Pregenerated sensors for MCEMP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013974Ensembl transcript IDs: ENSMUST00000014118.4
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCAGCCTCTCAAGCGATGGAATTACAGTCCAGCTGCACCATGTCTaGCTTCCAGGACTGGGTGTTTTGTTTCATCACCAAACCAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: ISLSSDGITVQLHHV*LPGLGVLFHHQTKA Trigger: GGCTTTGGTTTGGTGATGAAACAAAACACCCAGTCCTGGAAGCCAGACATGGTGCAGCTGGACTGTAATTCCATCGCTTGAGAGGCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR CCA 90 bp | ACCAGGACATGCCTATACTCACATAAGCCAGGGCATACACCTATGTaGCCCATAAAGAGTAACACCTGCTGTGACTGCCATGTTCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: TRTCLYSHKPGHTPM*PIKSNTCCDCHVLF Trigger: AAAGAGAACATGGCAGTCACAGCAGGTGTTACTCTTTATGGGCCACATAGGTGTATGCCCTGGCTTATGTGAGTATAGGCATGTCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR TCA 90 bp | CACCACTTCAGTGACACACATACAGAACAGCCAGATGCACATACATaGGCAAGAGAATGGGGAGGCATGTCCTACATGTCACTTACACTT | + |
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Preference number: 1 (lower is better) Translates to: HHFSDTHTEQPDAHT*AREWGGMSYMSLTL Trigger: AAGTGTAAGTGACATGTAGGACATGCCTCCCCATTCTCTTGCTCATGTATGTGCATCTGGCTGTTCTGTATGTGTGTCACTGAAGTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR GCA 90 bp | CTTTCCACCATAAACCCTTCTCCTGGAATACATGGAAACCCCAAATaGTCATTTGCATACACACCTCTTCAACACTCATTCCCCCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: LSTINPSPGIHGNPK*SFAYTPLQHSFPLV Trigger: CACCAGGGGGAATGAGTGTTGAAGAGGTGTGTATGCAAATGAGCATTTGGGGTTTCCATGTATTCCAGGAGAAGGGTTTATGGTGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR CCA 90 bp | CCTGCTGTGACTGCCATGTTCTCTTTCCACCATAAACCCTTCTCCTaGAATACATGGAAACCCCAAATGCTCATTTGCATACACACCTCT | + |
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Preference number: 1 (lower is better) Translates to: PAVTAMFSFHHKPFS*NTWKPQMLICIHTS Trigger: AGAGGTGTGTATGCAAATGAGCATTTGGGGTTTCCATGTATTCCAGGAGAAGGGTTTATGGTGGAAAGAGAACATGGCAGTCACAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR TCA 90 bp | TTGTGTCTTTCATTCACCTTGGTGTGCAGGTGGGGCTCCCACTGTGTGGACCCCGACACATCTCCAGGGTaGTGTCTATCACCCACCACT | + |
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Preference number: 2 (lower is better) Translates to: LCLSFTLVCRWGSHCVDPDTSPG*CLSPTT Trigger: AGTGGTGGGTGATAGACATCACCCTGGAGATGTGTC...GGGGTCCACACAGTGGGAGCCCCACCTGCACACCAAGGTGAATGAAAGACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR TCA 90 bp | CCTCGGTGCATTTTGCATGCTGAGCCATCTCACTACCCTACCCCAGCTCTACTTCCAGATGCACATACATaGGCAAGAGAATGGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PRCILHAEPSHYPTPALLPDAHT*AREWGG Trigger: GCCTCCCCATTCTCTTGCTCATGTATGTGCATCTGG...AAGTAGAGCTGGGGTAGGGTAGTGAGATGGCTCAGCATGCAAAATGCACCGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR GCA 90 bp | CCTCGGTGCATTTTGCATGCTGAGCCATCTCACTACCCTACCCCAGCTCTACTTAACACCTGCTGTGACTaGCATGTTCTCTTTCCACCA | + |
