Pregenerated sensors for MCCC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027709Ensembl transcript IDs: ENSMUST00000029259.10, ENSMUST00000199113.5, ENSMUST00000200162.2, ENSMUST00000200163.2
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAACTCTGGGTGGCCGGAGAGCCGGAGCAGGAAGTCCACGTTGCTaGGCAAGCCGACAATGTTGTACTGATGAAGGCAGTACCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: QTLGGRRAGAGSPRC*ASRQCCTDEGSTSA Trigger: AGCTGAGGTACTGCCTTCATCAGTACAACATTGTCGGCTTGCGCAGCAACGTGGACTTCCTGCTCCGGCTCTCCGGCCACCCAGAGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR GCA 90 bp | CCTCAAACTCTGGGTGGCCGGAGAGCCGGAGCAGGAAGTCCACGTTaGTGCGCAAGCCGACAATGTTGTACTGATGAAGGCAGTACCTCA | + |
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Preference number: 1 (lower is better) Translates to: PQTLGGRRAGAGSPR*CASRQCCTDEGSTS Trigger: TGAGGTACTGCCTTCATCAGTACAACATTGTCGGCTTGCGCAGCAACGTGGACTTCCTGCTCCGGCTCTCCGGCCACCCAGAGTTTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR GCA 90 bp | TTCATCTCCTTGCCGGACTCCAGTTTCAATCCTCGTAGACATGTCTaGCGAAGGGGTAGAGAGATGAACCAACGGTCCAGCCCCTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: FISLPDSSFNPRRHV*RRGREMNQRSSPWH Trigger: ATGCCAGGGGCTGGACCGTTGGTTCATCTCTCTACCCCTTCGGCAGACATGTCTACGAGGATTGAAACTGGAGTCCGGCAAGGAGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR TCA 90 bp | CCAGTTTCAATCCTCGTAGACATGTCTGCCGAAGGGGTAGAGAGATaGACCAACGGTCCAGCCCCTGGCATGAAGTTATTGTCAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: PVSILVDMSAEGVER*TNGPAPGMKLLSGS Trigger: AGACCCTGACAATAACTTCATGCCAGGGGCTGGACCGTTGGTTCATCTCTCTACCCCTTCGGCAGACATGTCTACGAGGATTGAAACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR TCA 90 bp | CAGTATCTGGACATGAAACAGAGGAAGGCTTTCCCAAAGTTTCTCTaGGCCTCCCACCTCCCCAAGGAGATCTTGGCAAGGGGAAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: QYLDMKQRKAFPKFL*ASHLPKEILARGRG Trigger: TCCTCTTCCCCTTGCCAAGATCTCCTTGGGGAGGTGGGAGGCTCAGAGAAACTTTGGGAAAGCCTTCCTCTGTTTCATGTCCAGATACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR GCA 90 bp | CACAGTTCCTGCTCCCACGTACTTGACAGCCTTCGCAGCTCTGACTaGAGCCTCTCCCAGCTTTCTTCTTACTTCAGGATTAATACCAGG | + |
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Preference number: 1 (lower is better) Translates to: HSSCSHVLDSLRSSD*SLSQLSSYFRINTR Trigger: CCTGGTATTAATCCTGAAGTAAGAAGAAAGCTGGGAGAGGCTGCAGTCAGAGCTGCGAAGGCTGTCAAGTACGTGGGAGCAGGAACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR GCA 90 bp | AACCAACGGTCCAGCCCCTGGCATGAAGTTATTGTCAGGGTCTTCTaGATAGATTCTAGCCTCAAAGGCATGGCCCTGCAGAGGGATTTC | + |
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Preference number: 1 (lower is better) Translates to: NQRSSPWHEVIVRVF*IDSSLKGMALQRDF Trigger: GAAATCCCTCTGCAGGGCCATGCCTTTGAGGCTAGAATCTATGCAGAAGACCCTGACAATAACTTCATGCCAGGGGCTGGACCGTTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR TCA 90 bp | GCCTTGGAGTGTCCACGAACTTCTCGATCAACATTGCATCATCATTaGAAGACTTCTTCGCCTCCCTCCGGGCTGACTCTAACTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ALECPRTSRSTLHHH*KTSSPPSGLTLTAL Trigger: AAGAGCAGTTAGAGTCAGCCCGGAGGGAGGCGAAGAAGTCTTTCAATGATGATGCAATGTTGATCGAGAAGTTCGTGGACACTCCAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR GCA 90 bp | GTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACTGCGTTaGCATGGTGATCACCAAACACCTGGACTTCTACATGCCTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: VASAHYSLFQTSTLR*HGDHQTPGLLHALE Trigger: CTCCAAGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAACGCAGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR TCA 90 bp | TGCACACTACAGTCTCTTTCAAACAAGTACACTGCGTTGCCATGGTaGTCACCAAACACCTGGACTTCTACATGCCTTGGAGTGTCCACG | + |
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Preference number: 1 (lower is better) Translates to: CTLQSLSNKYTALPW*SPNTWTSTCLGVST Trigger: CGTGGACACTCCAAGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAACGCAGTGTACTTGTTTGAAAGAGACTGTAGTGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR GCA 90 bp | CTGATGTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACTaGGTTGCCATGGTGATCACCAAACACCTGGACTTCTACATGCCT | + |
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Preference number: 1 (lower is better) Translates to: LMSPLHTTVSFKQVH*VAMVITKHLDFYMP Trigger: AGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAACGCAGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR TCA 90 bp | ACTTCAGGATTAATACCAGGCGCTGGGGCCTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACT | + |
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Preference number: 1 (lower is better) Translates to: TSGLIPGAGASSMIF*CRLCTLQSLSNKYT Trigger: AGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAATCCTGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR GCA 90 bp | TCATCATTGAAAGACTTCTTCGCCTCCCTCCGGGCTGACTCTAACTaGTCTTGGAATTCTCTCTCTGATCTAACGATCCTCATGCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: SSLKDFFASLRADSN*SWNSLSDLTILMPF Trigger: AAAAGGCATGAGGATCGTTAGATCAGAGAGAGAATTCCAAGAGCAGTTAGAGTCAGCCCGGAGGGAGGCGAAGAAGTCTTTCAATGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR CCA 90 bp | GACTCCTCCTCCTCAAATTCCACTAAAGGTGCATGTCTGTTGGCTTaGGCTCCTTCACTGAAGAATACCTTCTTTATCCTGCCATCCTTT | + |
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Preference number: 1 (lower is better) Translates to: DSSSSNSTKGACLLA*APSLKNTFFILPSF Trigger: AAAGGATGGCAGGATAAAGAAGGTATTCTTCAGTGAAGGAGCCCAAGCCAACAGACATGCACCTTTAGTGGAATTTGAGGAGGAGGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR GCA 90 bp | AAGCTTTCCAAACACAAGGACAAGAGACAAGTAACACTCGTGTCCTaGTTGATGACGTTACTGTTGGCTGAGTTTAGCTCTGTGACACGT | + |
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Preference number: 1 (lower is better) Translates to: KLSKHKDKRQVTLVS*LMTLLLAEFSSVTR Trigger: ACGTGTCACAGAGCTAAACTCAGCCAACAGTAACGTCATCAAGCAGGACACGAGTGTTACTTGTCTCTTGTCCTTGTGTTTGGAAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR TCA 90 bp | TCGATCAACATTGCATCATCATTGAAAGACTTCTTCGCCTCCCTCCGGGCTGACCTCCAGCAGCAGCCATaGTGGACTTGGACGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SINIASSLKDFFASLRADLQQQP*WTWTCS Trigger: AGAGCACGTCCAAGTCCATCATGGCTGCTGCTGGAG...GTCAGCCCGGAGGGAGGCGAAGAAGTCTTTCAATGATGATGCAATGTTGATCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR CAA 90 bp | GAGCTTTGCGATCATGGGATCGTAATGCACCGAGACTTCATCTCCTaGCCGGACTCCAGTTTCAATCCTCGTAGACATGTCTGCCGAAGG | + |
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Preference number: 2 (lower is better) Translates to: ELCDHGIVMHRDFIS*PDSSFNPRRHVCRR Trigger: CCTTCGGCAGACATGTCTACGAGGATTGAAACTGGAGTCCGGCAAGGAGATGAAGTCTCGGTGCATTACGATCCCATGATCGCAAAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCCTTCTGCACTCACTGGAGACAAGTACTTGGGCACTGGAATGCCAACTTCTAGCCTCAAAGGCATaGCCCTGCAGAGGGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: ELLLHSLETSTWALECQLLASKA*PCRGIS Trigger: AGAAATCCCTCTGCAGGGCCATGCCTTTGAGGCTAG...AAGTTGGCATTCCAGTGCCCAAGTACTTGTCTCCAGTGAGTGCAGAAGGAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAACTGCGTTGCCATGGTaGTCACCAAACACCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: SSLRDLETEEALAVRRQITALPW*SPNTWT Trigger: AGTCCAGGTGTTTGGTGATCACCATGGCAACGCAGT...TATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGCCATCAGGGGTAACTACAAAGCCACTCACCTACAGGACTATTCCTCTTCTGAAGGGGTAGAGAGATaGACCAACGGTCCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: IAIRGNYKATHLQDYSSSEGVER*TNGPAP Trigger: AGGGGCTGGACCGTTGGTTCATCTCTCTACCCCTTC...AGAAGAGGAATAGTCCTGTAGGTGAGTGGCTTTGTAGTTACCCCTGATGGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR TCA 90 bp | ACACTGAGTCAACACCACTCAGGGCTCCCTGAGACCCCCACAAGCACAACAAAGTCTCCCACTGCTGAATaGAAACGGAGAGAATTGATC | + |
