Pregenerated sensors for MCAM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032135Ensembl transcript IDs: ENSMUST00000034650.15, ENSMUST00000098852.3, ENSMUST00000147836.2, ENSMUST00000149241.8, ENSMUST00000216002.2
Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGAGGCAAGCCCACACAGCTGATGGCAGAAGGATTTGCCACCAATaGCTGTGCACGGGAGGGGGAAATGCCCTGGGAGACGGGCCCCTT | + |
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Preference number: 1 (lower is better) Translates to: KRQAHTADGRRICHQ*LCTGGGNALGDGPL Trigger: AAGGGGCCCGTCTCCCAGGGCATTTCCCCCTCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTGCCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR TCA 90 bp | CGCTTGCTCTTACACAGGAACATTCGCTCATCATGGGGAGTGACGTaGCTCAGGGCCAGAGTAGCCACCGAGTCTTGGAGGCTAAGGCGG | + |
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Preference number: 1 (lower is better) Translates to: RLLLHRNIRSSWGVT*LRARVATESWRLRR Trigger: CCGCCTTAGCCTCCAAGACTCGGTGGCTACTCTGGCCCTGAGTCACGTCACTCCCCATGATGAGCGAATGTTCCTGTGTAAGAGCAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR GCA 90 bp | ATGAGCTCAAAGAGGCAAGCCCACACAGCTGATGGCAGAAGGATTTaGCACCAATGGCTGTGCACGGGAGGGGGAAATGCCCTGGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: MSSKRQAHTADGRRI*HQWLCTGGGNALGD Trigger: GTCTCCCAGGGCATTTCCCCCTCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTGCCTCTTTGAGCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR GCA 90 bp | TGGCAGAAGGATTTGCCACCAATGGCTGTGCACGGGAGGGGGAAATaGCCTGGGAGACGGGCCCCTTGGGATAAGCATTATTTACTGGAC | + |
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Preference number: 1 (lower is better) Translates to: WQKDLPPMAVHGRGK*PGRRAPWDKHYLLD Trigger: GTCCAGTAAATAATGCTTATCCCAAGGGGCCCGTCTCCCAGGGCATTTCCCCCTCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR TCA 90 bp | CATGTGCCCAGGTCCTGCATCATGAAGACAGCCTGTGAGGGGAGATaGGCTCAAAGAGGCAAGCCCACACAGCTGATGGCAGAAGGATTT | + |
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Preference number: 1 (lower is better) Translates to: HVPRSCIMKTACEGR*AQRGKPTQLMAEGF Trigger: AAATCCTTCTGCCATCAGCTGTGTGGGCTTGCCTCTTTGAGCTCATCTCCCCTCACAGGCTGTCTTCATGATGCAGGACCTGGGCACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR CCA 90 bp | TGGGGCTTTGAAGACCTGAAGCTCAACGTAGTGATCCTGGAGCCGTaGTCGCTTGCTCTTACACAGGAACATTCGCTCATCATGGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: WGFEDLKLNVVILEP*SLALTQEHSLIMGS Trigger: ACTCCCCATGATGAGCGAATGTTCCTGTGTAAGAGCAAGCGACCACGGCTCCAGGATCACTACGTTGAGCTTCAGGTCTTCAAAGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR TCA 90 bp | CAATGTGAACGGAATAATGTGACCATGTGCCCAGGTCCTGCATCATaGAGACAGCCTGTGAGGGGAGATGAGCTCAAAGAGGCAAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: QCERNNVTMCPGPAS*RQPVRGDELKEASP Trigger: TGGGCTTGCCTCTTTGAGCTCATCTCCCCTCACAGGCTGTCTTCATGATGCAGGACCTGGGCACATGGTCACATTATTCCGTTCACATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR CCA 90 bp | CTCTTGCCTGTCCACATGGATGCCCACGACATTGGCTTGAATAGTTaGTTCCTCTGGGGCTTTGAAGACCTGAAGCTCAACGTAGTGATC | + |
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Preference number: 1 (lower is better) Translates to: LLPVHMDAHDIGLNS*FLWGFEDLKLNVVI Trigger: GATCACTACGTTGAGCTTCAGGTCTTCAAAGCCCCAGAGGAACCAACTATTCAAGCCAATGTCGTGGGCATCCATGTGGACAGGCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR TCA 90 bp | AAGGTGTACAAGCCACTGGACTCGACAATCTGTGATGACTGGATATaGACTCGGTTCTCCTCCTCTTGCAAGGGCAGACTGTTCTTGTAC | + |
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Preference number: 1 (lower is better) Translates to: KVYKPLDSTICDDWI*TRFSSSCKGRLFLY Trigger: GTACAAGAACAGTCTGCCCTTGCAAGAGGAGGAGAACCGAGTTCATATCCAGTCATCACAGATTGTCGAGTCCAGTGGCTTGTACACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR CCA 90 bp | TTTCATCTCCTAAATACCATTCTCCCACTTGGGCTCTCTAGGACCTaGCCCCCAAAGCTCACATGTAGAAATTTGGTACTAACATTCCTA | + |
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Preference number: 1 (lower is better) Translates to: FHLLNTILPLGLSRT*PPKLTCRNLVLTFL Trigger: TAGGAATGTTAGTACCAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAGAATGGTATTTAGGAGATGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTGTGCACGGGAGGGGGAAATGCCCTGGGAGACGGGCCCCTTGGGATAAGTCCCTGCTGTCCCTCTaGAGGCTTCAGCTTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: MAVHGRGKCPGRRAPWDKSLLSL*RLQLGV Trigger: CACCCCAAGCTGAAGCCTCCAGAGGGACAGCAGGGA...CTTATCCCAAGGGGCCCGTCTCCCAGGGCATTTCCCCCTCCCGTGCACAGCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR GCA 90 bp | TACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGCACGGGAGGGGGAAATaGCCTGGGAGACGGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: YTGMCLEDLHQFLTTTQRHGRGK*PGRRAP Trigger: AGGGGCCCGTCTCCCAGGGCATTTCCCCCTCCCGTG...CCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR CAA 90 bp | GGGGTAGCCGTTTCTCCCCACACAGGTAGCAACCTCCCTGAGCTCTaGCCTGTCCACATGGATGCCCACGACATTGGCTTGAATAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: GVAVSPHTGSNLPEL*PVHMDAHDIGLNSW Trigger: CCAACTATTCAAGCCAATGTCGTGGGCATCCATGTGGACAGGCAAGAGCTCAGGGAGGTTGCTACCTGTGTGGGGAGAAACGGCTACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACCACGGGAGGGGGAAATaGCCTGGGAGACGGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LRECGKLGLSSLQRKQNNHGRGK*PGRRAP Trigger: AGGGGCCCGTCTCCCAGGGCATTTCCCCCTCCCGTG...GTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR TCA 90 bp | CACAAGGACCAATGTGAACGGAATAATGTGACCATGTGCCCAGGTCCTGCATCAGCCTCTGTAGCCAACTaGGCTCCTGCAGACGACTCC | + |
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Preference number: 2 (lower is better) Translates to: HKDQCERNNVTMCPGPASASVAN*APADDS Trigger: GGAGTCGTCTGCAGGAGCTCAGTTGGCTACAGAGGC...TGATGCAGGACCTGGGCACATGGTCACATTATTCCGTTCACATTGGTCCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR CCA 90 bp | CACAAGGACCAATGTGAACGGAATAATGTGACCATGTGCCCAGGTCCTGCATCATCCCTGCTGTCCCTCTaGAGGCTTCAGCTTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: HKDQCERNNVTMCPGPASSLLSL*RLQLGV Trigger: CACCCCAAGCTGAAGCCTCCAGAGGGACAGCAGGGA...TGATGCAGGACCTGGGCACATGGTCACATTATTCCGTTCACATTGGTCCTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR TCA 90 bp | CAACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGCCTCTGTAGCCAACTaGGCTCCTGCAGACGACTCC | + |
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Preference number: 2 (lower is better) Translates to: QQNSEKQCLASLHRDVSGASVAN*APADDS Trigger: GGAGTCGTCTGCAGGAGCTCAGTTGGCTACAGAGGC...TCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR TCA 90 bp | CACAAGGACCAATGTGAACGGAATAATGTGACCATGTGCCCAGGTCCTGCATCAGCAAGCCCACACAGCTaGTGGCAGAAGGATTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: HKDQCERNNVTMCPGPASASPHS*WQKDLP Trigger: TGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTGC...TGATGCAGGACCTGGGCACATGGTCACATTATTCCGTTCACATTGGTCCTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR TCA 90 bp | TACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGCATGAAGACAGCCTGTaGGGGGAGATGAGCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: YTGMCLEDLHQFLTTTQRHEDSL*GEMSSK Trigger: CTTTGAGCTCATCTCCCCTCACAGGCTGTCTTCATG...CCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR GCA 90 bp | CTAAGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACAGTGTGGCTCGTCCCTaGTGTCCCTCTGGAGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LRECGKLGLSSLQRKQNNSVARP*CPSGGF Trigger: GAAGCCTCCAGAGGGACAGCAGGGACGAGCCACACT...GTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACGATGGCAGAAGGATTTaGCACCAATGGCTGTGCACG | + |
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Preference number: 2 (lower is better) Translates to: QRNSAWLPYTGMCLEDLHDGRRI*HQWLCT Trigger: CGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATC...GTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR CCA 90 bp | CCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGGTAACACAGAGGAGGGCTTaGTCTCTAAAACCAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PLGLSRTWPPKLTCRNLVTQRRA*SLKPGL Trigger: GAGGCCTGGTTTTAGAGACCAAGCCCTCCTCTGTGT...TACCAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR CCA 90 bp | TACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGACACAGAGGAGGGCTTaGTCTCTAAAACCAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: YTGMCLEDLHQFLTTTQRTQRRA*SLKPGL Trigger: GAGGCCTGGTTTTAGAGACCAAGCCCTCCTCTGTGT...CCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACAAACCAGGTCCTGCATCATaGAGACAGCCTGTGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RECGKLGLSSLQRKQNNKPGPAS*RQPVRG Trigger: TCCCCTCACAGGCTGTCTTCATGATGCAGGACCTGG...TTTGTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGTTCCAAATGAGACCCTaGATTAGTAGCAGGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LPLGLSRTWPPKLTCRNLFQMRP*ISSRQE Trigger: TTCCTGCCTGCTACTAATTCAGGGTCTCATTTGGAA...CAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR GCA 90 bp | CAACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGATGGCAGAAGGATTTaGCACCAATGGCTGTGCACG | + |
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Preference number: 2 (lower is better) Translates to: QQNSEKQCLASLHRDVSGDGRRI*HQWLCT Trigger: CGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATC...TCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGTCTTCCTTAACTAGGCGTGCACTCAGAACACTCTTCAAGGTGTACAAGACCTCCCTGAGCTCTTaGCTGTCCACATGGATGCCC | + |