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Preference number: 2 (lower is better) Translates to: PRCILHAEPSHYPTPALLNTCCD*HVLFPP Trigger: TGGTGGAAAGAGAACATGGCAGTCACAGCAGGTGTT...AAGTAGAGCTGGGGTAGGGTAGTGAGATGGCTCAGCATGCAAAATGCACCGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR GCA 90 bp | CAATCAGCCTCTCAAGCGATGGAATTACAGTCCAGCTGCACCATGTCTGGCTTCACTAGGAATGACCCATaGCATGACACATCTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QSASQAMELQSSCTMSGFTRNDP*HDTSPG Trigger: CCCTGGAGATGTGTCATGGCATGGGTCATTCCTAGT...GAAGCCAGACATGGTGCAGCTGGACTGTAATTCCATCGCTTGAGAGGCTGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR TCA 90 bp | GCAGAAATCGATGGCTACATTTGTGTGCATGCCCTGAACACACAAGCTGACATGCACCCACCACTTCAGTaGCACACATACAGAACAGCC | + |
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Preference number: 2 (lower is better) Translates to: AEIDGYICVHALNTQADMHPPLQ*HTYRTA Trigger: GGCTGTTCTGTATGTGTGTCACTGAAGTGGTGGGTG...CATGTCAGCTTGTGTGTTCAGGGCATGCACACAAATGTAGCCATCGATTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR CCA 90 bp | AGTATTGTGTCTTTCATTCACCTTGGTGTGCAGGTGGGGCTCCCACTGTGTGGAGGGCATACACCTATGTaGCCCATAAAGAGTAACACC | + |
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Preference number: 2 (lower is better) Translates to: SIVSFIHLGVQVGLPLCGGHTPM*PIKSNT Trigger: GGTGTTACTCTTTATGGGCCACATAGGTGTATGCCC...TCCACACAGTGGGAGCCCCACCTGCACACCAAGGTGAATGAAAGACACAATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR GCA 90 bp | CAGAACAGCCAGATGCACATACATGAGCAAGAGAATGGGGAGGCATGTCCTACAATCTTCACTAGCAGGTaGAATTCGGAGTCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: QNSQMHIHEQENGEACPTIFTSR*NSESSQ Trigger: CTGTGAAGACTCCGAATTGCACCTGCTAGTGAAGAT...TGTAGGACATGCCTCCCCATTCTCTTGCTCATGTATGTGCATCTGGCTGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR TCA 90 bp | TCACTACCCTACCCCAGCTCTACTTTTGTAGCCAGAGCTGACCTTGAACTCATGACACACAAGCTGACATaGCCAAAAACACTAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: SLPYPSSTFVARADLELMTHKLT*PKTLGM Trigger: CATTCCTAGTGTTTTTGGTCATGTCAGCTTGTGTGT...CATGAGTTCAAGGTCAGCTCTGGCTACAAAAGTAGAGCTGGGGTAGGGTAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR GCA 90 bp | AGTTCTGTCCCACAGGCCTCCCCAAAACAGCTCCAGAGTCATATCATTTCCCTTCATGGAAACCCCAAATaGTCATTTGCATACACACCT | + |
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Preference number: 2 (lower is better) Translates to: SSVPQASPKQLQSHIISLHGNPK*SFAYTP Trigger: AGGTGTGTATGCAAATGAGCATTTGGGGTTTCCATG...AAGGGAAATGATATGACTCTGGAGCTGTTTTGGGGAGGCCTGTGGGACAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR CCA 90 bp | CAGAACAGCCAGATGCACATACATGAGCAAGAGAATGGGGAGGCATGTCCTACACATAAACCCTTCTCCTaGAATACATGGAAACCCCAA | + |
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Preference number: 2 (lower is better) Translates to: QNSQMHIHEQENGEACPTHKPFS*NTWKPQ Trigger: TTGGGGTTTCCATGTATTCCAGGAGAAGGGTTTATG...TGTAGGACATGCCTCCCCATTCTCTTGCTCATGTATGTGCATCTGGCTGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGAAATCGATGGCTACATTTGTGTGCATGCCCTGAACACACAAGCTGACATGATGTCACTTACACTTTaGGGACTTCTCGGGAATAGC | + |
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Preference number: 2 (lower is better) Translates to: AEIDGYICVHALNTQADMMSLTL*GLLGNS Trigger: GCTATTCCCGAGAAGTCCCCAAAGTGTAAGTGACAT...CATGTCAGCTTGTGTGTTCAGGGCATGCACACAAATGTAGCCATCGATTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR CAA 90 bp | TCCCACAGGCCTCCCCAAAACAGCTCCAGAGTCATATCATTTCCCTaGGCATTTATCTTCTTGAATCATAAATACAAGTGCAGAAATCGA | + |