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Preference number: 2 (lower is better) Translates to: TLSQHHSGLPETPTSTTKSPTAE*KRRELI Trigger: GATCAATTCTCTCCGTTTTCATTCAGCAGTGGGAGA...CTTTGTTGTGCTTGTGGGGGTCTCAGGGAGCCCTGAGTGGTGTTGACTCAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR GCA 90 bp | ACACTGAGTCAACACCACTCAGGGCTCCCTGAGACCCCCACAAGCACAACAAAGCTGGACACAGTTCACTaGGATTCTCATTTGTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: TLSQHHSGLPETPTSTTKLDTVH*DSHLSD Trigger: GTCTGACAAATGAGAATCGCAGTGAACTGTGTCCAG...CTTTGTTGTGCTTGTGGGGGTCTCAGGGAGCCCTGAGTGGTGTTGACTCAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR CAA 90 bp | GATCTAACGATCCTCATGCCTTTTCCTCCTCCACCACGGACTGCTTaGATCATAACAGGATACCCGATTTTCCCAGCATGCTCTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: DLTILMPFPPPPRTA*IITGYPIFPACSLR Trigger: CCTGAGAGAGCATGCTGGGAAAATCGGGTATCCTGTTATGATCAAAGCAGTCCGTGGTGGAGGAGGAAAAGGCATGAGGATCGTTAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR CAA 90 bp | TGCCTTGGAGTGTCCACGAACTTCTCGATCAACATTGCATCATCATaGAAAGACTTCTTCGCCTCCCTCCGGGCTGACTCTAACTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: CLGVSTNFSINIASS*KDFFASLRADSNCS Trigger: AGAGCAGTTAGAGTCAGCCCGGAGGGAGGCGAAGAAGTCTTTCAATGATGATGCAATGTTGATCGAGAAGTTCGTGGACACTCCAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCGCCTCCCTCCGGGCTGACTCTAACTGCTCTTGGAATTCTCTCTCTGATTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTA | + |
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Preference number: 2 (lower is better) Translates to: FFASLRADSNCSWNSLSDSSMIF*CRLCTL Trigger: TAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGA...ATCAGAGAGAGAATTCCAAGAGCAGTTAGAGTCAGCCCGGAGGGAGGCGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGCCATCAGGGGTAACTACAAAGCCACTCACCTACAGGACTATTCCTCTTCTGGGATGAAGTCCGTGTaGACGTTCCCAGCCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: IAIRGNYKATHLQDYSSSGMKSV*TFPASN Trigger: GTTTGAGGCTGGGAACGTGCACACGGACTTCATCCC...AGAAGAGGAATAGTCCTGTAGGTGAGTGGCTTTGTAGTTACCCCTGATGGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCCTTCTGCACTCACTGGAGACAAGTACTTGGGCACTGGAATGCCAACTTTTCAAACAAGTACACTaGGTTGCCATGGTGATCACC | + |
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Preference number: 2 (lower is better) Translates to: ELLLHSLETSTWALECQLFKQVH*VAMVIT Trigger: GGTGATCACCATGGCAACGCAGTGTACTTGTTTGAA...AAGTTGGCATTCCAGTGCCCAAGTACTTGTCTCCAGTGAGTGCAGAAGGAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCGCCTCCCTCCGGGCTGACTCTAACTGCTCTTGGAATTCTCTCTCTGATTTCAAACAAGTACACTaGGTTGCCATGGTGATCACC | + |
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Preference number: 2 (lower is better) Translates to: FFASLRADSNCSWNSLSDFKQVH*VAMVIT Trigger: GGTGATCACCATGGCAACGCAGTGTACTTGTTTGAA...ATCAGAGAGAGAATTCCAAGAGCAGTTAGAGTCAGCCCGGAGGGAGGCGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR-3UTR GCA 90 bp | ACACTGAGTCAACACCACTCAGGGCTCCCTGAGACCCCCACAAGCACAACAAAGGATCAAGCTACTCCCTaGCTTATTACTAAGAGTACA | + |
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Preference number: 2 (lower is better) Translates to: TLSQHHSGLPETPTSTTKDQATP*LITKST Trigger: TGTACTCTTAGTAATAAGGCAGGGAGTAGCTTGATC...CTTTGTTGTGCTTGTGGGGGTCTCAGGGAGCCCTGAGTGGTGTTGACTCAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR CAA 90 bp | CTTTCCAAACACAAGGACAAGAGACAAGTAACACTCGTGTCCTGCTaGATGACGTTACTGTTGGCTGAGTTTAGCTCTGTGACACGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LSKHKDKRQVTLVSC*MTLLLAEFSSVTRA Trigger: GGCACGTGTCACAGAGCTAAACTCAGCCAACAGTAACGTCATCAAGCAGGACACGAGTGTTACTTGTCTCTTGTCCTTGTGTTTGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCATGGCAATCATAACCATCAGAGAGTCTCCAGCTTTTACTCTGTCTCCACTGGGGCCTCCTCAATaGTCTTCTGATGTCGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: IFMAIITIRESPAFTLSPLGPPQ*SSDVAS Trigger: AGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG...TGGAGACAGAGTAAAAGCTGGAGACTCTCTGATGGTTATGATTGCCATGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR GCA 90 bp | CAAACACCTGGACTTCTACATGCCTTGGAGTGTCCACGAACTTCTCGATCAACACGGGCTGACTCTAACTaGTCTTGGAATTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QTPGLLHALECPRTSRSTRADSN*SWNSLS Trigger: AGAGAGAGAATTCCAAGAGCAGTTAGAGTCAGCCCG...TGTTGATCGAGAAGTTCGTGGACACTCCAAGGCATGTAGAAGTCCAGGTGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGACTTCTACATGCCTTGGAGTGTCCACGAACTTCTCGATCAACATTGCATACAAGTACACTGCGTTaGCATGGTGATCACCAAACA | + |
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Preference number: 2 (lower is better) Translates to: PGLLHALECPRTSRSTLHTSTLR*HGDHQT Trigger: TGTTTGGTGATCACCATGGCAACGCAGTGTACTTGT...ATGCAATGTTGATCGAGAAGTTCGTGGACACTCCAAGGCATGTAGAAGTCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTGATGTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACTGCGTAATCTTCTCTCCTGCTaGAATCCTGAGTTGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: SSDVASAHYSLFQTSTLRNLLSC*NPELPL Trigger: GAGTGGCAACTCAGGATTGCAGCAGGAGAGAAGATT...ACGCAGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGGAGGATGAACTTGGATTTACGGGCTACCCCATTAATAGAAGACTTCAGAGGAATCTTCTCTCCTaGTGCAATCCTGAGTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VQEDELGFTGYPINRRLQRNLLS*CNPELP Trigger: TGGCAACTCAGGATTGCAGCAGGAGAGAAGATTCCT...CTGAAGTCTTCTATTAATGGGGTAGCCCGTAAATCCAAGTTCATCCTCCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTGATGTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACTGCGTATTAATACCAGGCGCTaGGGCCTCCTCAATGATCTT | + |
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Preference number: 2 (lower is better) Translates to: SSDVASAHYSLFQTSTLRINTRR*GLLNDL Trigger: AAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAT...ACGCAGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGTCGTCTATTTCTTTCTaGACACAGTTCACTGCGATT | + |
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Preference number: 2 (lower is better) Translates to: SLRDLETEEALAVRRQIRSSISF*TQFTAI Trigger: AATCGCAGTGAACTGTGTCCAGAAAGAAATAGACGA...CCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGTACACTGCGTTGCCATGGTGATCACCAAACACCTGGACTTCTACATGCCTGACTCTAACTGCTCTTaGAATTCTCTCTCTGATCTA | + |
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Preference number: 2 (lower is better) Translates to: QVHCVAMVITKHLDFYMPDSNCS*NSLSDL Trigger: TAGATCAGAGAGAGAATTCCAAGAGCAGTTAGAGTC...AGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAACGCAGTGTACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR-3UTR CCA 90 bp | TATATCACTTTTACCACTTCTCAGAGTCATGTTCCTGGTGTAAGAGATATTCAGAGAGGGATTTCTTCCTaGCTCAAAGGAATCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: YITFTTSQSHVPGVRDIQRGISS*LKGIFS Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATCCCTCT...CTGAATATCTCTTACACCAGGAACATGACTCTGAGAAGTGGTAAAAGTGATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR TCA 72 bp | TGTGACTCGGCAGCAGGTCCTTGTGGTGCTGAGGGATaGAGTCCGTGTGCACGTTCCCAGCCTCAAACTCTG | + |
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Preference number: 3 (lower is better) Translates to: CDSAAGPCGAEG*SPCARSQPQTL Trigger: CAGAGTTTGAGGCTGGGAACGTGCACACGGACTTCATCCCTCAGCACCACAAGGACCTGCTGCCGAGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR TCA 72 bp | ACAGCACACACTGAGTCAACACCACTCAGGGCTCCCTaGGACCCCCACAAGCACAACAAAGGCAGAGGGACC | + |
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Preference number: 3 (lower is better) Translates to: TAHTESTPLRAP*DPHKHNKGRGT Trigger: GGTCCCTCTGCCTTTGTTGTGCTTGTGGGGGTCTCAGGGAGCCCTGAGTGGTGTTGACTCAGTGTGTGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR TCA 72 bp | CCTGGATATGGCTGTGGCCATGTCAACAGCACACACTaGGTCAACACCACTCAGGGCTCCCTGAGACCCCCA | + |
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Preference number: 3 (lower is better) Translates to: PGYGCGHVNSTH*VNTTQGSLRPP Trigger: TGGGGGTCTCAGGGAGCCCTGAGTGGTGTTGACTCAGTGTGTGCTGTTGACATGGCCACAGCCATATCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR GCA 72 bp | ACACCTTTTCAATGGTTCCAGTCATGGGCGCGATGGTaGCCCCCTGAGCTCCTTCTGCACTCACTGGAGACA | + |
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Preference number: 3 (lower is better) Translates to: TPFQWFQSWARW*PPELLLHSLET Trigger: TGTCTCCAGTGAGTGCAGAAGGAGCTCAGGGGGGCACCATCGCGCCCATGACTGGAACCATTGAAAAGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR GCA 72 bp | TTGCCGGACTCCAGTTTCAATCCTCGTAGACATGTCTaGCGAAGGGGTAGAGAGATGAACCAACGGTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: LPDSSFNPRRHV*RRGREMNQRSS Trigger: GCTGGACCGTTGGTTCATCTCTCTACCCCTTCGGCAGACATGTCTACGAGGATTGAAACTGGAGTCCGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR GCA 72 bp | CAGCATGCTCTCTCAGGCACTGATCAGACTGGTCCTTaGCATGGTAACCTTCCACAACAGGAACTCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: QHALSGTDQTGP*HGNLPQQELQQ Trigger: CTGCTGGAGTTCCTGTTGTGGAAGGTTACCATGGCAAGGACCAGTCTGATCAGTGCCTGAGAGAGCATGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| 3UTR CCA 72 bp | GCCTCAAAGGCATGGCCCTGCAGAGGGATTTCTTCCTaGCTCAAAGGAATCTTCTCTCCTGCTGCAATCCTG | + |
