Pregenerated sensors for MCAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048755Ensembl transcript IDs: ENSMUST00000061882.10, ENSMUST00000229724.2, ENSMUST00000230672.2, ENSMUST00000230851.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCCACATGGCTGTAGGACTTCCACGCCTGCCTGTTGCAGCACTTaGGGATGCTTCCCAGCTGCTGCCCGGGGCCCACCTCGTAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: HPHGCRTSTPACCST*GCFPAAARGPPRRC Trigger: GCACCTACGAGGTGGGCCCCGGGCAGCAGCTGGGAAGCATCCTCAAGTGCTGCAACAGGCAGGCGTGGAAGTCCTACAGCCATGTGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR TCA 90 bp | CACTGGGGCCATTCTAAGCCCAAGGCCCTCAGGGGTCAGGATCCATaGTGTTCTGCATCACATCCACATGGCTGTAGGACTTCCACGCCT | + |
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Preference number: 1 (lower is better) Translates to: HWGHSKPKALRGQDP*CSASHPHGCRTSTP Trigger: AGGCGTGGAAGTCCTACAGCCATGTGGATGTGATGCAGAACATCATGGATCCTGACCCCTGAGGGCCTTGGGCTTAGAATGGCCCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR TCA 90 bp | CACTGTCCCATGGATGACCTGCTGTTGGTGGTGTCTCTGTGTGAATaGACACAGGCTGGCCTAGGAAAGACAGGGTTCCCACTCCACACC | + |
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Preference number: 1 (lower is better) Translates to: HCPMDDLLLVVSLCE*TQAGLGKTGFPLHT Trigger: GGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCCAGCCTGTGTTCATTCACACAGAGACACCACCAACAGCAGGTCATCCATGGGACAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR TCA 90 bp | CTTCCCAGGAGCATTGCCCCACTCCTGCTGTGGAGCAGACTGCTCTaGGGAAGCCATAAACACAGTATGAGACACACTGTCCCATGGATG | + |
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Preference number: 1 (lower is better) Translates to: LPRSIAPLLLWSRLL*GSHKHSMRHTVPWM Trigger: CATCCATGGGACAGTGTGTCTCATACTGTGTTTATGGCTTCCTCAGAGCAGTCTGCTCCACAGCAGGAGTGGGGCAATGCTCCTGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR GCA 90 bp | TGCTGCCCTAGCAGCTTTCGGATGTGTTGTGGATGTGTGTACTTCTaGCCACTGACATTGGAATGGACGGCAACCAGTGGCTTCTTGATG | + |
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Preference number: 1 (lower is better) Translates to: CCPSSFRMCCGCVYF*PLTLEWTATSGFLM Trigger: CATCAAGAAGCCACTGGTTGCCGTCCATTCCAATGTCAGTGGGCAGAAGTACACACATCCACAACACATCCGAAAGCTGCTAGGGCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR TCA 90 bp | GGACCACCCATTCTAGGACATACACAGGCACTTAATAAGTGCTTCTaGGGTCTGTATGGCACACGGGACTCAATCTCCCACCTGCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: GPPILGHTQALNKCF*GLYGTRDSISHLPS Trigger: ACTTGGCAGGTGGGAGATTGAGTCCCGTGTGCCATACAGACCTCAGAAGCACTTATTAAGTGCCTGTGTATGTCCTAGAATGGGTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR GCA 90 bp | AGTGCTTCTGAGGTCTGTATGGCACACGGGACTCAATCTCCCACCTaGCAAGTGAGTGAAGAACAAGGCCACCACACCTTGATTCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: SASEVCMAHGTQSPT*QVSEEQGHHTLIQD Trigger: ATCTTGAATCAAGGTGTGGTGGCCTTGTTCTTCACTCACTTGGCAGGTGGGAGATTGAGTCCCGTGTGCCATACAGACCTCAGAAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAGCTGCTGCCCGGGGCCCACCTCGTAGGTGCTGGGGAACTCCATGCCTTCAGGGGATCCACGGCTaGCTCCATGAGGCAGGTATG | + |
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Preference number: 2 (lower is better) Translates to: FPAAARGPPRRCWGTPCLQGIHG*LHEAGM Trigger: CATACCTGCCTCATGGAGCCAGCCGTGGATCCCCTG...AAGGCATGGAGTTCCCCAGCACCTACGAGGTGGGCCCCGGGCAGCAGCTGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAGCTGCTGCCCGGGGCCCACCTCGTAGGTGCTGGGGAACTCCATGCCTTCATCGTCCTCAAGTCTaGGGAAAAGAGGCAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: FPAAARGPPRRCWGTPCLHRPQV*GKEAGT Trigger: TGTGCCTGCCTCTTTTCCTCAGACTTGAGGACGATG...AAGGCATGGAGTTCCCCAGCACCTACGAGGTGGGCCCCGGGCAGCAGCTGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCATCACATCCACATGGCTGTAGGACTTCCACGCCTGCCTGTTGCAGCACTTAGGATGCTTCCCAGCTaGTGCCCGGGGCCCACCTCG | + |