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Preference number: 2 (lower is better) Translates to: SHRPPQNSSRVISFP*AFIFLNHKYKCRNR Trigger: TCGATTTCTGCACTTGTATTTATGATTCAAGAAGATAAATGCCAAGGGAAATGATATGACTCTGGAGCTGTTTTGGGGAGGCCTGTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR-3UTR CCA 90 bp | TACATTTGTGTGCATGCCCTGAACACACAAGCTGACATGACCAAAAACACTAGGTTCTCCTGGAATACATaGAAACCCCAAATGCTCATT | + |
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Preference number: 2 (lower is better) Translates to: YICVHALNTQADMTKNTRFSWNT*KPQMLI Trigger: AATGAGCATTTGGGGTTTCCATGTATTCCAGGAGAA...CCTAGTGTTTTTGGTCATGTCAGCTTGTGTGTTCAGGGCATGCACACAAATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR CAA 90 bp | CAAAACAGCTCCAGAGTCATATCATTTCCCTTGGCATTTATCTTCTaGAATCATAAATACAAGTGCAGAAATCGATGGCTACATTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QNSSRVISFPLAFIF*NHKYKCRNRWLHLC Trigger: ACACAAATGTAGCCATCGATTTCTGCACTTGTATTTATGATTCAAGAAGATAAATGCCAAGGGAAATGATATGACTCTGGAGCTGTTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR GCA 72 bp | CAGTACCCACCCCCATCTGCCATCTTCACTAGCAGGTaGAATTCGGAGTCTTCACAGGTACTGCTGTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: QYPPPSAIFTSR*NSESSQVLLWC Trigger: ACACCACAGCAGTACCTGTGAAGACTCCGAATTGCACCTGCTAGTGAAGATGGCAGATGGGGGTGGGTACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR TCA 72 bp | CATCTCCAGGGTGATGTCTATCACCCACCACTTCAGTaGCACACATACAGAACAGCCAGATGCACATACATG | + |
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Preference number: 3 (lower is better) Translates to: HLQGDVYHPPLQ*HTYRTARCTYM Trigger: CATGTATGTGCATCTGGCTGTTCTGTATGTGTGTCACTGAAGTGGTGGGTGATAGACATCACCCTGGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR TCA 72 bp | ACTAGGAATGACCCATGCCATGACACATCTCCAGGGTaGTGTCTATCACCCACCACTTCAGTGACACACATA | + |
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Preference number: 3 (lower is better) Translates to: TRNDPCHDTSPG*CLSPTTSVTHI Trigger: TATGTGTGTCACTGAAGTGGTGGGTGATAGACATCACCCTGGAGATGTGTCATGGCATGGGTCATTCCTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR CCA 72 bp | TGCCTATACTCACATAAGCCAGGGCATACACCTATGTaGCCCATAAAGAGTAACACCTGCTGTGACTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: CLYSHKPGHTPM*PIKSNTCCDCH Trigger: ATGGCAGTCACAGCAGGTGTTACTCTTTATGGGCCACATAGGTGTATGCCCTGGCTTATGTGAGTATAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR CCA 72 bp | TCAAGCGATGGAATTACAGTCCAGCTGCACCATGTCTaGCTTCCAGGACTGGGTGTTTTGTTTCATCACCAA | + |
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Preference number: 3 (lower is better) Translates to: SSDGITVQLHHV*LPGLGVLFHHQ Trigger: TTGGTGATGAAACAAAACACCCAGTCCTGGAAGCCAGACATGGTGCAGCTGGACTGTAATTCCATCGCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR TCA 72 bp | AGTGACACACATACAGAACAGCCAGATGCACATACATaGGCAAGAGAATGGGGAGGCATGTCCTACATGTCA | + |
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Preference number: 3 (lower is better) Translates to: SDTHTEQPDAHT*AREWGGMSYMS Trigger: TGACATGTAGGACATGCCTCCCCATTCTCTTGCTCATGTATGTGCATCTGGCTGTTCTGTATGTGTGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR GCA 72 bp | TTCTCCTGGAATACATGGAAACCCCAAATGCTCATTTaGATACACACCTCTTCAACACTCATTCCCCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: FSWNTWKPQMLI*IHTSSTLIPPG Trigger: ACCAGGGGGAATGAGTGTTGAAGAGGTGTGTATGCAAATGAGCATTTGGGGTTTCCATGTATTCCAGGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR CCA 72 bp | ACTGCCATGTTCTCTTTCCACCATAAACCCTTCTCCTaGAATACATGGAAACCCCAAATGCTCATTTGCATA | + |
