Pregenerated sensors for MC1R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074037Ensembl transcript IDs: ENSMUST00000098324.4
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCCCCTGCAGCTGGTGGAGGAGGCACTTGACAGAGTAGCCTGCTaGTGTGAGCAGTTGGGTGCCCACCTCTTGGGATTCCCAGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: PPLQLVEEALDRVAC*CEQLGAHLLGFPGA Trigger: GGCTCCTGGGAATCCCAAGAGGTGGGCACCCAACTGCTCACACCAGCAGGCTACTCTGTCAAGTGCCTCCTCCACCAGCTGCAGGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR GCA 90 bp | CCATCCCTGTCTCCTCCACTTCCCGTAGCTGCCCTGGGTGAGCCCTaGAGTCACAGTTACCCTTTCTCCTGGCCCCAGGCACTCTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: PSLSPPLPVAALGEP*SHSYPFSWPQALWV Trigger: AACCCAGAGTGCCTGGGGCCAGGAGAAAGGGTAACTGTGACTGCAGGGCTCACCCAGGGCAGCTACGGGAAGTGGAGGAGACAGGGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR GCA 90 bp | CAGCCTCCCCTGCAGCTGGTGGAGGAGGCACTTGACAGAGTAGCCTaGTGGTGTGAGCAGTTGGGTGCCCACCTCTTGGGATTCCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: QPPLQLVEEALDRVA*WCEQLGAHLLGFPG Trigger: TCCTGGGAATCCCAAGAGGTGGGCACCCAACTGCTCACACCAGCAGGCTACTCTGTCAAGTGCCTCCTCCACCAGCTGCAGGGGAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | CCAGAAGGGCAGTGTCCCATAGAAACAGACCTCAGCCCCTGGTCCTaGTCCACCCTACGTGTGCCTCAGGGACTCTCCACCCCTGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: PEGQCPIETDLSPWS*STLRVPQGLSTPGL Trigger: AAGCCCAGGGGTGGAGAGTCCCTGAGGCACACGTAGGGTGGACCAGGACCAGGGGCTGAGGTCTGTTTCTATGGGACACTGCCCTTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | CTCCTCCCAGAAGGGCAGTGTCCCATAGAAACAGACCTCAGCCCCTaGTCCTGGTCCACCCTACGTGTGCCTCAGGGACTCTCCACCCCT | + |
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Preference number: 1 (lower is better) Translates to: LLPEGQCPIETDLSP*SWSTLRVPQGLSTP Trigger: AGGGGTGGAGAGTCCCTGAGGCACACGTAGGGTGGACCAGGACCAGGGGCTGAGGTCTGTTTCTATGGGACACTGCCCTTCTGGGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR TCA 90 bp | AGAGTTCCCATCCCTGTCTCCTCCACTTCCCGTAGCTGCCCTGGGTaGGCCCTGCAGTCACAGTTACCCTTTCTCCTGGCCCCAGGCACT | + |
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Preference number: 1 (lower is better) Translates to: RVPIPVSSTSRSCPG*ALQSQLPFLLAPGT Trigger: AGTGCCTGGGGCCAGGAGAAAGGGTAACTGTGACTGCAGGGCTCACCCAGGGCAGCTACGGGAAGTGGAGGAGACAGGGATGGGAACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR GCA 90 bp | AGGTGGGGAGAGGTGAAGCTCTTCAGGAGCCTGTGGTCTGACCCTTaGTCAGGGCTAGAGTTCCCATCCCTGTCTCCTCCACTTCCCGTA | + |
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Preference number: 1 (lower is better) Translates to: RWGEVKLFRSLWSDP*SGLEFPSLSPPLPV Trigger: TACGGGAAGTGGAGGAGACAGGGATGGGAACTCTAGCCCTGAGCAAGGGTCAGACCACAGGCTCCTGAAGAGCTTCACCTCTCCCCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | TCTGTGTCCCCAGGGAGCTATGGTGTCAGGCTAAAGGCTGACTCATaGTCCTGTCTTCCAGCAAAGGCTGGCCCTGCCGGGAACCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: SVSPGSYGVRLKADS*SCLPAKAGPAGNQL Trigger: AAGCTGGTTCCCGGCAGGGCCAGCCTTTGCTGGAAGACAGGACCATGAGTCAGCCTTTAGCCTGACACCATAGCTCCCTGGGGACACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | GAGTTGCCTTGTAGGTGGGGAGAGGTGAAGCTCTTCAGGAGCCTGTaGTCTGACCCTTGCTCAGGGCTAGAGTTCCCATCCCTGTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ELPCRWGEVKLFRSL*SDPCSGLEFPSLSP Trigger: AGGAGACAGGGATGGGAACTCTAGCCCTGAGCAAGGGTCAGACCACAGGCTCCTGAAGAGCTTCACCTCTCCCCACCTACAAGGCAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | ACCTTAGCATTTCAACTGCTTCCTGGCTCAGAGCCACACAGGCTGTaGTCAGTGATAAGCCAACAGCCTCCCCTGCAGCTGGTGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: TLAFQLLPGSEPHRL*SVISQQPPLQLVEE Trigger: CTCCTCCACCAGCTGCAGGGGAGGCTGTTGGCTTATCACTGACCACAGCCTGTGTGGCTCTGAGCCAGGAAGCAGTTGAAATGCTAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | GCAAGGAGGCTCCCTCCCTCTGACCTTAGCATTTCAACTGCTTCCTaGCTCAGAGCCACACAGGCTGTGGTCAGTGATAAGCCAACAGCC | + |
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Preference number: 1 (lower is better) Translates to: ARRLPPSDLSISTAS*LRATQAVVSDKPTA Trigger: GGCTGTTGGCTTATCACTGACCACAGCCTGTGTGGCTCTGAGCCAGGAAGCAGTTGAAATGCTAAGGTCAGAGGGAGGGAGCCTCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | TGTGACCACTCTCCCTGTCCTCTCACCCAAACTTCACTCAGCTTCTaGAGAGAGCTAGGGAAGATGGCAAGGAGGCTCCCTCCCTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: CDHSPCPLTQTSLSF*RELGKMARRLPPSD Trigger: GTCAGAGGGAGGGAGCCTCCTTGCCATCTTCCCTAGCTCTCTCCAGAAGCTGAGTGAAGTTTGGGTGAGAGGACAGGGAGAGTGGTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR TCA 90 bp | GGCAGGCAGCTAGCTGTGGCTTCTGAGACTCCCATCTCCCTAATGTaGCCACTCTCCCTGTCCTCTCACCCAAACTTCACTCAGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: GRQLAVASETPISLM*PLSLSSHPNFTQLL Trigger: CAGAAGCTGAGTGAAGTTTGGGTGAGAGGACAGGGAGAGTGGTCACATTAGGGAGATGGGAGTCTCAGAAGCCACAGCTAGCTGCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR GCA 90 bp | ACAAATGGAGATCAGGAAGGGATGAGTACCTGTGGTCTCACAGGATaGAGGCCACTGGATATCACTGTCACCCTCTGCCCAGCGCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: TNGDQEGMSTCGLTG*RPLDITVTLCPAPS Trigger: AGAGGGCGCTGGGCAGAGGGTGACAGTGATATCCAGTGGCCTGCATCCTGTGAGACCACAGGTACTCATCCCTTCCTGATCTCCATTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR GCA 90 bp | AGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATaGGCCACCACCGCCCGGCTTGTCTGTCATTCTTTTAACTTAGAG | + |