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Preference number: 2 (lower is better) Translates to: LHHIHMAVGLPRLPVAALRMLPS*CPGPTS Trigger: CGAGGTGGGCCCCGGGCAGCAGCTGGGAAGCATCCT...AAGTGCTGCAACAGGCAGGCGTGGAAGTCCTACAGCCATGTGGATGTGATGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAGCTGCTGCCCGGGGCCCACCTCGTAGGTGCTGGGGAACTCCATGCCTTCTTTCGGATGTGTTGTaGATGTGTGTACTTCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: FPAAARGPPRRCWGTPCLLSDVL*MCVLLP Trigger: GGGCAGAAGTACACACATCCACAACACATCCGAAAG...AAGGCATGGAGTTCCCCAGCACCTACGAGGTGGGCCCCGGGCAGCAGCTGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTAGGAAAGACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCTGCTCTGAGGGAGCCTaGGCCACAGCTGAGACTGCA | + |
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Preference number: 2 (lower is better) Translates to: GLGKTGFPLHTLHGSPSFCSEGA*ATAETA Trigger: TGCAGTCTCAGCTGTGGCTCAGGCTCCCTCAGAGCA...GAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR-3UTR CCA 90 bp | GGCCTAGGAAAGACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCACCGAGGAACATGGTTaGGTGCAGAGGCAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GLGKTGFPLHTLHGSPSFTEEHG*VQRQSS Trigger: GCTGCTCTGCCTCTGCACCCAACCATGTTCCTCGGT...GAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR CAA 90 bp | TGCCCACTGACATTGGAATGGACGGCAACCAGTGGCTTCTTGATGTaGATCGAGCCTAGAACTTTCATCAGGGGATCCACGGCTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: CPLTLEWTATSGFLM*IEPRTFIRGSTAGS Trigger: GGAGCCAGCCGTGGATCCCCTGATGAAAGTTCTAGGCTCGATCAACATCAAGAAGCCACTGGTTGCCGTCCATTCCAATGTCAGTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCCCATGGATGACCTGCTGTTGGTGGTGTCTCTGTGTGAATGAACACAGGAGCCTGAGCCACAGCTaGGACTGCAGTGTCCATCGT | + |
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Preference number: 2 (lower is better) Translates to: TVPWMTCCWWCLCVNEHRSLSHS*DCSVHR Trigger: ACGATGGACACTGCAGTCTCAGCTGTGGCTCAGGCT...CCTGTGTTCATTCACACAGAGACACCACCAACAGCAGGTCATCCATGGGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR-3UTR TCA 90 bp | GGCCTAGGAAAGACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCCATCGTCCTCAAGTCTaGGGAAAAGAGGCAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: GLGKTGFPLHTLHGSPSFHRPQV*GKEAGT Trigger: TGTGCCTGCCTCTTTTCCTCAGACTTGAGGACGATG...GAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTGGCCTAGGAAAGACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTCGATGTCCTGTCAGTTaGAGGATAGGCACTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: QAGLGKTGFPLHTLHGSPRCPVS*RIGTQR Trigger: TCTTTGAGTGCCTATCCTCCAACTGACAGGACATCG...AGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTTCGGATGTGTTGTGGATGTGTGTACTTCTGCCCACTGACATTGGAATGAGCCTGAGCCACAGCTaGGACTGCAGTGTCCATCGT | + |
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Preference number: 2 (lower is better) Translates to: QLSDVLWMCVLLPTDIGMSLSHS*DCSVHR Trigger: ACGATGGACACTGCAGTCTCAGCTGTGGCTCAGGCT...CATTCCAATGTCAGTGGGCAGAAGTACACACATCCACAACACATCCGAAAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR CAA 90 bp | AGCTTTCGGATGTGTTGTGGATGTGTGTACTTCTGCCCACTGACATaGGAATGGACGGCAACCAGTGGCTTCTTGATGTTGATCGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SFRMCCGCVYFCPLT*EWTATSGFLMLIEP Trigger: AGGCTCGATCAACATCAAGAAGCCACTGGTTGCCGTCCATTCCAATGTCAGTGGGCAGAAGTACACACATCCACAACACATCCGAAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCTTATACAAAGGACAGGAACATGGTTGGGTaGAGAGGCAGAGCAGCATTC | + |
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Preference number: 2 (lower is better) Translates to: QGSHSTPYTVLLVSYTKDRNMVG*RGRAAF Trigger: GAATGCTGCTCTGCCTCTGCACCCAACCATGTTCCT...GTCCTTTGTATAAGAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCTTATACAAAGGAACTCAATCTCCCACCTaGCAAGTGAGTGAAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: TGFPLHTLHGSPSFLYKGTQSPT*QVSEEQ Trigger: TTGTTCTTCACTCACTTGGCAGGTGGGAGATTGAGT...TCCTTTGTATAAGAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR GCA 72 bp | CAGAGGCAGAGCAGCATTCTGGCCGGGCAGGCCGTCTaGACAGGCGCCCTTTCCCCAGCAGCCCGATGTCCT | + |
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Preference number: 3 (lower is better) Translates to: QRQSSILAGQAV*TGALSPAARCP Trigger: AGGACATCGGGCTGCTGGGGAAAGGGCGCCTGTGCAGACGGCCTGCCCGGCCAGAATGCTGCTCTGCCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR TCA 72 bp | GGCTGTAGGACTTCCACGCCTGCCTGTTGCAGCACTTaGGGATGCTTCCCAGCTGCTGCCCGGGGCCCACCT | + |