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Preference number: 3 (lower is better) Translates to: TAMFSFHHKPFS*NTWKPQMLICI Trigger: TATGCAAATGAGCATTTGGGGTTTCCATGTATTCCAGGAGAAGGGTTTATGGTGGAAAGAGAACATGGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR GCA 72 bp | ATAAACCCTTCTCCTGGAATACATGGAAACCCCAAATaGTCATTTGCATACACACCTCTTCAACACTCATTC | + |
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Preference number: 3 (lower is better) Translates to: INPSPGIHGNPK*SFAYTPLQHSF Trigger: GAATGAGTGTTGAAGAGGTGTGTATGCAAATGAGCATTTGGGGTTTCCATGTATTCCAGGAGAAGGGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR GCA 72 bp | CCCTTGGCATTTATCTTCTTGAATCATAAATACAAGTaGAGAAATCGATGGCTACATTTGTGTGCATGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PLAFIFLNHKYK*RNRWLHLCACP Trigger: AGGGCATGCACACAAATGTAGCCATCGATTTCTGCACTTGTATTTATGATTCAAGAAGATAAATGCCAAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CCA 90 bp | AGAATGGGGAGGCATGTCCTACATGTCACTTACACTTTGGGGACTTCTCGGGAAAGGCGGGGACTCAGCTaGGTCCAGGGATGTCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: RMGRHVLHVTYTLGTSRERRGLS*VQGCLE Trigger: TTCAAGACATCCCTGGACCCAGCTGAGTCCCCGCCT...TTCCCGAGAAGTCCCCAAAGTGTAAGTGACATGTAGGACATGCCTCCCCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR TCA 90 bp | CCCAAAGTTCTGTCCCACAGGCCTCCCCAAAACAGCTCCAGAGTCATATCATTTCAAATCCTCGTTTGCTaGTTCTGGAGCTCCCGGATA | + |
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Preference number: 4 (lower is better) Translates to: PKVLSHRPPQNSSRVISFQILVC*FWSSRI Trigger: TATCCGGGAGCTCCAGAATCAGCAAACGAGGATTTG...AAATGATATGACTCTGGAGCTGTTTTGGGGAGGCCTGTGGGACAGAACTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR TCA 90 bp | CCAAAGTTCTGTCCCACAGGCCTCCCCAAAACAGCTCCAGAGTCATATCATTTCTCTGGATGCTACTCATaGCTGTGCCAAGGGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PKFCPTGLPKTAPESYHFSGCYS*LCQGSS Trigger: AGAAGACCCTTGGCACAGTCATGAGTAGCATCCAGA...GAAATGATATGACTCTGGAGCTGTTTTGGGGAGGCCTGTGGGACAGAACTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR GCA 90 bp | AGTATTGTGTCTTTCATTCACCTTGGTGTGCAGGTGGGGCTCCCACTGTGTGGAAACATTCGAAAGCTCTaGTTTCAAGGTCCACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SIVSFIHLGVQVGLPLCGNIRKL*FQGPQL Trigger: GAGCTGTGGACCTTGAAAGCAGAGCTTTCGAATGTT...TCCACACAGTGGGAGCCCCACCTGCACACCAAGGTGAATGAAAGACACAATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR TCA 90 bp | CAATCAGCCTCTCAAGCGATGGAATTACAGTCCAGCTGCACCATGTCTGGCTTCTTGTTTTGTGGGTGTTaGTTGGCTGAGTTTGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: QSASQAMELQSSCTMSGFLFCGC*LAEFEL Trigger: CAACTCAAACTCAGCCAATCAACACCCACAAAACAA...GAAGCCAGACATGGTGCAGCTGGACTGTAATTCCATCGCTTGAGAGGCTGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CCA 90 bp | GGAATTACAGTCCAGCTGCACCATGTCTGGCTTCCAGGACTGGGTGTTTTGTTTTTTGTGGGTGTTGATTaGCTGAGTTTGAGTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GITVQLHHVWLPGLGVLFFVGVD*LSLSWS Trigger: GGACCAACTCAAACTCAGCCAATCAACACCCACAAA...AAACAAAACACCCAGTCCTGGAAGCCAGACATGGTGCAGCTGGACTGTAATTCC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CCA 90 bp | AGTACCCACCCCCATCTGCCATCTTCACTAGCAGGTGCAATTCGGAGTCTTCACAGAGTTTTCTTGATTTaGGTTATATCTGCCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: STHPHLPSSLAGAIRSLHRVFLI*VISAGT Trigger: TGTGCCGGCAGATATAACCCAAATCAAGAAAACTCT...GTGAAGACTCCGAATTGCACCTGCTAGTGAAGATGGCAGATGGGGGTGGGTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR TCA 90 bp | CCCAAAGTTCTGTCCCACAGGCCTCCCCAAAACAGCTCCAGAGTCATATCATTTCCTCAAGAGTTTTCTTaGTTTGGGTTATATCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: PKVLSHRPPQNSSRVISFPQEFS*FGLYLP Trigger: CGGCAGATATAACCCAAATCAAGAAAACTCTTGAGG...AAATGATATGACTCTGGAGCTGTTTTGGGGAGGCCTGTGGGACAGAACTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR GCA 90 bp | ATCTCCAGGGTGATGTCTATCACCCACCACTTCAGTGACACACATACAGAACAGAAGCAGAGAGGACGATaGAGGATAAAAAGACGAGAG | + |
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Preference number: 4 (lower is better) Translates to: ISRVMSITHHFSDTHTEQKQRGR*RIKRRE Trigger: CTCTCGTCTTTTTATCCTGCATCGTCCTCTCTGCTT...CTGTTCTGTATGTGTGTCACTGAAGTGGTGGGTGATAGACATCACCCTGGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CCA 90 bp | AAGTTCTGTCCCACAGGCCTCCCCAAAACAGCTCCAGAGTCATATCATTTCCCTAGGTCCACAGCTCCTTaGACATCTCAGAATTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: KFCPTGLPKTAPESYHFPRSTAP*TSQNFS Trigger: TGAAAAATTCTGAGATGTCCAAGGAGCTGTGGACCT...AGGGAAATGATATGACTCTGGAGCTGTTTTGGGGAGGCCTGTGGGACAGAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| 3UTR CAA 72 bp | CTTCTCCTGGAATACATGGAAACCCCAAATGCTCATTaGCATACACACCTCTTCAACACTCATTCCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLLEYMETPNAH*HTHLFNTHSPW Trigger: CCAGGGGGAATGAGTGTTGAAGAGGTGTGTATGCAAATGAGCATTTGGGGTTTCCATGTATTCCAGGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CCA 90 bp | TACATTTGTGTGCATGCCCTGAACACACAAGCTGACATGACCAAAAACACTAGGTGGCTGAGTTTGAGTTaGTCCTTGTTTCTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: YICVHALNTQADMTKNTRWLSLS*SLFLKA Trigger: GGCCTTCAGAAACAAGGACCAACTCAAACTCAGCCA...CCTAGTGTTTTTGGTCATGTCAGCTTGTGTGTTCAGGGCATGCACACAAATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CAA 90 bp | CAATCAGCCTCTCAAGCGATGGAATTACAGTCCAGCTGCACCATGTCTGGCTTCGTCTTCTTGACCTCCTaGATGTCCCCCTGGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: QSASQAMELQSSCTMSGFVFLTS*MSPWAA Trigger: AGCTGCCCAGGGGGACATCAAGGAGGTCAAGAAGAC...GAAGCCAGACATGGTGCAGCTGGACTGTAATTCCATCGCTTGAGAGGCTGATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CCA 90 bp | TGGGTTATATCTGCCGGCACAGTCTTCAGCCGGTCGTTTCCAGTCTaGATGCTACTCATGACTGTGCCAAGGGTCTTCTTGACCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: WVISAGTVFSRSFPV*MLLMTVPRVFLTSL Trigger: CAAGGAGGTCAAGAAGACCCTTGGCACAGTCATGAGTAGCATCCAGACTGGAAACGACCGGCTGAAGACTGTGCCGGCAGATATAACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CAA 90 bp | TGTCCCACAGGCCTCCCCAAAACAGCTCCAGAGTCATATCATTTCCCTTGGCATGGGTCCAGGGATGTCTaGAACTTGGCTTGTTTTGTG | + |