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Preference number: 1 (lower is better) Translates to: RNPPASASQVLELKA*ATTARLVCHSFNLE Trigger: CTCTAAGTTAAAAGAATGACAGACAAGCCGGGCGGTGGTGGCGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | TGTCGACCCTTAGACAAATGGAGATCAGGAAGGGATGAGTACCTGTaGTCTCACAGGATGCAGGCCACTGGATATCACTGTCACCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: CRPLDKWRSGRDEYL*SHRMQATGYHCHPL Trigger: CAGAGGGTGACAGTGATATCCAGTGGCCTGCATCCTGTGAGACCACAGGTACTCATCCCTTCCTGATCTCCATTTGTCTAAGGGTCGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR TCA 90 bp | AAGCTCATCCTGTCGACCCTTAGACAAATGGAGATCAGGAAGGGATaGGTACCTGTGGTCTCACAGGATGCAGGCCACTGGATATCACTG | + |
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Preference number: 1 (lower is better) Translates to: KLILSTLRQMEIRKG*VPVVSQDAGHWISL Trigger: CAGTGATATCCAGTGGCCTGCATCCTGTGAGACCACAGGTACTCATCCCTTCCTGATCTCCATTTGTCTAAGGGTCGACAGGATGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR TCA 90 bp | GTGGCTTTCTGTGGTTCCAGCTGGCCTGGCTCAAGAAGTATTGGGTaGGCATCTGTCTCTGTCTCCTTGTCTGGACAGAGAAGATGCTTA | + |
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Preference number: 1 (lower is better) Translates to: VAFCGSSWPGSRSIG*ASVSVSLSGQRRCL Trigger: TAAGCATCTTCTCTGTCCAGACAAGGAGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCACAGAAAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | GAGCCCTGCAGTCACAGTTACCCTTTCTCCTGGCCCCAGGCACTCTaGGTTTCTATTTTAAAGCTCATCCTGTCGACCCTTAGACAAATG | + |
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Preference number: 1 (lower is better) Translates to: EPCSHSYPFSWPQAL*VSILKLILSTLRQM Trigger: CATTTGTCTAAGGGTCGACAGGATGAGCTTTAAAATAGAAACCCAGAGTGCCTGGGGCCAGGAGAAAGGGTAACTGTGACTGCAGGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR GCA 90 bp | ACAATTCTGCTCCATGTGCTGAGGAAGGGTCTCACTTCCTTAAGCTaGCTACTGCATGGCTATGGCTGGGTTTTCATGGCCACAAATCCT | + |
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Preference number: 1 (lower is better) Translates to: TILLHVLRKGLTSLS*LLHGYGWVFMATNP Trigger: AGGATTTGTGGCCATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTTAAGGAAGTGAGACCCTTCCTCAGCACATGGAGCAGAATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR GCA 90 bp | CAAGGTTACGGATGTGTCATATCAGGGGCTGAGATGCTACGGTCCTaGTACAGTGTATGGATGAACCAGAAGGAGCCTGAACAAAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: QGYGCVISGAEMLRS*YSVWMNQKEPEQRD Trigger: ATCCCTTTGTTCAGGCTCCTTCTGGTTCATCCATACACTGTAGCAGGACCGTAGCATCTCAGCCCCTGATATGACACATCCGTAACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | GCTGAGGAAGGGTCTCACTTCCTTAAGCTGCCTACTGCATGGCTATaGCTGGGTTTTCATGGCCACAAATCCTCTTATCAGAAGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: AEEGSHFLKLPTAWL*LGFHGHKSSYQKLP Trigger: TGGAAGCTTCTGATAAGAGGATTTGTGGCCATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTTAAGGAAGTGAGACCCTTCCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | CCATGTGCTGAGGAAGGGTCTCACTTCCTTAAGCTGCCTACTGCATaGCTATGGCTGGGTTTTCATGGCCACAAATCCTCTTATCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: PCAEEGSHFLKLPTA*LWLGFHGHKSSYQK Trigger: CTTCTGATAAGAGGATTTGTGGCCATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTTAAGGAAGTGAGACCCTTCCTCAGCACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CCA 90 bp | AGGAAGGGTCTCACTTCCTTAAGCTGCCTACTGCATGGCTATGGCTaGGTTTTCATGGCCACAAATCCTCTTATCAGAAGCTTCCACCAA | + |
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Preference number: 1 (lower is better) Translates to: RKGLTSLSCLLHGYG*VFMATNPLIRSFHQ Trigger: TTGGTGGAAGCTTCTGATAAGAGGATTTGTGGCCATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTTAAGGAAGTGAGACCCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | ACCACCCCACCTCCTCCCAGAAGGGCAGTGTCCCATAGAAACAGACCTCAGCCCGCTGGTGTGAGCAGTTaGGTGCCCACCTCTTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TTPPPPRRAVSHRNRPQPAGVSS*VPTSWD Trigger: ATCCCAAGAGGTGGGCACCCAACTGCTCACACCAGC...GGGCTGAGGTCTGTTTCTATGGGACACTGCCCTTCTGGGAGGAGGTGGGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGCTAGGTCCTGGCCTGGTGCCATTTCCTGACTTGATGGTTGAGGGCATCAGAGCCCAGGCTGAATaGGCTGAAGGGCTGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VWLGPGLVPFPDLMVEGIRAQAE*AEGLSR Trigger: CCTGCTCAGCCCTTCAGCTCATTCAGCCTGGGCTCT...GATGCCCTCAACCATCAAGTCAGGAAATGGCACCAGGCCAGGACCTAGCCACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGGAGTTGCCTTGTAGGTGGGGAGAGGTGAAGCTCTTCAGGAGCCTGTGGGCCCTGGGTGAGCCCTaGAGTCACAGTTACCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: EQELPCRWGEVKLFRSLWALGEP*SHSYPF Trigger: GAAAGGGTAACTGTGACTGCAGGGCTCACCCAGGGC...CCACAGGCTCCTGAAGAGCTTCACCTCTCCCCACCTACAAGGCAACTCCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR TCA 90 bp | GGAACTCACTCTGAAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTCGTAGCTGCCCTGGGTaGGCCCTGCAGTCACAGTTA | + |
