Pregenerated sensors for MC3R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038537Ensembl transcript IDs: ENSMUST00000038532.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCCCGGTAGTGGTCAGGAGGTGGCCGCTGTGAGCCAGGATGCTTaGCGGAAGTCTAAGCACTCTTTCTGCTCACGAGAGCCCTCCGGT | + |
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Preference number: 1 (lower is better) Translates to: SPGSGQEVAAVSQDA*RKSKHSFCSREPSG Trigger: ACCGGAGGGCTCTCGTGAGCAGAAAGAGTGCTTAGACTTCCGGCAAGCATCCTGGCTCACAGCGGCCACCTCCTGACCACTACCGGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR TCA 90 bp | GCAGGCAGGGGCCACAAACCCTGGGTGCCTAGCAATGAACACAGATaGCACTCAGGGCTGCTTTGCCTGATTCTTCCAGGCTATGTGCTA | + |
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Preference number: 1 (lower is better) Translates to: AGRGHKPWVPSNEHR*HSGLLCLILPGYVL Trigger: TAGCACATAGCCTGGAAGAATCAGGCAAAGCAGCCCTGAGTGTCATCTGTGTTCATTGCTAGGCACCCAGGGTTTGTGGCCCCTGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR TCA 90 bp | AATATGTGCAAAGCTCTCCCGGTAGTGGTCAGGAGGTGGCCGCTGTaGGCCAGGATGCTTGCCGGAAGTCTAAGCACTCTTTCTGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: NMCKALPVVVRRWPL*ARMLAGSLSTLSAH Trigger: GTGAGCAGAAAGAGTGCTTAGACTTCCGGCAAGCATCCTGGCTCACAGCGGCCACCTCCTGACCACTACCGGGAGAGCTTTGCACATATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR TCA 90 bp | AGGGCTGCTTTGCCTGATTCTTCCAGGCTATGTGCTAGATCAAACTaGCTTACCCACACACAGATCCTCACAGACAGCCCATCCTACGCC | + |
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Preference number: 1 (lower is better) Translates to: RAALPDSSRLCARSN*LTHTQILTDSPSYA Trigger: GGCGTAGGATGGGCTGTCTGTGAGGATCTGTGTGTGGGTAAGTCAGTTTGATCTAGCACATAGCCTGGAAGAATCAGGCAAAGCAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR TCA 90 bp | GTATTCAAGAGCAGGAGAACACAGACCGAGGGAGATATCACGAGCTaGAGTTGTCTAGGGCAAGAAGGGATCTGGCTGTTGCCAGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: VFKSRRTQTEGDITS*SCLGQEGIWLLPAA Trigger: TGCTGCTGGCAACAGCCAGATCCCTTCTTGCCCTAGACAACTTCAGCTCGTGATATCTCCCTCGGTCTGTGTTCTCCTGCTCTTGAATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR TCA 90 bp | GGAGTAAGTAAGGAGAGAACAAGGAGGCAGACCCAGCTGCTCAAATaGTCACCAACGGCAGCAAGGCAGTTTCTAGTGAAACGCACACCT | + |
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Preference number: 1 (lower is better) Translates to: GVSKERTRRQTQLLK*SPTAARQFLVKRTP Trigger: AGGTGTGCGTTTCACTAGAAACTGCCTTGCTGCCGTTGGTGATCATTTGAGCAGCTGGGTCTGCCTCCTTGTTCTCTCCTTACTTACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR CCA 90 bp | CAATCTCCCACAGAATATGTGCAAAGCTCTCCCGGTAGTGGTCAGGAGGTGGCCTCTCTTGGCTGGATGTaGAACACCTCCACGGGCATC | + |
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Preference number: 2 (lower is better) Translates to: QSPTEYVQSSPGSGQEVASLGWM*NTSTGI Trigger: GATGCCCGTGGAGGTGTTCCACATCCAGCCAAGAGA...GGCCACCTCCTGACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR TCA 90 bp | TTCACTCAATCTCCCACAGAATATGTGCAAAGCTCTCCCGGTAGTGGTCAGGAGCAGGGCTGCTTTGCCTaGTTCTTCCAGGCTATGTGC | + |