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Preference number: 2 (lower is better) Translates to: SLSSLTRRALRTLFKVYKTSLSS*LSTWMP Trigger: GGGCATCCATGTGGACAGGCAAGAGCTCAGGGAGGT...CTTGTACACCTTGAAGAGTGTTCTGAGTGCACGCCTAGTTAAGGAAGACAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR-3UTR TCA 90 bp | CACACACACACCTCAAAAGCTCTTGCTAGGCCAGGTTTTTCATCTCCTAAATACGCAAGCCCACACAGCTaGTGGCAGAAGGATTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: HTHTSKALARPGFSSPKYASPHS*WQKDLP Trigger: TGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTGC...GTATTTAGGAGATGAAAAACCTGGCCTAGCAAGAGCTTTTGAGGTGTGTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR TCA 90 bp | CCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGGTAACTTACACCAGTTCCTaGCCACTACCCAAAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: PLGLSRTWPPKLTCRNLVTYTSS*PLPKGK Trigger: TTTTCCTTTGGGTAGTGGTCAGGAACTGGTGTAAGT...TACCAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR GCA 90 bp | ACACTCTTCAAGGTGTACAAGCCACTGGACTCGACAATCTGTGATGACTGGATACGGTTCTCCTCCTCTTaGAAGGGCAGACTGTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: TLFKVYKPLDSTICDDWIRFSSS*KGRLFL Trigger: CAAGAACAGTCTGCCCTTGCAAGAGGAGGAGAACCG...TATCCAGTCATCACAGATTGTCGAGTCCAGTGGCTTGTACACCTTGAAGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGTCTTCCTTAACTAGGCGTGCACTCAGAACACTCTTCAAGGTGTACAAGTCTTGCCTGTCCACATaGATGCCCACGACATTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SLSSLTRRALRTLFKVYKSCLST*MPTTLA Trigger: AGCCAATGTCGTGGGCATCCATGTGGACAGGCAAGA...CTTGTACACCTTGAAGAGTGTTCTGAGTGCACGCCTAGTTAAGGAAGACAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTCTTCAAGGTGTACAAGCCACTGGACTCGACAATCTGTGATGACTGGATAATAGGACTTGAGGAATaGGGTAGCCGTTTCTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: TLFKVYKPLDSTICDDWIIGLEE*GSRFSP Trigger: TGGGGAGAAACGGCTACCCCATTCCTCAAGTCCTAT...TATCCAGTCATCACAGATTGTCGAGTCCAGTGGCTTGTACACCTTGAAGAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAGGACCAATGTGAACGGAATAATGTGACCATGTGCCCAGGTCCTGCATCAATAAGCATTATTTACTaGACACAGAGGAGGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: HKDQCERNNVTMCPGPASISIIY*TQRRAW Trigger: CCAAGCCCTCCTCTGTGTCCAGTAAATAATGCTTAT...TGATGCAGGACCTGGGCACATGGTCACATTATTCCGTTCACATTGGTCCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACAAATTCCAAATGAGACCCTaGATTAGTAGCAGGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RECGKLGLSSLQRKQNNKFQMRP*ISSRQE Trigger: TTCCTGCCTGCTACTAATTCAGGGTCTCATTTGGAA...TTTGTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR GCA 72 bp | ACAGCTGATGGCAGAAGGATTTGCCACCAATGGCTGTaGACGGGAGGGGGAAATGCCCTGGGAGACGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: TADGRRICHQWL*TGGGNALGDGP Trigger: GGGCCCGTCTCCCAGGGCATTTCCCCCTCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR TCA 72 bp | GCTGTCCCTCTGGAGGCTTCAGCTTGGGGTGAAGTCTaGGCAGGGAGCTGCGAGCAGTGCAATGGGAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: AVPLEASAWGEV*AGSCEQCNGSH Trigger: ATGGCTCCCATTGCACTGCTCGCAGCTCCCTGCTCAGACTTCACCCCAAGCTGAAGCCTCCAGAGGGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR GCA 72 bp | GATTTGCCACCAATGGCTGTGCACGGGAGGGGGAAATaGCCTGGGAGACGGGCCCCTTGGGATAAGCATTAT | + |
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Preference number: 3 (lower is better) Translates to: DLPPMAVHGRGK*PGRRAPWDKHY Trigger: ATAATGCTTATCCCAAGGGGCCCGTCTCCCAGGGCATTTCCCCCTCCCGTGCACAGCCATTGGTGGCAAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR GCA 72 bp | AAGAGGCAAGCCCACACAGCTGATGGCAGAAGGATTTaGCACCAATGGCTGTGCACGGGAGGGGGAAATGCC | + |
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Preference number: 3 (lower is better) Translates to: KRQAHTADGRRI*HQWLCTGGGNA Trigger: GGCATTTCCCCCTCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTGCCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR-3UTR CAA 90 bp | CAAGCCCACACAGCTGATGGCAGAAGGATTTGCCACCAATGGCTGTGCACGGGAGACACAGAGGAGGGCTaGGTCTCTAAAACCAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: QAHTADGRRICHQWLCTGDTEEG*VSKTRP Trigger: AGGCCTGGTTTTAGAGACCAAGCCCTCCTCTGTGTC...TCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR TCA 72 bp | CCATGTGCCCAGGTCCTGCATCATGAAGACAGCCTGTaGGGGGAGATGAGCTCAAAGAGGCAAGCCCACACA | + |
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Preference number: 3 (lower is better) Translates to: PCAQVLHHEDSL*GEMSSKRQAHT Trigger: TGTGTGGGCTTGCCTCTTTGAGCTCATCTCCCCTCACAGGCTGTCTTCATGATGCAGGACCTGGGCACATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR TCA 72 bp | AGGTCCTGCATCATGAAGACAGCCTGTGAGGGGAGATaGGCTCAAAGAGGCAAGCCCACACAGCTGATGGCA | + |
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Preference number: 3 (lower is better) Translates to: RSCIMKTACEGR*AQRGKPTQLMA Trigger: TGCCATCAGCTGTGTGGGCTTGCCTCTTTGAGCTCATCTCCCCTCACAGGCTGTCTTCATGATGCAGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR TCA 72 bp | TTACACAGGAACATTCGCTCATCATGGGGAGTGACGTaGCTCAGGGCCAGAGTAGCCACCGAGTCTTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LHRNIRSSWGVT*LRARVATESWR Trigger: CCTCCAAGACTCGGTGGCTACTCTGGCCCTGAGTCACGTCACTCCCCATGATGAGCGAATGTTCCTGTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR-3UTR CAA 90 bp | CCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGGTAGACACAGAGGAGGGCTaGGTCTCTAAAACCAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: PLGLSRTWPPKLTCRNLVDTEEG*VSKTRP Trigger: AGGCCTGGTTTTAGAGACCAAGCCCTCCTCTGTGTC...TACCAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR TCA 72 bp | CGGAATAATGTGACCATGTGCCCAGGTCCTGCATCATaGAGACAGCCTGTGAGGGGAGATGAGCTCAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: RNNVTMCPGPAS*RQPVRGDELKE Trigger: CTCTTTGAGCTCATCTCCCCTCACAGGCTGTCTTCATGATGCAGGACCTGGGCACATGGTCACATTATTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| 3UTR CCA 72 bp | GAAGACCTGAAGCTCAACGTAGTGATCCTGGAGCCGTaGTCGCTTGCTCTTACACAGGAACATTCGCTCATC | + |
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Preference number: 3 (lower is better) Translates to: EDLKLNVVILEP*SLALTQEHSLI Trigger: GATGAGCGAATGTTCCTGTGTAAGAGCAAGCGACCACGGCTCCAGGATCACTACGTTGAGCTTCAGGTCTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGATGACTGGATATGAACTCGGTTCTCCTCCTCTTGCAAGGGCAGACTGTGCCCACGACATTGGCTaGAATAGTTGGTTCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVMTGYELGSPPLARADCAHDIG*NSWFLW Trigger: CCAGAGGAACCAACTATTCAAGCCAATGTCGTGGGC...ACAGTCTGCCCTTGCAAGAGGAGGAGAACCGAGTTCATATCCAGTCATCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| 3UTR CCA 72 bp | GTCCACATGGATGCCCACGACATTGGCTTGAATAGTTaGTTCCTCTGGGGCTTTGAAGACCTGAAGCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VHMDAHDIGLNS*FLWGFEDLKLN Trigger: GTTGAGCTTCAGGTCTTCAAAGCCCCAGAGGAACCAACTATTCAAGCCAATGTCGTGGGCATCCATGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACACTCTTCAAGGTGTACAAGCCACTGGACTCGACAATCTGTGATGACTGGATCGGTTCTCCTCCTCTaGCAAGGGCAGACTGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: EHSSRCTSHWTRQSVMTGSVLLL*QGQTVL Trigger: AAGAACAGTCTGCCCTTGCAAGAGGAGGAGAACCGA...TCCAGTCATCACAGATTGTCGAGTCCAGTGGCTTGTACACCTTGAAGAGTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| 3UTR CCA 72 bp | GGGATAAGCATTATTTACTGGACACAGAGGAGGGCTTaGTCTCTAAAACCAGGCCTCTGTAGCCAACTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GISIIYWTQRRA*SLKPGLCSQLS Trigger: GCTCAGTTGGCTACAGAGGCCTGGTTTTAGAGACCAAGCCCTCCTCTGTGTCCAGTAAATAATGCTTATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| 3UTR CCA 72 bp | GATGCCCACGACATTGGCTTGAATAGTTGGTTCCTCTaGGGCTTTGAAGACCTGAAGCTCAACGTAGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: DAHDIGLNSWFL*GFEDLKLNVVI Trigger: GATCACTACGTTGAGCTTCAGGTCTTCAAAGCCCCAGAGGAACCAACTATTCAAGCCAATGTCGTGGGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACACCTCAAAAGCTCTTGCTAGGCCAGGTTTTTCATCTCCTAAATACATACCATTCTCCCACTaGGGCTCTCTAGGACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HTHTSKALARPGFSSPKYIPFSH*GSLGPG Trigger: GCCAGGTCCTAGAGAGCCCAAGTGGGAGAATGGTAT...GTATTTAGGAGATGAAAAACCTGGCCTAGCAAGAGCTTTTGAGGTGTGTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| 3UTR GCA 72 bp | ACCTTCTCTCTGTCCTGTCTCTTGTTACTAAGGGAATaGGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TFSLSCLLLLRE*GKLGLSSLQRK Trigger: TTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCTTAGTAACAAGAGACAGGACAGAGAGAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| 3UTR CCA 72 bp | CTAAATACCATTCTCCCACTTGGGCTCTCTAGGACCTaGCCCCCAAAGCTCACATGTAGAAATTTGGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: LNTILPLGLSRT*PPKLTCRNLVL Trigger: TAGTACCAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAGAATGGTATTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| 3UTR CCA 72 bp | GTGCACTCAGAACACTCTTCAAGGTGTACAAGCCACTaGACTCGACAATCTGTGATGACTGGATATGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: VHSEHSSRCTSH*TRQSVMTGYEL Trigger: GAGTTCATATCCAGTCATCACAGATTGTCGAGTCCAGTGGCTTGTACACCTTGAAGAGTGTTCTGAGTGCAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| 3UTR TCA 72 bp | CCACTACCCAAAGGAAAAATGTTCCAAATGAGACCCTaGATTAGTAGCAGGCAGGAAGGTACAAAAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLPKGKMFQMRP*ISSRQEGTKAA Trigger: GGCTGCTTTTGTACCTTCCTGCCTGCTACTAATTCAGGGTCTCATTTGGAACATTTTTCCTTTGGGTAGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| 3UTR TCA 72 bp | GTTCCTGACCACTACCCAAAGGAAAAATGTTCCAAATaGGACCCTGAATTAGTAGCAGGCAGGAAGGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: VPDHYPKEKCSK*DPELVAGRKVQ Trigger: TTGTACCTTCCTGCCTGCTACTAATTCAGGGTCTCATTTGGAACATTTTTCCTTTGGGTAGTGGTCAGGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | ATGGCTGTGCACGGGAGGGGGAAATGCCCTGGGAGACGGGCCCCTTGGGATAAGCCACCAGGTCGGGCGTaGGTACTGGCTGCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MAVHGRGKCPGRRAPWDKPPGRA*VLAAFP Trigger: AGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGG...CTTATCCCAAGGGGCCCGTCTCCCAGGGCATTTCCCCCTCCCGTGCACAGCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | ATGGCTGTGCACGGGAGGGGGAAATGCCCTGGGAGACGGGCCCCTTGGGATAAGTCACCAGGTTCCCGCTaGCCCTTGCCTTGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: MAVHGRGKCPGRRAPWDKSPGSR*PLPWCT Trigger: TGTGCACCAAGGCAAGGGCCAGCGGGAACCTGGTGA...CTTATCCCAAGGGGCCCGTCTCCCAGGGCATTTCCCCCTCCCGTGCACAGCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CAACTGAGCTCCTGCAGACGACTCCTGTCCCAGCTCCTAGCTCTCAGACCTGATCTGCTTTTCCTCTCCTaGCACACCCGCGGCACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QLSSCRRLLSQLLALRPDLLFLS*HTRGTA Trigger: CGCCGTGCCGCGGGTGTGCCAGGAGAGGAAAAGCAG...ATCAGGTCTGAGAGCTAGGAGCTGGGACAGGAGTCGTCTGCAGGAGCTCAGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | TCGTCCCTGCTGTCCCTCTGGAGGCTTCAGCTTGGGGTGAAGTCTGAGCAGGGAACCTCCCTGAGCTCTTaGCTGTCCACATGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSLWRLQLGVKSEQGTSLSS*LSTWMP Trigger: GGGCATCCATGTGGACAGGCAAGAGCTCAGGGAGGT...TCCCTGCTCAGACTTCACCCCAAGCTGAAGCCTCCAGAGGGACAGCAGGGACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CCGTGGTCGCTTGCTCTTACACAGGAACATTCGCTCATCATGGGGAGTGACGTGGTGAGGGGCCACACTTaGGAAGGGCTGTGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PWSLALTQEHSLIMGSDVVRGHT*EGLCCP Trigger: TGGGCAGCACAGCCCTTCTCAAGTGTGGCCCCTCAC...CACGTCACTCCCCATGATGAGCGAATGTTCCTGTGTAAGAGCAAGCGACCACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR TCA 90 bp | GATGCCCACGACATTGGCTTGAATAGTTGGTTCCTCTGGGGCTTTGAAGACCTGACCTCCAAACTGGCGTaGGGCCCAGGCGGAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DAHDIGLNSWFLWGFEDLTSKLA*GPGGGG Trigger: TCCCCCTCCGCCTGGGCCTCACGCCAGTTTGGAGGT...CAGGTCTTCAAAGCCCCAGAGGAACCAACTATTCAAGCCAATGTCGTGGGCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR CCA 90 bp | CAACTGAGCTCCTGCAGACGACTCCTGTCCCAGCTCCTAGCTCTCAGACCTGATCCACCAGGTCGGGCGTaGGTACTGGCTGCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLSSCRRLLSQLLALRPDPPGRA*VLAAFP Trigger: AGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGG...ATCAGGTCTGAGAGCTAGGAGCTGGGACAGGAGTCGTCTGCAGGAGCTCAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CTCCCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGGTGAGGGGCCACACTTaGGAAGGGCTGTGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLGLSRTWPPKLTCRNLVRGHT*EGLCCP Trigger: TGGGCAGCACAGCCCTTCTCAAGTGTGGCCCCTCAC...CAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | TCGTCCCTGCTGTCCCTCTGGAGGCTTCAGCTTGGGGTGAAGTCTGAGCAGGGAAACTCTGGGGACAGATaGCATGCAGAGATACCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSLWRLQLGVKSEQGNSGDR*HAEIPS Trigger: GGACGGTATCTCTGCATGGCATCTGTCCCCAGAGTT...TCCCTGCTCAGACTTCACCCCAAGCTGAAGCCTCCAGAGGGACAGCAGGGACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | GAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAGTCTGCTTTTCCTCTCCTaGCACACCCGCGGCACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ETVPGFLTQGCVWRTYTSLLFLS*HTRGTA Trigger: CGCCGTGCCGCGGGTGTGCCAGGAGAGGAAAAGCAG...ACTGGTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCTGATGGCAGAAGGATTTGCCACCAATGGCTGTGCACGGGAGGGGGAAATTCACCAGGTTCCCGCTaGCCCTTGCCTTGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TADGRRICHQWLCTGGGNSPGSR*PLPWCT Trigger: TGTGCACCAAGGCAAGGGCCAGCGGGAACCTGGTGA...ATTTCCCCCTCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGGTAGTGAGGGGCCACACTTaGGAAGGGCTGTGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGLSRTWPPKLTCRNLVVRGHT*EGLCCP Trigger: TGGGCAGCACAGCCCTTCTCAAGTGTGGCCCCTCAC...TACCAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGAACCTCGCAGGTCAGCGTaGGGCTCTCACCTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRDVSGGLTPVPDHYPKEPRRSA*GSHLPG Trigger: TCCAGGAAGGTGAGAGCCTCACGCTGACCTGCGAGG...TTCCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCCGTGGTCGCTTGCTCTTACACAGGAACATTCGCTCATCATGGGGAGTGTTCCCGCTGGCCCTTaGCTTGGTGCACACGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEPWSLALTQEHSLIMGSVPAGP*LGAHGK Trigger: TTTTCCGTGTGCACCAAGGCAAGGGCCAGCGGGAAC...ACTCCCCATGATGAGCGAATGTTCCTGTGTAAGAGCAAGCGACCACGGCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCTGTGCACGGGAGGGGGAAATGCCCTGGGAGACGGGCCCCTTGGGATAAGTGGGTTCCATTCAGTTaGCGAACCATTGACATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MAVHGRGKCPGRRAPWDKWVPFS*RTIDIP Trigger: TGGAATGTCAATGGTTCGGCAACTGAATGGAACCCA...CTTATCCCAAGGGGCCCGTCTCCCAGGGCATTTCCCCCTCCCGTGCACAGCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGGTCGGGCGTGGGTACTaGCTGCTTTTCCTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAWLPYTGMCLEDLHQFLVGRGY*LLFLSW Trigger: CCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGAC...CAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | TCGTCCCTGCTGTCCCTCTGGAGGCTTCAGCTTGGGGTGAAGTCTGAGCAGGGACACACCTTTGCTCTCTaGCTGTGGCAGCTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSLWRLQLGVKSEQGHTFAL*LWQLFL Trigger: GAGAAAAAGCTGCCACAGCCAGAGAGCAAAGGTGTG...TCCCTGCTCAGACTTCACCCCAAGCTGAAGCCTCCAGAGGGACAGCAGGGACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| 3UTR CAA 72 bp | GTTTCTCCCCACACAGGTAGCAACCTCCCTGAGCTCTaGCCTGTCCACATGGATGCCCACGACATTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSPHTGSNLPEL*PVHMDAHDIGL Trigger: CAAGCCAATGTCGTGGGCATCCATGTGGACAGGCAAGAGCTCAGGGAGGTTGCTACCTGTGTGGGGAGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCCGCCTCCAGACTGTGAGGTTCTCACAAGGACCAATGTGAACGGAATAACCAGTCCACTTGGCTaGAGTTGCCTGAGGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KQPPPDCEVLTRTNVNGITSPLG*SCLRPV Trigger: CACGGGCCTCAGGCAACTTCAGCCAAGTGGACTGGT...TATTCCGTTCACATTGGTCCTTGTGAGAACCTCACAGTCTGGAGGCGGCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAGTCCACTTGGCTaGAGTTGCCTGAGGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRETVPGFLTQGCVWRTYTSPLG*SCLRPV Trigger: CACGGGCCTCAGGCAACTTCAGCCAAGTGGACTGGT...GTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCACACAGCTGATGGCAGAAGGATTTGCCACCAATGGCTGTGCACGGGATCTTGTCACCGTTGCTaGCCTGAAGGAGAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QAHTADGRRICHQWLCTGSCHRC*PEGEPS Trigger: AGATGGCTCTCCTTCAGGGCAGCAACGGTGACAAGA...TCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034650.15 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGCCCTCTTGTCACCGTTaGTGCCCTGAAGGAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAWLPYTGMCLEDLHQFLPSCHR*CPEGEP Trigger: TGGCTCTCCTTCAGGGCAGCAACGGTGACAAGAGGG...CAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034650.15 |
||
| CDS-3UTR CCA 90 bp | GAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAGTGTCGGGCGTGGGTACTaGCTGCTTTTCCTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETVPGFLTQGCVWRTYTSVGRGY*LLFLSW Trigger: CCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGAC...ACTGGTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | GTGACTCAGGGCCAGAGTAGCCACCGAGTCTTGGAGGCTAAGGCGGTGCTCATAAAAAACCAGTCCACTTaGCTGAAGTTGCCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTQGQSSHRVLEAKAVLIKNQST*LKLPEA Trigger: GGCCTCAGGCAACTTCAGCCAAGTGGACTGGTTTTT...TATGAGCACCGCCTTAGCCTCCAAGACTCGGTGGCTACTCTGGCCCTGAGTCAC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTGATGGCAGAAGGATTTGCCACCAATGGCTGTGCACGGGAGGGGGAAATAGGCTCTCACCTTCCTaGACTTCAGGGGCAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TADGRRICHQWLCTGGGNRLSPS*TSGAVG Trigger: TCCAACTGCCCCTGAAGTCCAGGAAGGTGAGAGCCT...ATTTCCCCCTCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | TCGTCCCTGCTGTCCCTCTGGAGGCTTCAGCTTGGGGTGAAGTCTGAGCAGGGATTTGCTCTCTGGCTGTaGCAGCTTTTTCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSLWRLQLGVKSEQGFALWL*QLFLCG Trigger: TCCACAGAGAAAAAGCTGCCACAGCCAGAGAGCAAA...TCCCTGCTCAGACTTCACCCCAAGCTGAAGCCTCCAGAGGGACAGCAGGGACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | TGGGCATCTTTGTCTTCCTTAACTAGGCGTGCACTCAGAACACTCTTCAAGGTGGGCACACCTCCAAACTaGCGTGAGGCCCAGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WASLSSLTRRALRTLFKVGTPPN*REAQAE Trigger: CTCCGCCTGGGCCTCACGCCAGTTTGGAGGTGTGCC...CACCTTGAAGAGTGTTCTGAGTGCACGCCTAGTTAAGGAAGACAAAGATGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGTCACCGTTGCTGCCCTaGAGGAGAGCCATCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLPYTGMCLEDLHQFLSPLLP*RRAISS Trigger: AGAAGAGATGGCTCTCCTTCAGGGCAGCAACGGTGA...CAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034650.15 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACGTTCCCGCTGGCCCTTaGCTTGGTGCACACGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRETVPGFLTQGCVWRTYVPAGP*LGAHGK Trigger: TTTTCCGTGTGCACCAAGGCAAGGGCCAGCGGGAAC...GTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACGTTCCCGCTGGCCCTTaGCTTGGTGCACACGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASLHRDVSGGLTPVPDHYVPAGP*LGAHGK Trigger: TTTTCCGTGTGCACCAAGGCAAGGGCCAGCGGGAAC...GTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACACCTCCCTGAGCTCTTaGCTGTCCACATGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRNSAWLPYTGMCLEDLHTSLSS*LSTWMP Trigger: GGGCATCCATGTGGACAGGCAAGAGCTCAGGGAGGT...GTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | GGGGAGATGAGCTCAAAGAGGCAAGCCCACACAGCTGATGGCAGAAGGATTTGCCGGTTCTCCTCCTCTTaGAAGGGCAGACTGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GEMSSKRQAHTADGRRICRFSSS*KGRLFL