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Preference number: 2 (lower is better) Translates to: GTHSEDQAGLELRNPPASRSCPG*ALQSQL Trigger: TAACTGTGACTGCAGGGCTCACCCAGGGCAGCTACG...AGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTTCAGAGTGAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR TCA 90 bp | ACCACCCCACCTCCTCCCAGAAGGGCAGTGTCCCATAGAAACAGACCTCAGCCCTTCTGCTCCATGTGCTaGGGAAGGGTCTCACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: TTPPPPRRAVSHRNRPQPFCSMC*GRVSLP Trigger: AGGAAGTGAGACCCTTCCTCAGCACATGGAGCAGAA...GGGCTGAGGTCTGTTTCTATGGGACACTGCCCTTCTGGGAGGAGGTGGGGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGGTCAGTGATAAGCCAACAGCCTCCCCTGCAGCTGGTGGAGGAGGCACTCCTACTGCATGGCTATaGCTGGGTTTTCATGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: AVVSDKPTASPAAGGGGTPTAWL*LGFHGH Trigger: GTGGCCATGAAAACCCAGCCATAGCCATGCAGTAGG...AGTGCCTCCTCCACCAGCTGCAGGGGAGGCTGTTGGCTTATCACTGACCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGTTCCAGCTGGCCTGGCTCAAGAAGTATTGGGTGAGCATCTGTCTCTGTCTACAGACCTCAGCCCCTaGTCCTGGTCCACCCTACGT | + |
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Preference number: 2 (lower is better) Translates to: VVPAGLAQEVLGEHLSLSTDLSP*SWSTLR Trigger: ACGTAGGGTGGACCAGGACCAGGGGCTGAGGTCTGT...AGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | ATAGACTCTGCTGCAGGAATCCCAGGTTGTAGCAGCAGAAAGGCTCAGGGATGTAGCCTCCCCTGCAGCTaGTGGAGGAGGCACTTGACA | + |
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Preference number: 2 (lower is better) Translates to: IDSAAGIPGCSSRKAQGCSLPCS*WRRHLT Trigger: TGTCAAGTGCCTCCTCCACCAGCTGCAGGGGAGGCT...ACATCCCTGAGCCTTTCTGCTGCTACAACCTGGGATTCCTGCAGCAGAGTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | ACCACCCCACCTCCTCCCAGAAGGGCAGTGTCCCATAGAAACAGACCTCAGCCCACTTCACTCAGCTTCTaGAGAGAGCTAGGGAAGATG | + |
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Preference number: 2 (lower is better) Translates to: TTPPPPRRAVSHRNRPQPTSLSF*RELGKM Trigger: CATCTTCCCTAGCTCTCTCCAGAAGCTGAGTGAAGT...GGGCTGAGGTCTGTTTCTATGGGACACTGCCCTTCTGGGAGGAGGTGGGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAAATCTGACAGAGCACTGAGACCACCCCACCTCCTCCCAGAAGGGCAGTGTTGGCCCCAGGCACTCTaGGTTTCTATTTTAAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: PKSDRALRPPHLLPEGQCWPQAL*VSILKL Trigger: GAGCTTTAAAATAGAAACCCAGAGTGCCTGGGGCCA...ACACTGCCCTTCTGGGAGGAGGTGGGGTGGTCTCAGTGCTCTGTCAGATTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGAAAGGCTCAGGGATGTGCAAGCTTCTTAGTTCACCCCAGGTGCTACAGTTACCCTTTCTCCTaGCCCCAGGCACTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: SSRKAQGCASFLVHPRCYSYPFS*PQALWV Trigger: AACCCAGAGTGCCTGGGGCCAGGAGAAAGGGTAACT...GTAGCACCTGGGGTGAACTAAGAAGCTTGCACATCCCTGAGCCTTTCTGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGAAAGGCTCAGGGATGTGCAAGCTTCTTAGTTCACCCCAGGTGCTACGAGTTGCCTTGTAGGTaGGGAGAGGTGAAGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSRKAQGCASFLVHPRCYELPCR*GEVKLF Trigger: GAAGAGCTTCACCTCTCCCCACCTACAAGGCAACTC...GTAGCACCTGGGGTGAACTAAGAAGCTTGCACATCCCTGAGCCTTTCTGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | GTATGGATGAACCAGAAGGAGCCTGAACAAAGGGATTCTTGTCACCATAGAGGCCTCCCCTGCAGCTGGTaGAGGAGGCACTTGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: VWMNQKEPEQRDSCHHRGLPCSW*RRHLTE Trigger: CTCTGTCAAGTGCCTCCTCCACCAGCTGCAGGGGAG...GCCTCTATGGTGACAAGAATCCCTTTGTTCAGGCTCCTTCTGGTTCATCCATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGTTCCAGCTGGCCTGGCTCAAGAAGTATTGGGTGAGCATCTGTCTCTGTCTGAGCCACACAGGCTGTaGTCAGTGATAAGCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: VVPAGLAQEVLGEHLSLSEPHRL*SVISQQ Trigger: CTGTTGGCTTATCACTGACCACAGCCTGTGTGGCTC...AGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCGCTAAAAAGCTTAAAAACACCTGCAGATGCCTTCGTCCAGTTTGCACGCACTGGAACTCACTCTaGAGACCAGGCTGGCCTCGA | + |
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Preference number: 2 (lower is better) Translates to: RAAKKLKNTCRCLRPVCTHWNSL*RPGWPR Trigger: TCGAGGCCAGCCTGGTCTTCAGAGTGAGTTCCAGTG...CGTGCAAACTGGACGAAGGCATCTGCAGGTGTTTTTAAGCTTTTTAGCGGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR GCA 90 bp | GTGGTTCCAGCTGGCCTGGCTCAAGAAGTATTGGGTGAGCATCTGTCTCTGTCTAAATCCACCTGCCTCTaGCTCCCAAGTGCTGGAATT | + |
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Preference number: 2 (lower is better) Translates to: VVPAGLAQEVLGEHLSLSKSTCL*LPSAGI Trigger: AATTCCAGCACTTGGGAGGCAGAGGCAGGTGGATTT...AGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR GCA 90 bp | ATAGACTCTGCTGCAGGAATCCCAGGTTGTAGCAGCAGAAAGGCTCAGGGATGTCTTGACAGAGTAGCCTaGTGGTGTGAGCAGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: IDSAAGIPGCSSRKAQGCLDRVA*WCEQLG Trigger: ACCCAACTGCTCACACCAGCAGGCTACTCTGTCAAG...ACATCCCTGAGCCTTTCTGCTGCTACAACCTGGGATTCCTGCAGCAGAGTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR GCA 90 bp | ATAGACTCTGCTGCAGGAATCCCAGGTTGTAGCAGCAGAAAGGCTCAGGGATGTTTAGTTCACCCCAGGTaGTACTCTCCTGGGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: IDSAAGIPGCSSRKAQGCLVHPR*YSPGTQ Trigger: CTGAGTCCCAGGAGAGTAGCACCTGGGGTGAACTAA...ACATCCCTGAGCCTTTCTGCTGCTACAACCTGGGATTCCTGCAGCAGAGTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGTTCCAGCTGGCCTGGCTCAAGAAGTATTGGGTGAGCATCTGTCTCTGTCTATTTCAACTGCTTCCTaGCTCAGAGCCACACAGGCT | + |
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Preference number: 2 (lower is better) Translates to: VVPAGLAQEVLGEHLSLSISTAS*LRATQA Trigger: AGCCTGTGTGGCTCTGAGCCAGGAAGCAGTTGAAAT...AGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTAAGCTGCCTACTGCATGGCTATGGCTGGGTTTTCATGGCCACAAATCCGAGATCAGGAAGGGATaGGTACCTGTGGTCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: FLKLPTAWLWLGFHGHKSEIRKG*VPVVSQ Trigger: CTGTGAGACCACAGGTACTCATCCCTTCCTGATCTC...GGATTTGTGGCCATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTTAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGTTCCAGCTGGCCTGGCTCAAGAAGTATTGGGTGAGCATCTGTCTCTGTCTCGACCCTTAGACAAATaGAGATCAGGAAGGGATGAG | + |