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Preference number: 3 (lower is better) Translates to: GCRTSTPACCST*GCFPAAARGPP Trigger: AGGTGGGCCCCGGGCAGCAGCTGGGAAGCATCCTCAAGTGCTGCAACAGGCAGGCGTGGAAGTCCTACAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR GCA 72 bp | CTAGCCCTTCTGGGTTCACCGAGGAACATGGTTGGGTaGAGAGGCAGAGCAGCATTCTGGCCGGGCAGGCCG | + |
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Preference number: 3 (lower is better) Translates to: LALLGSPRNMVG*RGRAAFWPGRP Trigger: CGGCCTGCCCGGCCAGAATGCTGCTCTGCCTCTGCACCCAACCATGTTCCTCGGTGAACCCAGAAGGGCTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR GCA 72 bp | TGCTTCCCAGCTGCTGCCCGGGGCCCACCTCGTAGGTaGTGGGGAACTCCATGCCTTTCTTCCGCTCGTAGA | + |
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Preference number: 3 (lower is better) Translates to: CFPAAARGPPRR*WGTPCLSSARR Trigger: TCTACGAGCGGAAGAAAGGCATGGAGTTCCCCAGCACCTACGAGGTGGGCCCCGGGCAGCAGCTGGGAAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR CCA 72 bp | CAGGCTAGCCCTTCTGGGTTCACCGAGGAACATGGTTaGGTGCAGAGGCAGAGCAGCATTCTGGCCGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: QASPSGFTEEHG*VQRQSSILAGQ Trigger: CTGCCCGGCCAGAATGCTGCTCTGCCTCTGCACCCAACCATGTTCCTCGGTGAACCCAGAAGGGCTAGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR-3UTR CAA 90 bp | GGCCTAGGAAAGACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCGGCACCAGGCCTAGCTaGAAGCCAAGCAGTGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: GLGKTGFPLHTLHGSPSFGTRPS*KPSSVS Trigger: GGACACACTGCTTGGCTTCAAGCTAGGCCTGGTGCC...GAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR TCA 72 bp | AGGATAGGCACTCAAAGACTATGCTCTGAGGGAGCCTaGGCCACAGCTGAGACTGCAGTGTCCATCGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: RIGTQRLCSEGA*ATAETAVSIVL Trigger: GAGGACGATGGACACTGCAGTCTCAGCTGTGGCTCAGGCTCCCTCAGAGCATAGTCTTTGAGTGCCTATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230851.2 |
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| 3UTR GCA 72 bp | GAGGTCTGTATGGCACACGGGACTCAATCTCCCACCTaGCAAGTGAGTGAAGAACAAGGCCACCACACCTTG | + |
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Preference number: 3 (lower is better) Translates to: EVCMAHGTQSPT*QVSEEQGHHTL Trigger: CAAGGTGTGGTGGCCTTGTTCTTCACTCACTTGGCAGGTGGGAGATTGAGTCCCGTGTGCCATACAGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR TCA 72 bp | ATGGATGACCTGCTGTTGGTGGTGTCTCTGTGTGAATaGACACAGGCTGGCCTAGGAAAGACAGGGTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: MDDLLLVVSLCE*TQAGLGKTGFP Trigger: TGGGAACCCTGTCTTTCCTAGGCCAGCCTGTGTTCATTCACACAGAGACACCACCAACAGCAGGTCATCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR TCA 72 bp | AGCATTGCCCCACTCCTGCTGTGGAGCAGACTGCTCTaGGGAAGCCATAAACACAGTATGAGACACACTGTC | + |
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Preference number: 3 (lower is better) Translates to: SIAPLLLWSRLL*GSHKHSMRHTV Trigger: GACAGTGTGTCTCATACTGTGTTTATGGCTTCCTCAGAGCAGTCTGCTCCACAGCAGGAGTGGGGCAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR TCA 72 bp | CATTCTAAGCCCAAGGCCCTCAGGGGTCAGGATCCATaGTGTTCTGCATCACATCCACATGGCTGTAGGACT | + |
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Preference number: 3 (lower is better) Translates to: HSKPKALRGQDP*CSASHPHGCRT Trigger: AGTCCTACAGCCATGTGGATGTGATGCAGAACATCATGGATCCTGACCCCTGAGGGCCTTGGGCTTAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR GCA 72 bp | AGCAGCTTTCGGATGTGTTGTGGATGTGTGTACTTCTaGCCACTGACATTGGAATGGACGGCAACCAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SSFRMCCGCVYF*PLTLEWTATSG Trigger: GCCACTGGTTGCCGTCCATTCCAATGTCAGTGGGCAGAAGTACACACATCCACAACACATCCGAAAGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR GCA 72 bp | ATGGCTCATGTTTATTATATGTCTTCCCAGGAGCATTaGCCCACTCCTGCTGTGGAGCAGACTGCTCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: MAHVYYMSSQEH*PTPAVEQTALR Trigger: CCTCAGAGCAGTCTGCTCCACAGCAGGAGTGGGGCAATGCTCCTGGGAAGACATATAATAAACATGAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR GCA 72 bp | AAACACAGTATGAGACACACTGTCCCATGGATGACCTaGTGTTGGTGGTGTCTCTGTGTGAATGAACACAGG | + |