Trigger: CAAGAACAGTCTGCCCTTGCAAGAGGAGGAGAACCG...GCAAATCCTTCTGCCATCAGCTGTGTGGGCTTGCCTCTTTGAGCTCATCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | AACCTCCCTGAGCTCTTGCCTGTCCACATGGATGCCCACGACATTGGCTTGAATCGCTGGCCCTTGCCTTaGTGCACACGGAAAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLPELLPVHMDAHDIGLNRWPLP*CTRKIS Trigger: ACTGATTTTCCGTGTGCACCAAGGCAAGGGCCAGCG...ATTCAAGCCAATGTCGTGGGCATCCATGTGGACAGGCAAGAGCTCAGGGAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGATGACTGGATATGAACTCGGTTCTCCTCCTCTTGCAAGGGCAGACTGTTCACCAGGTTCCCGCTaGCCCTTGCCTTGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVMTGYELGSPPLARADCSPGSR*PLPWCT Trigger: TGTGCACCAAGGCAAGGGCCAGCGGGAACCTGGTGA...ACAGTCTGCCCTTGCAAGAGGAGGAGAACCGAGTTCATATCCAGTCATCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGAGCTCAAAGAGGCAAGCCCACACAGCTGATGGCAGAAGGATTTGCCACCTGAGGCCAGTGGTTTaGCTGGAGTCAGGTATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EMSSKRQAHTADGRRICHLRPVV*LESGMR Trigger: CCTCATACCTGACTCCAGCCAAACCACTGGCCTCAG...GTGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTGCCTCTTTGAGCTCATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | TCAAAGAGGCAAGCCCACACAGCTGATGGCAGAAGGATTTGCCACCAATGGCTGTCCCGAGCGTCCACATaGCAGCTTGCCCTTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SKRQAHTADGRRICHQWLSRAST*QLALLV Trigger: TACAAGAAGGGCAAGCTGCCATGTGGACGCTCGGGA...CAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTGCCTCTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | AGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGGGGCTGAGGATGTCCTaGAGCCTCACAAGACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SAWLPYTGMCLEDLHQFLGLRMS*SLTRQI Trigger: AATCTGTCTTGTGAGGCTTCAGGACATCCTCAGCCC...CAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | CTCCCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGGCCCATTTTCATCGGTaGTCTCCTCTTCCATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLGLSRTWPPKLTCRNLAHFHR*SPLPSP Trigger: GGGAGATGGAAGAGGAGAGCACCGATGAAAATGGGC...CAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | GCACTCAGAACACTCTTCAAGGTGTACAAGCCACTGGACTCGACAATCTGTGATGTCGGGCGTGGGTACTaGCTGCTTTTCCTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRTLFKVYKPLDSTICDVGRGY*LLFLSW Trigger: CCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGAC...ATCACAGATTGTCGAGTCCAGTGGCTTGTACACCTTGAAGAGTGTTCTGAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR CCA 90 bp | AGAACACTCTTCAAGGTGTACAAGCCACTGGACTCGACAATCTGTGATGACTGGCCACCAGGTCGGGCGTaGGTACTGGCTGCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLFKVYKPLDSTICDDWPPGRA*VLAAFP Trigger: AGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGG...CCAGTCATCACAGATTGTCGAGTCCAGTGGCTTGTACACCTTGAAGAGTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR CCA 90 bp | TACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGCGCTGGCCCTTGCCTTaGTGCACACGGAAAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YTGMCLEDLHQFLTTTQRRWPLP*CTRKIS Trigger: ACTGATTTTCCGTGTGCACCAAGGCAAGGGCCAGCG...CCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CTCCCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGTCTTGCCTGTCCACATaGATGCCCACGACATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLGLSRTWPPKLTCRNLSCLST*MPTTLA Trigger: AGCCAATGTCGTGGGCATCCATGTGGACAGGCAAGA...CAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACAGGCTCTCACCTTCCTaGACTTCAGGGGCAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRETVPGFLTQGCVWRTYRLSPS*TSGAVG Trigger: TCCAACTGCCCCTGAAGTCCAGGAAGGTGAGAGCCT...GTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | GAGATGAGCTCAAAGAGGCAAGCCCACACAGCTGATGGCAGAAGGATTTGCCACGCTTCAGAACAATGGTaGTGGTGTTTGAGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EMSSKRQAHTADGRRICHASEQW*WCLSPG Trigger: CCCTGGGCTCAAACACCACCACCATTGTTCTGAAGC...GTGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTGCCTCTTTGAGCTCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCTGAGGCCAGTGGTTTaGCTGGAGTCAGGTATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRNSAWLPYTGMCLEDLHLRPVV*LESGMR Trigger: CCTCATACCTGACTCCAGCCAAACCACTGGCCTCAG...GTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | TTTCATCTCCTAAATACCATTCTCCCACTTGGGCTCTCTAGGACCTGGCCCCCATCCCGAGCGTCCACATaGCAGCTTGCCCTTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FHLLNTILPLGLSRTWPPSRAST*QLALLV Trigger: TACAAGAAGGGCAAGCTGCCATGTGGACGCTCGGGA...TGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAGAATGGTATTTAGGAGATGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | ACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGCTCTCCCTGGTCTCCTaGAGCCCTCTTGTCACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKLRETVPGFLTQGCVWRLSLVS*SPLVTV Trigger: AACGGTGACAAGAGGGCTCCAGGAGACCAGGGAGAG...CCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034650.15 |
||
| CDS-3UTR TCA 90 bp | CACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGAAGTTCCTCTGGGGCTTTaGAGACCTGAAGCTCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: HRDVSGGLTPVPDHYPKEVPLGL*RPEAQR Trigger: ACGTTGAGCTTCAGGTCTTCAAAGCCCCAGAGGAAC...TTCCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACTGGGTAGCCGGTAGCTaGGTTCACAGTAAAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRNSAWLPYTGMCLEDLHWVAGS*VHSKTG Trigger: CCCAGTTTTACTGTGAACTCAGCTACCGGCTACCCA...GTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | TTTCATCTCCTAAATACCATTCTCCCACTTGGGCTCTCTAGGACCTGGCCCCCACACCTGATTGTCACATaGTCCCCTTCCTTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHLLNTILPLGLSRTWPPHLIVT*SPSFSS Trigger: GCTGCTGAAGGAAGGGGATCATGTGACAATCAGGTG...TGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAGAATGGTATTTAGGAGATGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | TACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGCTCCAGGGGGTCACTTaGCAGTGTGATGGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YTGMCLEDLHQFLTTTQRLQGVT*QCDGSF Trigger: GAAACTACCATCACACTGTCAAGTGACCCCCTGGAG...CCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CACACACACACCTCAAAAGCTCTTGCTAGGCCAGGTTTTTCATCTCCTAAATACCCTCGCAGGTCAGCGTaGGGCTCTCACCTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTSKALARPGFSSPKYPRRSA*GSHLPG Trigger: TCCAGGAAGGTGAGAGCCTCACGCTGACCTGCGAGG...GTATTTAGGAGATGAAAAACCTGGCCTAGCAAGAGCTTTTGAGGTGTGTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | TTTCATCTCCTAAATACCATTCTCCCACTTGGGCTCTCTAGGACCTGGCCCCCACGGTTCTCCTCCTCTTaGAAGGGCAGACTGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FHLLNTILPLGLSRTWPPRFSSS*KGRLFL Trigger: CAAGAACAGTCTGCCCTTGCAAGAGGAGGAGAACCG...TGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAGAATGGTATTTAGGAGATGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCTGATGGCAGAAGGATTTGCCACCAATGGCTGTGCACGGGAGGGGGAAATCACCCACACTTTTTCTaGAGGGTAGAAAACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TADGRRICHQWLCTGGGNHPHFF*RVENRD Trigger: GTCCCTGTTTTCTACCCTGCAGAAAAAGTGTGGGTG...ATTTCCCCCTCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACAACTCTGGGGACAGATaGCATGCAGAGATACCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRETVPGFLTQGCVWRTYNSGDR*HAEIPS Trigger: GGACGGTATCTCTGCATGGCATCTGTCCCCAGAGTT...GTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | GGGGAGATGAGCTCAAAGAGGCAAGCCCACACAGCTGATGGCAGAAGGATTTGCAGACAGATTCAGCACTaGATTCTCTTGCACCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GEMSSKRQAHTADGRRICRQIQH*ILLHPH Trigger: GTGTGGGTGCAAGAGAATGCAGTGCTGAATCTGTCT...GCAAATCCTTCTGCCATCAGCTGTGTGGGCTTGCCTCTTTGAGCTCATCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGTTAGATTCCTTCATGTaGTTCCCACTGGGTAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SAWLPYTGMCLEDLHQFLLDSFM*FPLGSR Trigger: CCGGCTACCCAGTGGGAACCACATGAAGGAATCTAA...CAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | TACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGGCAGCTTTTTCTCTGTaGAGGTGCTGTTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTGMCLEDLHQFLTTTQRAAFSL*RCCWLW Trigger: CCAGAGCCAACAGCACCTCCACAGAGAAAAAGCTGC...CCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CACAAGGACCAATGTGAACGGAATAATGTGACCATGTGCCCAGGTCCTGCATCACTCCAGGGGGTCACTTaGCAGTGTGATGGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKDQCERNNVTMCPGPASLQGVT*QCDGSF Trigger: GAAACTACCATCACACTGTCAAGTGACCCCCTGGAG...TGATGCAGGACCTGGGCACATGGTCACATTATTCCGTTCACATTGGTCCTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | TCGTCCCTGCTGTCCCTCTGGAGGCTTCAGCTTGGGGTGAAGTCTGAGCAGGGATTCTGGGAGCTTATCTaGCTTAACTTCAACTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSLWRLQLGVKSEQGFWELI*LNFNYK Trigger: TTTGTAGTTGAAGTTAAGTCAGATAAGCTCCCAGAA...TCCCTGCTCAGACTTCACCCCAAGCTGAAGCCTCCAGAGGGACAGCAGGGACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034650.15 |
||