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Preference number: 2 (lower is better) Translates to: VVPAGLAQEVLGEHLSLSRPLDK*RSGRDE Trigger: CTCATCCCTTCCTGATCTCCATTTGTCTAAGGGTCG...AGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGTTCCAGCTGGCCTGGCTCAAGAAGTATTGGGTGAGCATCTGTCTCTGTCTCTGCATGGCTATGGCTaGGTTTTCATGGCCACAAAT | + |
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Preference number: 2 (lower is better) Translates to: VVPAGLAQEVLGEHLSLSLHGYG*VFMATN Trigger: ATTTGTGGCCATGAAAACCCAGCCATAGCCATGCAG...AGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CAA 90 bp | ATGATGTGGCTTTCTGTGGTTCCAGCTGGCCTGGCTCAAGAAGTATaGGGTGAGCATCTGTCTCTGTCTCCTTGTCTGGACAGAGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: MMWLSVVPAGLAQEV*GEHLSLSPCLDRED Trigger: ATCTTCTCTGTCCAGACAAGGAGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCACAGAAAGCCACATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR-3UTR CCA 90 bp | GGAATCCCAGGTTGTAGCAGCAGAAAGGCTCAGGGATGTGCAAGCTTCTTAGTTAAGCTGCCTACTGCATaGCTATGGCTGGGTTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GIPGCSSRKAQGCASFLVKLPTA*LWLGFH Trigger: ATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTT...AACTAAGAAGCTTGCACATCCCTGAGCCTTTCTGCTGCTACAACCTGGGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR-3UTR TCA 90 bp | GAGACAATAGTACCACACTTCAATGGTCCACAAACATTCATTTCACAAGAGCCGCCCATCTCCCTAATGTaGCCACTCTCCCTGTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ETIVPHFNGPQTFISQEPPISLM*PLSLSS Trigger: AGAGGACAGGGAGAGTGGTCACATTAGGGAGATGGG...CGGCTCTTGTGAAATGAATGTTTGTGGACCATTGAAGTGTGGTACTATTGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCCGCTAAAAAGCTTAAAAACACCTGCAGATGCCTTCGTCCAGTTTGCACGTTTGTTCTCAAGAGATaGCCCTCCCCCACAATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: RAAKKLKNTCRCLRPVCTFVLKR*PSPTMC Trigger: ACACATTGTGGGGGAGGGGCATCTCTTGAGAACAAA...CGTGCAAACTGGACGAAGGCATCTGCAGGTGTTTTTAAGCTTTTTAGCGGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR-3UTR CCA 90 bp | GAGACAATAGTACCACACTTCAATGGTCCACAAACATTCATTTCACAAGAGCCGTGGGTGCCCACCTCTTaGGATTCCCAGGAGCCATTT | + |
|
Preference number: 2 (lower is better) Translates to: ETIVPHFNGPQTFISQEPWVPTS*DSQEPF Trigger: AAATGGCTCCTGGGAATCCCAAGAGGTGGGCACCCA...CGGCTCTTGTGAAATGAATGTTTGTGGACCATTGAAGTGTGGTACTATTGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR-3UTR GCA 90 bp | GAGACAATAGTACCACACTTCAATGGTCCACAAACATTCATTTCACAAGAGCCGTGTGGTCTCACAGGATaGAGGCCACTGGATATCACT | + |
|
Preference number: 2 (lower is better) Translates to: ETIVPHFNGPQTFISQEPCGLTG*RPLDIT Trigger: AGTGATATCCAGTGGCCTGCATCCTGTGAGACCACA...CGGCTCTTGTGAAATGAATGTTTGTGGACCATTGAAGTGTGGTACTATTGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR-3UTR CCA 90 bp | GTATGGATGAACCAGAAGGAGCCTGAACAAAGGGATTCTTGTCACCATAGAGGCATGGCTGGGTTTTCATaGCCACAAATCCTCTTATCA | + |
|
Preference number: 2 (lower is better) Translates to: VWMNQKEPEQRDSCHHRGMAGFS*PQILLS Trigger: TGATAAGAGGATTTGTGGCCATGAAAACCCAGCCAT...GCCTCTATGGTGACAAGAATCCCTTTGTTCAGGCTCCTTCTGGTTCATCCATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR-3UTR GCA 90 bp | GAGACAATAGTACCACACTTCAATGGTCCACAAACATTCATTTCACAAGAGCCGTCCACCAAGAGTAGTTaGTCCCCCTTAGCTCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: ETIVPHFNGPQTFISQEPSTKSS*SPLALV Trigger: AACAAGAGCTAAGGGGGAGCAACTACTCTTGGTGGA...CGGCTCTTGTGAAATGAATGTTTGTGGACCATTGAAGTGTGGTACTATTGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR GCA 72 bp | CAGACCTCAGCCCCTGGTCCTGGTCCACCCTACGTGTaGCTCAGGGACTCTCCACCCCTGGGCTTCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QTSAPGPGPPYV*LRDSPPLGFSG Trigger: TCCTGAGAAGCCCAGGGGTGGAGAGTCCCTGAGGCACACGTAGGGTGGACCAGGACCAGGGGCTGAGGTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR GCA 72 bp | TCTCCTCCACTTCCCGTAGCTGCCCTGGGTGAGCCCTaGAGTCACAGTTACCCTTTCTCCTGGCCCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPPLPVAALGEP*SHSYPFSWPQA Trigger: TGCCTGGGGCCAGGAGAAAGGGTAACTGTGACTGCAGGGCTCACCCAGGGCAGCTACGGGAAGTGGAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR TCA 72 bp | ATCCCTGTCTCCTCCACTTCCCGTAGCTGCCCTGGGTaGGCCCTGCAGTCACAGTTACCCTTTCTCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: IPVSSTSRSCPG*ALQSQLPFLLA Trigger: GGCCAGGAGAAAGGGTAACTGTGACTGCAGGGCTCACCCAGGGCAGCTACGGGAAGTGGAGGAGACAGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR GCA 72 bp | CTGCAGCTGGTGGAGGAGGCACTTGACAGAGTAGCCTaGTGGTGTGAGCAGTTGGGTGCCCACCTCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LQLVEEALDRVA*WCEQLGAHLLG Trigger: TCCCAAGAGGTGGGCACCCAACTGCTCACACCAGCAGGCTACTCTGTCAAGTGCCTCCTCCACCAGCTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | CAGTGTCCCATAGAAACAGACCTCAGCCCCTGGTCCTaGTCCACCCTACGTGTGCCTCAGGGACTCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: QCPIETDLSPWS*STLRVPQGLST Trigger: GGTGGAGAGTCCCTGAGGCACACGTAGGGTGGACCAGGACCAGGGGCTGAGGTCTGTTTCTATGGGACACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | GAAGGGCAGTGTCCCATAGAAACAGACCTCAGCCCCTaGTCCTGGTCCACCCTACGTGTGCCTCAGGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: EGQCPIETDLSP*SWSTLRVPQGL Trigger: GAGTCCCTGAGGCACACGTAGGGTGGACCAGGACCAGGGGCTGAGGTCTGTTTCTATGGGACACTGCCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR TCA 72 bp | GTGGGGAGAGGTGAAGCTCTTCAGGAGCCTGTGGTCTaGCCCTTGCTCAGGGCTAGAGTTCCCATCCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VGRGEALQEPVV*PLLRARVPIPV Trigger: GACAGGGATGGGAACTCTAGCCCTGAGCAAGGGTCAGACCACAGGCTCCTGAAGAGCTTCACCTCTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR TCA 72 bp | GGGCTGAGCAGGAGTTGCCTTGTAGGTGGGGAGAGGTaGAGCTCTTCAGGAGCCTGTGGTCTGACCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GLSRSCLVGGER*SSSGACGLTLA Trigger: AGCAAGGGTCAGACCACAGGCTCCTGAAGAGCTTCACCTCTCCCCACCTACAAGGCAACTCCTGCTCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | CAGCTGGTGGAGGAGGCACTTGACAGAGTAGCCTGCTaGTGTGAGCAGTTGGGTGCCCACCTCTTGGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: QLVEEALDRVAC*CEQLGAHLLGF Trigger: GAATCCCAAGAGGTGGGCACCCAACTGCTCACACCAGCAGGCTACTCTGTCAAGTGCCTCCTCCACCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR TCA 72 bp | TGTGTCCCCAGGGAGCTATGGTGTCAGGCTAAAGGCTaGCTCATGGTCCTGTCTTCCAGCAAAGGCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CVPRELWCQAKG*LMVLSSSKGWP Trigger: GGGCCAGCCTTTGCTGGAAGACAGGACCATGAGTCAGCCTTTAGCCTGACACCATAGCTCCCTGGGGACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR TCA 72 bp | GAAGCATCCAGAGGCCTGGGATGCTTCTCTGACAGATaGCATCAGGCCAGAGCTCTCTGTGTCCCCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EASRGLGCFSDR*HQARALCVPRE Trigger: CTCCCTGGGGACACAGAGAGCTCTGGCCTGATGTCATCTGTCAGAGAAGCATCCCAGGCCTCTGGATGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR TCA 72 bp | CTTCATGTCTGTCCCAGCAGGAGAGCCCAGGCTGAATaGGCTGAAGGGCTGAGCAGGAGTTGCCTTGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHVCPSRRAQAE*AEGLSRSCLVG Trigger: ACCTACAAGGCAACTCCTGCTCAGCCCTTCAGCTCATTCAGCCTGGGCTCTCCTGCTGGGACAGACATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR GCA 72 bp | CCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATaGGCCACCACCGCCCGGCTTGTCTGTCATTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PASASQVLELKA*ATTARLVCHSF Trigger: AAAAGAATGACAGACAAGCCGGGCGGTGGTGGCGCATGCCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | TTTCAACTGCTTCCTGGCTCAGAGCCACACAGGCTGTaGTCAGTGATAAGCCAACAGCCTCCCCTGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FQLLPGSEPHRL*SVISQQPPLQL Trigger: CAGCTGCAGGGGAGGCTGTTGGCTTATCACTGACCACAGCCTGTGTGGCTCTGAGCCAGGAAGCAGTTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | TCCAATCTCAGTCCAGCAGGGCTGGAGCTGATAGTGTaGCTAGGTCCTGGCCTGGTGCCATTTCCTGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SNLSPAGLELIV*LGPGLVPFPDL Trigger: CAAGTCAGGAAATGGCACCAGGCCAGGACCTAGCCACACTATCAGCTCCAGCCCTGCTGGACTGAGATTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR GCA 72 bp | GATCAGGAAGGGATGAGTACCTGTGGTCTCACAGGATaGAGGCCACTGGATATCACTGTCACCCTCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DQEGMSTCGLTG*RPLDITVTLCP Trigger: TGGGCAGAGGGTGACAGTGATATCCAGTGGCCTGCATCCTGTGAGACCACAGGTACTCATCCCTTCCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCGCCACCACCGCCCGGCTTGTCTGTCATTCTTTTAACTTAGAGACTTCATGTAGGGCTGAGCAGGAGTaGCCTTGTAGGTGGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CATTARLVCHSFNLETSCRAEQE*PCRWGE Trigger: CTCTCCCCACCTACAAGGCAACTCCTGCTCAGCCCT...ACATGAAGTCTCTAAGTTAAAAGAATGACAGACAAGCCGGGCGGTGGTGGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGGAGGCTCCCTCCCTCTGACCTTAGCATTTCAACTGCTTCCTGGCTCAGACCACCACCGCCCGGCTaGTCTGTCATTCTTTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: ARRLPPSDLSISTASWLRPPPPG*SVILLT Trigger: AGTTAAAAGAATGACAGACAAGCCGGGCGGTGGTGG...TCTGAGCCAGGAAGCAGTTGAAATGCTAAGGTCAGAGGGAGGGAGCCTCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR TCA 72 bp | CTGTCGACCCTTAGACAAATGGAGATCAGGAAGGGATaGGTACCTGTGGTCTCACAGGATGCAGGCCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSTLRQMEIRKG*VPVVSQDAGHW Trigger: CCAGTGGCCTGCATCCTGTGAGACCACAGGTACTCATCCCTTCCTGATCTCCATTTGTCTAAGGGTCGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR GCA 72 bp | CTCCATGTGCTGAGGAAGGGTCTCACTTCCTTAAGCTaGCTACTGCATGGCTATGGCTGGGTTTTCATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LHVLRKGLTSLS*LLHGYGWVFMA Trigger: GGCCATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTTAAGGAAGTGAGACCCTTCCTCAGCACATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR GCA 72 bp | GCTCAGGGATGTGCAAGCTTCTTAGTTCACCCCAGGTaGTACTCTCCTGGGACTCAGATACGCCTGAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AQGCASFLVHPR*YSPGTQIRLKG Trigger: ACCTTTCAGGCGTATCTGAGTCCCAGGAGAGTAGCACCTGGGGTGAACTAAGAAGCTTGCACATCCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | CTCCCTCCCTCTGACCTTAGCATTTCAACTGCTTCCTaGCTCAGAGCCACACAGGCTGTGGTCAGTGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPPSDLSISTAS*LRATQAVVSDK Trigger: CTTATCACTGACCACAGCCTGTGTGGCTCTGAGCCAGGAAGCAGTTGAAATGCTAAGGTCAGAGGGAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCCGCTAAAAAGCTTAAAAACACCTGCAGATGCCTTCGTCCAGTTTGCACGTGCTGGTGTGAGCAGTaGGGTGCCCACCTCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RAAKKLKNTCRCLRPVCTCWCEQ*GAHLLG Trigger: TCCCAAGAGGTGGGCACCCAACTGCTCACACCAGCA...CGTGCAAACTGGACGAAGGCATCTGCAGGTGTTTTTAAGCTTTTTAGCGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR GCA 72 bp | ACAAGAGCCGCTAAAAAGCTTAAAAACACCTGCAGATaGCTTCGTCCAGTTTGCACGCACGGGTGCACGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TRAAKKLKNTCR*LRPVCTHGCTL Trigger: CAGCGTGCACCCGTGCGTGCAAACTGGACGAAGGCATCTGCAGGTGTTTTTAAGCTTTTTAGCGGCTCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR GCA 72 bp | GGATGTGTCATATCAGGGGCTGAGATGCTACGGTCCTaGTACAGTGTATGGATGAACCAGAAGGAGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GCVISGAEMLRS*YSVWMNQKEPE Trigger: TTCAGGCTCCTTCTGGTTCATCCATACACTGTAGCAGGACCGTAGCATCTCAGCCCCTGATATGACACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR GCA 72 bp | GCATCTGTCTCTGTCTCCTTGTCTGGACAGAGAAGATaGTTAGAAGCATCCAGAGGCCTGGGATGCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASVSVSLSGQRR*LEASRGLGCFS Trigger: AGAGAAGCATCCCAGGCCTCTGGATGCTTCTAAGCATCTTCTCTGTCCAGACAAGGAGACAGAGACAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | GAGGAAGGGTCTCACTTCCTTAAGCTGCCTACTGCATaGCTATGGCTGGGTTTTCATGGCCACAAATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EEGSHFLKLPTA*LWLGFHGHKSS Trigger: AGAGGATTTGTGGCCATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTTAAGGAAGTGAGACCCTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | AAGTTTGTAGTCATAGAGGAAGCCAAGACGGGACCGTaGTTTCCTAAATCAGGCAGGCAGCTAGCTGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KFVVIEEAKTGP*FPKSGRQLAVA Trigger: AGCCACAGCTAGCTGCCTGCCTGATTTAGGAAACCACGGTCCCGTCTTGGCTTCCTCTATGACTACAAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | TTTCTGTGGTTCCAGCTGGCCTGGCTCAAGAAGTATTaGGTGAGCATCTGTCTCTGTCTCCTTGTCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: FLWFQLAWLKKY*VSICLCLLVWT Trigger: TGTCCAGACAAGGAGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCACAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR TCA 72 bp | GAGGCACGAGGAAACTTTTTCTGCCGCTGCTTGCTCTaGTCTGAAGTTTGTAGTCATAGAGGAAGCCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EARGNFFCRCLL*SEVCSHRGSQD Trigger: GTCTTGGCTTCCTCTATGACTACAAACTTCAGATCAGAGCAAGCAGCGGCAGAAAAAGTTTCCTCGTGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | TTAGACAAATGGAGATCAGGAAGGGATGAGTACCTGTaGTCTCACAGGATGCAGGCCACTGGATATCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LDKWRSGRDEYL*SHRMQATGYHC Trigger: ACAGTGATATCCAGTGGCCTGCATCCTGTGAGACCACAGGTACTCATCCCTTCCTGATCTCCATTTGTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | CTCACTTCCTTAAGCTGCCTACTGCATGGCTATGGCTaGGTTTTCATGGCCACAAATCCTCTTATCAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTSLSCLLHGYG*VFMATNPLIRS Trigger: GCTTCTGATAAGAGGATTTGTGGCCATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTTAAGGAAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | TGCAAGCTTCTTAGTTCACCCCAGGTGCTACTCTCCTaGGACTCAGATACGCCTGAAAGGTCTTGTCTAATT | + |
|
Preference number: 3 (lower is better) Translates to: CKLLSSPQVLLS*DSDTPERSCLI Trigger: AATTAGACAAGACCTTTCAGGCGTATCTGAGTCCCAGGAGAGTAGCACCTGGGGTGAACTAAGAAGCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CCA 72 bp | AAGTATTGGGTGAGCATCTGTCTCTGTCTCCTTGTCTaGACAGAGAAGATGCTTAGAAGCATCCAGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KYWVSICLCLLV*TEKMLRSIQRP Trigger: AGGCCTCTGGATGCTTCTAAGCATCTTCTCTGTCCAGACAAGGAGACAGAGACAGATGCTCACCCAATACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| CDS-3UTR TCA 90 bp | GCTGTGGTCAGTGATAAGCCAACAGCCTCCCCTGCAGCTGGTGGAGGAGGCACTGGGTGGCAGCACCCTTaGGGCAGAAGCCTTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVVSDKPTASPAAGGGGTGWQHP*GRSLGG Trigger: TCCGCCAAGGCTTCTGCCTCAAGGGTGCTGCCACCC...AGTGCCTCCTCCACCAGCTGCAGGGGAGGCTGTTGGCTTATCACTGACCACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| CDS-3UTR TCA 90 bp | GCTGTGGTCAGTGATAAGCCAACAGCCTCCCCTGCAGCTGGTGGAGGAGGCACTGTGGCCAGTCCAAGGTaGGAGGTGGCATTGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVVSDKPTASPAAGGGGTVASPR*EVALEL Trigger: CAACTCCAATGCCACCTCTCACCTTGGACTGGCCAC...AGTGCCTCCTCCACCAGCTGCAGGGGAGGCTGTTGGCTTATCACTGACCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| CDS-3UTR GCA 90 bp | GAGGCCACCCCAAGGAGGAGGACAAAGAAGTGTTCAGTACCAGTGGGGACTCAACTCTGGCCACCAGGATaGCCGCCTCCAGCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EATPRRRTKKCSVPVGTQLWPPG*PPPAAG Trigger: TCCTGCTGCTGGAGGCGGGCATCCTGGTGGCCAGAG...TTGAGTCCCCACTGGTACTGAACACTTCTTTGTCCTCCTCCTTGGGGTGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| CDS-3UTR TCA 90 bp | CTTGACAGAGTAGCCTGCTGGTGTGAGCAGTTGGGTGCCCACCTCTTGGGATTCTCACCAGCCCTAGGCTaGGGAAGAGGCCATCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDRVACWCEQLGAHLLGFSPALG*GRGHLG Trigger: TCCCAGATGGCCTCTTCCTCAGCCTAGGGCTGGTGA...GAATCCCAAGAGGTGGGCACCCAACTGCTCACACCAGCAGGCTACTCTGTCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTTAGCATTTCAACTGCTTCCTGGCTCAGAGCCACACAGGCTGTGGTCAGCTGGGCAATGCCCTaGGCGTGCTGGCACGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDLSISTASWLRATQAVVSWAMP*ACWHAL Trigger: GAGAGCGTGCCAGCACGCTCAGGGCATTGCCCAGCT...GACCACAGCCTGTGTGGCTCTGAGCCAGGAAGCAGTTGAAATGCTAAGGTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| CDS-3UTR GCA 90 bp | ATAGACTCTGCTGCAGGAATCCCAGGTTGTAGCAGCAGAAAGGCTCAGGGATGTTGTGGAGCTGGGCAATaGCCTGAGCGTGCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: IDSAAGIPGCSSRKAQGCCGAGQ*PERAGT Trigger: CGTGCCAGCACGCTCAGGGCATTGCCCAGCTCCACA...ACATCCCTGAGCCTTTCTGCTGCTACAACCTGGGATTCCTGCAGCAGAGTCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| CDS-3UTR CCA 90 bp | GTGTGGCTAGGTCCTGGCCTGGTGCCATTTCCTGACTTGATGGTTGAGGGCATCAAGGCTCTGACTGGTTaGTGGCCAGTCCAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VWLGPGLVPFPDLMVEGIKALTG*WPVQGE Trigger: CTCACCTTGGACTGGCCACCAACCAGTCAGAGCCTT...GATGCCCTCAACCATCAAGTCAGGAAATGGCACCAGGCCAGGACCTAGCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| CDS-3UTR CCA 90 bp | GTGGTTCCAGCTGGCCTGGCTCAAGAAGTATTGGGTGAGCATCTGTCTCTGTCTAGATGCAGCTGCAGGTaGGGTGCTGAGGGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVPAGLAQEVLGEHLSLSRCSCR*GAEGRG Trigger: TCCTCTGCCCTCAGCACCCCACCTGCAGCTGCATCT...AGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