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Preference number: 3 (lower is better) Translates to: ASKAWPCRGISS*LKGIFSPAAIL Trigger: CAGGATTGCAGCAGGAGAGAAGATTCCTTTGAGCCAGGAAGAAATCCCTCTGCAGGGCCATGCCTTTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| 3UTR TCA 72 bp | ATCCTCGTAGACATGTCTGCCGAAGGGGTAGAGAGATaGACCAACGGTCCAGCCCCTGGCATGAAGTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: ILVDMSAEGVER*TNGPAPGMKLL Trigger: CAATAACTTCATGCCAGGGGCTGGACCGTTGGTTCATCTCTCTACCCCTTCGGCAGACATGTCTACGAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR GCA 72 bp | TGCTCCCACGTACTTGACAGCCTTCGCAGCTCTGACTaGAGCCTCTCCCAGCTTTCTTCTTACTTCAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: CSHVLDSLRSSD*SLSQLSSYFRI Trigger: AATCCTGAAGTAAGAAGAAAGCTGGGAGAGGCTGCAGTCAGAGCTGCGAAGGCTGTCAAGTACGTGGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCATGTCAACAGCACACACTGAGTCAACACCACTCAGGGCTCCCTGAGACCCGGAGAGAATTGATCTaGAGTGTGGAGTTTAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: WPCQQHTLSQHHSGLPETRRELI*SVEFKS Trigger: GCTTTTAAACTCCACACTCAAGATCAATTCTCTCCG...GGTCTCAGGGAGCCCTGAGTGGTGTTGACTCAGTGTGTGCTGTTGACATGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR GCA 72 bp | GGTCATTTCTTTCTCTTTGAGGATGAGCCCCAGAGCTaGCTGGCACACAGACTCTTTGGCTATAGTGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GHFFLFEDEPQS*LAHRLFGYSAV Trigger: CACAGCACTATAGCCAAAGAGTCTGTGTGCCAGGCAGCTCTGGGGCTCATCCTCAAAGAGAAAGAAATGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR CCA 72 bp | CCTGAGCTCCTTCTGCACTCACTGGAGACAAGTACTTaGGCACTGGAATGCCAACTTCAATACTGCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PELLLHSLETST*ALECQLQYCLP Trigger: TGGAAGGCAGTATTGAAGTTGGCATTCCAGTGCCCAAGTACTTGTCTCCAGTGAGTGCAGAAGGAGCTCAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR TCA 72 bp | TTAATACCAGGCGCTGGGGCCTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTACAGTCTCTTTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LIPGAGASSMIF*CRLCTLQSLSN Trigger: GTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR GCA 72 bp | AGAGGCACTTGCTGTTCGCAGACAGATAAGGCGCTATaGGGTCGTCTATTTCTTTCTGGACACAGTTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: RGTCCSQTDKAL*GRLFLSGHSSL Trigger: CAGTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGTCTGCGAACAGCAAGTGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| 3UTR GCA 72 bp | AAAGACTTCTTCGCCTCCCTCCGGGCTGACTCTAACTaGTCTTGGAATTCTCTCTCTGATCTAACGATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KDFFASLRADSN*SWNSLSDLTIL Trigger: GAGGATCGTTAGATCAGAGAGAGAATTCCAAGAGCAGTTAGAGTCAGCCCGGAGGGAGGCGAAGAAGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
||
| 3UTR TCA 72 bp | TGTCCACGAACTTCTCGATCAACATTGCATCATCATTaGAAGACTTCTTCGCCTCCCTCCGGGCTGACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: CPRTSRSTLHHH*KTSSPPSGLTL Trigger: TAGAGTCAGCCCGGAGGGAGGCGAAGAAGTCTTTCAATGATGATGCAATGTTGATCGAGAAGTTCGTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
||
| 3UTR GCA 72 bp | CCTCTGCACACTACAGTCTCTTTCAAACAAGTACACTaGGTTGCCATGGTGATCACCAAACACCTGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: PLHTTVSFKQVH*VAMVITKHLDF Trigger: GAAGTCCAGGTGTTTGGTGATCACCATGGCAACGCAGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
||
| 3UTR TCA 72 bp | GATTTAATAAAGCTCCTCTCTCCGAGATCTAGAGACTaGAGAGGCACTTGCTGTTCGCAGACAGATAAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: DLIKLLSPRSRD*RGTCCSQTDKA Trigger: CGCCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCTTTATTAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| 3UTR TCA 72 bp | CAGTCTCTTTCAAACAAGTACACTGCGTTGCCATGGTaGTCACCAAACACCTGGACTTCTACATGCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QSLSNKYTALPW*SPNTWTSTCLG Trigger: TCCAAGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAACGCAGTGTACTTGTTTGAAAGAGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
||
| 3UTR GCA 72 bp | GCACACTACAGTCTCTTTCAAACAAGTACACTGCGTTaGCATGGTGATCACCAAACACCTGGACTTCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: AHYSLFQTSTLR*HGDHQTPGLLH Trigger: ATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAACGCAGTGTACTTGTTTGAAAGAGACTGTAGTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
||
| 3UTR GCA 72 bp | TATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACTaGGATTCTCATTTGTCAGACTCCTCCTCCTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: YAVVYFFLDTVH*DSHLSDSSSSN Trigger: ATTTGAGGAGGAGGAGTCTGACAAATGAGAATCGCAGTGAACTGTGTCCAGAAAGAAATAGACGACCGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR GCA 72 bp | AAACACAAGGACAAGAGACAAGTAACACTCGTGTCCTaGTTGATGACGTTACTGTTGGCTGAGTTTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KHKDKRQVTLVS*LMTLLLAEFSS Trigger: AGAGCTAAACTCAGCCAACAGTAACGTCATCAAGCAGGACACGAGTGTTACTTGTCTCTTGTCCTTGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR CCA 72 bp | TCCTCAAATTCCACTAAAGGTGCATGTCTGTTGGCTTaGGCTCCTTCACTGAAGAATACCTTCTTTATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSNSTKGACLLA*APSLKNTFFIL Trigger: CAGGATAAAGAAGGTATTCTTCAGTGAAGGAGCCCAAGCCAACAGACATGCACCTTTAGTGGAATTTGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR TCA 72 bp | TCCTGGTGTAAGAGATATTCAGTCTTCTCCCACTGCTaGATGAAAACGGAGAGAATTGATCTTGAGTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SWCKRYSVFSHC*MKTERIDLECG Trigger: TCCACACTCAAGATCAATTCTCTCCGTTTTCATTCAGCAGTGGGAGAAGACTGAATATCTCTTACACCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR CCA 72 bp | ATGCCAACTTCAATACTGCCTTCCATAGAAAACAGGTaGACAGTGTTGTCCAGGAGGATGAACTTGGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: MPTSILPSIENR*TVLSRRMNLDL Trigger: TAAATCCAAGTTCATCCTCCTGGACAACACTGTCCACCTGTTTTCTATGGAAGGCAGTATTGAAGTTGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR TCA 72 bp | TATCATATGACCCATCGCGGTTATACGTCACAGCTATaGCTATATCACTTTTACCACTTCTCAGAGTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: YHMTHRGYTSQL*LYHFYHFSESC Trigger: ACATGACTCTGAGAAGTGGTAAAAGTGATATAGTCATAGCTGTGACGTATAACCGCGATGGGTCATATGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR TCA 90 bp | GCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCGCAAGTGCTGGGATCGGACTGAAGGGGTAGAGAGATaGACCAACGGTCCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASNSEIHLPLPRKCWDRTEGVER*TNGPAP Trigger: AGGGGCTGGACCGTTGGTTCATCTCTCTACCCCTTC...AGTCCGATCCCAGCACTTGCGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR CCA 90 bp | AATCCACCTGCCTCTGCCTCGCAAGTGCTGGGATCGGACTCACCTGAGTCCTGGCTAGCCTCAAAGGCATaGCCCTGCAGAGGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NPPASASQVLGSDSPESWLASKA*PCRGIS Trigger: AGAAATCCCTCTGCAGGGCCATGCCTTTGAGGCTAG...CCAGGACTCAGGTGAGTCCGATCCCAGCACTTGCGAGGCAGAGGCAGGTGGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCGCAAGTGCTGGGATACTGCGTTGCCATGGTaGTCACCAAACACCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RLASNSEIHLPLPRKCWDTALPW*SPNTWT Trigger: AGTCCAGGTGTTTGGTGATCACCATGGCAACGCAGT...ATCCCAGCACTTGCGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGGAAGGGGTAGAGAGATaGACCAACGGTCCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLRDLETEEALAVRRQEGVER*TNGPAP Trigger: AGGGGCTGGACCGTTGGTTCATCTCTCTACCCCTTC...CTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR GCA 90 bp | TCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGTCATGGGCGCGATGGTaGCCCCCTGAGCTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRDLETEEALAVRRQIRSWARW*PPELLL Trigger: CAGAAGGAGCTCAGGGGGGCACCATCGCGCCCATGA...CCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR TCA 90 bp | CGAACTCAGAAATCCACCTGCCTCTGCCTCGCAAGTGCTGGGATCGGACTCACCTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTA | + |
|