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Preference number: 2 (lower is better) Translates to: FTQSPTEYVQSSPGSGQEQGCFA*FFQAMC Trigger: GCACATAGCCTGGAAGAATCAGGCAAAGCAGCCCTG...CTCCTGACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATTGAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTTCACTCAATCTCCCACAGAATATGTGCAAAGCTCTCCCGGTAGTGGTGTGAGCCAGGATGCTTaGCGGAAGTCTAAGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: QGFTQSPTEYVQSSPGSGVSQDA*RKSKHS Trigger: AGAGTGCTTAGACTTCCGGCAAGCATCCTGGCTCAC...ACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATTGAGTGAAGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR CCA 90 bp | CAATCTCCCACAGAATATGTGCAAAGCTCTCCCGGTAGTGGTCAGGAGGTGGCCTTTTTGTCTCTTGGCTaGATGTGGAACACCTCCACG | + |
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Preference number: 2 (lower is better) Translates to: QSPTEYVQSSPGSGQEVAFLSLG*MWNTST Trigger: CGTGGAGGTGTTCCACATCCAGCCAAGAGACAAAAA...GGCCACCTCCTGACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCTTCACTCAATCTCCCACAGAATATGTGCAAAGCTCTCCCGGTAGTGGTAGCAATGAACACAGATaGCACTCAGGGCTGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: QGFTQSPTEYVQSSPGSGSNEHR*HSGLLC Trigger: GCAAAGCAGCCCTGAGTGTCATCTGTGTTCATTGCT...ACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATTGAGTGAAGCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGACCCAGCTGCTCAAATGATCACCAACGGCAGCAAGGCAGTTTCTAGTGAACACTCAGGGCTGCTTTaGCTGATTCTTCCAGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: ADPAAQMITNGSKAVSSEHSGLL*LILPGY Trigger: ATAGCCTGGAAGAATCAGGCAAAGCAGCCCTGAGTG...TTCACTAGAAACTGCCTTGCTGCCGTTGGTGATCATTTGAGCAGCTGGGTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCCACCTCATGTATTCAAGAGCAGGAGAACACAGACCGAGGGAGATATCACAGCAAGCCTGTATGTaGATCTTCTTGCCCCGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SLHLMYSRAGEHRPREISQQACM*IFLPRS Trigger: ACTGCGGGGCAAGAAGATGCACATACAGGCTTGCTG...TGATATCTCCCTCGGTCTGTGTTCTCCTGCTCTTGAATACATGAGGTGGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGAGAGAAATGATGTCTGTATCATGCTAGCAGGAGAAACTCAAGCACGGTCCCCGGTCTGGTTGGCTTaGAGCACAGTTACTGGTACA | + |
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Preference number: 2 (lower is better) Translates to: QERNDVCIMLAGETQARSPVWLA*STVTGT Trigger: TGTACCAGTAACTGTGCTTCAAGCCAACCAGACCGG...GGACCGTGCTTGAGTTTCTCCTGCTAGCATGATACAGACATCATTTCTCTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATCATGCTAGCAGGAGAAACTCAAGCACGGTCCCTCCACCTCATGTATTCAGCACACCTTCCTGCCTaGACTTTCTTCGCGTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: CIMLAGETQARSLHLMYSAHLPA*TFFAFE Trigger: TTCAAACGCGAAGAAAGTGCAGGCAGGAAGGTGTGC...TGAATACATGAGGTGGAGGGACCGTGCTTGAGTTTCTCCTGCTAGCATGATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGACCCAGCTGCTCAAATGATCACCAACGGCAGCAAGGCAGTTTCTAGTGAAGTTGTTTTTGTCTCTTaGCTGGATGTGGAACACCTC | + |
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Preference number: 2 (lower is better) Translates to: ADPAAQMITNGSKAVSSEVVFVS*LDVEHL Trigger: GAGGTGTTCCACATCCAGCCAAGAGACAAAAACAAC...TTCACTAGAAACTGCCTTGCTGCCGTTGGTGATCATTTGAGCAGCTGGGTCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGAGAAATGATGTCTGTATCATGCTAGCAGGAGAAACTCAAGCACGGTCCGCCACAAACCCTGGGTaGCTAGCAATGAACACAGAT | + |
