATAAGTTGTTTCGCATTACCAGACACATCCATCACATTAGCAAGGGTCACACAGCAAGGGAGCTCTaGGCAGCTGTAGGGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNKLFRITRHIHHISKGHTAREL*AAVGLP Trigger: TGGCAACCCTACAGCTGCTCAGAGCTCCCTTGCTGT...GTGACCCTTGCTAATGTGATGGATGTGTCTGGTAATGCGAAACAACTTATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTACAACCTGTGGCAGCTTCTCTTTCAGCTACTACTGAGGTTCACAACGCTATGTGCTCTTGGTCGTaGACTGTGCTCTTATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVQPVAASLSATTEVHNAMCSWS*TVLLSR Trigger: CCTGGATAAGAGCACAGTGCACGACCAAGAGCACAT...AGCGTTGTGAACCTCAGTAGTAGCTGAAAGAGAAGCTGCCACAGGTTGTACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR GCA 90 bp | GCCGGACCCTCAAACTCCAGCTGTAGTGAAAATGTCAACATTTTAGCTTGGGCCAGATGTTCCATGATGTaGTCTTGGTCGTGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGPSNSSCSENVNILAWARCSMM*SWSCTV Trigger: CACAGTGCACGACCAAGAGCACATCATGGAACATCT...GGCCCAAGCTAAAATGTTGACATTTTCACTACAGCTGGAGTTTGAGGGTCCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR TCA 90 bp | TCCATTTCTTTCCTGATCCTGCTATCATTCTGGATTCTCTTACGGAATGTCTACACAGCAAGGGAGCTCTaGGCAGCTGTAGGGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SISFLILLSFWILLRNVYTAREL*AAVGLP Trigger: TGGCAACCCTACAGCTGCTCAGAGCTCCCTTGCTGT...GTAGACATTCCGTAAGAGAATCCAGAATGATAGCAGGATCAGGAAAGAAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR CCA 90 bp | TTACCAGACACATCCATCACATTAGCAAGGGTCACATGTGCACAAAGGAAAGAGATGGGCTCTGGCACCTaGAGCACAAAAGACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPDTSITLARVTCAQRKEMGSGT*STKDPK Trigger: CTTTGGGTCTTTTGTGCTCCAGGTGCCAGAGCCCAT...CTCTTTCCTTTGTGCACATGTGACCCTTGCTAATGTGATGGATGTGTCTGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 |
||
| CDS-3UTR CCA 90 bp | TCAAACTCCAGCTGTAGTGAAAATGTCAACATTTTAGCTTGGGCCAACCAGGCTATGGGCTCTGGCACCTaGAGCACAAAAGACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNSSCSENVNILAWANQAMGSGT*STKDPK Trigger: CTTTGGGTCTTTTGTGCTCCAGGTGCCAGAGCCCAT...AGCCTGGTTGGCCCAAGCTAAAATGTTGACATTTTCACTACAGCTGGAGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR GCA 90 bp | GCCGGACCCTCAAACTCCAGCTGTAGTGAAAATGTCAACATTTTAGCTTGGGCCCGTCAAGCAAACTGTTaGCGTCGTAATCATGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AGPSNSSCSENVNILAWARQANC*RRNHAF Trigger: AAATGCATGATTACGACGGCAACAGTTTGCTTGACG...GGCCCAAGCTAAAATGTTGACATTTTCACTACAGCTGGAGTTTGAGGGTCCGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR GCA 90 bp | GGAAATAAGTTGTTTCGCATTACCAGACACATCCATCACATTAGCAAGGGTCACAGATGTTCCATGATGTaGTCTTGGTCGTGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNKLFRITRHIHHISKGHRCSMM*SWSCTV Trigger: CACAGTGCACGACCAAGAGCACATCATGGAACATCT...GTGACCCTTGCTAATGTGATGGATGTGTCTGGTAATGCGAAACAACTTATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 |
||
| CDS-3UTR GCA 90 bp | AGACACATCCATCACATTAGCAAGGGTCACATGTGCACAAAGGAAAGAGCCAACCGTCAAGCAAACTGTTaGCGTCGTAATCATGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RHIHHISKGHMCTKERANRQANC*RRNHAF Trigger: AAATGCATGATTACGACGGCAACAGTTTGCTTGACG...GTTGGCTCTTTCCTTTGTGCACATGTGACCCTTGCTAATGTGATGGATGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 |
||