Preference number: 4 (lower is better) Translates to: RTQKSTCLCLASAGIGLTSSMIF*CRLCTL Trigger: TAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGA...GGTGAGTCCGATCCCAGCACTTGCGAGGCAGAGGCAGGTGGATTTCTGAGTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR GCA 90 bp | TCGAACTCAGAAATCCACCTGCCTCTGCCTCGCAAGTGCTGGGATCGGACTCACACCTGGACTTCTACATaGCTTGGAGTGTCCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SNSEIHLPLPRKCWDRTHTWTST*LGVSTN Trigger: GTTCGTGGACACTCCAAGGCATGTAGAAGTCCAGGT...GTGAGTCCGATCCCAGCACTTGCGAGGCAGAGGCAGGTGGATTTCTGAGTTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| 3UTR CAA 72 bp | TCCATAATGAATTCCACAGTTCCTGCTCCCACGTACTaGACAGCCTTCGCAGCTCTGACTGCAGCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SIMNSTVPAPTY*TAFAALTAASP Trigger: GGGAGAGGCTGCAGTCAGAGCTGCGAAGGCTGTCAAGTACGTGGGAGCAGGAACTGTGGAATTCATTATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCTCCAGCAGCAGCCATaGTGGACTTGGACGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRDLETEEALAVRRQIRLQQQP*WTWTCS Trigger: AGAGCACGTCCAAGTCCATCATGGCTGCTGCTGGAG...CCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR TCA 90 bp | CTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCGCACTGCGTTGCCATGGTaGTCACCAAACACCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LRDLETEEALAVRRQIRRTALPW*SPNTWT Trigger: AGTCCAGGTGTTTGGTGATCACCATGGCAACGCAGT...GCGCCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGTGTGGTGCTGAGGGATaGAGTCCGTGTGCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRDLETEEALAVRRQIRCGAEG*SPCARS Trigger: GGAACGTGCACACGGACTTCATCCCTCAGCACCACA...CCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCGCAAGTGCTGGGATCGGACTACAAGTACACTGCGTTaGCATGGTGATCACCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ASNSEIHLPLPRKCWDRTTSTLR*HGDHQT Trigger: TGTTTGGTGATCACCATGGCAACGCAGTGTACTTGT...AGTCCGATCCCAGCACTTGCGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAAATCCACCTGCCTCTGCCTCGCAAGTGCTGGGATCGGACTCACCTGAGTATTAATACCAGGCGCTaGGGCCTCCTCAATGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEIHLPLPRKCWDRTHLSINTRR*GLLNDL Trigger: AAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAT...ACTCAGGTGAGTCCGATCCCAGCACTTGCGAGGCAGAGGCAGGTGGATTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCAGTCCCTGTGATCATTTCAGTGACAGGATGTTCCACTTGTAGCCTGGTGCTCCAGCAGCAGCCATaGTGGACTTGGACGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSVPVIISVTGCSTCSLVLQQQP*WTWTCS Trigger: AGAGCACGTCCAAGTCCATCATGGCTGCTGCTGGAG...CACCAGGCTACAAGTGGAACATCCTGTCACTGAAATGATCACAGGGACTGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR TCA 90 bp | ACCGAGACTTCATCTCTTTGTAGACAAGGCTGGCCTCGAACTCAGAAATCCACCCTGGGGCCTCCTCAATaGTCTTCTGATGTCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TETSSLCRQGWPRTQKSTLGPPQ*SSDVAS Trigger: AGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG...GGTGGATTTCTGAGTTCGAGGCCAGCCTTGTCTACAAAGAGATGAAGTCTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAGGGATGAAGTCCGTGTaGACGTTCCCAGCCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRDLETEEALAVRRQIGMKSV*TFPASN Trigger: GTTTGAGGCTGGGAACGTGCACACGGACTTCATCCC...TATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGCCATATCTACATGCATaGAATTCCGGTCGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLRDLETEEALAVRRQPYLHA*NSGRPH Trigger: GTGAGGCCGACCGGAATTCCATGCATGTAGATATGG...CTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGGTAGCTCTGCTGAGATaGAGCAGGGCCAATGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLRDLETEEALAVRRQVALLR*SRANGI Trigger: TATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTAC...CTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR CCA 90 bp | ACACCTGGACTTCTACATGCCTTGGAGTGTCCACGAACTTCTCGATCAACATTGCGTAGCCTGGATGGATaGCCTGTGCTGCAGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPGLLHALECPRTSRSTLRSLDG*PVLQSS Trigger: AGAGCTCTGCAGCACAGGCCATCCATCCAGGCTACG...CAATGTTGATCGAGAAGTTCGTGGACACTCCAAGGCATGTAGAAGTCCAGGTGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCGCAAGTGCTGGGATAGAGGGATTTCTTCCTaGCTCAAAGGAATCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLASNSEIHLPLPRKCWDRGISS*LKGIFS Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATCCCTCT...ATCCCAGCACTTGCGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGTCCTTCTGCACTCACTaGAGACAAGTACTTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLRDLETEEALAVRRQSFCTH*RQVLGH Trigger: GTGCCCAAGTACTTGTCTCCAGTGAGTGCAGAAGGA...CTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR TCA 90 bp | AGCTCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLRDLETEEALAVRRQSSMIF*CRLCTL Trigger: TAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGA...CTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGCTGTTCGTATCACCCTaGAGGCAATTTCTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLRDLETEEALAVRRQLFVSP*RQFLLC Trigger: ACAGAGGAGAAATTGCCTGCAGGGTGATACGAACAG...CTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | CTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCGCAGGGCCAATGGAATATaGCTCGTCTGCCATATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LRDLETEEALAVRRQIRRRANGI*LVCHIY Trigger: GTAGATATGGCAGACGAGGCATATTCCATTGGCCCT...GCGCCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | GAGATGAACCAACGGTCCAGCCCCTGGCATGAAGTTATTGTCAGGGTCTTCTGCAGGGCCAATGGAATATaGCTCGTCTGCCATATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EMNQRSSPWHEVIVRVFCRANGI*LVCHIY Trigger: GTAGATATGGCAGACGAGGCATATTCCATTGGCCCT...GCAGAAGACCCTGACAATAACTTCATGCCAGGGGCTGGACCGTTGGTTCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGAATCTTCTCTCCTGCTaGAATCCTGAGTTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLRDLETEEALAVRRQNLLSC*NPELPL Trigger: GAGTGGCAACTCAGGATTGCAGCAGGAGAGAAGATT...CTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR GCA 90 bp | TCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATACCCCTGAGCTCCTTCTaGACTCACTGGAGACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSLRDLETEEALAVRRQIPLSSF*THWRQV Trigger: TACTTGTCTCCAGTGAGTGCAGAAGGAGCTCAGGGG...TATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCCAAACACAAGGACAAGAGACAAGTAACACTCGTGTCCTGCTTGATGACGCGTAGCCTGGATGGATaGCCTGTGCTGCAGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKHKDKRQVTLVSCLMTRSLDG*PVLQSS Trigger: AGAGCTCTGCAGCACAGGCCATCCATCCAGGCTACG...CGTCATCAAGCAGGACACGAGTGTTACTTGTCTCTTGTCCTTGTGTTTGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCTAGCCTCAAAGGCATaGCCCTGCAGAGGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRDLETEEALAVRRQIRLASKA*PCRGIS Trigger: AGAAATCCCTCTGCAGGGCCATGCCTTTGAGGCTAG...CCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR CCA 90 bp | TGCACCGAGACTTCATCTCTTTGTAGACAAGGCTGGCCTCGAACTCAGAAATCCCAACGGTCCAGCCCCTaGCATGAAGTTATTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTETSSLCRQGWPRTQKSQRSSP*HEVIVR Trigger: CCTGACAATAACTTCATGCCAGGGGCTGGACCGTTG...GGATTTCTGAGTTCGAGGCCAGCCTTGTCTACAAAGAGATGAAGTCTCGGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGACTTCTTCGCCTCCCTCCGGGCTGACTCTAACTGCTCTTGGAATTCTATGGAGCAGGGCCAATaGAATATGCCTCGTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKDFFASLRADSNCSWNSMEQGQ*NMPRLP Trigger: AGGCAGACGAGGCATATTCCATTGGCCCTGCTCCAT...AGAATTCCAAGAGCAGTTAGAGTCAGCCCGGAGGGAGGCGAAGAAGTCTTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
||
| CDS-3UTR TCA 90 bp | ACTTCTTCGCCTCCCTCCGGGCTGACTCTAACTGCTCTTGGAATTCTCTCTCTGTCTTGGCCACTTGAATaGTTTTCTCCATTGCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSSPPSGLTLTALGILSLSWPLE*FSPLRG Trigger: ACCTCGCAATGGAGAAAATCATTCAAGTGGCCAAGA...CAGAGAGAGAATTCCAAGAGCAGTTAGAGTCAGCCCGGAGGGAGGCGAAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
||
| CDS-3UTR GCA 90 bp | CGCAGACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACTCTGCCATATCTACATaGATGGAATTCCGGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRQIRRYAVVYFFLDTVHSAIST*MEFRSA Trigger: GGCCGACCGGAATTCCATGCATGTAGATATGGCAGA...GTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGTCTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | CTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCGCACCCATGTCTCTAATTaGAGACGAAGGAGGACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRDLETEEALAVRRQIRRTHVSN*RRRRTY Trigger: ATAGGTCCTCCTTCGTCTGCAATTAGAGACATGGGT...GCGCCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | TCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAACCTGGACTTCTACATaGCTTGGAGTGTCCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRDLETEEALAVRRQITWTST*LGVSTN Trigger: GTTCGTGGACACTCCAAGGCATGTAGAAGTCCAGGT...TATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR CCA 90 bp | ACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACTGCGAATGGAGCAGGGCCAATaGAATATGCCTCGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDKALCGRLFLSGHSSLRMEQGQ*NMPRLP Trigger: TGGCAGACGAGGCATATTCCATTGGCCCTGCTCCAT...TCGCAGTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| 3UTR CAA 72 bp | GATCATGGGATCGTAATGCACCGAGACTTCATCTCCTaGCCGGACTCCAGTTTCAATCCTCGTAGACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: DHGIVMHRDFIS*PDSSFNPRRHV Trigger: GACATGTCTACGAGGATTGAAACTGGAGTCCGGCAAGGAGATGAAGTCTCGGTGCATTACGATCCCATGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR CAA 72 bp | GTGTCCACGAACTTCTCGATCAACATTGCATCATCATaGAAAGACTTCTTCGCCTCCCTCCGGGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSTNFSINIASS*KDFFASLRADS Trigger: AGAGTCAGCCCGGAGGGAGGCGAAGAAGTCTTTCAATGATGATGCAATGTTGATCGAGAAGTTCGTGGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