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Preference number: 3 (lower is better) Translates to: KHSMRHTVPWMT*CWWCLCVNEHR Trigger: CCTGTGTTCATTCACACAGAGACACCACCAACAGCAGGTCATCCATGGGACAGTGTGTCTCATACTGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR CCA 72 bp | GGAAGCCATAAACACAGTATGAGACACACTGTCCCATaGATGACCTGCTGTTGGTGGTGTCTCTGTGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: GSHKHSMRHTVP*MTCCWWCLCVN Trigger: ATTCACACAGAGACACCACCAACAGCAGGTCATCCATGGGACAGTGTGTCTCATACTGTGTTTATGGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCTTATACAAAGGACCAAGGCCACCACACCTaGATTCAAGATTCAAGACCA | + |
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Preference number: 3 (lower is better) Translates to: QGSHSTPYTVLLVSYTKDQGHHT*IQDSRP Trigger: TGGTCTTGAATCTTGAATCAAGGTGTGGTGGCCTTG...GTCCTTTGTATAAGAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR TCA 72 bp | ATTCTAGGACATACACAGGCACTTAATAAGTGCTTCTaGGGTCTGTATGGCACACGGGACTCAATCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: ILGHTQALNKCF*GLYGTRDSISH Trigger: GTGGGAGATTGAGTCCCGTGTGCCATACAGACCTCAGAAGCACTTATTAAGTGCCTGTGTATGTCCTAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR CCA 90 bp | GGGTGCAGAGGCAGAGCAGCATTCTGGCCGGGCAGGCCGTCTGCACAGGCGCCCCAGGGGATCCACGGCTaGCTCCATGAGGCAGGTATG | + |
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Preference number: 4 (lower is better) Translates to: GCRGRAAFWPGRPSAQAPQGIHG*LHEAGM Trigger: CATACCTGCCTCATGGAGCCAGCCGTGGATCCCCTG...GGGCGCCTGTGCAGACGGCCTGCCCGGCCAGAATGCTGCTCTGCCTCTGCACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAGAGCAGCATTCTGGCCGGGCAGGCCGTCTGCACAGGCGCCCTTTCCTTCCTCCGGAGAAACTaGAGGGCCTCAAGGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QRQSSILAGQAVCTGALSFLRRN*RASRCP Trigger: AGGACACCTTGAGGCCCTTCAGTTTCTCCGGAGGAA...GGAAAGGGCGCCTGTGCAGACGGCCTGCCCGGCCAGAATGCTGCTCTGCCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAGAGCAGCATTCTGGCCGGGCAGGCCGTCTGCACAGGCGCCCTTTCCGACTTGCAGTGCTCCTaGGCTTCCAAGCAGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QRQSSILAGQAVCTGALSDLQCS*ASKQAK Trigger: CTTTGCCTGCTTGGAAGCCCAGGAGCACTGCAAGTC...GGAAAGGGCGCCTGTGCAGACGGCCTGCCCGGCCAGAATGCTGCTCTGCCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAGAGCAGCATTCTGGCCGGGCAGGCCGTCTGCACAGGCGCCCTTTCCTTGGTGCGCCGGAAGTaGTACTTAGCAGAATTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QRQSSILAGQAVCTGALSLVRRK*YLAEFL Trigger: GAGGAATTCTGCTAAGTATCACTTCCGGCGCACCAA...GGAAAGGGCGCCTGTGCAGACGGCCTGCCCGGCCAGAATGCTGCTCTGCCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR GCA 90 bp | GGCCTAGGAAAGACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCAGGATGCTTCCCAGCTaGTGCCCGGGGCCCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: GLGKTGFPLHTLHGSPSFRMLPS*CPGPTS Trigger: CGAGGTGGGCCCCGGGCAGCAGCTGGGAAGCATCCT...GAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGCCTAGGAAAGACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTACTGGCGACACCACCTaGTGCCCTAGCAGCTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: QAGLGKTGFPLHTLHGSPTGDTT*CPSSFR Trigger: CCGAAAGCTGCTAGGGCAGCAGGTGGTGTCGCCAGT...AGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR CCA 90 bp | CTGCCCGGGGCCCACCTCGTAGGTGCTGGGGAACTCCATGCCTTTCTTCCGCTCCTTCAGAAAAATCCATaGCTCCAGCAAATACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LPGAHLVGAGELHAFLPLLQKNP*LQQIPR Trigger: CCTTGGTATTTGCTGGAGCCATGGATTTTTCTGAAG...GAGCGGAAGAAAGGCATGGAGTTCCCCAGCACCTACGAGGTGGGCCCCGGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR CAA 72 bp | AGGCAGCTGAGACGATCCTCTGGCACCAGGCCTAGCTaGAAGCCAAGCAGTGTGTCCACAATACCCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: RQLRRSSGTRPS*KPSSVSTIPTG Trigger: TCCTGTGGGTATTGTGGACACACTGCTTGGCTTCAAGCTAGGCCTGGTGCCAGAGGATCGTCTCAGCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR TCA 90 bp | CTGAGACTGCAGTGTCCATCGTCCTCAAGTCTGAGGAAAAGAGGCAGGCACAGACAAACTCTCCCACACTaGAGCCAGCCGCAGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: LRLQCPSSSSLRKRGRHRQTLPH*SQPQQH Trigger: GTGTTGCTGCGGCTGGCTTCAGTGTGGGAGAGTTTG...TCTGTGCCTGCCTCTTTTCCTCAGACTTGAGGACGATGGACACTGCAGTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230851.2 |