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Preference number: 5 (lower is better) Translates to: CPTGLPKTAPESYHFPWHGSRDV*NLACFV Trigger: CACAAAACAAGCCAAGTTCAAGACATCCCTGGACCC...ATGCCAAGGGAAATGATATGACTCTGGAGCTGTTTTGGGGAGGCCTGTGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CAA 90 bp | CAATCAGCCTCTCAAGCGATGGAATTACAGTCCAGCTGCACCATGTCTGGCTTCTTGGCTGAGTTTGAGTaGGTCCTTGTTTCTGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: QSASQAMELQSSCTMSGFLAEFE*VLVSEG Trigger: GCCTTCAGAAACAAGGACCAACTCAAACTCAGCCAA...GAAGCCAGACATGGTGCAGCTGGACTGTAATTCCATCGCTTGAGAGGCTGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS TCA 90 bp | AGCTGGGTCCAGGGATGTCTTGAACTTGGCTTGTTTTGTGGGTGTTaGTTGGCTGAGTTTGAGTTGGTCCTTGTTTCTGAAGGCCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: SWVQGCLELGLFCGC*LAEFELVLVSEGQG Trigger: ACCTTGGCCTTCAGAAACAAGGACCAACTCAAACTCAGCCAATCAACACCCACAAAACAAGCCAAGTTCAAGACATCCCTGGACCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CAA 90 bp | TGTCCCACAGGCCTCCCCAAAACAGCTCCAGAGTCATATCATTTCCCTTGGCATGTTGATTGGCTGAGTTaGAGTTGGTCCTTGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: CPTGLPKTAPESYHFPWHVDWLS*SWSLFL Trigger: CAGAAACAAGGACCAACTCAAACTCAGCCAATCAAC...ATGCCAAGGGAAATGATATGACTCTGGAGCTGTTTTGGGGAGGCCTGTGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CAA 90 bp | TGTCTATCACCCACCACTTCAGTGACACACATACAGAACAGCCAGATGCACATATTCCCAAATCCTCGTTaGCTGATTCTGGAGCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: CLSPTTSVTHIQNSQMHIFPNPR*LILELP Trigger: CGGGAGCTCCAGAATCAGCAAACGAGGATTTGGGAA...TATGTGCATCTGGCTGTTCTGTATGTGTGTCACTGAAGTGGTGGGTGATAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CCA 90 bp | GGGTCCAGGGATGTCTTGAACTTGGCTTGTTTTGTGGGTGTTGATTaGCTGAGTTTGAGTTGGTCCTTGTTTCTGAAGGCCAAGGTTATA | + |
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Preference number: 5 (lower is better) Translates to: GSRDVLNLACFVGVD*LSLSWSLFLKAKVI Trigger: TATAACCTTGGCCTTCAGAAACAAGGACCAACTCAAACTCAGCCAATCAACACCCACAAAACAAGCCAAGTTCAAGACATCCCTGGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CAA 90 bp | CCAAAGTTCTGTCCCACAGGCCTCCCCAAAACAGCTCCAGAGTCATATCATTTCAAGAGTTTTCTTGATTaGGGTTATATCTGCCGGCAC | + |
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Preference number: 5 (lower is better) Translates to: PKFCPTGLPKTAPESYHFKSFLD*GYICRH Trigger: GTGCCGGCAGATATAACCCAAATCAAGAAAACTCTT...GAAATGATATGACTCTGGAGCTGTTTTGGGGAGGCCTGTGGGACAGAACTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CCA 90 bp | TGTCTGAAACATTCGAAAGCTCTGCTTTCAAGGTCCACAGCTCCTTaGACATCTCAGAATTTTTCACCAAGACCAAAGCAGAGAGGACGA | + |
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Preference number: 5 (lower is better) Translates to: CLKHSKALLSRSTAP*TSQNFSPRPKQRGR Trigger: TCGTCCTCTCTGCTTTGGTCTTGGTGAAAAATTCTGAGATGTCCAAGGAGCTGTGGACCTTGAAAGCAGAGCTTTCGAATGTTTCAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS-3UTR CAA 90 bp | TCTACTTTTGTAGCCAGAGCTGACCTTGAACTCATGATCCTCCTATCTCAATCAAGGGATGTCTTGAACTaGGCTTGTTTTGTGGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: STFVARADLELMILLSQSRDVLN*ACFVGV Trigger: AACACCCACAAAACAAGCCAAGTTCAAGACATCCCT...TGATTGAGATAGGAGGATCATGAGTTCAAGGTCAGCTCTGGCTACAAAAGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CCA 72 bp | TCTGCCGGCACAGTCTTCAGCCGGTCGTTTCCAGTCTaGATGCTACTCATGACTGTGCCAAGGGTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SAGTVFSRSFPV*MLLMTVPRVFL Trigger: CAAGAAGACCCTTGGCACAGTCATGAGTAGCATCCAGACTGGAAACGACCGGCTGAAGACTGTGCCGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CAA 72 bp | CTTGATGTCCCCCTGGGCAGCTTCCCAAATCCTCGTTaGCTGATTCTGGAGCTCCCGGATATTCCACACCGT | + |