||
| CDS-3UTR TCA 90 bp | CGCAGACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACGAGCTCTTGGCCACTTaGATGATTTTCTCCATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRQIRRYAVVYFFLDTVHELLAT*MIFSIA Trigger: CGCAATGGAGAAAATCATTCAAGTGGCCAAGAGCTC...GTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGTCTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCGGGCTGACTCTAACTaGTCTTGGAATTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRDLETEEALAVRRQIRRADSN*SWNSLS Trigger: AGAGAGAGAATTCCAAGAGCAGTTAGAGTCAGCCCG...CCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | ACCGAGACTTCATCTCTTTGTAGACAAGGCTGGCCTCGAACTCAGAAATCCACCAATCTTCTCTCCTGCTaGAATCCTGAGTTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TETSSLCRQGWPRTQKSTNLLSC*NPELPL Trigger: GAGTGGCAACTCAGGATTGCAGCAGGAGAGAAGATT...GGTGGATTTCTGAGTTCGAGGCCAGCCTTGTCTACAAAGAGATGAAGTCTCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGAATCTTCTCTCCTaGTGCAATCCTGAGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLRDLETEEALAVRRQIRNLLS*CNPELP Trigger: TGGCAACTCAGGATTGCAGCAGGAGAGAAGATTCCT...TATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR GCA 90 bp | TGCACCGAGACTTCATCTCTTTGTAGACAAGGCTGGCCTCGAACTCAGAAATCCAGGAATCTTCTCTCCTaGTGCAATCCTGAGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CTETSSLCRQGWPRTQKSRNLLS*CNPELP Trigger: TGGCAACTCAGGATTGCAGCAGGAGAGAAGATTCCT...GGATTTCTGAGTTCGAGGCCAGCCTTGTCTACAAAGAGATGAAGTCTCGGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGAACCAACGGTCCAGCCCCTGGCATGAAGTTATTGTCAGGGTCTTCTGCTTGTTCCATACTTCATaGTTCTCAACTTCCAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EMNQRSSPWHEVIVRVFCLFHTS*FSTSKP Trigger: GGGCTTGGAAGTTGAGAACCATGAAGTATGGAACAA...GCAGAAGACCCTGACAATAACTTCATGCCAGGGGCTGGACCGTTGGTTCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAATTAATACCAGGCGCTaGGGCCTCCTCAATGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLRDLETEEALAVRRQIINTRR*GLLNDL Trigger: AAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAT...TATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR CCA 90 bp | TATAATCACACCATCATTGATTTAATAAAGCTCCTCTCTCCGAGATCTAGAGACGCCTCAAACTCTGGGTaGCCGGAGAGCCGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNHTIIDLIKLLSPRSRDASNSG*PESRSR Trigger: CCTGCTCCGGCTCTCCGGCCACCCAGAGTTTGAGGC...GTCTCTAGATCTCGGAGAGAGGAGCTTTATTAAATCAATGATGGTGTGATTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR CCA 90 bp | CGCAGACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACTCCATAGAAAACAGGTaGACAGTGTTGTCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRQIRRYAVVYFFLDTVHSIENR*TVLSRR Trigger: CCTCCTGGACAACACTGTCCACCTGTTTTCTATGGA...GTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGTCTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR CCA 90 bp | CGCAGACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACCTGGAGACAAGTACTTaGGCACTGGAATGCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RRQIRRYAVVYFFLDTVHLETST*ALECQL Trigger: AAGTTGGCATTCCAGTGCCCAAGTACTTGTCTCCAG...GTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGTCTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR TCA 90 bp | GTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACTGCGTTGCCATGGTTCTTGGCCACTTGAATaGTTTTCTCCATTGCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VASAHYSLFQTSTLRCHGSWPLE*FSPLRG Trigger: ACCTCGCAATGGAGAAAATCATTCAAGTGGCCAAGA...ACCATGGCAACGCAGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199113.5 ENSMUST00000200162.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACTGCGAGAGCTCTTGGCCACTTaGATGATTTTCTCCATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TDKALCGRLFLSGHSSLRELLAT*MIFSIA Trigger: CGCAATGGAGAAAATCATTCAAGTGGCCAAGAGCTC...TCGCAGTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR TCA 90 bp | CGCAGACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACACATTGCATCATCATTaGAAGACTTCTTCGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRQIRRYAVVYFFLDTVHTLHHH*KTSSPP Trigger: GGGAGGCGAAGAAGTCTTTCAATGATGATGCAATGT...GTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGTCTGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGACATTGCATCATCATTaGAAGACTTCTTCGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRDLETEEALAVRRQIRTLHHH*KTSSPP Trigger: GGGAGGCGAAGAAGTCTTTCAATGATGATGCAATGT...CCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS-3UTR TCA 90 bp | CGTAATGCACCGAGACTTCATCTCTTTGTAGACAAGGCTGGCCTCGAACTCAGAACATTGCATCATCATTaGAAGACTTCTTCGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNAPRLHLFVDKAGLELRTLHHH*KTSSPP Trigger: GGGAGGCGAAGAAGTCTTTCAATGATGATGCAATGT...TCTGAGTTCGAGGCCAGCCTTGTCTACAAAGAGATGAAGTCTCGGTGCATTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
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| CDS-3UTR TCA 90 bp | TCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCTTGGGCTCCTTCACTaGAGAATACCTTCTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRDLETEEALAVRRQIRLGLLH*RIPSLS Trigger: GGATAAAGAAGGTATTCTTCAGTGAAGGAGCCCAAG...CCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS-3UTR GCA 90 bp | TCGAACTCAGAAATCCACCTGCCTCTGCCTCGCAAGTGCTGGGATCGGACTCACCTTCTCGATCAACATTaGATCATCATTGAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SNSEIHLPLPRKCWDRTHLLDQH*IIIERL Trigger: AAGTCTTTCAATGATGATGCAATGTTGATCGAGAAG...GTGAGTCCGATCCCAGCACTTGCGAGGCAGAGGCAGGTGGATTTCTGAGTTCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
||
| CDS-3UTR GCA 90 bp | TGCACCGAGACTTCATCTCTTTGTAGACAAGGCTGGCCTCGAACTCAGAAATCCTTCAAACAAGTACACTaGGTTGCCATGGTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: CTETSSLCRQGWPRTQKSFKQVH*VAMVIT Trigger: GGTGATCACCATGGCAACGCAGTGTACTTGTTTGAA...GGATTTCTGAGTTCGAGGCCAGCCTTGTCTACAAAGAGATGAAGTCTCGGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
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| CDS-3UTR GCA 90 bp | CTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCGCGACTTGTTGTCAATCTaGATATCATATGACCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LRDLETEEALAVRRQIRRDLLSI*ISYDPS Trigger: CGATGGGTCATATGATATGCAGATTGACAACAAGTC...GCGCCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS-3UTR CCA 90 bp | TCTTCTGATGTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACTGCGTCCATATCTACATGCATaGAATTCCGGTCGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSDVASAHYSLFQTSTLRPYLHA*NSGRPH Trigger: GTGAGGCCGACCGGAATTCCATGCATGTAGATATGG...ACGCAGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| CDS-3UTR CCA 90 bp | GTCCAGGAGGATGAACTTGGATTTACGGGCTACCCCATTAATAGAAGACTTCAGGTAGCTCTGCTGAGATaGAGCAGGGCCAATGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: VQEDELGFTGYPINRRLQVALLR*SRANGI Trigger: TATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTAC...CTGAAGTCTTCTATTAATGGGGTAGCCCGTAAATCCAAGTTCATCCTCCTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGGACTCTAACTGCTCTTaGAATTCTCTCTCTGATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLRDLETEEALAVRRQDSNCS*NSLSDL Trigger: TAGATCAGAGAGAGAATTCCAAGAGCAGTTAGAGTC...CTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR TCA 90 bp | ACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACTGCGATCTCCCACTGCTGAATaGAAACGGAGAGAATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TDKALCGRLFLSGHSSLRSPTAE*KRRELI Trigger: GATCAATTCTCTCCGTTTTCATTCAGCAGTGGGAGA...TCGCAGTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR TCA 90 bp | CTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCGCTATACGTCACAGCTATaGCTATATCACTTTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRDLETEEALAVRRQIRRYTSQL*LYHFYH Trigger: GTGGTAAAAGTGATATAGTCATAGCTGTGACGTATA...GCGCCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGAATTTCTCCTCTGTTTaGAATGAGGACCTTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLRDLETEEALAVRRQNFSSV*NEDLGN