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Preference number: 2 (lower is better) Translates to: QERNDVCIMLAGETQARSATNPG*LAMNTD Trigger: ATCTGTGTTCATTGCTAGGCACCCAGGGTTTGTGGC...GGACCGTGCTTGAGTTTCTCCTGCTAGCATGATACAGACATCATTTCTCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGAACACAGACCGAGGGAGATATCACGAGCTGAAGTTGTCTAGGGCAAGATTGAAGCACAGTTACTaGTACAAAGCCAATAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QENTDRGRYHELKLSRARLKHSY*YKANKQ Trigger: CTGCTTATTGGCTTTGTACCAGTAACTGTGCTTCAA...TCTTGCCCTAGACAACTTCAGCTCGTGATATCTCCCTCGGTCTGTGTTCTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR TCA 72 bp | AAAGCTCTCCCGGTAGTGGTCAGGAGGTGGCCGCTGTaGGCCAGGATGCTTGCCGGAAGTCTAAGCACTCTT | + |
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Preference number: 3 (lower is better) Translates to: KALPVVVRRWPL*ARMLAGSLSTL Trigger: AAGAGTGCTTAGACTTCCGGCAAGCATCCTGGCTCACAGCGGCCACCTCCTGACCACTACCGGGAGAGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR GCA 72 bp | AGCCAGGATGCTTGCCGGAAGTCTAAGCACTCTTTCTaGTCACGAGAGCCCTCCGGTCTGGTTGGCTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: SQDACRKSKHSF*SREPSGLVGLK Trigger: CTTCAAGCCAACCAGACCGGAGGGCTCTCGTGAGCAGAAAGAGTGCTTAGACTTCCGGCAAGCATCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR GCA 72 bp | GCAGCACACAGCGGTGTTATACAGCAAGCCTGTATGTaGATCTTCTTGCCCCGCAGTGGTGGGAGTGACTGC | + |
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Preference number: 3 (lower is better) Translates to: AAHSGVIQQACM*IFLPRSGGSDC Trigger: GCAGTCACTCCCACCACTGCGGGGCAAGAAGATGCACATACAGGCTTGCTGTATAACACCGCTGTGTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR GCA 72 bp | AAAGCCAATAAGCAGGCAGGGGCCACAAACCCTGGGTaGCTAGCAATGAACACAGATGACACTCAGGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: KANKQAGATNPG*LAMNTDDTQGC Trigger: GCAGCCCTGAGTGTCATCTGTGTTCATTGCTAGGCACCCAGGGTTTGTGGCCCCTGCCTGCTTATTGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR GCA 72 bp | GTTTTCAGGGCTTCACTCAATCTCCCACAGAATATGTaGAAAGCTCTCCCGGTAGTGGTCAGGAGGTGGCCG | + |
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Preference number: 3 (lower is better) Translates to: VFRASLNLPQNM*KALPVVVRRWP Trigger: CGGCCACCTCCTGACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATTGAGTGAAGCCCTGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR TCA 72 bp | AGCAGGAGAACACAGACCGAGGGAGATATCACGAGCTaGAGTTGTCTAGGGCAAGAAGGGATCTGGCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: SRRTQTEGDITS*SCLGQEGIWLL Trigger: CAACAGCCAGATCCCTTCTTGCCCTAGACAACTTCAGCTCGTGATATCTCCCTCGGTCTGTGTTCTCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCACCTCATGTATTCAAGAGCAGGAGAACACAGACCGAGGGAGATATCACGAGAGCCGGAAAGGAGCTaGGGAGTAAGTAAGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LHLMYSRAGEHRPREISREPERS*GVSKER Trigger: TCTCTCCTTACTTACTCCCAAGCTCCTTTCCGGCTC...TCGTGATATCTCCCTCGGTCTGTGTTCTCCTGCTCTTGAATACATGAGGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGACCGAGGGAGATATCACGAGCTGAAGTTGTCTAGGGCAAGAAGGGATCTGCGTTGTTTTTGTCTCTaGGCTGGATGTGGAACACCT | + |