| CDS-3UTR GCA 90 bp | CACAAGGACCAATGTGAACGGAATAATGTGACCATGTGCCCAGGTCCTGCATCAGCCCATTTTCATCGGTaGTCTCCTCTTCCATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HKDQCERNNVTMCPGPASAHFHR*SPLPSP Trigger: GGGAGATGGAAGAGGAGAGCACCGATGAAAATGGGC...TGATGCAGGACCTGGGCACATGGTCACATTATTCCGTTCACATTGGTCCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | TACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGTTTTCTCTGTGGAGGTaGTGTTGGCTCTGGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTGMCLEDLHQFLTTTQRFSLWR*CWLWCE Trigger: CTCACACCAGAGCCAACAGCACCTCCACAGAGAAAA...CCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | TACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGAAAAACCAGTCCACTTaGCTGAAGTTGCCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YTGMCLEDLHQFLTTTQRKNQST*LKLPEA Trigger: GGCCTCAGGCAACTTCAGCCAAGTGGACTGGTTTTT...CCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACATAGGACTTGAGGAATaGGGTAGCCGTTTCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRNSAWLPYTGMCLEDLHIGLEE*GSRFSP Trigger: TGGGGAGAAACGGCTACCCCATTCCTCAAGTCCTAT...GTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCGCCTCCAGACTGTGAGGTTCTCACAAGGACCAATGTGAACGGAATACCAGCTTCAGAACAATaGTGGTGGTGTTTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQPPPDCEVLTRTNVNGIPASEQ*WWCLSP Trigger: TGGGCTCAAACACCACCACCATTGTTCTGAAGCTGG...TATTCCGTTCACATTGGTCCTTGTGAGAACCTCACAGTCTGGAGGCGGCTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGAACCAGCTTCAGAACAATaGTGGTGGTGTTTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRDVSGGLTPVPDHYPKEPASEQ*WWCLSP Trigger: TGGGCTCAAACACCACCACCATTGTTCTGAAGCTGG...TTCCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CTCCCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGTTTGCTCTCTGGCTGTaGCAGCTTTTTCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLGLSRTWPPKLTCRNLFALWL*QLFLCG Trigger: TCCACAGAGAAAAAGCTGCCACAGCCAGAGAGCAAA...CAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCGCCTCCAGACTGTGAGGTTCTCACAAGGACCAATGTGAACGGAATAATGTATTTCTCTCCCTaGTCTCCTGGAGCCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQPPPDCEVLTRTNVNGIMYFSP*SPGALL Trigger: CAAGAGGGCTCCAGGAGACCAGGGAGAGAAATACAT...TATTCCGTTCACATTGGTCCTTGTGAGAACCTCACAGTCTGGAGGCGGCTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034650.15 |
||
| CDS-3UTR CCA 90 bp | TGGGCATCTTTGTCTTCCTTAACTAGGCGTGCACTCAGAACACTCTTCAAGGTGCTGCTTTTCCTCTCCTaGCACACCTCCAAACTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WASLSSLTRRALRTLFKVLLFLS*HTSKLA Trigger: CGCCAGTTTGGAGGTGTGCCAGGAGAGGAAAAGCAG...CACCTTGAAGAGTGTTCTGAGTGCACGCCTAGTTAAGGAAGACAAAGATGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS-3UTR TCA 90 bp | CAACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGTTCCTCTGGGGCTTTaGAGACCTGAAGCTCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: QQNSEKQCLASLHRDVSGVPLGL*RPEAQR Trigger: ACGTTGAGCTTCAGGTCTTCAAAGCCCCAGAGGAAC...TCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACCATCTGTCAGACACCTaGTTGTCACATGATCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRETVPGFLTQGCVWRTYHLSDT*LSHDPL Trigger: AAGGGGATCATGTGACAATCAGGTGTCTGACAGATG...GTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCATCTGTCAGACACCTaGTTGTCACATGATCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRNSAWLPYTGMCLEDLHHLSDT*LSHDPL Trigger: AAGGGGATCATGTGACAATCAGGTGTCTGACAGATG...GTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | AACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTATAGTGAAGTGGGGTTaGGGGTTGCCATCTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSEKQCLASLHRDVSGGLIVKWG*GLPSVR Trigger: TCTGACAGATGGCAACCCTCAACCCCACTTCACTAT...AAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR TCA 90 bp | CAACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGGCTGAGGATGTCCTaGAGCCTCACAAGACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: QQNSEKQCLASLHRDVSGGLRMS*SLTRQI Trigger: AATCTGTCTTGTGAGGCTTCAGGACATCCTCAGCCC...TCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CACACACACACCTCAAAAGCTCTTGCTAGGCCAGGTTTTTCATCTCCTAAATACCCCTTTCCCAGCAGCTaGCCTGTCTTGTCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTSKALARPGFSSPKYPFPSS*PVLSLS Trigger: GCTGAGAGACAAGACAGGCCAGCTGCTGGGAAAGGG...GTATTTAGGAGATGAAAAACCTGGCCTAGCAAGAGCTTTTGAGGTGTGTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | AGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACAAACCCTTTCCCAGCAGCTaGCCTGTCTTGTCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RECGKLGLSSLQRKQNNKPFPSS*PVLSLS Trigger: GCTGAGAGACAAGACAGGCCAGCTGCTGGGAAAGGG...TTTGTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CAACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGCAGCTTTTTCTCTGTaGAGGTGCTGTTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQNSEKQCLASLHRDVSGAAFSL*RCCWLW Trigger: CCAGAGCCAACAGCACCTCCACAGAGAAAAAGCTGC...TCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | ACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGCACACCTTTGCTCTCTaGCTGTGGCAGCTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKLRETVPGFLTQGCVWRHTFAL*LWQLFL Trigger: GAGAAAAAGCTGCCACAGCCAGAGAGCAAAGGTGTG...CCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | CAACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGATTTTCTCTGTGGAGGTaGTGTTGGCTCTGGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQNSEKQCLASLHRDVSGFSLWR*CWLWCE Trigger: CTCACACCAGAGCCAACAGCACCTCCACAGAGAAAA...TCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR GCA 90 bp | AAGCAGCCGCCTCCAGACTGTGAGGTTCTCACAAGGACCAATGTGAACGGAATAGTCCACATGGCAGCTTaGCCTTCTTGTAGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KQPPPDCEVLTRTNVNGIVHMAA*PSCRRN Trigger: ATTTCTTCTACAAGAAGGGCAAGCTGCCATGTGGAC...TATTCCGTTCACATTGGTCCTTGTGAGAACCTCACAGTCTGGAGGCGGCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR CCA 90 bp | AGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACAAACGCTGGCCCTTGCCTTaGTGCACACGGAAAATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RECGKLGLSSLQRKQNNKRWPLP*CTRKIS Trigger: ACTGATTTTCCGTGTGCACCAAGGCAAGGGCCAGCG...TTTGTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR CCA 90 bp | CTCCCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGATTGGCTTGAATAGTTaGTTCCTCTGGGGCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLGLSRTWPPKLTCRNLIGLNS*FLWGFE Trigger: TTCAAAGCCCCAGAGGAACCAACTATTCAAGCCAAT...CAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR TCA 90 bp | CACACACACACCTCAAAAGCTCTTGCTAGGCCAGGTTTTTCATCTCCTAAATACCACCTGATTGTCACATaGTCCCCTTCCTTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTSKALARPGFSSPKYHLIVT*SPSFSS Trigger: GCTGCTGAAGGAAGGGGATCATGTGACAATCAGGTG...GTATTTAGGAGATGAAAAACCTGGCCTAGCAAGAGCTTTTGAGGTGTGTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR TCA 90 bp | CTAAGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACATAGTGAAGTGGGGTTaGGGGTTGCCATCTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRECGKLGLSSLQRKQNNIVKWG*GLPSVR Trigger: TCTGACAGATGGCAACCCTCAACCCCACTTCACTAT...GTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR GCA 90 bp | ACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGTGGGTTCCATTCAGTTaGCGAACCATTGACATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKLRETVPGFLTQGCVWRWVPFS*RTIDIP Trigger: TGGAATGTCAATGGTTCGGCAACTGAATGGAACCCA...CCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | AACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTGTCCACATGGCAGCTTaGCCTTCTTGTAGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSEKQCLASLHRDVSGGLVHMAA*PSCRRN Trigger: ATTTCTTCTACAAGAAGGGCAAGCTGCCATGTGGAC...AAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCGCCTCCAGACTGTGAGGTTCTCACAAGGACCAATGTGAACGGAATAATTGGCTTGAATAGTTaGTTCCTCTGGGGCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQPPPDCEVLTRTNVNGIIGLNS*FLWGFE Trigger: TTCAAAGCCCCAGAGGAACCAACTATTCAAGCCAAT...TATTCCGTTCACATTGGTCCTTGTGAGAACCTCACAGTCTGGAGGCGGCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | AGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACAAATCTTGCCTGTCCACATaGATGCCCACGACATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RECGKLGLSSLQRKQNNKSCLST*MPTTLA Trigger: AGCCAATGTCGTGGGCATCCATGTGGACAGGCAAGA...TTTGTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CTAAGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACATAGGACTTGAGGAATaGGGTAGCCGTTTCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRECGKLGLSSLQRKQNNIGLEE*GSRFSP Trigger: TGGGGAGAAACGGCTACCCCATTCCTCAAGTCCTAT...GTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CCA 90 bp | CTAAGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACTTAGATTCCTTCATGTaGTTCCCACTGGGTAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRECGKLGLSSLQRKQNNLDSFM*FPLGSR Trigger: CCGGCTACCCAGTGGGAACCACATGAAGGAATCTAA...GTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR CCA 90 bp | AGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACAAAAAAAACCAGTCCACTTaGCTGAAGTTGCCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RECGKLGLSSLQRKQNNKKNQST*LKLPEA Trigger: GGCCTCAGGCAACTTCAGCCAAGTGGACTGGTTTTT...TTTGTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCT 47% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR GCA 90 bp | AGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACAAACACCCACACTTTTTCTaGAGGGTAGAAAACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RECGKLGLSSLQRKQNNKHPHFF*RVENRD Trigger: GTCCCTGTTTTCTACCCTGCAGAAAAAGTGTGGGTG...TTTGTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR GCA 90 bp | CACACACACACCTCAAAAGCTCTTGCTAGGCCAGGTTTTTCATCTCCTAAATACAGACAGATTCAGCACTaGATTCTCTTGCACCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTSKALARPGFSSPKYRQIQH*ILLHPH Trigger: GTGTGGGTGCAAGAGAATGCAGTGCTGAATCTGTCT...GTATTTAGGAGATGAAAAACCTGGCCTAGCAAGAGCTTTTGAGGTGTGTGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS CCA 90 bp | GGAAACTGCCTTTTCCAGCAACAGGCGGGCGCGGGATGCACGGGTTaGGGATGCGCCCCGGCTGCGCCTCTCTGCCGGGACTCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GNCLFQQQAGAGCTG*GCAPAAPLCRDSST Trigger: GGTGCTGGAGTCCCGGCAGAGAGGCGCAGCCGGGGCGCATCCCCAACCCGTGCATCCCGCGCCCGCCTGTTGCTGGAAAAGGCAGTTTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| CDS CCA 90 bp | GGCTGTGCTGCCCACTTCTGCCTCCACCAGGTCGGGCGTGGGTACTaGCTGCTTTTCCTCTCCCGCGGCACGGCGACAGCAGCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCAAHFCLHQVGRGY*LLFLSRGTATAAAG Trigger: GCCTGCTGCTGCTGTCGCCGTGCCGCGGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGTGGGCAGCACAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216002.2 |