Trigger: ATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATT...CTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | ATTGCCATCAGGGGTAACTACAAAGCCACTCACCTACAGGACTATTCCTCTTCTCTGTTCGTATCACCCTaGAGGCAATTTCTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IAIRGNYKATHLQDYSSSLFVSP*RQFLLC Trigger: ACAGAGGAGAAATTGCCTGCAGGGTGATACGAACAG...AGAAGAGGAATAGTCCTGTAGGTGAGTGGCTTTGTAGTTACCCCTGATGGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | AAGTCAGTCCCTGTGATCATTTCAGTGACAGGATGTTCCACTTGTAGCCTGGTGACCCATGTCTCTAATTaGAGACGAAGGAGGACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KSVPVIISVTGCSTCSLVTHVSN*RRRRTY Trigger: ATAGGTCCTCCTTCGTCTGCAATTAGAGACATGGGT...CACCAGGCTACAAGTGGAACATCCTGTCACTGAAATGATCACAGGGACTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | GATCTTCTGATGTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACTGCCGGGCTGACTCTAACTaGTCTTGGAATTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLMSPLHTTVSFKQVHCRADSN*SWNSLS Trigger: AGAGAGAGAATTCCAAGAGCAGTTAGAGTCAGCCCG...GCAGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | ACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACTGCGAACAAGTACACTGCGTTaGCATGGTGATCACCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TDKALCGRLFLSGHSSLRTSTLR*HGDHQT Trigger: TGTTTGGTGATCACCATGGCAACGCAGTGTACTTGT...TCGCAGTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR CCA 90 bp | CGCAGACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACTTGTTCCATACTTCATaGTTCTCAACTTCCAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRQIRRYAVVYFFLDTVHLFHTS*FSTSKP Trigger: GGGCTTGGAAGTTGAGAACCATGAAGTATGGAACAA...GTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGTCTGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR CCA 90 bp | CGCAGACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACAGAGGGATTTCTTCCTaGCTCAAAGGAATCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRQIRRYAVVYFFLDTVHRGISS*LKGIFS Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATCCCTCT...GTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGTCTGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| CDS-3UTR CCA 90 bp | CGCAGACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACCAAGTACTTGGGCACTaGAATGCCAACTTCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: RRQIRRYAVVYFFLDTVHQVLGH*NANFNT Trigger: AGTATTGAAGTTGGCATTCCAGTGCCCAAGTACTTG...GTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGTCTGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
||
| 3UTR CAA 72 bp | TCAATACTGCCTTCCATAGAAAACAGGTGGACAGTGTaGTCCAGGAGGATGAACTTGGATTTACGGGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: SILPSIENRWTV*SRRMNLDLRAT Trigger: GGTAGCCCGTAAATCCAAGTTCATCCTCCTGGACAACACTGTCCACCTGTTTTCTATGGAAGGCAGTATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| 3UTR CAA 72 bp | CACAAGGACAAGAGACAAGTAACACTCGTGTCCTGCTaGATGACGTTACTGTTGGCTGAGTTTAGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HKDKRQVTLVSC*MTLLLAEFSSV Trigger: CACAGAGCTAAACTCAGCCAACAGTAACGTCATCAAGCAGGACACGAGTGTTACTTGTCTCTTGTCCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
||
| CDS-3UTR GCA 90 bp | CTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCGCAAAATGATTCCCTCTTaGTTACAAAGTTCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRDLETEEALAVRRQIRRKMIPS*LQSSAN Trigger: GTTTGCTGAACTTTGTAAGCAAGAGGGAATCATTTT...GCGCCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCACGAACTTCTCGATCAACATTGCATCATCATTGAAAGACTTCTTCGCGTAGCTCTGCTGAGATaGAGCAGGGCCAATGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SVHELLDQHCIIIERLLRVALLR*SRANGI Trigger: TATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTAC...GCGAAGAAGTCTTTCAATGATGATGCAATGTTGATCGAGAAGTTCGTGGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS-3UTR CCA 90 bp | TATAATCACACCATCATTGATTTAATAAAGCTCCTCTCTCCGAGATCTAGAGACCGTAGCCTGGATGGATaGCCTGTGCTGCAGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YNHTIIDLIKLLSPRSRDRSLDG*PVLQSS Trigger: AGAGCTCTGCAGCACAGGCCATCCATCCAGGCTACG...GTCTCTAGATCTCGGAGAGAGGAGCTTTATTAAATCAATGATGGTGTGATTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| 3UTR CAA 72 bp | TCCTCCTCCTCAAATTCCACTAAAGGTGCATGTCTGTaGGCTTGGGCTCCTTCACTGAAGAATACCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSNSTKGACL*AWAPSLKNTFF Trigger: AAAGAAGGTATTCTTCAGTGAAGGAGCCCAAGCCAACAGACATGCACCTTTAGTGGAATTTGAGGAGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| CDS-3UTR TCA 90 bp | TATAATCACACCATCATTGATTTAATAAAGCTCCTCTCTCCGAGATCTAGAGACCTGGGGCCTCCTCAATaGTCTTCTGATGTCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YNHTIIDLIKLLSPRSRDLGPPQ*SSDVAS Trigger: AGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG...GTCTCTAGATCTCGGAGAGAGGAGCTTTATTAAATCAATGATGGTGTGATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS-3UTR GCA 90 bp | TCTCAGGCACTGATCAGACTGGTCCTTGCCATGGTAACCTTCCACAACAGGAACAAAATGATTCCCTCTTaGTTACAAAGTTCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQALIRLVLAMVTFHNRNKMIPS*LQSSAN Trigger: GTTTGCTGAACTTTGTAAGCAAGAGGGAATCATTTT...GTTCCTGTTGTGGAAGGTTACCATGGCAAGGACCAGTCTGATCAGTGCCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS-3UTR GCA 90 bp | CGCAGACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACCTTCTCGATCAACATTaGATCATCATTGAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: RRQIRRYAVVYFFLDTVHLLDQH*IIIERL Trigger: AAGTCTTTCAATGATGATGCAATGTTGATCGAGAAG...GTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGTCTGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS-3UTR CCA 90 bp | TATAATCACACCATCATTGATTTAATAAAGCTCCTCTCTCCGAGATCTAGAGACCAACGGTCCAGCCCCTaGCATGAAGTTATTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNHTIIDLIKLLSPRSRDQRSSP*HEVIVR Trigger: CCTGACAATAACTTCATGCCAGGGGCTGGACCGTTG...GTCTCTAGATCTCGGAGAGAGGAGCTTTATTAAATCAATGATGGTGTGATTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS-3UTR CCA 90 bp | ATCTTCATGGCAATCATAACCATCAGAGAGTCTCCAGCTTTTACTCTGTCTCCAGACTCTAACTGCTCTTaGAATTCTCTCTCTGATCTA | + |
|
Preference number: 4 (lower is better) Translates to: IFMAIITIRESPAFTLSPDSNCS*NSLSDL Trigger: TAGATCAGAGAGAGAATTCCAAGAGCAGTTAGAGTC...TGGAGACAGAGTAAAAGCTGGAGACTCTCTGATGGTTATGATTGCCATGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| CDS-3UTR TCA 90 bp | TATAATCACACCATCATTGATTTAATAAAGCTCCTCTCTCCGAGATCTAGAGACTCTTGGCCACTTGAATaGTTTTCTCCATTGCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YNHTIIDLIKLLSPRSRDSWPLE*FSPLRG Trigger: ACCTCGCAATGGAGAAAATCATTCAAGTGGCCAAGA...GTCTCTAGATCTCGGAGAGAGGAGCTTTATTAAATCAATGATGGTGTGATTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS-3UTR GCA 90 bp | TATAATCACACCATCATTGATTTAATAAAGCTCCTCTCTCCGAGATCTAGAGACTTCAAACAAGTACACTaGGTTGCCATGGTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: YNHTIIDLIKLLSPRSRDFKQVH*VAMVIT Trigger: GGTGATCACCATGGCAACGCAGTGTACTTGTTTGAA...GTCTCTAGATCTCGGAGAGAGGAGCTTTATTAAATCAATGATGGTGTGATTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS-3UTR GCA 90 bp | ATCTTCATGGCAATCATAACCATCAGAGAGTCTCCAGCTTTTACTCTGTCTCCACTTCTCGATCAACATTaGATCATCATTGAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: IFMAIITIRESPAFTLSPLLDQH*IIIERL Trigger: AAGTCTTTCAATGATGATGCAATGTTGATCGAGAAG...TGGAGACAGAGTAAAAGCTGGAGACTCTCTGATGGTTATGATTGCCATGAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| CDS-3UTR GCA 90 bp | TATAATCACACCATCATTGATTTAATAAAGCTCCTCTCTCCGAGATCTAGAGACAATTTCTCCTCTGTTTaGAATGAGGACCTTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YNHTIIDLIKLLSPRSRDNFSSV*NEDLGN Trigger: ATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATT...GTCTCTAGATCTCGGAGAGAGGAGCTTTATTAAATCAATGATGGTGTGATTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS-3UTR GCA 90 bp | GAATTGATCTTGAGTGTGGAGTTTAAAAGCGCTGGTCATTTCTTTCTCTTTGAGAAAATGATTCCCTCTTaGTTACAAAGTTCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELILSVEFKSAGHFFLFEKMIPS*LQSSAN Trigger: GTTTGCTGAACTTTGTAAGCAAGAGGGAATCATTTT...CTCAAAGAGAAAGAAATGACCAGCGCTTTTAAACTCCACACTCAAGATCAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| CDS GCA 90 bp | CTGAGATGGAGCAGGGCCAATGGAATATGCCTCGTCTGCCTCGGCTaGAGCAGCAGGATCGGGACCCGTCGCAACTGGTTCCTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LRWSRANGICLVCLG*SSRIGTRRNWFLST Trigger: GGTGGACAGGAACCAGTTGCGACGGGTCCCGATCCTGCTGCTGCAGCCGAGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS GCA 90 bp | CATTGCGAGGTAGCTCTGCTGAGATGGAGCAGGGCCAATGGAATATaGCTCGTCTGCCTCGGCTGCAGCAGCAGGATCGGGACCCGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: HCEVALLRWSRANGI*LVCLGCSSRIGTRR Trigger: GCGACGGGTCCCGATCCTGCTGCTGCAGCCGAGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTACCTCGCAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS GCA 90 bp | GTAGCTCTGCTGAGATGGAGCAGGGCCAATGGAATATGCCTCGTCTaGCTCGGCTGCAGCAGCAGGATCGGGACCCGTCGCAACTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VALLRWSRANGICLV*LGCSSRIGTRRNWF Trigger: GAACCAGTTGCGACGGGTCCCGATCCTGCTGCTGCAGCCGAGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS CCA 90 bp | TTTTCTCCATTGCGAGGTAGCTCTGCTGAGATGGAGCAGGGCCAATaGAATATGCCTCGTCTGCCTCGGCTGCAGCAGCAGGATCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSPLRGSSAEMEQGQ*NMPRLPRLQQQDRD Trigger: GTCCCGATCCTGCTGCTGCAGCCGAGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTACCTCGCAATGGAGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS TCA 90 bp | AGCCTGGATGGATGGCCTGTGCTGCAGAGCTCTTGGCCACTTGAATaGTTTTCTCCATTGCGAGGTAGCTCTGCTGAGATGGAGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLDGWPVLQSSWPLE*FSPLRGSSAEMEQG Trigger: GCCCTGCTCCATCTCAGCAGAGCTACCTCGCAATGGAGAAAATCATTCAAGTGGCCAAGAGCTCTGCAGCACAGGCCATCCATCCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 ENSMUST00000200162.2 |
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| CDS CCA 90 bp | GGCCACTTGAATGATTTTCTCCATTGCGAGGTAGCTCTGCTGAGATaGAGCAGGGCCAATGGAATATGCCTCGTCTGCCTCGGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHLNDFLHCEVALLR*SRANGICLVCLGCS Trigger: GCTGCAGCCGAGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTACCTCGCAATGGAGAAAATCATTCAAGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS GCA 90 bp | ACATGCATGGAATTCCGGTCGGCCTCACTGTACACAGCCACCGACTaGACACCCATCTTTTTGGCTGTTCGTATCACCCTGCAGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: TCMEFRSASLYTATD*TPIFLAVRITLQAI Trigger: AATTGCCTGCAGGGTGATACGAACAGCCAAAAAGATGGGTGTGCAGTCGGTGGCTGTGTACAGTGAGGCCGACCGGAATTCCATGCATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS GCA 90 bp | AATCCAATCTTGCCGGACTCCAGTTTCAATCCTCGTAGACATGTCTaGCGAAGGGGTAGAGAGATGAACCAACGGTCCAGCCCCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NPILPDSSFNPRRHV*RRGREMNQRSSPWH Trigger: ATGCCAGGGGCTGGACCGTTGGTTCATCTCTCTACCCCTTCGGCAGACATGTCTACGAGGATTGAAACTGGAGTCCGGCAAGATTGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
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| CDS CCA 90 bp | GGTCGGCCTCACTGTACACAGCCACCGACTGCACACCCATCTTTTTaGCTGTTCGTATCACCCTGCAGGCAATTTCTCCTCTGTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GRPHCTQPPTAHPSF*LFVSPCRQFLLCLQ Trigger: TTGCAAACAGAGGAGAAATTGCCTGCAGGGTGATACGAACAGCCAAAAAGATGGGTGTGCAGTCGGTGGCTGTGTACAGTGAGGCCGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS-3UTR CAA 90 bp | TCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGTGCTGCAATCCTGAGTaGCCACTCCACCAAGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLRDLETEEALAVRRQIRCCNPE*PLHQVS Trigger: ACTGACTTGGTGGAGTGGCAACTCAGGATTGCAGCA...CCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS-3UTR CAA 90 bp | ACCGAGACTTCATCTCTTTGTAGACAAGGCTGGCCTCGAACTCAGAAATCCACCTGCTGCAATCCTGAGTaGCCACTCCACCAAGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TETSSLCRQGWPRTQKSTCCNPE*PLHQVS Trigger: ACTGACTTGGTGGAGTGGCAACTCAGGATTGCAGCA...GGTGGATTTCTGAGTTCGAGGCCAGCCTTGTCTACAAAGAGATGAAGTCTCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
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| CDS CCA 90 bp | TTTTCTCCATTGCGAGGTAGCTCTGCTGAGATGGAGCAGGGCCAATaGAATATGCCTCGTCTGCCATATCTACATGCATGGAATTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSPLRGSSAEMEQGQ*NMPRLPYLHAWNSG Trigger: ACCGGAATTCCATGCATGTAGATATGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTACCTCGCAATGGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CCA 90 bp | GGCCACTTGAATGATTTTCTCCATTGCGAGGTAGCTCTGCTGAGATaGAGCAGGGCCAATGGAATATGCCTCGTCTGCCATATCTACATG | + |
|
Preference number: 5 (lower is better) Translates to: GHLNDFLHCEVALLR*SRANGICLVCHIYM Trigger: CATGTAGATATGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTACCTCGCAATGGAGAAAATCATTCAAGTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS-3UTR CAA 90 bp | CTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGCGCTTATCCTGCCATCCTTaGGAGCCTTTATGGTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRDLETEEALAVRRQIRRLSCHP*EPLWYA Trigger: AGCATACCATAAAGGCTCCAAAGGATGGCAGGATAA...GCGCCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS TCA 90 bp | ACCTTGGAGTGTCCACGAACTTCTCGATCAACATTGCATCATCATTaGAAGACTTCTTCGCCTCCCTCCGGGCTGACTCTAACTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLECPRTSRSTLHHH*KTSSPPSGLTLTAL Trigger: AAGAGCAGTTAGAGTCAGCCCGGAGGGAGGCGAAGAAGTCTTTCAATGATGATGCAATGTTGATCGAGAAGTTCGTGGACACTCCAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| CDS-3UTR CAA 90 bp | TCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGATAAGGTTTGCAATGAGGACCTaGGTAATACTTCCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLRDLETEEALAVRRQIRFAMRT*VILPPG Trigger: CCCAGGAGGAAGTATTACCAAGGTCCTCATTGCAAA...CCTTATCTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS-3UTR CAA 90 bp | AGCTCCTCTCTCCGAGATCTAGAGACTGAAGAGGCACTTGCTGTTCGCAGACAGCGGAGAGAATTGATCTaGAGTGTGGAGTTTAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLRDLETEEALAVRRQRRELI*SVEFKS Trigger: GCTTTTAAACTCCACACTCAAGATCAATTCTCTCCG...CTGTCTGCGAACAGCAAGTGCCTCTTCAGTCTCTAGATCTCGGAGAGAGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS GCA 90 bp | TCACTGGAAAGATCGCCCAGGACTCGGAAGGACTTGTTGTCAATCTaGATATCATATGACCCATCGCGGTTATACGTCACAGCTATGACT | + |
|
Preference number: 5 (lower is better) Translates to: SLERSPRTRKDLLSI*ISYDPSRLYVTAMT Trigger: AGTCATAGCTGTGACGTATAACCGCGATGGGTCATATGATATGCAGATTGACAACAAGTCCTTCCGAGTCCTGGGCGATCTTTCCAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS-3UTR CAA 90 bp | ACAGATAAGGCGCTATGCGGTCGTCTATTTCTTTCTGGACACAGTTCACTGCGAGTCATTTCTTTCTCTTaGAGGATGAGCCCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TDKALCGRLFLSGHSSLRVISFS*RMSPRA Trigger: AGCTCTGGGGCTCATCCTCAAAGAGAAAGAAATGAC...TCGCAGTGAACTGTGTCCAGAAAGAAATAGACGACCGCATAGCGCCTTATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS GCA 90 bp | CTTTTTGGCTGTTCGTATCACCCTGCAGGCAATTTCTCCTCTGTTTaGAATGAGGACCTTGGTAATACTTCCTCCTGGGGTTGTTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: LFGCSYHPAGNFSSV*NEDLGNTSSWGCSI Trigger: TATGGAACAACCCCAGGAGGAAGTATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATTGCCTGCAGGGTGATACGAACAGCCAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS-3UTR CAA 90 bp | ACCGAGACTTCATCTCTTTGTAGACAAGGCTGGCCTCGAACTCAGAAATCCACCAACATTGCATCATCATaGAAAGACTTCTTCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TETSSLCRQGWPRTQKSTNIASS*KDFFAS Trigger: GGAGGCGAAGAAGTCTTTCAATGATGATGCAATGTT...GGTGGATTTCTGAGTTCGAGGCCAGCCTTGTCTACAAAGAGATGAAGTCTCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200163.2 |