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Preference number: 6 (lower is better) Translates to: LDVPLGSFPNPR*LILELPDIPHR Trigger: ACGGTGTGGAATATCCGGGAGCTCCAGAATCAGCAAACGAGGATTTGGGAAGCTGCCCAGGGGGACATCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CAA 72 bp | GGCGGGGACTCAGCTGGGTCCAGGGATGTCTTGAACTaGGCTTGTTTTGTGGGTGTTGATTGGCTGAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: GGDSAGSRDVLN*ACFVGVDWLSL Trigger: CAAACTCAGCCAATCAACACCCACAAAACAAGCCAAGTTCAAGACATCCCTGGACCCAGCTGAGTCCCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CAA 90 bp | TCGTTTCCAGTCTGGATGCTACTCATGACTGTGCCAAGGGTCTTCTaGACCTCCTTGATGTCCCCCTGGGCAGCTTCCCAAATCCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: SFPVWMLLMTVPRVF*TSLMSPWAASQILV Trigger: AACGAGGATTTGGGAAGCTGCCCAGGGGGACATCAAGGAGGTCAAGAAGACCCTTGGCACAGTCATGAGTAGCATCCAGACTGGAAACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CAA 90 bp | TACAACCAAGGCGGGGACTCAGCTGGGTCCAGGGATGTCTTGAACTaGGCTTGTTTTGTGGGTGTTGATTGGCTGAGTTTGAGTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: YNQGGDSAGSRDVLN*ACFVGVDWLSLSWS Trigger: GGACCAACTCAAACTCAGCCAATCAACACCCACAAAACAAGCCAAGTTCAAGACATCCCTGGACCCAGCTGAGTCCCCGCCTTGGTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CCA 72 bp | CATAATGGTTCTGTACAACCAAGGCGGGGACTCAGCTaGGTCCAGGGATGTCTTGAACTTGGCTTGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: HNGSVQPRRGLS*VQGCLELGLFC Trigger: ACAAAACAAGCCAAGTTCAAGACATCCCTGGACCCAGCTGAGTCCCCGCCTTGGTTGTACAGAACCATTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CCA 72 bp | GCCTTCTTTTCTAGCGCCTCAAGAGTTTTCTTGATTTaGGTTATATCTGCCGGCACAGTCTTCAGCCGGTCG | + |
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Preference number: 6 (lower is better) Translates to: AFFSSASRVFLI*VISAGTVFSRS Trigger: CGACCGGCTGAAGACTGTGCCGGCAGATATAACCCAAATCAAGAAAACTCTTGAGGCGCTAGAAAAGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS TCA 72 bp | GCTGTGCCTTCTTTTCTAGCGCCTCAAGAGTTTTCTTaGTTTGGGTTATATCTGCCGGCACAGTCTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: AVPSFLAPQEFS*FGLYLPAQSSA Trigger: GGCTGAAGACTGTGCCGGCAGATATAACCCAAATCAAGAAAACTCTTGAGGCGCTAGAAAAGAAGGCACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS CAA 90 bp | GTGTCTGAAACATTCGAAAGCTCTGCTTTCAAGGTCCACAGCTCCTaGGACATCTCAGAATTTTTCACCAAGACCAAAGCAGAGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: VSETFESSAFKVHSS*DISEFFTKTKAERT Trigger: CGTCCTCTCTGCTTTGGTCTTGGTGAAAAATTCTGAGATGTCCAAGGAGCTGTGGACCTTGAAAGCAGAGCTTTCGAATGTTTCAGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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| CDS TCA 72 bp | CAGGGATGTCTTGAACTTGGCTTGTTTTGTGGGTGTTaGTTGGCTGAGTTTGAGTTGGTCCTTGTTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: QGCLELGLFCGC*LAEFELVLVSE Trigger: TTCAGAAACAAGGACCAACTCAAACTCAGCCAATCAACACCCACAAAACAAGCCAAGTTCAAGACATCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014118.4 |
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