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Preference number: 3 (lower is better) Translates to: TDRGRYHELKLSRARRDLRCFCL*AGCGTP Trigger: AGGTGTTCCACATCCAGCCAAGAGACAAAAACAACG...CAGATCCCTTCTTGCCCTAGACAACTTCAGCTCGTGATATCTCCCTCGGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR TCA 72 bp | TTGCCTGATTCTTCCAGGCTATGTGCTAGATCAAACTaGCTTACCCACACACAGATCCTCACAGACAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: LPDSSRLCARSN*LTHTQILTDSP Trigger: TGGGCTGTCTGTGAGGATCTGTGTGTGGGTAAGTCAGTTTGATCTAGCACATAGCCTGGAAGAATCAGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR TCA 72 bp | CTACCTTGCAGTGGCCAGGATCCTAGGACCTCTCACTaGCTAGAGCGCTTTGATGTATTAGGTTTGAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: LPCSGQDPRTSH*LERFDVLGLKL Trigger: AAGCTTCAAACCTAATACATCAAAGCGCTCTAGTCAGTGAGAGGTCCTAGGATCCTGGCCACTGCAAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR TCA 72 bp | TATCTCCCAAGCATCACGATTAAAGCAAGAGAGAAATaGTGTCTGTATCATGCTAGCAGGAGAAACTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: YLPSITIKAREK*CLYHASRRNSS Trigger: GCTTGAGTTTCTCCTGCTAGCATGATACAGACATCATTTCTCTCTTGCTTTAATCGTGATGCTTGGGAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR GCA 90 bp | GGGAGATATCACGAGCTGAAGTTGTCTAGGGCAAGAAGGGATCTGGCTGTTGCCAGCAGGGGGCAGCACTaGGATGCGCTGGACGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GRYHELKLSRARRDLAVASRGQH*DALDVE Trigger: CTCCACGTCCAGCGCATCGCAGTGCTGCCCCCTGCT...GGCAACAGCCAGATCCCTTCTTGCCCTAGACAACTTCAGCTCGTGATATCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CCA 90 bp | GCTTCACTCAATCTCCCACAGAATATGTGCAAAGCTCTCCCGGTAGTGGTCAGGTGCCGCTCCGGTTGCTaGCAGGAGGGGCTGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: ASLNLPQNMCKALPVVVRCRSGC*QEGLQG Trigger: ACCCTGCAGCCCCTCCTGCCAGCAACCGGAGCGGCA...CCTGACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATTGAGTGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR GCA 90 bp | ACAGACCGAGGGAGATATCACGAGCTGAAGTTGTCTAGGGCAAGAAGGGATCTGGCTGGCAGGAGGGGCTaGAGGGTGCTCAGAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: TDRGRYHELKLSRARRDLAGRRG*RVLREV Trigger: AACCTCTCTGAGCACCCTGCAGCCCCTCCTGCCAGC...CAGATCCCTTCTTGCCCTAGACAACTTCAGCTCGTGATATCTCCCTCGGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR GCA 90 bp | CACCTCATGTATTCAAGAGCAGGAGAACACAGACCGAGGGAGATATCACGAGCTGGAGGGGCTGCAGGGTaGTCAGAGAGGTTAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HLMYSRAGEHRPREISRAGGAAG*SERLGS Trigger: GCTGCCTAACCTCTCTGAGCACCCTGCAGCCCCTCC...AGCTCGTGATATCTCCCTCGGTCTGTGTTCTCCTGCTCTTGAATACATGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR GCA 90 bp | CTTTGCCTGATTCTTCCAGGCTATGTGCTAGATCAAACTGACTTACCCACACACCACTGCCGCTCCGGTTaGTGGCAGGAGGGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LCLILPGYVLDQTDLPTHHCRSG*WQEGLQ Trigger: CTGCAGCCCCTCCTGCCAGCAACCGGAGCGGCAGTG...GTGTGTGGGTAAGTCAGTTTGATCTAGCACATAGCCTGGAAGAATCAGGCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CCA 90 bp | AATCTCCCACAGAATATGTGCAAAGCTCTCCCGGTAGTGGTCAGGAGGTGGCCGATGATGAGGACCAGGTaGAGGAAGAAAGGCGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: NLPQNMCKALPVVVRRWPMMRTR*RKKGAQ Trigger: CTGGGCGCCTTTCTTCCTCCACCTGGTCCTCATCAT...CGGCCACCTCCTGACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR CAA 72 bp | GAGAACACAGACCGAGGGAGATATCACGAGCTGAAGTaGTCTAGGGCAAGAAGGGATCTGGCTGTTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ENTDRGRYHELK*SRARRDLAVAS Trigger: GCTGGCAACAGCCAGATCCCTTCTTGCCCTAGACAACTTCAGCTCGTGATATCTCCCTCGGTCTGTGTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CCA 90 bp | ATAATAACAACCATGACAACGGCACAGGGAGAAGGGGGTCATGTCTCTGTGCAGGCTGGACGTGGAGCCTaGCGAAGAGGAACATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: IITTMTTAQGEGGHVSVQAGRGA*RRGTCG Trigger: TCCACATGTTCCTCTTCGCCAGGCTCCACGTCCAGC...CTGCACAGAGACATGACCCCCTTCTCCCTGTGCCGTTGTCATGGTTGTTATTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR CAA 72 bp | GATAGACAACGCACTTACCAGGAGCCGGAAAGGAGCTaGGGAGTAAGTAAGGAGAGAACAAGGAGGCAGACC | + |