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| CDS CCA 90 bp | AATTTCTCCTCTGTTTGCAATGAGGACCTTGGTAATACTTCCTCCTaGGGTTGTTCCATACTTCATGGTTCTCAACTTCCAAGCCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: NFSSVCNEDLGNTSS*GCSILHGSQLPSPF Trigger: GAATGGGCTTGGAAGTTGAGAACCATGAAGTATGGAACAACCCCAGGAGGAAGTATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS-3UTR CAA 90 bp | CGTCACAGCTATGACTATATCACTTTTACCACTTCTCAGAGTCATGTTCCTGGTTTTGCAATGAGGACCTaGGTAATACTTCCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RHSYDYITFTTSQSHVPGFAMRT*VILPPG Trigger: CCCAGGAGGAAGTATTACCAAGGTCCTCATTGCAAA...ACCAGGAACATGACTCTGAGAAGTGGTAAAAGTGATATAGTCATAGCTGTGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| CDS-3UTR CAA 90 bp | GTCCAGGAGGATGAACTTGGATTTACGGGCTACCCCATTAATAGAAGACTTCAGAACATTGCATCATCATaGAAAGACTTCTTCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VQEDELGFTGYPINRRLQNIASS*KDFFAS Trigger: GGAGGCGAAGAAGTCTTTCAATGATGATGCAATGTT...CTGAAGTCTTCTATTAATGGGGTAGCCCGTAAATCCAAGTTCATCCTCCTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| CDS GCA 90 bp | AGCCATGATGGACTTGGACGTGCTCTTTATACCCATGTCTCTAATTaGAGACGAAGGAGGACCTATAAAAATGATTCCCTCTTGCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: SHDGLGRALYTHVSN*RRRRTYKNDSLLLT Trigger: TGTAAGCAAGAGGGAATCATTTTTATAGGTCCTCCTTCGTCTGCAATTAGAGACATGGGTATAAAGAGCACGTCCAAGTCCATCATGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS-3UTR CAA 90 bp | TATAATCACACCATCATTGATTTAATAAAGCTCCTCTCTCCGAGATCTAGAGACAACATTGCATCATCATaGAAAGACTTCTTCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YNHTIIDLIKLLSPRSRDNIASS*KDFFAS Trigger: GGAGGCGAAGAAGTCTTTCAATGATGATGCAATGTT...GTCTCTAGATCTCGGAGAGAGGAGCTTTATTAAATCAATGATGGTGTGATTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS GCA 72 bp | CTGAGATGGAGCAGGGCCAATGGAATATGCCTCGTCTaGCTCGGCTGCAGCAGCAGGATCGGGACCCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LRWSRANGICLV*LGCSSRIGTRR Trigger: GCGACGGGTCCCGATCCTGCTGCTGCAGCCGAGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS GCA 72 bp | AGCAGGGCCAATGGAATATGCCTCGTCTGCCTCGGCTaGAGCAGCAGGATCGGGACCCGTCGCAACTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRANGICLVCLG*SSRIGTRRNWF Trigger: GAACCAGTTGCGACGGGTCCCGATCCTGCTGCTGCAGCCGAGGCAGACGAGGCATATTCCATTGGCCCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS GCA 72 bp | GTAGCTCTGCTGAGATGGAGCAGGGCCAATGGAATATaGCTCGTCTGCCTCGGCTGCAGCAGCAGGATCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VALLRWSRANGI*LVCLGCSSRIG Trigger: CCCGATCCTGCTGCTGCAGCCGAGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS GCA 72 bp | GAATTCCGGTCGGCCTCACTGTACACAGCCACCGACTaGACACCCATCTTTTTGGCTGTTCGTATCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EFRSASLYTATD*TPIFLAVRITL Trigger: CAGGGTGATACGAACAGCCAAAAAGATGGGTGTGCAGTCGGTGGCTGTGTACAGTGAGGCCGACCGGAATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CAA 90 bp | CGGTCGGCCTCACTGTACACAGCCACCGACTGCACACCCATCTTTTaGGCTGTTCGTATCACCCTGCAGGCAATTTCTCCTCTGTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSASLYTATDCTPIF*AVRITLQAISPLFA Trigger: TGCAAACAGAGGAGAAATTGCCTGCAGGGTGATACGAACAGCCAAAAAGATGGGTGTGCAGTCGGTGGCTGTGTACAGTGAGGCCGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CAA 90 bp | ACCGTAGCCTGGATGGATGGCCTGTGCTGCAGAGCTCTTGGCCACTaGAATGATTTTCTCCATTGCGAGGTAGCTCTGCTGAGATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TVAWMDGLCCRALGH*NDFLHCEVALLRWS Trigger: GCTCCATCTCAGCAGAGCTACCTCGCAATGGAGAAAATCATTCAAGTGGCCAAGAGCTCTGCAGCACAGGCCATCCATCCAGGCTACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 ENSMUST00000200162.2 |
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| CDS GCA 72 bp | GGGCCAATGGAATATGCCTCGTCTGCCATATCTACATaGATGGAATTCCGGTCGGCCTCACTGTACACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPMEYASSAIST*MEFRSASLYTA Trigger: GGCTGTGTACAGTGAGGCCGACCGGAATTCCATGCATGTAGATATGGCAGACGAGGCATATTCCATTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CCA 72 bp | CACTGTACACAGCCACCGACTGCACACCCATCTTTTTaGCTGTTCGTATCACCCTGCAGGCAATTTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: HCTQPPTAHPSF*LFVSPCRQFLL Trigger: GAGGAGAAATTGCCTGCAGGGTGATACGAACAGCCAAAAAGATGGGTGTGCAGTCGGTGGCTGTGTACAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CCA 72 bp | CAATGGAATATGCCTCGTCTGCCATATCTACATGCATaGAATTCCGGTCGGCCTCACTGTACACAGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: QWNMPRLPYLHA*NSGRPHCTQPP Trigger: CGGTGGCTGTGTACAGTGAGGCCGACCGGAATTCCATGCATGTAGATATGGCAGACGAGGCATATTCCATTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CCA 72 bp | AGCAAACTCCATGTTTTCCGAAAGAAAACCGTAGCCTaGATGGATGGCCTGTGCTGCAGAGCTCTTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SKLHVFRKKTVA*MDGLCCRALGH Trigger: GTGGCCAAGAGCTCTGCAGCACAGGCCATCCATCCAGGCTACGGTTTTCTTTCGGAAAACATGGAGTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 ENSMUST00000200162.2 |
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| CDS GCA 72 bp | GTAGCTCTGCTGAGATGGAGCAGGGCCAATGGAATATaGCTCGTCTGCCATATCTACATGCATGGAATTCCG | + |
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Preference number: 6 (lower is better) Translates to: VALLRWSRANGI*LVCHIYMHGIP Trigger: CGGAATTCCATGCATGTAGATATGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CCA 72 bp | AATGATTTTCTCCATTGCGAGGTAGCTCTGCTGAGATaGAGCAGGGCCAATGGAATATGCCTCGTCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: NDFLHCEVALLR*SRANGICLVCL Trigger: GAGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTACCTCGCAATGGAGAAAATCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200162.2 |
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| CDS CAA 72 bp | TCACTGTACACAGCCACCGACTGCACACCCATCTTTTaGGCTGTTCGTATCACCCTGCAGGCAATTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLYTATDCTPIF*AVRITLQAISP Trigger: AGGAGAAATTGCCTGCAGGGTGATACGAACAGCCAAAAAGATGGGTGTGCAGTCGGTGGCTGTGTACAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CAA 90 bp | GACCTTGGAGTGTCCACGAACTTCTCGATCAACATTGCATCATCATaGAAAGACTTCTTCGCCTCCCTCCGGGCTGACTCTAACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: DLGVSTNFSINIASS*KDFFASLRADSNCS Trigger: AGAGCAGTTAGAGTCAGCCCGGAGGGAGGCGAAGAAGTCTTTCAATGATGATGCAATGTTGATCGAGAAGTTCGTGGACACTCCAAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199113.5 |
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| CDS CCA 72 bp | AATGATTTTCTCCATTGCGAGGTAGCTCTGCTGAGATaGAGCAGGGCCAATGGAATATGCCTCGTCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: NDFLHCEVALLR*SRANGICLVCH Trigger: ATGGCAGACGAGGCATATTCCATTGGCCCTGCTCCATCTCAGCAGAGCTACCTCGCAATGGAGAAAATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS GCA 72 bp | TGTTCGTATCACCCTGCAGGCAATTTCTCCTCTGTTTaGAATGAGGACCTTGGTAATACTTCCTCCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: CSYHPAGNFSSV*NEDLGNTSSWG Trigger: ACCCCAGGAGGAAGTATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATTGCCTGCAGGGTGATACGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS GCA 72 bp | AGATCGCCCAGGACTCGGAAGGACTTGTTGTCAATCTaGATATCATATGACCCATCGCGGTTATACGTCACA | + |
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Preference number: 6 (lower is better) Translates to: RSPRTRKDLLSI*ISYDPSRLYVT Trigger: TGTGACGTATAACCGCGATGGGTCATATGATATGCAGATTGACAACAAGTCCTTCCGAGTCCTGGGCGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029259.10 |
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| CDS CAA 90 bp | CGTATCACCCTGCAGGCAATTTCTCCTCTGTTTGCAATGAGGACCTaGGTAATACTTCCTCCTGGGGTTGTTCCATACTTCATGGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: RITLQAISPLFAMRT*VILPPGVVPYFMVL Trigger: GAGAACCATGAAGTATGGAACAACCCCAGGAGGAAGTATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATTGCCTGCAGGGTGATACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CAA 72 bp | CTGCAGGCAATTTCTCCTCTGTTTGCAATGAGGACCTaGGTAATACTTCCTCCTGGGGTTGTTCCATACTTC | + |
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Preference number: 6 (lower is better) Translates to: LQAISPLFAMRT*VILPPGVVPYF Trigger: GAAGTATGGAACAACCCCAGGAGGAAGTATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATTGCCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS GCA 72 bp | GGACTTGGACGTGCTCTTTATACCCATGTCTCTAATTaGAGACGAAGGAGGACCTATAAAAATGATTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GLGRALYTHVSN*RRRRTYKNDSL Trigger: GAGGGAATCATTTTTATAGGTCCTCCTTCGTCTGCAATTAGAGACATGGGTATAAAGAGCACGTCCAAGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CCA 72 bp | TCTGTTTGCAATGAGGACCTTGGTAATACTTCCTCCTaGGGTTGTTCCATACTTCATGGTTCTCAACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SVCNEDLGNTSS*GCSILHGSQLP Trigger: TGGAAGTTGAGAACCATGAAGTATGGAACAACCCCAGGAGGAAGTATTACCAAGGTCCTCATTGCAAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS GCA 72 bp | GCAGACGAAGGAGGACCTATAAAAATGATTCCCTCTTaGTTACAAAGTTCAGCAAACTCCATGTTTTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: ADEGGPIKMIPS*LQSSANSMFSE Trigger: TTCGGAAAACATGGAGTTTGCTGAACTTTGTAAGCAAGAGGGAATCATTTTTATAGGTCCTCCTTCGTCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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| CDS CAA 72 bp | TGCAGACGAAGGAGGACCTATAAAAATGATTCCCTCTaGCTTACAAAGTTCAGCAAACTCCATGTTTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: CRRRRTYKNDSL*LTKFSKLHVFR Trigger: TCGGAAAACATGGAGTTTGCTGAACTTTGTAAGCAAGAGGGAATCATTTTTATAGGTCCTCCTTCGTCTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029259.10 ENSMUST00000199113.5 |
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