| CDS-3UTR CCA 90 bp | GGAAATAAGTTGTTTCGCATTACCAGACACATCCATCACATTAGCAAGGGTCACTCCATGATGTGCTCTTaGTCGTGCACTGTGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GNKLFRITRHIHHISKGHSMMCS*SCTVLL Trigger: TAAGAGCACAGTGCACGACCAAGAGCACATCATGGA...GTGACCCTTGCTAATGTGATGGATGTGTCTGGTAATGCGAAACAACTTATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGATCCTGCTATCATTCTGGATTCTCTTACGGAATGTCTACAACATCTCAGATGTTCCATGATGTaGTCTTGGTCGTGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPDPAIILDSLTECLQHLRCSMM*SWSCTV Trigger: CACAGTGCACGACCAAGAGCACATCATGGAACATCT...GAGATGTTGTAGACATTCCGTAAGAGAATCCAGAATGATAGCAGGATCAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGCTTTAATATATGATGCTGTATGCCTGGGGAACAGAATACTGACCACACGTCAAGCAAACTGTTaGCGTCGTAATCATGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AVALIYDAVCLGNRILTTRQANC*RRNHAF Trigger: AAATGCATGATTACGACGGCAACAGTTTGCTTGACG...TGTGGTCAGTATTCTGTTCCCCAGGCATACAGCATCATATATTAAAGCCACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGATCCTGCTATCATTCTGGATTCTCTTACGGAATGTCTACAACATCTCTCCATGATGTGCTCTTaGTCGTGCACTGTGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FPDPAIILDSLTECLQHLSMMCS*SCTVLL Trigger: TAAGAGCACAGTGCACGACCAAGAGCACATCATGGA...GAGATGTTGTAGACATTCCGTAAGAGAATCCAGAATGATAGCAGGATCAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS TCA 90 bp | TGCTCTTGGTCGTGCACTGTGCTCTTATCCAGGCCCACGCTGCCATaGTGGACATCAGCCCCGTGGTCATGGGCTCTGGCACCTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CSWSCTVLLSRPTLP*WTSAPWSWALAPGA Trigger: TGCTCCAGGTGCCAGAGCCCATGACCACGGGGCTGATGTCCATCATGGCAGCGTGGGCCTGGATAAGAGCACAGTGCACGACCAAGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 ENSMUST00000145895.8 ENSMUST00000151155.8 ENSMUST00000155904.2 |
||
| CDS CCA 90 bp | GGCCCACGCTGCCATGATGGACATCAGCCCCGTGGTCATGGGCTCTaGCACCTGGAGCACAAAAGACCCAAAGCAGGACACACAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPRCHDGHQPRGHGL*HLEHKRPKAGHTAR Trigger: CCTTGCTGTGTGTCCTGCTTTGGGTCTTTTGTGCTCCAGGTGCCAGAGCCCATGACCACGGGGCTGATGTCCATCATGGCAGCGTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 ENSMUST00000145895.8 ENSMUST00000151155.8 ENSMUST00000155904.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTCTGGGGTGAGGGTGGGATACAGAAACCGGATAATGCTCTGCTGAGGCAGAACCCTGCCTCCTCCTaGACCTACCTCCTTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLWGEGGIQKPDNALLRQNPASS*TYLLVH Trigger: GTGCACAAGGAGGTAGGTCAAGGAGGAGGCAGGGTT...CTGCCTCAGCAGAGCATTATCCGGTTTCTGTATCCCACCCTCACCCCAGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCTCCCCTATTGATGCAGGCAGGCAGGGAGCCTGACATGACCATGCCTTGGTTCCATGATGTGCTCTaGGTCGTGCACTGTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSPLLMQAGREPDMTMPWFHDVL*VVHCAL Trigger: AAGAGCACAGTGCACGACCAAGAGCACATCATGGAA...CCAAGGCATGGTCATGTCAGGCTCCCTGCCTGCCTGCATCAATAGGGGAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS-3UTR CAA 90 bp | GCATCTGGGTGGCCTCAGTGGGCGACATTCCTCTTCTGCTGTGGCTTTAATATATTCCATGATGTGCTCTaGGTCGTGCACTGTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASGWPQWATFLFCCGFNIFHDVL*VVHCAL Trigger: AAGAGCACAGTGCACGACCAAGAGCACATCATGGAA...TATATTAAAGCCACAGCAGAAGAGGAATGTCGCCCACTGAGGCCACCCAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCACTGTTTCTCAAGTGTGTCCACTTGGCCAAGCAGCCTGTCTTTACTTTTCCATGATGTGCTCTaGGTCGTGCACTGTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLHCFSSVSTWPSSLSLLFHDVL*VVHCAL Trigger: AAGAGCACAGTGCACGACCAAGAGCACATCATGGAA...AAGTAAAGACAGGCTGCTTGGCCAAGTGGACACACTTGAGAAACAGTGGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024963.11 ENSMUST00000144236.9 |