||
| 3UTR CAA 72 bp | GTGTGGCTAGGTCCTGGCCTGGTGCCATTTCCTGACTaGATGGTTGAGGGCATCTCACTCCAGACTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWLGPGLVPFPD*MVEGISLQTER Trigger: CCTCTCAGTCTGGAGTGAGATGCCCTCAACCATCAAGTCAGGAAATGGCACCAGGCCAGGACCTAGCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR TCA 90 bp | GAGCAGGAGTTGCCTTGTAGGTGGGGAGAGGTGAAGCTCTTCAGGAGCCTGTGGGGTTGCGGTTTTTGGTaGTGGCTATCACAACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EQELPCRWGEVKLFRSLWGCGFW*WLSQPA Trigger: TGCTGGTTGTGATAGCCATCACCAAAAACCGCAACC...CCACAGGCTCCTGAAGAGCTTCACCTCTCCCCACCTACAAGGCAACTCCTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR TCA 90 bp | GAGGCCACCCCAAGGAGGAGGACAAAGAAGTGTTCAGTACCAGTGGGGACTCAAGGGCCAGGCAGCAGATaGAGTAATACATGGGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: EATPRRRTKKCSVPVGTQGPGSR*SNTWAS Trigger: ACTCGCCCATGTATTACTTCATCTGCTGCCTGGCCC...TTGAGTCCCCACTGGTACTGAACACTTCTTTGTCCTCCTCCTTGGGGTGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR CCA 90 bp | TTCCTTAAGCTGCCTACTGCATGGCTATGGCTGGGTTTTCATGGCCACAAATCCGCACCAAAGCCACTCTaGCCACCAGGATGCCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: FLKLPTAWLWLGFHGHKSAPKPL*PPGCPP Trigger: AGGCGGGCATCCTGGTGGCCAGAGTGGCTTTGGTGC...GGATTTGTGGCCATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTTAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR CCA 90 bp | GAGGCCACCCCAAGGAGGAGGACAAAGAAGTGTTCAGTACCAGTGGGGACTCAAGAGGAAGAGGCCATCTaGGATGGACACATACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: EATPRRRTKKCSVPVGTQEEEAI*DGHIQA Trigger: TGCCTGTATGTGTCCATCCCAGATGGCCTCTTCCTC...TTGAGTCCCCACTGGTACTGAACACTTCTTTGTCCTCCTCCTTGGGGTGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR TCA 90 bp | GTGGTTCCAGCTGGCCTGGCTCAAGAAGTATTGGGTGAGCATCTGTCTCTGTCTTCTCCAGCACGATGCTaGCACTTACCATCAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VVPAGLAQEVLGEHLSLSSPARC*HLPSGQ Trigger: CTGACCTGATGGTAAGTGTCAGCATCGTGCTGGAGA...AGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR TCA 90 bp | TTCCTTAAGCTGCCTACTGCATGGCTATGGCTGGGTTTTCATGGCCACAAATCCACAGCAGCACCTCCTTaGGTGTCATGCGGAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FLKLPTAWLWLGFHGHKSTAAPP*VSCGAP Trigger: AGGAGCTCCGCATGACACTCAAGGAGGTGCTGCTGT...GGATTTGTGGCCATGAAAACCCAGCCATAGCCATGCAGTAGGCAGCTTAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| 3UTR CAA 72 bp | CTTTCTGTGGTTCCAGCTGGCCTGGCTCAAGAAGTATaGGGTGAGCATCTGTCTCTGTCTCCTTGTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSVVPAGLAQEV*GEHLSLSPCLD Trigger: GTCCAGACAAGGAGACAGAGACAGATGCTCACCCAATACTTCTTGAGCCAGGCCAGCTGGAACCACAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR TCA 90 bp | GTATGGATGAACCAGAAGGAGCCTGAACAAAGGGATTCTTGTCACCATAGAGGCGAGGGCAGAGGACGATaGGCAAGAGATGCAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: VWMNQKEPEQRDSCHHRGEGRGR*ARDAGR Trigger: TCTTCCTGCATCTCTTGCTCATCGTCCTCTGCCCTC...GCCTCTATGGTGACAAGAATCCCTTTGTTCAGGCTCCTTCTGGTTCATCCATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR CCA 90 bp | GAGACAATAGTACCACACTTCAATGGTCCACAAACATTCATTTCACAAGAGCCGCAGCCCGTCGTGCTCTaGGCAGCGTCACGATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ETIVPHFNGPQTFISQEPQPVVL*AASRCC Trigger: ACAGCATCGTGACGCTGCCCAGAGCACGACGGGCTG...CGGCTCTTGTGAAATGAATGTTTGTGGACCATTGAAGTGTGGTACTATTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR CCA 90 bp | GGAATCCCAGGTTGTAGCAGCAGAAAGGCTCAGGGATGTGCAAGCTTCTTAGTTGCTCTCGTGAACATGTaGGCATACAGAATCGCCATG | + |
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Preference number: 4 (lower is better) Translates to: GIPGCSSRKAQGCASFLVALVNM*AYRIAM Trigger: CATGGCGATTCTGTATGCCCACATGTTCACGAGAGC...AACTAAGAAGCTTGCACATCCCTGAGCCTTTCTGCTGCTACAACCTGGGATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS TCA 90 bp | CCTTGGCGGATGGACCGCCGCCTTTTGTGGAGCTGGGCAATGCCCTaGGCGTGCTGGCACGCTCTCGTGAACATGTGGGCATACAGAATC | + |
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Preference number: 5 (lower is better) Translates to: PWRMDRRLLWSWAMP*ACWHALVNMWAYRI Trigger: GATTCTGTATGCCCACATGTTCACGAGAGCGTGCCAGCACGCTCAGGGCATTGCCCAGCTCCACAAAAGGCGGCGGTCCATCCGCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR CAA 90 bp | GAGGCCACCCCAAGGAGGAGGACAAAGAAGTGTTCAGTACCAGTGGGGACTCAAAGGGTGGCAGCACCCTaGAGGCAGAAGCCTTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: EATPRRRTKKCSVPVGTQRVAAP*RQKPWR Trigger: CCGCCAAGGCTTCTGCCTCAAGGGTGCTGCCACCCT...TTGAGTCCCCACTGGTACTGAACACTTCTTTGTCCTCCTCCTTGGGGTGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGCTATGGTGTCAGGCTAAAGGCTGACTCATGGTCCTGTCTTCCAGCAAGCACGTCAATGAGGTaGTCCAGCTGCTGCACCAAA | + |