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| CDS CCA 90 bp | GGCTGTGCTGCCCACTTCTGCCTCCACCAGGTCGGGCGTGGGTACTaGCTGCTTTTCCTCTCCTGGCACACCCGCGGCACGGCGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCAAHFCLHQVGRGY*LLFLSWHTRGTATA Trigger: TGCTGTCGCCGTGCCGCGGGTGTGCCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGTGGGCAGCACAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CCA 90 bp | TGCCTCCACCAGGTCGGGCGTGGGTACTGGCTGCTTTTCCTCTCCTaGCACACCCGCGGCACGGCGACAGCAGCAGCAGGCAGCGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: CLHQVGRGYWLLFLS*HTRGTATAAAGSEQ Trigger: TTGTTCGCTGCCTGCTGCTGCTGTCGCCGTGCCGCGGGTGTGCCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | ATGGGGAGTGACGTGACTCAGGGCCAGAGTAGCCACCGAGTCTTGGAGGCTAAGCGTGAGGGGCCACACTaGAGAAGGGCTGTGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MGSDVTQGQSSHRVLEAKREGPH*RRAVLP Trigger: GGGCAGCACAGCCCTTCTCAAGTGTGGCCCCTCACG...CTTAGCCTCCAAGACTCGGTGGCTACTCTGGCCCTGAGTCACGTCACTCCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| CDS TCA 90 bp | GGTCCACACGACCACAGGAACATTCGCTCATCATGGGGAGTGACGTaGCTCAGGGCCAGAGTAGCCACCGAGTCTTGGAGGCTAAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPHDHRNIRSSWGVT*LRARVATESWRLRR Trigger: CCGCCTTAGCCTCCAAGACTCGGTGGCTACTCTGGCCCTGAGTCACGTCACTCCCCATGATGAGCGAATGTTCCTGTGGTCGTGTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147836.2 |
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| CDS-3UTR CAA 90 bp | CAAGCCCACACAGCTGATGGCAGAAGGATTTGCCACCAATGGCTGTGCACGGGATCCACTTGGCTGAAGTaGCCTGAGGCCCGTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QAHTADGRRICHQWLCTGSTWLK*PEAREG Trigger: CCCCTCACGGGCCTCAGGCAACTTCAGCCAAGTGGA...TCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS TCA 90 bp | GGCTGTGGCAGCTTTTTCTCTGTGGAGGTGCTGTTGGCTCTGGTGTaGGGACTGACTGTGAGGGTGCTGAGGCCAGTGGTTTGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCGSFFSVEVLLALV*GLTVRVLRPVVWLE Trigger: CTCCAGCCAAACCACTGGCCTCAGCACCCTCACAGTCAGTCCTCACACCAGAGCCAACAGCACCTCCACAGAGAAAAAGCTGCCACAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CCA 90 bp | ATGCAGAGATACCGTCCCCCTGCTTCCCGTCTCACGTTGTTTAGCTaGAGGACGGGACCCTTTCCCAGCAGCTGGCCTGTCTTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MQRYRPPASRLTLFS*RTGPFPSSWPVLSL Trigger: GAGAGACAAGACAGGCCAGCTGCTGGGAAAGGGTCCCGTCCTCCAGCTAAACAACGTGAGACGGGAAGCAGGGGGACGGTATCTCTGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS GCA 90 bp | GCTGACCAGCTGGGTACGATTCAAGCCAGGAACTCTGGGGACAGATaGCATGCAGAGATACCGTCCCCCTGCTTCCCGTCTCACGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ADQLGTIQARNSGDR*HAEIPSPCFPSHVV Trigger: AACAACGTGAGACGGGAAGCAGGGGGACGGTATCTCTGCATGGCATCTGTCCCCAGAGTTCCTGGCTTGAATCGTACCCAGCTGGTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR CAA 90 bp | CTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACCGTGAGGGGCCACACTaGAGAAGGGCTGTGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRETVPGFLTQGCVWRTYREGPH*RRAVLP Trigger: GGGCAGCACAGCCCTTCTCAAGTGTGGCCCCTCACG...GTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS GCA 90 bp | CCAGCTGGGTACGATTCAAGCCAGGAACTCTGGGGACAGATGCCATaGAGAGATACCGTCCCCCTGCTTCCCGTCTCACGTTGTTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAGYDSSQELWGQMP*RDTVPLLPVSRCLA Trigger: AGCTAAACAACGTGAGACGGGAAGCAGGGGGACGGTATCTCTGCATGGCATCTGTCCCCAGAGTTCCTGGCTTGAATCGTACCCAGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CCA 90 bp | AGCAGCTGGCCTGTCTTGTCTCTCAGCCACTCAAACTCAAGGTCCTaGTTACTTTCTGCCTCGCAGGTCAGCGTGAGGCTCTCACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSWPVLSLSHSNSRS*LLSASQVSVRLSPS Trigger: GGAAGGTGAGAGCCTCACGCTGACCTGCGAGGCAGAAAGTAACCAGGACCTTGAGTTTGAGTGGCTGAGAGACAAGACAGGCCAGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR CAA 90 bp | CAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACTCCACTTGGCTGAAGTaGCCTGAGGCCCGTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QRNSAWLPYTGMCLEDLHSTWLK*PEAREG Trigger: CCCCTCACGGGCCTCAGGCAACTTCAGCCAAGTGGA...GTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR CAA 90 bp | ACAGCTGATGGCAGAAGGATTTGCCACCAATGGCTGTGCACGGGAGGGGGAAATCAATGGTGGTGGTGTTaGAGCCCAGGGAGTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TADGRRICHQWLCTGGGNQWWWC*SPGSWR Trigger: CCTCCAACTCCCTGGGCTCAAACACCACCACCATTG...ATTTCCCCCTCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR CAA 90 bp | AGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGAACCTCCCTGAGCTCTaGCCTGTCCACATGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAWLPYTGMCLEDLHQFLNLPEL*PVHMDA Trigger: GGCATCCATGTGGACAGGCAAGAGCTCAGGGAGGTT...CAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR CAA 90 bp | CAAGCCCACACAGCTGATGGCAGAAGGATTTGCCACCAATGGCTGTGCACGGGATCGGTTCTCCTCCTCTaGCAAGGGCAGACTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QAHTADGRRICHQWLCTGSVLLL*QGQTVL Trigger: AAGAACAGTCTGCCCTTGCAAGAGGAGGAGAACCGA...TCCCGTGCACAGCCATTGGTGGCAAATCCTTCTGCCATCAGCTGTGTGGGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS GCA 90 bp | TGTCTTGTCTCTCAGCCACTCAAACTCAAGGTCCTGGTTACTTTCTaGCTCGCAGGTCAGCGTGAGGCTCTCACCTTCCTGGACTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLVSQPLKLKVLVTF*LAGQREALTFLDFR Trigger: CCTGAAGTCCAGGAAGGTGAGAGCCTCACGCTGACCTGCGAGGCAGAAAGTAACCAGGACCTTGAGTTTGAGTGGCTGAGAGACAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS GCA 90 bp | CGATGTATTTCTCTCCCTGGTCTCCTGGAGCCCTCTTGTCACCGTTaGTGCCCTGAAGGAGAGCCATCTCTTCTGGGAGCTTATCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: RCISLPGLLEPSCHR*CPEGEPSLLGAYLT Trigger: AGTCAGATAAGCTCCCAGAAGAGATGGCTCTCCTTCAGGGCAGCAACGGTGACAAGAGGGCTCCAGGAGACCAGGGAGAGAAATACATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034650.15 |
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| CDS CCA 90 bp | GCAGGTCAGCGTGAGGCTCTCACCTTCCTGGACTTCAGGGGCAGTTaGATTCACTTGAACATCAGACACATAGTTCACCAGCAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGQREALTFLDFRGS*IHLNIRHIVHQQLQ Trigger: CTGGAGCTGCTGGTGAACTATGTGTCTGATGTTCAAGTGAATCCAACTGCCCCTGAAGTCCAGGAAGGTGAGAGCCTCACGCTGACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CCA 90 bp | CAGGGAGTTGGAGGCTGTACACTCTGCACCTGTCTCCAGAAGCTCTaGCGTCACAAGGACATTCAAGGTGCTCACTACTGTCTGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: QGVGGCTLCTCLQKL*RHKDIQGAHYCLWI Trigger: GATCCACAGACAGTAGTGAGCACCTTGAATGTCCTTGTGACGCCAGAGCTTCTGGAGACAGGTGCAGAGTGTACAGCCTCCAACTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS-3UTR CAA 90 bp | CTAAGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACCGTGAGGGGCCACACTaGAGAAGGGCTGTGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRECGKLGLSSLQRKQNNREGPH*RRAVLP Trigger: GGGCAGCACAGCCCTTCTCAAGTGTGGCCCCTCACG...GTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | CACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGAAAACCTCCCTGAGCTCTaGCCTGTCCACATGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: HRDVSGGLTPVPDHYPKENLPEL*PVHMDA Trigger: GGCATCCATGTGGACAGGCAAGAGCTCAGGGAGGTT...TTCCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTACACCAATGGTGGTGGTGTTaGAGCCCAGGGAGTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QRNSAWLPYTGMCLEDLHQWWWC*SPGSWR Trigger: CCTCCAACTCCCTGGGCTCAAACACCACCACCATTG...GTGTAAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | CACAGGGATGTGTCTGGAGGACTTACACCAGTTCCTGACCACTACCCAAAGGAAGCTGAGGCCAGTGGTTaGGCTGGAGTCAGGTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: HRDVSGGLTPVPDHYPKEAEASG*AGVRYE Trigger: CTCATACCTGACTCCAGCCAAACCACTGGCCTCAGC...TTCCTTTGGGTAGTGGTCAGGAACTGGTGTAAGTCCTCCAGACACATCCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS TCA 90 bp | ACTCAAACTCAAGGTCCTGGTTACTTTCTGCCTCGCAGGTCAGCGTaGGGCTCTCACCTTCCTGGACTTCAGGGGCAGTTGGATTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: TQTQGPGYFLPRRSA*GSHLPGLQGQLDSL Trigger: AAGTGAATCCAACTGCCCCTGAAGTCCAGGAAGGTGAGAGCCTCACGCTGACCTGCGAGGCAGAAAGTAACCAGGACCTTGAGTTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS GCA 90 bp | CTGCACCTGTCTCCAGAAGCTCTGGCGTCACAAGGACATTCAAGGTaGTCACTACTGTCTGTGGATCTGGGTTCCATTCAGTTGCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHLSPEALASQGHSR*SLLSVDLGSIQLPN Trigger: GTTCGGCAACTGAATGGAACCCAGATCCACAGACAGTAGTGAGCACCTTGAATGTCCTTGTGACGCCAGAGCTTCTGGAGACAGGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS CCA 90 bp | CTCTTGCCTGTCCACATGGATGCCCACGACATTGGCTTGAATAGTTaGTTCCTCTGGGGCTTCTACAGTGGAAGGGGAATGAACAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLPVHMDAHDIGLNS*FLWGFYSGRGMNRD Trigger: GTCCCTGTTCATTCCCCTTCCACTGTAGAAGCCCCAGAGGAACCAACTATTCAAGCCAATGTCGTGGGCATCCATGTGGACAGGCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147836.