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Preference number: 4 (lower is better) Translates to: DRQRTYQEPERS*GVSKERTRRQT Trigger: GGTCTGCCTCCTTGTTCTCTCCTTACTTACTCCCAAGCTCCTTTCCGGCTCCTGGTAAGTGCGTTGTCTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR TCA 90 bp | ACAGACCGAGGGAGATATCACGAGCTGAAGTTGTCTAGGGCAAGAAGGGATCTGTATATAGGGTGCCCATaGGGAGCACCATGGCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TDRGRYHELKLSRARRDLYIGCP*GAPWRR Trigger: TCTTCGCCATGGTGCTCCTCATGGGCACCCTATATA...CAGATCCCTTCTTGCCCTAGACAACTTCAGCTCGTGATATCTCCCTCGGTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR GCA 90 bp | CTCCACCTCATGTATTCAAGAGCAGGAGAACACAGACCGAGGGAGATATCACGAGGCTTGATGAAGACCTaGTCACAGAACCCACTGCCG | + |
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Preference number: 4 (lower is better) Translates to: LHLMYSRAGEHRPREISRGLMKT*SQNPLP Trigger: CGGCAGTGGGTTCTGTGAGCAGGTCTTCATCAAGCC...TCGTGATATCTCCCTCGGTCTGTGTTCTCCTGCTCTTGAATACATGAGGTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR GCA 90 bp | CAAGAGAGAAATGATGTCTGTATCATGCTAGCAGGAGAAACTCAAGCACGGTCCGGGCCGTGTAGCAGATaGAGTAGGGATTGGTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QERNDVCIMLAGETQARSGPCSR*SRDWWG Trigger: GCCCCACCAATCCCTACTGCATCTGCTACACGGCCC...GGACCGTGCTTGAGTTTCTCCTGCTAGCATGATACAGACATCATTTCTCTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR GCA 90 bp | GGGAGATATCACGAGCTGAAGTTGTCTAGGGCAAGAAGGGATCTGGCTGTTGCCCCAAGTTCATGCTGTTaGAGCCGCAGAGAATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GRYHELKLSRARRDLAVAPSSCC*SRRESP Trigger: AGGAGATTCTCTGCGGCTGCAACAGCATGAACTTGG...GGCAACAGCCAGATCCCTTCTTGCCCTAGACAACTTCAGCTCGTGATATCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CCA 90 bp | ATAATAACAACCATGACAACGGCACAGGGAGAAGGGGGTCATGTCTCTGTGCAGACCTGTCGATGGCAATaGCCAGGAGGTTGCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: IITTMTTAQGEGGHVSVQTCRWQ*PGGCRW Trigger: CCATCTGCAACCTCCTGGCCATTGCCATCGACAGGT...CTGCACAGAGACATGACCCCCTTCTCCCTGTGCCGTTGTCATGGTTGTTATTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR GCA 90 bp | ACATTGTTTTCAGGGCTTCACTCAATCTCCCACAGAATATGTGCAAAGCTCTCCTTCATGCAGGAGTGCTaGTGTGGGGCCACCACGCCA | + |
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Preference number: 4 (lower is better) Translates to: TLFSGLHSISHRICAKLSFMQEC*CGATTP Trigger: TGGCGTGGTGGCCCCACAGCAGCACTCCTGCATGAA...GGAGAGCTTTGCACATATTCTGTGGGAGATTGAGTGAAGCCCTGAAAACAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CCA 90 bp | GCAGACCCAGCTGCTCAAATGATCACCAACGGCAGCAAGGCAGTTTCTAGTGAAATGTGCTGGATAAACTaGTCCTCCAAGGTCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: ADPAAQMITNGSKAVSSEMCWIN*SSKVRE Trigger: CTCCCTGACCTTGGAGGACCAGTTTATCCAGCACAT...TTCACTAGAAACTGCCTTGCTGCCGTTGGTGATCATTTGAGCAGCTGGGTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR CAA 72 bp | TCTTTCTGCTCACGAGAGCCCTCCGGTCTGGTTGGCTaGAAGCACAGTTACTGGTACAAAGCCAATAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SFCSREPSGLVG*KHSYWYKANKQ Trigger: CTGCTTATTGGCTTTGTACCAGTAACTGTGCTTCAAGCCAACCAGACCGGAGGGCTCTCGTGAGCAGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR TCA 90 bp | ACATTGTTTTCAGGGCTTCACTCAATCTCCCACAGAATATGTGCAAAGCTCTCCGCAGGTTGCCATTCCTaGCCACAGCCAGGATCACCA | + |