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| CDS-3UTR CCA 90 bp | CTTAGAATGGCTCATGTTTATTATATGTCTTCCCAGGAGCATTGCCCCACTCCTCGCACACGCGGGAGGTaGAGCAGGCCGCTGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: LRMAHVYYMSSQEHCPTPRTRGR*SRPLPM Trigger: CATGGGCAGCGGCCTGCTCCACCTCCCGCGTGTGCG...AGGAGTGGGGCAATGCTCCTGGGAAGACATATAATAAACATGAGCCATTCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR TCA 90 bp | ACTGTCCCATGGATGACCTGCTGTTGGTGGTGTCTCTGTGTGAATGAACACAGGCAAACTCTCCCACACTaGAGCCAGCCGCAGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: TVPWMTCCWWCLCVNEHRQTLPH*SQPQQH Trigger: GTGTTGCTGCGGCTGGCTTCAGTGTGGGAGAGTTTG...CCTGTGTTCATTCACACAGAGACACCACCAACAGCAGGTCATCCATGGGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR TCA 90 bp | CAGGCTGGCCTAGGAAAGACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGGGGTCAGGATCCATaGTGTTCTGCATCACATCCA | + |
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Preference number: 4 (lower is better) Translates to: QAGLGKTGFPLHTLHGSPRGQDP*CSASHP Trigger: TGGATGTGATGCAGAACATCATGGATCCTGACCCCT...AGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR GCA 90 bp | AGACACACTGTCCCATGGATGACCTGCTGTTGGTGGTGTCTCTGTGTGAATGAAGGCGACACCACCTGCTaGCCTAGCAGCTTTCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RHTVPWMTCCWWCLCVNEGDTTC*PSSFRM Trigger: CATCCGAAAGCTGCTAGGGCAGCAGGTGGTGTCGCC...TTCATTCACACAGAGACACCACCAACAGCAGGTCATCCATGGGACAGTGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR CCA 90 bp | AGCCAAGCAGTGTGTCCACAATACCCACAGGATGAGTCTAAGACTGCCCAGGCTCAGACAGCATCCCACTaGGAACGGCTTCGGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQAVCPQYPQDESKTAQAQTASH*ERLRML Trigger: AAGCATCCGAAGCCGTTCCCAGTGGGATGCTGTCTG...AGCCTGGGCAGTCTTAGACTCATCCTGTGGGTATTGTGGACACACTGCTTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR TCA 90 bp | CTGAGACTGCAGTGTCCATCGTCCTCAAGTCTGAGGAAAAGAGGCAGGCACAGACAAGGTGTCCTGAGATaGCCCTGCAGTCAGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LRLQCPSSSSLRKRGRHRQGVLR*PCSQER Trigger: TCTTTCCTGACTGCAGGGTCATCTCAGGACACCTTG...TCTGTGCCTGCCTCTTTTCCTCAGACTTGAGGACGATGGACACTGCAGTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR CCA 90 bp | AGCCAAGCAGTGTGTCCACAATACCCACAGGATGAGTCTAAGACTGCCCAGGCTCAGGAAAGAGGTAGTTaGACACCTGGCACACTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SQAVCPQYPQDESKTAQAQERGS*TPGTLG Trigger: ACCCAGTGTGCCAGGTGTCCAACTACCTCTTTCCTG...AGCCTGGGCAGTCTTAGACTCATCCTGTGGGTATTGTGGACACACTGCTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR GCA 90 bp | AGCCAAGCAGTGTGTCCACAATACCCACAGGATGAGTCTAAGACTGCCCAGGCTCTATACCCAAAGACTTaGAGTGCTCCTGGGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SQAVCPQYPQDESKTAQALYPKT*SAPGLP Trigger: TGGAAGCCCAGGAGCACTGCAAGTCTTTGGGTATAG...AGCCTGGGCAGTCTTAGACTCATCCTGTGGGTATTGTGGACACACTGCTTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR GCA 90 bp | AGCCAAGCAGTGTGTCCACAATACCCACAGGATGAGTCTAAGACTGCCCAGGCTGGATGTGTGTACTTCTaGCCACTGACATTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SQAVCPQYPQDESKTAQAGCVYF*PLTLEW Trigger: CCATTCCAATGTCAGTGGGCAGAAGTACACACATCC...AGCCTGGGCAGTCTTAGACTCATCCTGTGGGTATTGTGGACACACTGCTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR GCA 90 bp | GGCCTAGGAAAGACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCGGATCCATGATGTTCTaGATCACATCCACATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLGKTGFPLHTLHGSPSFGSMMF*ITSTWL Trigger: CAGCCATGTGGATGTGATGCAGAACATCATGGATCC...GAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR CCA 90 bp | ACTGTCCCATGGATGACCTGCTGTTGGTGGTGTCTCTGTGTGAATGAACACAGGGGACACCTGGCACACTaGGTTCTCTATACCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVPWMTCCWWCLCVNEHRGHLAH*VLYTQR Trigger: TCTTTGGGTATAGAGAACCCAGTGTGCCAGGTGTCC...CCTGTGTTCATTCACACAGAGACACCACCAACAGCAGGTCATCCATGGGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR CCA 90 bp | AGCCAAGCAGTGTGTCCACAATACCCACAGGATGAGTCTAAGACTGCCCAGGCTCTTTCGGATGTGTTGTaGATGTGTGTACTTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQAVCPQYPQDESKTAQALSDVL*MCVLLP Trigger: GGGCAGAAGTACACACATCCACAACACATCCGAAAG...AGCCTGGGCAGTCTTAGACTCATCCTGTGGGTATTGTGGACACACTGCTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR GCA 90 bp | ACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCTTATACAAAGGACCCAAAGACTTGCAGTaGTCCTGGGCTTCCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGFPLHTLHGSPSFLYKGPKDLQ*SWASKQ Trigger: CTGCTTGGAAGCCCAGGAGCACTGCAAGTCTTTGGG...TCCTTTGTATAAGAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR CAA 72 bp | AATGGCTCATGTTTATTATATGTCTTCCCAGGAGCATaGCCCCACTCCTGCTGTGGAGCAGACTGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NGSCLLYVFPGA*PHSCCGADCSE Trigger: CTCAGAGCAGTCTGCTCCACAGCAGGAGTGGGGCAATGCTCCTGGGAAGACATATAATAAACATGAGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR CAA 72 bp | ACATTGGAATGGACGGCAACCAGTGGCTTCTTGATGTaGATCGAGCCTAGAACTTTCATCAGGGGATCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TLEWTATSGFLM*IEPRTFIRGST Trigger: CGTGGATCCCCTGATGAAAGTTCTAGGCTCGATCAACATCAAGAAGCCACTGGTTGCCGTCCATTCCAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| 3UTR CAA 72 bp | CCACTGACATTGGAATGGACGGCAACCAGTGGCTTCTaGATGTTGATCGAGCCTAGAACTTTCATCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLTLEWTATSGF*MLIEPRTFIRG Trigger: TCCCCTGATGAAAGTTCTAGGCTCGATCAACATCAAGAAGCCACTGGTTGCCGTCCATTCCAATGTCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| CDS-3UTR TCA 90 bp | GATGTGTTGTGGATGTGTGTACTTCTGCCCACTGACATTGGAATGGACGGCAACTTCCTCCGGAGAAACTaGAGGGCCTTCAGAAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: DVLWMCVLLPTDIGMDGNFLRRN*RAFRKI Trigger: GATTTTTCTGAAGGCCCTTCAGTTTCTCCGGAGGAA...GTTGCCGTCCATTCCAATGTCAGTGGGCAGAAGTACACACATCCACAACACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| CDS-3UTR CCA 90 bp | GGCCTAGGAAAGACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCCTTCAGAAAAATCCATaGCTCCAGCAAATACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGKTGFPLHTLHGSPSFLQKNP*LQQIPR Trigger: CCTTGGTATTTGCTGGAGCCATGGATTTTTCTGAAG...GAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| 3UTR CAA 72 bp | ATGTGTTGTGGATGTGTGTACTTCTGCCCACTGACATaGGAATGGACGGCAACCAGTGGCTTCTTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MCCGCVYFCPLT*EWTATSGFLML Trigger: CAACATCAAGAAGCCACTGGTTGCCGTCCATTCCAATGTCAGTGGGCAGAAGTACACACATCCACAACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230851.2 |
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| CDS CCA 90 bp | AACACGGAGCACTGTGAAGGTGGCCGCCGCCGCGCCACCGCCTCCTaGGCTCCCTCCTCGGCCACGCTGGAGTCCCGCAGCAGCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: NTEHCEGGRRRATAS*APSSATLESRSSSA Trigger: GGCGGAGCTGCTGCGGGACTCCAGCGTGGCCGAGGAGGGAGCCCAGGAGGCGGTGGCGCGGCGGCGGCCACCTTCACAGTGCTCCGTGTT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS CCA 90 bp | GGGAGGTGGAGCAGGCCGCTGCCCATGCCGACCGCCTGGCAGCCCTaGCCGGGGAAGAGCAACACGGAGCACTGTGAAGGTGGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRWSRPLPMPTAWQP*PGKSNTEHCEGGRR Trigger: GCGGCGGCCACCTTCACAGTGCTCCGTGTTGCTCTTCCCCGGCCAGGGCTGCCAGGCGGTCGGCATGGGCAGCGGCCTGCTCCACCTCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS CCA 90 bp | CGCACACGCGGGAGGTGGAGCAGGCCGCTGCCCATGCCGACCGCCTaGCAGCCCTGGCCGGGGAAGAGCAACACGGAGCACTGTGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTRGRWSRPLPMPTA*QPWPGKSNTEHCEG Trigger: ACCTTCACAGTGCTCCGTGTTGCTCTTCCCCGGCCAGGGCTGCCAGGCGGTCGGCATGGGCAGCGGCCTGCTCCACCTCCCGCGTGTGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS GCA 90 bp | CGGCGGCCAGTGAAGCCACAAAGACGGCGGGCTGGCAATGCACTGTaGGGTCCAGGTCCTCCTGGGGCCCCCGCAGGCACAGCTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRPVKPQRRRAGNAL*GPGPPGAPAGTAPA Trigger: TGCTGGAGCTGTGCCTGCGGGGGCCCCAGGAGGACCTGGACCGCACAGTGCATTGCCAGCCCGCCGTCTTTGTGGCTTCACTGGCCGCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS GCA 90 bp | TTCTCCACGGCGGCCAGTGAAGCCACAAAGACGGCGGGCTGGCAATaGACTGTGCGGTCCAGGTCCTCCTGGGGCCCCCGCAGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSTAASEATKTAGWQ*TVRSRSSWGPRRHS Trigger: GCTGTGCCTGCGGGGGCCCCAGGAGGACCTGGACCGCACAGTGCATTGCCAGCCCGCCGTCTTTGTGGCTTCACTGGCCGCCGTGGAGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS CCA 90 bp | TGTAGCTTCTCCACGGCGGCCAGTGAAGCCACAAAGACGGCGGGCTaGCAATGCACTGTGCGGTCCAGGTCCTCCTGGGGCCCCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSFSTAASEATKTAG*QCTVRSRSSWGPRR Trigger: CCTGCGGGGGCCCCAGGAGGACCTGGACCGCACAGTGCATTGCCAGCCCGCCGTCTTTGTGGCTTCACTGGCCGCCGTGGAGAAGCTACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS-3UTR CAA 90 bp | GGGTGCAGAGGCAGAGCAGCATTCTGGCCGGGCAGGCCGTCTGCACAGGCGCCCTCTATACCCAAAGACTaGCAGTGCTCCTGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCRGRAAFWPGRPSAQAPSIPKD*QCSWAS Trigger: GGAAGCCCAGGAGCACTGCAAGTCTTTGGGTATAGA...GGGCGCCTGTGCAGACGGCCTGCCCGGCCAGAATGCTGCTCTGCCTCTGCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS GCA 90 bp | ACGCTGGCCAAGGACAGACAGCATCCCACTGGGAACGGCTTCGGATaGTTCTTGCATAGCTTCGGCACGGGCCTTCACCGCATACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TLAKDRQHPTGNGFG*FLHSFGTGLHRIQT Trigger: GGTCTGTATGCGGTGAAGGCCCGTGCCGAAGCTATGCAAGAAGCATCCGAAGCCGTTCCCAGTGGGATGCTGTCTGTCCTTGGCCAGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS TCA 90 bp | TTGCAGTGCTCCTGGGCTTCCAAGCAGGCAAAGGAGAAGTTGGACTaGCGCTGGCCAAGGACAGACAGCATCCCACTGGGAACGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LQCSWASKQAKEKLD*RWPRTDSIPLGTAS Trigger: CGAAGCCGTTCCCAGTGGGATGCTGTCTGTCCTTGGCCAGCGTCAGTCCAACTTCTCCTTTGCCTGCTTGGAAGCCCAGGAGCACTGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS-3UTR CAA 90 bp | GGTTCACCGAGGAACATGGTTGGGTGCAGAGGCAGAGCAGCATTCTGGCCGGGCTTCTGCCCACTGACATaGGAATGGACGGCAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSPRNMVGCRGRAAFWPGFCPLT*EWTATS Trigger: ACTGGTTGCCGTCCATTCCAATGTCAGTGGGCAGAA...GCCCGGCCAGAATGCTGCTCTGCCTCTGCACCCAACCATGTTCCTCGGTGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS CCA 90 bp | AAGACTTGCAGTGCTCCTGGGCTTCCAAGCAGGCAAAGGAGAAGTTaGACTGACGCTGGCCAAGGACAGACAGCATCCCACTGGGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: KTCSAPGLPSRQRRS*TDAGQGQTASHWER Trigger: CCGTTCCCAGTGGGATGCTGTCTGTCCTTGGCCAGCGTCAGTCCAACTTCTCCTTTGCCTGCTTGGAAGCCCAGGAGCACTGCAAGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS GCA 90 bp | CCAAGGACAGACAGCATCCCACTGGGAACGGCTTCGGATGCTTCTTaGATAGCTTCGGCACGGGCCTTCACCGCATACAGACCTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PRTDSIPLGTASDAS*IASARAFTAYRPSE Trigger: TTCTGAAGGTCTGTATGCGGTGAAGGCCCGTGCCGAAGCTATGCAAGAAGCATCCGAAGCCGTTCCCAGTGGGATGCTGTCTGTCCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS GCA 90 bp | GGTAGTTGGACACCTGGCACACTGGGTTCTCTATACCCAAAGACTTaGAGTGCTCCTGGGCTTCCAAGCAGGCAAAGGAGAAGTTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GSWTPGTLGSLYPKT*SAPGLPSRQRRSWT Trigger: AGTCCAACTTCTCCTTTGCCTGCTTGGAAGCCCAGGAGCACTGCAAGTCTTTGGGTATAGAGAACCCAGTGTGCCAGGTGTCCAACTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS-3UTR CAA 90 bp | CTTAGAATGGCTCATGTTTATTATATGTCTTCCCAGGAGCATTGCCCCACTCCTTGCCTGTTGCAGCACTaGAGGATGCTTCCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRMAHVYYMSSQEHCPTPCLLQH*RMLPSC Trigger: GCAGCTGGGAAGCATCCTCAAGTGCTGCAACAGGCA...AGGAGTGGGGCAATGCTCCTGGGAAGACATATAATAAACATGAGCCATTCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS-3UTR CAA 90 bp | ACAGGGTTCCCACTCCACACCTTACACGGTTCTCCTAGTTTCTTATACAAAGGATTCCACGCCTGCCTGTaGCAGCACTTGAGGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGFPLHTLHGSPSFLYKGFHACL*QHLRML Trigger: AAGCATCCTCAAGTGCTGCAACAGGCAGGCGTGGAA...TCCTTTGTATAAGAAACTAGGAGAACCGTGTAAGGTGTGGAGTGGGAACCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061882.10 |