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGGATAGTGAAGTGGGGTaGAGGGTTGCCATCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPLGLSRTWPPKLTCRNLDSEVG*RVAICQ Trigger: CTGACAGATGGCAACCCTCAACCCCACTTCACTATC...CAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | CCACTTGGGCTCTCTAGGACCTGGCCCCCAAAGCTCACATGTAGAAATTTGGTAGCCCACGACATTGGCTaGAATAGTTGGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLGLSRTWPPKLTCRNLVAHDIG*NSWFLW Trigger: CCAGAGGAACCAACTATTCAAGCCAATGTCGTGGGC...TACCAAATTTCTACATGTGAGCTTTGGGGGCCAGGTCCTAGAGAGCCCAAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS GCA 90 bp | ATTCAAGGTGCTCACTACTGTCTGTGGATCTGGGTTCCATTCAGTTaGCGAACCATTGACATTCCAGGAGATGGTGGGCTGAGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IQGAHYCLWIWVPFS*RTIDIPGDGGLRMS Trigger: GGACATCCTCAGCCCACCATCTCCTGGAATGTCAATGGTTCGGCAACTGAATGGAACCCAGATCCACAGACAGTAGTGAGCACCTTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | ACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGGCCCACGACATTGGCTaGAATAGTTGGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TKLRETVPGFLTQGCVWRAHDIG*NSWFLW Trigger: CCAGAGGAACCAACTATTCAAGCCAATGTCGTGGGC...CCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | AACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTTCGGTTCTCCTCCTCTaGCAAGGGCAGACTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NSEKQCLASLHRDVSGGLSVLLL*QGQTVL Trigger: AAGAACAGTCTGCCCTTGCAAGAGGAGGAGAACCGA...AAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | AACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGACTTGATAGTGAAGTGGGGTaGAGGGTTGCCATCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NSEKQCLASLHRDVSGGLDSEVG*RVAICQ Trigger: CTGACAGATGGCAACCCTCAACCCCACTTCACTATC...AAGTCCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | CTAAGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACGCTGAGGCCAGTGGTTaGGCTGGAGTCAGGTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRECGKLGLSSLQRKQNNAEASG*AGVRYE Trigger: CTCATACCTGACTCCAGCCAAACCACTGGCCTCAGC...GTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS TCA 90 bp | TTGAACATCAGACACATAGTTCACCAGCAGCTCCAGGGGGTCACTTaGCAGTGTGATGGTAGTTTCCAGGTCCAGACTCTGACACTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LNIRHIVHQQLQGVT*QCDGSFQVQTLTLV Trigger: TACCAGTGTCAGAGTCTGGACCTGGAAACTACCATCACACTGTCAAGTGACCCCCTGGAGCTGCTGGTGAACTATGTGTCTGATGTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS TCA 90 bp | TTCCATTCAGTTGCCGAACCATTGACATTCCAGGAGATGGTGGGCTaGGGATGTCCTGAAGCCTCACAAGACAGATTCAGCACTGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: FHSVAEPLTFQEMVG*GCPEASQDRFSTAF Trigger: GAATGCAGTGCTGAATCTGTCTTGTGAGGCTTCAGGACATCCTCAGCCCACCATCTCCTGGAATGTCAATGGTTCGGCAACTGAATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS TCA 90 bp | ACCGTTGCTGCCCTGAAGGAGAGCCATCTCTTCTGGGAGCTTATCTaGCTTAACTTCAACTACAAATTCACTCTTACGAGTCGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVAALKESHLFWELI*LNFNYKFTLTSRGQ Trigger: CTGCCCCCGACTCGTAAGAGTGAATTTGTAGTTGAAGTTAAGTCAGATAAGCTCCCAGAAGAGATGGCTCTCCTTCAGGGCAGCAACGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034650.15 |
||
| CDS GCA 90 bp | TATTTCTCTCCATCTCCTGTTTTCCCGAGCGTCCACATGGCAGCTTaGCCTTCTTGTAGAAGAAATAGAGAGCAGCACCCAGCACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YFSPSPVFPSVHMAA*PSCRRNREQHPAQQ Trigger: TTGCTGTGCTGGGTGCTGCTCTCTATTTCTTCTACAAGAAGGGCAAGCTGCCATGTGGACGCTCGGGAAAACAGGAGATGGAGAGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098852.3 |
||
| CDS CCA 90 bp | AAGCTCTGGCGTCACAAGGACATTCAAGGTGCTCACTACTGTCTGTaGATCTGGGTTCCATTCAGTTGCCGAACCATTGACATTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KLWRHKDIQGAHYCL*IWVPFSCRTIDIPG Trigger: TCCTGGAATGTCAATGGTTCGGCAACTGAATGGAACCCAGATCCACAGACAGTAGTGAGCACCTTGAATGTCCTTGTGACGCCAGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | ACAAAACTCAGAGAAACAGTGCCTGGCTTCCTTACACAGGGATGTGTCTGGAGGGGACTTCAGGGGCAGTaGGATTCACTTGAACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TKLRETVPGFLTQGCVWRGLQGQ*DSLEHQ Trigger: CTGATGTTCAAGTGAATCCAACTGCCCCTGAAGTCC...CCTCCAGACACATCCCTGTGTAAGGAAGCCAGGCACTGTTTCTCTGAGTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS-3UTR CAA 90 bp | CTAAGGGAATGCGGGAAGCTTGGGCTCAGTAGCCTTCAAAGAAAACAAAACAACGGACTTCAGGGGCAGTaGGATTCACTTGAACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRECGKLGLSSLQRKQNNGLQGQ*DSLEHQ Trigger: CTGATGTTCAAGTGAATCCAACTGCCCCTGAAGTCC...GTTGTTTTGTTTTCTTTGAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS GCA 72 bp | GGGCGCGGGATGCACGGGTTGGGGATGCGCCCCGGCTaGGCCTCTCTGCCGGGACTCCAGCACCCAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: GRGMHGLGMRPG*ASLPGLQHPAS Trigger: GGATGCTGGGTGCTGGAGTCCCGGCAGAGAGGCGCAGCCGGGGCGCATCCCCAACCCGTGCATCCCGCGCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS GCA 72 bp | CAGCAACAGGCGGGCGCGGGATGCACGGGTTGGGGATaGGCCCCGGCTGCGCCTCTCTGCCGGGACTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QQQAGAGCTGWG*APAAPLCRDSS Trigger: GCTGGAGTCCCGGCAGAGAGGCGCAGCCGGGGCGCATCCCCAACCCGTGCATCCCGCGCCCGCCTGTTGCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS CCA 72 bp | CTTTTCCAGCAACAGGCGGGCGCGGGATGCACGGGTTaGGGATGCGCCCCGGCTGCGCCTCTCTGCCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LFQQQAGAGCTG*GCAPAAPLCRD Trigger: GTCCCGGCAGAGAGGCGCAGCCGGGGCGCATCCCCAACCCGTGCATCCCGCGCCCGCCTGTTGCTGGAAAAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
||
| CDS CCA 72 bp | CAGGTCGGGCGTGGGTACTGGCTGCTTTTCCTCTCCTaGCACACCCGCGGCACGGCGACAGCAGCAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QVGRGYWLLFLS*HTRGTATAAAG Trigger: GCCTGCTGCTGCTGTCGCCGTGCCGCGGGTGTGCCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS CCA 72 bp | GCCCACTTCTGCCTCCACCAGGTCGGGCGTGGGTACTaGCTGCTTTTCCTCTCCTGGCACACCCGCGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: AHFCLHQVGRGY*LLFLSWHTRGT Trigger: CGTGCCGCGGGTGTGCCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS CCA 72 bp | GCCCACTTCTGCCTCCACCAGGTCGGGCGTGGGTACTaGCTGCTTTTCCTCTCCCGCGGCACGGCGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AHFCLHQVGRGY*LLFLSRGTATA Trigger: TGCTGTCGCCGTGCCGCGGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216002.2 |
||
| CDS CCA 72 bp | CTGTGCTGCCCACTTCTGCCTCCACCAGGTCGGGCGTaGGTACTGGCTGCTTTTCCTCTCCCGCGGCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: LCCPLLPPPGRA*VLAAFPLPRHG Trigger: GCCGTGCCGCGGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGTGGGCAGCACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216002.2 |
||
| CDS GCA 72 bp | ACTTCTGCCTCCACCAGGTCGGGCGTGGGTACTGGCTaGTTTTCCTCTCCTGGCACACCCGCGGCACGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: TSASTRSGVGTG*FSSPGTPAARR Trigger: TCGCCGTGCCGCGGGTGTGCCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS GCA 72 bp | ACTTCTGCCTCCACCAGGTCGGGCGTGGGTACTGGCTaGTTTTCCTCTCCCGCGGCACGGCGACAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TSASTRSGVGTG*FSSPAARRQQQ Trigger: CTGCTGCTGTCGCCGTGCCGCGGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216002.2 |
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| CDS GCA 72 bp | GGGGCCACACTTGAGAAGGGCTGTGCTGCCCACTTCTaGCTCCACCAGGTCGGGCGTGGGTACTGGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GATLEKGCAAHF*LHQVGRGYWLL Trigger: AAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGTGGGCAGCACAGCCCTTCTCAAGTGTGGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 ENSMUST00000149241.8 ENSMUST00000216002.2 |
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| CDS CCA 72 bp | CTGTGCTGCCCACTTCTGCCTCCACCAGGTCGGGCGTaGGTACTGGCTGCTTTTCCTCTCCTGGCACACCCG | + |
|
Preference number: 6 (lower is better) Translates to: LCCPLLPPPGRA*VLAAFPLLAHP Trigger: CGGGTGTGCCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGTGGGCAGCACAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CAA 90 bp | CAGTCCACTTGGCTGAAGTTGCCTGAGGCCCGTGAGGGGCCACACTaGAGAAGGGCTGTGCTGCCCACTTCTGCCTCCACCAGGTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSTWLKLPEAREGPH*RRAVLPTSASTRSG Trigger: GCCCGACCTGGTGGAGGCAGAAGTGGGCAGCACAGCCCTTCTCAAGTGTGGCCCCTCACGGGCCTCAGGCAACTTCAGCCAAGTGGACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 ENSMUST00000147836.2 ENSMUST00000149241.8 ENSMUST00000216002.2 |
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| CDS CCA 72 bp | CTGTGCTGCCCACTTCTGCCTCCACCAGGTCGGGCGTaGGTACTGGCTGCTTTTCCTCTCCTGGCACACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LCCPLLPPPGRA*VLAAFPLLAHL Trigger: GAGGTGTGCCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGTGGGCAGCACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| CDS CAA 72 bp | TGGCTGAAGTTGCCTGAGGCCCGTGAGGGGCCACACTaGAGAAGGGCTGTGCTGCCCACTTCTGCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: WLKLPEAREGPH*RRAVLPTSAST Trigger: GGTGGAGGCAGAAGTGGGCAGCACAGCCCTTCTCAAGTGTGGCCCCTCACGGGCCTCAGGCAACTTCAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 ENSMUST00000147836.2 ENSMUST00000149241.8 ENSMUST00000216002.2 |
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| CDS CCA 72 bp | TACCGTCCCCCTGCTTCCCGTCTCACGTTGTTTAGCTaGAGGACGGGACCCTTTCCCAGCAGCTGGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YRPPASRLTLFS*RTGPFPSSWPV Trigger: GACAGGCCAGCTGCTGGGAAAGGGTCCCGTCCTCCAGCTAAACAACGTGAGACGGGAAGCAGGGGGACGGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CCA 72 bp | GCCCACTTCTGCCTCCACCAGGTCGGGCGTGGGTACTaGCTGCTTTTCCTCTCCTGGCACACCTCCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: AHFCLHQVGRGY*LLFLSWHTSKL Trigger: CAGTTTGGAGGTGTGCCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| CDS GCA 72 bp | GCCAGAGTAGCCACCGAGTCTTGGAGGCTAAGGCGGTaGTCATATTCACCAGGTTCCCGCTGGCCCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARVATESWRLRR*SYSPGSRWPLP Trigger: AGGCAAGGGCCAGCGGGAACCTGGTGAATATGAGCACCGCCTTAGCCTCCAAGACTCGGTGGCTACTCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 ENSMUST00000147836.2 ENSMUST00000216002.2 |