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Preference number: 4 (lower is better) Translates to: TLFSGLHSISHRICAKLSAGCHS*PQPGSP Trigger: TGGTGATCCTGGCTGTGGTCAGGAATGGCAACCTGC...GGAGAGCTTTGCACATATTCTGTGGGAGATTGAGTGAAGCCCTGAAAACAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR TCA 90 bp | TGTATCATGCTAGCAGGAGAAACTCAAGCACGGTCCCTCCACCTCATGTATTCAGAACCAGGTAGGTGTTaGAATGGGCCGTGTAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: CIMLAGETQARSLHLMYSEPGRC*NGPCSR Trigger: TCTGCTACACGGCCCATTTCAACACCTACCTGGTTC...TGAATACATGAGGTGGAGGGACCGTGCTTGAGTTTCTCCTGCTAGCATGATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CCA 90 bp | CAAGAGAGAAATGATGTCTGTATCATGCTAGCAGGAGAAACTCAAGCACGGTCCTGGTCTCCAGGGAGTTaGACAGGCTCACCAGCATGT | + |
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Preference number: 4 (lower is better) Translates to: QERNDVCIMLAGETQARSWSPGS*TGSPAC Trigger: ACATGCTGGTGAGCCTGTCCAACTCCCTGGAGACCA...GGACCGTGCTTGAGTTTCTCCTGCTAGCATGATACAGACATCATTTCTCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR CAA 72 bp | GAAACGCACACCTTCCTGCCTGCACTTTCTTCGCGTTaGAAAGGCAGAGACGAAACAGTAGAAGACCATCGT | + |
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Preference number: 4 (lower is better) Translates to: ETHTFLPALSSR*KGRDETVEDHR Trigger: ACGATGGTCTTCTACTGTTTCGTCTCTGCCTTTCAAACGCGAAGAAAGTGCAGGCAGGAAGGTGTGCGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR TCA 90 bp | AAAACTCCAACAATAATAACAACCATGACAACGGCACAGGGAGAAGGGGGTCATCGCAGAGAATCTCCTTaGACGTGTTGCGCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KTPTIITTMTTAQGEGGHRRESP*TCCAAP Trigger: TGGAGCTGCGCAACACGTTCAAGGAGATTCTCTGCG...ATGACCCCCTTCTCCCTGTGCCGTTGTCATGGTTGTTATTATTGTTGGAGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CCA 90 bp | CTCCACCTCATGTATTCAAGAGCAGGAGAACACAGACCGAGGGAGATATCACGAGCGAAGAGGAACATGTaGATATATAGGGTGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: LHLMYSRAGEHRPREISRAKRNM*IYRVPM Trigger: CATGGGCACCCTATATATCCACATGTTCCTCTTCGC...TCGTGATATCTCCCTCGGTCTGTGTTCTCCTGCTCTTGAATACATGAGGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR GCA 90 bp | AAAACTCCAACAATAATAACAACCATGACAACGGCACAGGGAGAAGGGGGTCATAAGTACATGGGAGAGTaGAGGTTGCCATTCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: KTPTIITTMTTAQGEGGHKYMGE*RLPFLT Trigger: GGTCAGGAATGGCAACCTGCACTCTCCCATGTACTT...ATGACCCCCTTCTCCCTGTGCCGTTGTCATGGTTGTTATTATTGTTGGAGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| 3UTR CAA 72 bp | AGATGTAAGTTCTGGAAGGGAGCAGCAAATATCACATaGTTTTCAGGGCTTCACTCAATCTCCCACAGAATA | + |