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Preference number: 5 (lower is better) Translates to: PGSYGVRLKADSWSCLPASTSMR*SSCCTK Trigger: TTTGGTGCAGCAGCTGGACAACCTCATTGACGTGCT...TGCTGGAAGACAGGACCATGAGTCAGCCTTTAGCCTGACACCATAGCTCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR CAA 90 bp | GTATGGATGAACCAGAAGGAGCCTGAACAAAGGGATTCTTGTCACCATAGAGGCCACAGCAGCACCTCCTaGAGTGTCATGCGGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VWMNQKEPEQRDSCHHRGHSSTS*SVMRSS Trigger: GGAGCTCCGCATGACACTCAAGGAGGTGCTGCTGTG...GCCTCTATGGTGACAAGAATCCCTTTGTTCAGGCTCCTTCTGGTTCATCCATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR CAA 90 bp | GGAATCCCAGGTTGTAGCAGCAGAAAGGCTCAGGGATGTGCAAGCTTCTTAGTTGAGGTGGCATTGGAGTaGAGAGAACCCAGAAGACTC | + |
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Preference number: 5 (lower is better) Translates to: GIPGCSSRKAQGCASFLVEVALE*REPRRL Trigger: GAGTCTTCTGGGTTCTCTCAACTCCAATGCCACCTC...AACTAAGAAGCTTGCACATCCCTGAGCCTTTCTGCTGCTACAACCTGGGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR CAA 90 bp | AGCAGCAGAAAGGCTCAGGGATGTGCAAGCTTCTTAGTTCACCCCAGGTGCTACAGGAGGAGGAAGAGGTaGAAGTTCTTGAAGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: SSRKAQGCASFLVHPRCYRRRKR*KFLKMQ Trigger: CTGCATCTTCAAGAACTTCAACCTCTTCCTCCTCCT...GTAGCACCTGGGGTGAACTAAGAAGCTTGCACATCCCTGAGCCTTTCTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS-3UTR CAA 90 bp | TGCGCCACCACCGCCCGGCTTGTCTGTCATTCTTTTAACTTAGAGACTTCATGTAAGAGGTTGAAGTTCTaGAAGATGCAGCTGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: CATTARLVCHSFNLETSCKRLKF*KMQLQV Trigger: CACCTGCAGCTGCATCTTCAAGAACTTCAACCTCTT...ACATGAAGTCTCTAAGTTAAAAGAATGACAGACAAGCCGGGCGGTGGTGGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS CAA 90 bp | CCCCAGAAGGATAGTAAGGGTGGCAGCACCCTTGAGGCAGAAGCCTaGGCGGATGGACCGCCGCCTTTTGTGGAGCTGGGCAATGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PQKDSKGGSTLEAEA*ADGPPPFVELGNAL Trigger: CAGGGCATTGCCCAGCTCCACAAAAGGCGGCGGTCCATCCGCCAAGGCTTCTGCCTCAAGGGTGCTGCCACCCTTACTATCCTTCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS TCA 72 bp | ATGGACCGCCGCCTTTTGTGGAGCTGGGCAATGCCCTaGGCGTGCTGGCACGCTCTCGTGAACATGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: MDRRLLWSWAMP*ACWHALVNMWA Trigger: TGCCCACATGTTCACGAGAGCGTGCCAGCACGCTCAGGGCATTGCCCAGCTCCACAAAAGGCGGCGGTCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS GCA 72 bp | CCACAGATGAGCACGTCAATGAGGTTGTCCAGCTGCTaGACCAAAGCCACTCTGGCCACCAGGATGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: PQMSTSMRLSSC*TKATLATRMPA Trigger: GGCGGGCATCCTGGTGGCCAGAGTGGCTTTGGTGCAGCAGCTGGACAACCTCATTGACGTGCTCATCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS CCA 72 bp | ATAGTAAGGGTGGCAGCACCCTTGAGGCAGAAGCCTTaGCGGATGGACCGCCGCCTTTTGTGGAGCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: IVRVAAPLRQKP*RMDRRLLWSWA Trigger: TGCCCAGCTCCACAAAAGGCGGCGGTCCATCCGCCAAGGCTTCTGCCTCAAGGGTGCTGCCACCCTTACTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS GCA 72 bp | GAGCCACAGATGAGCACGTCAATGAGGTTGTCCAGCTaGTGCACCAAAGCCACTCTGGCCACCAGGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: EPQMSTSMRLSS*CTKATLATRMP Trigger: GGGCATCCTGGTGGCCAGAGTGGCTTTGGTGCAGCAGCTGGACAACCTCATTGACGTGCTCATCTGTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS CAA 90 bp | CAGAGACTGGACACCATGGAGCCACAGATGAGCACGTCAATGAGGTaGTCCAGCTGCTGCACCAAAGCCACTCTGGCCACCAGGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: QRLDTMEPQMSTSMR*SSCCTKATLATRMP Trigger: GGGCATCCTGGTGGCCAGAGTGGCTTTGGTGCAGCAGCTGGACAACCTCATTGACGTGCTCATCTGTGGCTCCATGGTGTCCAGTCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS GCA 72 bp | CCACGACAGCCCGTCGTGCTCTGGGCAGCGTCACGATaGTGTGATAACGCAGCGCATAGAAGATGGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: PRQPVVLWAASR*CDNAAHRRWRC Trigger: ACATCTCCATCTTCTATGCGCTGCGTTATCACAGCATCGTGACGCTGCCCAGAGCACGACGGGCTGTCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS CAA 72 bp | GACACCATGGAGCCACAGATGAGCACGTCAATGAGGTaGTCCAGCTGCTGCACCAAAGCCACTCTGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: DTMEPQMSTSMR*SSCCTKATLAT Trigger: GGTGGCCAGAGTGGCTTTGGTGCAGCAGCTGGACAACCTCATTGACGTGCTCATCTGTGGCTCCATGGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS CAA 72 bp | AAAATCCCCAGAAGGATAGTAAGGGTGGCAGCACCCTaGAGGCAGAAGCCTTGGCGGATGGACCGCCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: KIPRRIVRVAAP*RQKPWRMDRRL Trigger: AAGGCGGCGGTCCATCCGCCAAGGCTTCTGCCTCAAGGGTGCTGCCACCCTTACTATCCTTCTGGGGATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS TCA 72 bp | TGGTGGCCAGTCCAAGGTGAGAGGTGGCATTGGAGTTaGGAGAACCCAGAAGACTCTTCTGGGGCTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: WWPVQGERWHWS*ENPEDSSGAPE Trigger: CTCAGGAGCCCCAGAAGAGTCTTCTGGGTTCTCTCAACTCCAATGCCACCTCTCACCTTGGACTGGCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS CCA 72 bp | GGATGGACACATACAGGCACCAAGGCTCTGACTGGTTaGTGGCCAGTCCAAGGTGAGAGGTGGCATTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: GWTHTGTKALTG*WPVQGERWHWS Trigger: ACTCCAATGCCACCTCTCACCTTGGACTGGCCACCAACCAGTCAGAGCCTTGGTGCCTGTATGTGTCCATCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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| CDS TCA 72 bp | CACCAAGGCTCTGACTGGTTGGTGGCCAGTCCAAGGTaGGAGGTGGCATTGGAGTTGAGAGAACCCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: HQGSDWLVASPR*EVALELREPRR Trigger: TCTTCTGGGTTCTCTCAACTCCAATGCCACCTCTCACCTTGGACTGGCCACCAACCAGTCAGAGCCTTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098324.4 |
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