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| CDS GCA 72 bp | ACTTCTGCCTCCACCAGGTCGGGCGTGGGTACTGGCTaGTTTTCCTCTCCTGGCACACCTCCAAACTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: TSASTRSGVGTG*FSSPGTPPNWR Trigger: ACGCCAGTTTGGAGGTGTGCCAGGAGAGGAAAAGCAGCCAGTACCCACGCCCGACCTGGTGGAGGCAGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149241.8 |
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| CDS CAA 90 bp | ATCATGGGGAGTGACGTGACTCAGGGCCAGAGTAGCCACCGAGTCTaGGAGGCTAAGGCGGTGCTCATATTCACCAGGTTCCCGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: IMGSDVTQGQSSHRV*EAKAVLIFTRFPLA Trigger: GGCCAGCGGGAACCTGGTGAATATGAGCACCGCCTTAGCCTCCAAGACTCGGTGGCTACTCTGGCCCTGAGTCACGTCACTCCCCATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 ENSMUST00000147836.2 ENSMUST00000216002.2 |
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| CDS GCA 72 bp | TCTCTCCCTGGTCTCCTGGAGCCCTCTTGTCACCGTTaGTGCCCTGAAGGAGAGCCATCTCTTCTGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLPGLLEPSCHR*CPEGEPSLLGA Trigger: AGCTCCCAGAAGAGATGGCTCTCCTTCAGGGCAGCAACGGTGACAAGAGGGCTCCAGGAGACCAGGGAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034650.15 |
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| CDS CAA 72 bp | ATGCAGAGATACCGTCCCCCTGCTTCCCGTCTCACGTaGTTTAGCTGGAGGACGGGACCCTTTCCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MQRYRPPASRLT*FSWRTGPFPSS Trigger: GCTGCTGGGAAAGGGTCCCGTCCTCCAGCTAAACAACGTGAGACGGGAAGCAGGGGGACGGTATCTCTGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS TCA 72 bp | CAAGGTCCTGGTTACTTTCTGCCTCGCAGGTCAGCGTaGGGCTCTCACCTTCCTGGACTTCAGGGGCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QGPGYFLPRRSA*GSHLPGLQGQL Trigger: CAACTGCCCCTGAAGTCCAGGAAGGTGAGAGCCTCACGCTGACCTGCGAGGCAGAAAGTAACCAGGACCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS TCA 72 bp | GACCACAGGAACATTCGCTCATCATGGGGAGTGACGTaGCTCAGGGCCAGAGTAGCCACCGAGTCTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DHRNIRSSWGVT*LRARVATESWR Trigger: CCTCCAAGACTCGGTGGCTACTCTGGCCCTGAGTCACGTCACTCCCCATGATGAGCGAATGTTCCTGTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147836.2 |
||
| CDS GCA 72 bp | GGCGGTGCTCATATTCACCAGGTTCCCGCTGGCCCTTaGCTTGGTGCACACGGAAAATCAGTATCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GGAHIHQVPAGP*LGAHGKSVSAS Trigger: AGAGGCAGATACTGATTTTCCGTGTGCACCAAGGCAAGGGCCAGCGGGAACCTGGTGAATATGAGCACCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 ENSMUST00000147836.2 ENSMUST00000216002.2 |
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| CDS GCA 72 bp | TACGATTCAAGCCAGGAACTCTGGGGACAGATGCCATaGAGAGATACCGTCCCCCTGCTTCCCGTCTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: YDSSQELWGQMP*RDTVPLLPVSR Trigger: ACGTGAGACGGGAAGCAGGGGGACGGTATCTCTGCATGGCATCTGTCCCCAGAGTTCCTGGCTTGAATCGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CAA 72 bp | AGTGACGTGACTCAGGGCCAGAGTAGCCACCGAGTCTaGGAGGCTAAGGCGGTGCTCATATTCACCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SDVTQGQSSHRV*EAKAVLIFTRF Trigger: GAACCTGGTGAATATGAGCACCGCCTTAGCCTCCAAGACTCGGTGGCTACTCTGGCCCTGAGTCACGTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 ENSMUST00000147836.2 ENSMUST00000216002.2 |
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| CDS GCA 72 bp | TCTCAGCCACTCAAACTCAAGGTCCTGGTTACTTTCTaGCTCGCAGGTCAGCGTGAGGCTCTCACCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SQPLKLKVLVTF*LAGQREALTFL Trigger: CAGGAAGGTGAGAGCCTCACGCTGACCTGCGAGGCAGAAAGTAACCAGGACCTTGAGTTTGAGTGGCTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS CCA 72 bp | CCTGTCTTGTCTCTCAGCCACTCAAACTCAAGGTCCTaGTTACTTTCTGCCTCGCAGGTCAGCGTGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PVLSLSHSNSRS*LLSASQVSVRL Trigger: GAGCCTCACGCTGACCTGCGAGGCAGAAAGTAACCAGGACCTTGAGTTTGAGTGGCTGAGAGACAAGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS CAA 90 bp | CGTGAGGCTCTCACCTTCCTGGACTTCAGGGGCAGTTGGATTCACTaGAACATCAGACACATAGTTCACCAGCAGCTCCAGGGGGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: REALTFLDFRGSWIH*NIRHIVHQQLQGVT Trigger: AGTGACCCCCTGGAGCTGCTGGTGAACTATGTGTCTGATGTTCAAGTGAATCCAACTGCCCCTGAAGTCCAGGAAGGTGAGAGCCTCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS CCA 72 bp | TGCTCATATTCACCAGGTTCCCGCTGGCCCTTGCCTTaGTGCACACGGAAAATCAGTATCTGCCTCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSYSPGSRWPLP*CTRKISICLSL Trigger: CAAGGAGAGGCAGATACTGATTTTCCGTGTGCACCAAGGCAAGGGCCAGCGGGAACCTGGTGAATATGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 ENSMUST00000147836.2 ENSMUST00000216002.2 |
||
| CDS CCA 72 bp | TCAGAACAATGGTGGTGGTGTTTGAGCCCAGGGAGTTaGAGGCTGTACACTCTGCACCTGTCTCCAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SEQWWWCLSPGS*RLYTLHLSPEA Trigger: AGCTTCTGGAGACAGGTGCAGAGTGTACAGCCTCCAACTCCCTGGGCTCAAACACCACCACCATTGTTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS CAA 72 bp | GTGCTCATATTCACCAGGTTCCCGCTGGCCCTTGCCTaGGTGCACACGGAAAATCAGTATCTGCCTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLIFTRFPLALA*VHTENQYLPLL Trigger: AAGGAGAGGCAGATACTGATTTTCCGTGTGCACCAAGGCAAGGGCCAGCGGGAACCTGGTGAATATGAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 ENSMUST00000147836.2 ENSMUST00000216002.2 |
||
| CDS TCA 72 bp | TCTGTGGATCTGGGTTCCATTCAGTTGCCGAACCATTaGCATTCCAGGAGATGGTGGGCTGAGGATGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVDLGSIQLPNH*HSRRWWAEDVL Trigger: CAGGACATCCTCAGCCCACCATCTCCTGGAATGTCAATGGTTCGGCAACTGAATGGAACCCAGATCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
||
| CDS TCA 72 bp | CAGCAAGCACCAAGGTACACACTATCACAGCCACGATaGCCACACCTTTGCTCTCTGGCTGTGGCAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: QQAPRYTLSQPR*PHLCSLAVAAF Trigger: AAAAGCTGCCACAGCCAGAGAGCAAAGGTGTGGTCATCGTGGCTGTGATAGTGTGTACCTTGGTGCTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS GCA 72 bp | GCTCACTACTGTCTGTGGATCTGGGTTCCATTCAGTTaGCGAACCATTGACATTCCAGGAGATGGTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: AHYCLWIWVPFS*RTIDIPGDGGL Trigger: CAGCCCACCATCTCCTGGAATGTCAATGGTTCGGCAACTGAATGGAACCCAGATCCACAGACAGTAGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CCA 72 bp | GTCCACATGGATGCCCACGACATTGGCTTGAATAGTTaGTTCCTCTGGGGCTTCTACAGTGGAAGGGGAATG | + |
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Preference number: 6 (lower is better) Translates to: VHMDAHDIGLNS*FLWGFYSGRGM Trigger: CATTCCCCTTCCACTGTAGAAGCCCCAGAGGAACCAACTATTCAAGCCAATGTCGTGGGCATCCATGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147836.2 |
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| CDS CCA 72 bp | CGTGAGGCTCTCACCTTCCTGGACTTCAGGGGCAGTTaGATTCACTTGAACATCAGACACATAGTTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: REALTFLDFRGS*IHLNIRHIVHQ Trigger: CTGGTGAACTATGTGTCTGATGTTCAAGTGAATCCAACTGCCCCTGAAGTCCAGGAAGGTGAGAGCCTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CAA 72 bp | AGTGCTGGGGTCCTTCTTGTTGATAGTGAAGTGGGGTaGAGGGTTGCCATCTGTCAGACACCTGATTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SAGVLLVDSEVG*RVAICQTPDCH Trigger: GTGACAATCAGGTGTCTGACAGATGGCAACCCTCAACCCCACTTCACTATCAACAAGAAGGACCCCAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CAA 72 bp | CTCACCTTCCTGGACTTCAGGGGCAGTTGGATTCACTaGAACATCAGACACATAGTTCACCAGCAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LTFLDFRGSWIH*NIRHIVHQQLQ Trigger: CTGGAGCTGCTGGTGAACTATGTGTCTGATGTTCAAGTGAATCCAACTGCCCCTGAAGTCCAGGAAGGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS CCA 72 bp | CGTCACAAGGACATTCAAGGTGCTCACTACTGTCTGTaGATCTGGGTTCCATTCAGTTGCCGAACCATTGAC | + |
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Preference number: 6 (lower is better) Translates to: RHKDIQGAHYCL*IWVPFSCRTID Trigger: GTCAATGGTTCGGCAACTGAATGGAACCCAGATCCACAGACAGTAGTGAGCACCTTGAATGTCCTTGTGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS TCA 72 bp | TGGTGCACACGGAAAATCAGTATCTGCCTCTCCTTGTaGATCAAAAACCAGTCCACTTGGCTGAAGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: WCTRKISICLSL*IKNQSTWLKLP Trigger: AGGCAACTTCAGCCAAGTGGACTGGTTTTTGATTCACAAGGAGAGGCAGATACTGATTTTCCGTGTGCACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 ENSMUST00000147836.2 ENSMUST00000149241.8 ENSMUST00000216002.2 |
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| CDS CCA 72 bp | AAGGACATTCAAGGTGCTCACTACTGTCTGTGGATCTaGGTTCCATTCAGTTGCCGAACCATTGACATTCCA | + |
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Preference number: 6 (lower is better) Translates to: KDIQGAHYCLWI*VPFSCRTIDIP Trigger: TGGAATGTCAATGGTTCGGCAACTGAATGGAACCCAGATCCACAGACAGTAGTGAGCACCTTGAATGTCCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034650.15 ENSMUST00000098852.3 |
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| CDS TCA 72 bp | GCCCTGAAGGAGAGCCATCTCTTCTGGGAGCTTATCTaGCTTAACTTCAACTACAAATTCACTCTTACGAGT | + |
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Preference number: 6 (lower is better) Translates to: ALKESHLFWELI*LNFNYKFTLTS Trigger: ACTCGTAAGAGTGAATTTGTAGTTGAAGTTAAGTCAGATAAGCTCCCAGAAGAGATGGCTCTCCTTCAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034650.15 |
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