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| CDS CCA 72 bp | CACTGTGAAGGTGGCCGCCGCCGCGCCACCGCCTCCTaGGCTCCCTCCTCGGCCACGCTGGAGTCCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HCEGGRRRATAS*APSSATLESRS Trigger: GCTGCGGGACTCCAGCGTGGCCGAGGAGGGAGCCCAGGAGGCGGTGGCGCGGCGGCGGCCACCTTCACAGTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS CCA 72 bp | GGGAGGTGGAGCAGGCCGCTGCCCATGCCGACCGCCTaGCAGCCCTGGCCGGGGAAGAGCAACACGGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GRWSRPLPMPTA*QPWPGKSNTEH Trigger: GTGCTCCGTGTTGCTCTTCCCCGGCCAGGGCTGCCAGGCGGTCGGCATGGGCAGCGGCCTGCTCCACCTCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS GCA 72 bp | GCGGCCAGTGAAGCCACAAAGACGGCGGGCTGGCAATaGACTGTGCGGTCCAGGTCCTCCTGGGGCCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AASEATKTAGWQ*TVRSRSSWGPR Trigger: GCGGGGGCCCCAGGAGGACCTGGACCGCACAGTGCATTGCCAGCCCGCCGTCTTTGTGGCTTCACTGGCCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS CCA 72 bp | AGCAGGCCGCTGCCCATGCCGACCGCCTGGCAGCCCTaGCCGGGGAAGAGCAACACGGAGCACTGTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRPLPMPTAWQP*PGKSNTEHCEG Trigger: ACCTTCACAGTGCTCCGTGTTGCTCTTCCCCGGCCAGGGCTGCCAGGCGGTCGGCATGGGCAGCGGCCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS CCA 72 bp | TCCACGGCGGCCAGTGAAGCCACAAAGACGGCGGGCTaGCAATGCACTGTGCGGTCCAGGTCCTCCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: STAASEATKTAG*QCTVRSRSSWG Trigger: GCCCCAGGAGGACCTGGACCGCACAGTGCATTGCCAGCCCGCCGTCTTTGTGGCTTCACTGGCCGCCGTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000230672.2 |
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| CDS GCA 72 bp | AAGGACAGACAGCATCCCACTGGGAACGGCTTCGGATaGTTCTTGCATAGCTTCGGCACGGGCCTTCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: KDRQHPTGNGFG*FLHSFGTGLHR Trigger: GCGGTGAAGGCCCGTGCCGAAGCTATGCAAGAAGCATCCGAAGCCGTTCCCAGTGGGATGCTGTCTGTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS CAA 90 bp | GCCAAGGACAGACAGCATCCCACTGGGAACGGCTTCGGATGCTTCTaGCATAGCTTCGGCACGGGCCTTCACCGCATACAGACCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AKDRQHPTGNGFGCF*HSFGTGLHRIQTFR Trigger: TCTGAAGGTCTGTATGCGGTGAAGGCCCGTGCCGAAGCTATGCAAGAAGCATCCGAAGCCGTTCCCAGTGGGATGCTGTCTGTCCTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS TCA 72 bp | TCCTGGGCTTCCAAGCAGGCAAAGGAGAAGTTGGACTaGCGCTGGCCAAGGACAGACAGCATCCCACTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SWASKQAKEKLD*RWPRTDSIPLG Trigger: TCCCAGTGGGATGCTGTCTGTCCTTGGCCAGCGTCAGTCCAACTTCTCCTTTGCCTGCTTGGAAGCCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS GCA 72 bp | GACAGCATCCCACTGGGAACGGCTTCGGATGCTTCTTaGATAGCTTCGGCACGGGCCTTCACCGCATACAGA | + |
|
Preference number: 6 (lower is better) Translates to: DSIPLGTASDAS*IASARAFTAYR Trigger: TCTGTATGCGGTGAAGGCCCGTGCCGAAGCTATGCAAGAAGCATCCGAAGCCGTTCCCAGTGGGATGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS CCA 72 bp | AGTGCTCCTGGGCTTCCAAGCAGGCAAAGGAGAAGTTaGACTGACGCTGGCCAAGGACAGACAGCATCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SAPGLPSRQRRS*TDAGQGQTASH Trigger: GTGGGATGCTGTCTGTCCTTGGCCAGCGTCAGTCCAACTTCTCCTTTGCCTGCTTGGAAGCCCAGGAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS CAA 72 bp | AGACAGCATCCCACTGGGAACGGCTTCGGATGCTTCTaGCATAGCTTCGGCACGGGCCTTCACCGCATACAG | + |
|
Preference number: 6 (lower is better) Translates to: RQHPTGNGFGCF*HSFGTGLHRIQ Trigger: CTGTATGCGGTGAAGGCCCGTGCCGAAGCTATGCAAGAAGCATCCGAAGCCGTTCCCAGTGGGATGCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS CAA 72 bp | GACACCTGGCACACTGGGTTCTCTATACCCAAAGACTaGCAGTGCTCCTGGGCTTCCAAGCAGGCAAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DTWHTGFSIPKD*QCSWASKQAKE Trigger: CTCCTTTGCCTGCTTGGAAGCCCAGGAGCACTGCAAGTCTTTGGGTATAGAGAACCCAGTGTGCCAGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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| CDS GCA 72 bp | TGGCACACTGGGTTCTCTATACCCAAAGACTTGCAGTaGTCCTGGGCTTCCAAGCAGGCAAAGGAGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WHTGFSIPKDLQ*SWASKQAKEKL Trigger: CAACTTCTCCTTTGCCTGCTTGGAAGCCCAGGAGCACTGCAAGTCTTTGGGTATAGAGAACCCAGTGTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061882.10 ENSMUST00000229724.2 |
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