||
| CDS-3UTR CAA 90 bp | AGACACATCCATCACATTAGCAAGGGTCACATGTGCACAAAGGAAAGAGCCAACTTCCATGATGTGCTCTaGGTCGTGCACTGTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RHIHHISKGHMCTKERANFHDVL*VVHCAL Trigger: AAGAGCACAGTGCACGACCAAGAGCACATCATGGAA...GTTGGCTCTTTCCTTTGTGCACATGTGACCCTTGCTAATGTGATGGATGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 |
||
| CDS TCA 72 bp | TCGTGCACTGTGCTCTTATCCAGGCCCACGCTGCCATaGTGGACATCAGCCCCGTGGTCATGGGCTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SCTVLLSRPTLP*WTSAPWSWALA Trigger: TGCCAGAGCCCATGACCACGGGGCTGATGTCCATCATGGCAGCGTGGGCCTGGATAAGAGCACAGTGCACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 ENSMUST00000145895.8 ENSMUST00000151155.8 ENSMUST00000155904.2 |
||
| CDS GCA 72 bp | CTTGGTCGTGCACTGTGCTCTTATCCAGGCCCACGCTaGCATGATGGACATCAGCCCCGTGGTCATGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGRALCSYPGPR*HDGHQPRGHGL Trigger: GAGCCCATGACCACGGGGCTGATGTCCATCATGGCAGCGTGGGCCTGGATAAGAGCACAGTGCACGACCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 ENSMUST00000145895.8 ENSMUST00000151155.8 ENSMUST00000155904.2 |
||
| CDS GCA 72 bp | ACCAGCGTGGGCACTGTCTACTCAGATGCCCAACCCTaGCTCCTCCTTGACCTACCTCCTTGTGCACGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TSVGTVYSDAQP*LLLDLPPCARE Trigger: CTCACGTGCACAAGGAGGTAGGTCAAGGAGGAGGCAGGGTTGGGCATCTGAGTAGACAGTGCCCACGCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
||
| CDS CCA 72 bp | TGCCATGATGGACATCAGCCCCGTGGTCATGGGCTCTaGCACCTGGAGCACAAAAGACCCAAAGCAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: CHDGHQPRGHGL*HLEHKRPKAGH Trigger: GTGTCCTGCTTTGGGTCTTTTGTGCTCCAGGTGCCAGAGCCCATGACCACGGGGCTGATGTCCATCATGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 ENSMUST00000145895.8 ENSMUST00000151155.8 ENSMUST00000155904.2 |
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| CDS CCA 72 bp | ATGGACATCAGCCCCGTGGTCATGGGCTCTGGCACCTaGAGCACAAAAGACCCAAAGCAGGACACACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: MDISPVVMGSGT*STKDPKQDTQQ Trigger: TTGCTGTGTGTCCTGCTTTGGGTCTTTTGTGCTCCAGGTGCCAGAGCCCATGACCACGGGGCTGATGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024963.11 ENSMUST00000129616.8 ENSMUST00000144236.9 ENSMUST00000145895.8 ENSMUST00000151155.8 ENSMUST00000155904.2 |
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| CDS TCA 72 bp | TGCCTCCTCCTTGACCTACCTCCTTGTGCACGTGAGTaGTGGCTATGGAGAGCTCTAGGCCGTCAAGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: CLLLDLPPCARE*WLWRALGRQAN Trigger: GTTTGCTTGACGGCCTAGAGCTCTCCATAGCCATCACTCACGTGCACAAGGAGGTAGGTCAAGGAGGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145895.8 |
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