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Preference number: 4 (lower is better) Translates to: RCKFWKGAANIT*FSGLHSISHRI Trigger: TATTCTGTGGGAGATTGAGTGAAGCCCTGAAAACAATGTGATATTTGCTGCTCCCTTCCAGAACTTACATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS GCA 90 bp | GCAGGAGTGCTGCTGTGGGGCCACCACGCCAGCAGGGGGCAGCACTaGGATGCGCTGGACGTGGAGCCTGGCGAAGAGGAACATGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: AGVLLWGHHASRGQH*DALDVEPGEEEHVD Trigger: ATCCACATGTTCCTCTTCGCCAGGCTCCACGTCCAGCGCATCGCAGTGCTGCCCCCTGCTGGCGTGGTGGCCCCACAGCAGCACTCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS CCA 90 bp | CAGGATAGTGATGGTGACAGCCCCCTTCATGCAGGAGTGCTGCTGTaGGGCCACCACGCCAGCAGGGGGCAGCACTGCGATGCGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: QDSDGDSPLHAGVLL*GHHASRGQHCDALD Trigger: GTCCAGCGCATCGCAGTGCTGCCCCCTGCTGGCGTGGTGGCCCCACAGCAGCACTCCTGCATGAAGGGGGCTGTCACCATCACTATCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS GCA 90 bp | CTGACGATGCCCAGAGCCAGGAAGACCTCCGGCTTGATGAAGACCTaGTCACAGAACCCACTGCCGCTCCGGTTGCTGGCAGGAGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LTMPRARKTSGLMKT*SQNPLPLRLLAGGA Trigger: AGCCCCTCCTGCCAGCAACCGGAGCGGCAGTGGGTTCTGTGAGCAGGTCTTCATCAAGCCGGAGGTCTTCCTGGCTCTGGGCATCGTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS GCA 90 bp | CAGAACCCACTGCCGCTCCGGTTGCTGGCAGGAGGGGCTGCAGGGTaGTCAGAGAGGTTAGGCAGCATCGGAGAAACAGAAGACAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: QNPLPLRLLAGGAAG*SERLGSIGETEDRQ Trigger: CTGCCTGTCTTCTGTTTCTCCGATGCTGCCTAACCTCTCTGAGCACCCTGCAGCCCCTCCTGCCAGCAACCGGAGCGGCAGTGGGTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS GCA 90 bp | AGTGCTGCTGTGGGGCCACCACGCCAGCAGGGGGCAGCACTGCGATaGGCTGGACGTGGAGCCTGGCGAAGAGGAACATGTGGATATATA | + |
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Preference number: 5 (lower is better) Translates to: SAAVGPPRQQGAALR*AGRGAWRRGTCGYI Trigger: TATATATCCACATGTTCCTCTTCGCCAGGCTCCACGTCCAGCGCATCGCAGTGCTGCCCCCTGCTGGCGTGGTGGCCCCACAGCAGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS GCA 90 bp | CTGCTCACAGAACCCACTGCCGCTCCGGTTGCTGGCAGGAGGGGCTaGAGGGTGCTCAGAGAGGTTAGGCAGCATCGGAGAAACAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LLTEPTAAPVAGRRG*RVLREVRQHRRNRR Trigger: TCTTCTGTTTCTCCGATGCTGCCTAACCTCTCTGAGCACCCTGCAGCCCCTCCTGCCAGCAACCGGAGCGGCAGTGGGTTCTGTGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCAGCAAATATCACATTGTTTTCAGGGCTTCACTCAATCTCCCACAGAACCACTGCCGCTCCGGTaGCTGGCAGGAGGGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: REQQISHCFQGFTQSPTEPLPLR*LAGGAA Trigger: TGCAGCCCCTCCTGCCAGCAACCGGAGCGGCAGTGG...TTCTGTGGGAGATTGAGTGAAGCCCTGAAAACAATGTGATATTTGCTGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CAA 90 bp | AATCTCCCACAGAATATGTGCAAAGCTCTCCCGGTAGTGGTCAGGAGGTGGCCGGGGTCGATGACGGAGTaGCACATGATGAGAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: NLPQNMCKALPVVVRRWPGSMTE*HMMRTR Trigger: CCTGGTTCTCATCATGTGCAACTCCGTCATCGACCC...CGGCCACCTCCTGACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CAA 90 bp | GGAGAGAACAAGGAGGCAGACCCAGCTGCTCAAATGATCACCAACGGCAGCAAGCCCAAGTTCATGCTGTaGCAGCCGCAGAGAATCTCC | + |
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Preference number: 5 (lower is better) Translates to: GENKEADPAAQMITNGSKPKFML*QPQRIS Trigger: GGAGATTCTCTGCGGCTGCAACAGCATGAACTTGGG...CTTGCTGCCGTTGGTGATCATTTGAGCAGCTGGGTCTGCCTCCTTGTTCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCTTCACTCAATCTCCCACAGAATATGTGCAAAGCTCTCCCGGTAGTGGTAGGAAGACCTCCGGCTaGATGAAGACCTGCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: QGFTQSPTEYVQSSPGSGRKTSG*MKTCSQ Trigger: CTGTGAGCAGGTCTTCATCAAGCCGGAGGTCTTCCT...ACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATTGAGTGAAGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CAA 90 bp | TGTATCATGCTAGCAGGAGAAACTCAAGCACGGTCCCTCCACCTCATGTATTCAATCTCCTTGAACGTGTaGCGCAGCTCCAGGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: CIMLAGETQARSLHLMYSISLNV*RSSRLR Trigger: CCGCAGCCTGGAGCTGCGCAACACGTTCAAGGAGAT...TGAATACATGAGGTGGAGGGACCGTGCTTGAGTTTCTCCTGCTAGCATGATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS-3UTR CAA 90 bp | TTCACTCAATCTCCCACAGAATATGTGCAAAGCTCTCCCGGTAGTGGTCAGGAGGTCAGGGAGTCGCTGTaGATCACGGCGATCATGATG | + |
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Preference number: 5 (lower is better) Translates to: FTQSPTEYVQSSPGSGQEVRESL*ITAIMM Trigger: CATCATGATCGCCGTGATCAACAGCGACTCCCTGAC...CTCCTGACCACTACCGGGAGAGCTTTGCACATATTCTGTGGGAGATTGAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS CCA 90 bp | ACCAGGGAGATGCAAATCATAGAGTCGAAGATATTATCCATGTGCTaGATAAACTGGTCCTCCAAGGTCAGGGAGTCGCTGTTGATCACG | + |
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Preference number: 5 (lower is better) Translates to: TREMQIIESKILSMC*INWSSKVRESLLIT Trigger: CGTGATCAACAGCGACTCCCTGACCTTGGAGGACCAGTTTATCCAGCACATGGATAATATCTTCGACTCTATGATTTGCATCTCCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS GCA 72 bp | CTGCTGTGGGGCCACCACGCCAGCAGGGGGCAGCACTaGGATGCGCTGGACGTGGAGCCTGGCGAAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLWGHHASRGQH*DALDVEPGEEE Trigger: TTCCTCTTCGCCAGGCTCCACGTCCAGCGCATCGCAGTGCTGCCCCCTGCTGGCGTGGTGGCCCCACAGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS GCA 72 bp | CCCAGAGCCAGGAAGACCTCCGGCTTGATGAAGACCTaGTCACAGAACCCACTGCCGCTCCGGTTGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PRARKTSGLMKT*SQNPLPLRLLA Trigger: TGCCAGCAACCGGAGCGGCAGTGGGTTCTGTGAGCAGGTCTTCATCAAGCCGGAGGTCTTCCTGGCTCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS CAA 72 bp | AGACTGACGATGCCCAGAGCCAGGAAGACCTCCGGCTaGATGAAGACCTGCTCACAGAACCCACTGCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: RLTMPRARKTSG*MKTCSQNPLPL Trigger: GAGCGGCAGTGGGTTCTGTGAGCAGGTCTTCATCAAGCCGGAGGTCTTCCTGGCTCTGGGCATCGTCAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS CAA 90 bp | TTTTCCATCAGACTGACGATGCCCAGAGCCAGGAAGACCTCCGGCTaGATGAAGACCTGCTCACAGAACCCACTGCCGCTCCGGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FSIRLTMPRARKTSG*MKTCSQNPLPLRLL Trigger: CAGCAACCGGAGCGGCAGTGGGTTCTGTGAGCAGGTCTTCATCAAGCCGGAGGTCTTCCTGGCTCTGGGCATCGTCAGTCTGATGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS CCA 72 bp | ATGCGCTGGACGTGGAGCCTGGCGAAGAGGAACATGTaGATATATAGGGTGCCCATGAGGAGCACCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: MRWTWSLAKRNM*IYRVPMRSTMA Trigger: CGCCATGGTGCTCCTCATGGGCACCCTATATATCCACATGTTCCTCTTCGCCAGGCTCCACGTCCAGCGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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| CDS CAA 72 bp | TGGATAAACTGGTCCTCCAAGGTCAGGGAGTCGCTGTaGATCACGGCGATCATGATGGTCTCCAGGGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: WINWSSKVRESL*ITAIMMVSREL Trigger: CAACTCCCTGGAGACCATCATGATCGCCGTGATCAACAGCGACTCCCTGACCTTGGAGGACCAGTTTATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038532.2 |
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