Pregenerated sensors for MBTPS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046873Ensembl transcript IDs: ENSMUST00000058098.15, ENSMUST00000112522.9, ENSMUST00000149249.2, ENSMUST00000179062.8
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGAGATTCCCTTCATAGGGGCTGAGCTCACCTTGACCATTCTCTaGCGCCAGAAAGCCCGTAAAAGAGGCAGTGGTCGGCTGGAGATA | + |
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Preference number: 1 (lower is better) Translates to: TEIPFIGAELTLTIL*RQKARKRGSGRLEI Trigger: TATCTCCAGCCGACCACTGCCTCTTTTACGGGCTTTCTGGCGGCAGAGAATGGTCAAGGTGAGCTCAGCCCCTATGAAGGGAATCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR CCA 90 bp | CTCAGGCTGCTGCCCACAAGCGGCTGCAGAGCAATAACAGGAGAGTaGTATTGGCTACCATGCGCCCAATCGACACCTACATCTCCATAT | + |
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Preference number: 1 (lower is better) Translates to: LRLLPTSGCRAITGE*YWLPCAQSTPTSPY Trigger: ATATGGAGATGTAGGTGTCGATTGGGCGCATGGTAGCCAATACCACTCTCCTGTTATTGCTCTGCAGCCGCTTGTGGGCAGCAGCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR CCA 90 bp | GCTGGTTTCCAGAGAAACCGCCTCGATATCACCGATATTATCCGGTaGCAGCAGCTCCACAAAATCAGCAGGAATCTCTGCGCTTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: AGFQRNRLDITDIIR*QQLHKISRNLCAFC Trigger: ACAGAAAGCGCAGAGATTCCTGCTGATTTTGTGGAGCTGCTGCCACCGGATAATATCGGTGATATCGAGGCGGTTTCTCTGGAAACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR GCA 90 bp | ATCACCATCATTCATTCAAGCACATTAAGCAATTCTGATAGCGCATaGACTACACAGGGAAGCCAGGAGCCCACAGGGAAGCGGAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: ITIIHSSTLSNSDSA*TTQGSQEPTGKRKR Trigger: TCTCTTCCGCTTCCCTGTGGGCTCCTGGCTTCCCTGTGTAGTGCATGCGCTATCAGAATTGCTTAATGTGCTTGAATGAATGATGGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR CCA 90 bp | TCACGATCCTTATGCCTAGCCCTCCAAACACATAGAGGCAGGTGCTaGGATTATAGGTGTGCACCAGCACATCACCTTAATGGCACTTTT | + |
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Preference number: 1 (lower is better) Translates to: SRSLCLALQTHRGRC*DYRCAPAHHLNGTF Trigger: AAAAGTGCCATTAAGGTGATGTGCTGGTGCACACCTATAATCCCAGCACCTGCCTCTATGTGTTTGGAGGGCTAGGCATAAGGATCGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR GCA 90 bp | GATATTATCCGGTGGCAGCAGCTCCACAAAATCAGCAGGAATCTCTaGGCTTTCTGTGTTAAGACACAGAAGTTTCTCTGTCTCAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: DIIRWQQLHKISRNL*AFCVKTQKFLCLRG Trigger: GCCTCTGAGACAGAGAAACTTCTGTGTCTTAACACAGAAAGCGCAGAGATTCCTGCTGATTTTGTGGAGCTGCTGCCACCGGATAATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR CCA 90 bp | GTGCATGTATGCATGCACGAAAGGGTCTTGCTATGTGGCCAGTGCTaGTCTGGAACCTACTATGTAGCTAAAGATGATGGCCTTGAATTC | + |
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Preference number: 1 (lower is better) Translates to: VHVCMHERVLLCGQC*SGTYYVAKDDGLEF Trigger: GAATTCAAGGCCATCATCTTTAGCTACATAGTAGGTTCCAGACCAGCACTGGCCACATAGCAAGACCCTTTCGTGCATGCATACATGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR GCA 90 bp | CTAGGTGCTGGTGACGACAGAGTATGGCTCAAGGTTGAATGTTCTTaGAGCACAAAGGAAAAAGTCTACTCTGGAAGAGTTCTAAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LGAGDDRVWLKVECS*STKEKVYSGRVLSC Trigger: GCAGCTTAGAACTCTTCCAGAGTAGACTTTTTCCTTTGTGCTGCAAGAACATTCAACCTTGAGCCATACTCTGTCGTCACCAGCACCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR GCA 90 bp | AGCAGAATTATCTTTGAACATCTTCTCGCAGCCTTTATGAGAGCATaGTATAGGTCTTGGAAAGTCTCCTTTTGGCTTTTTGGGTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: SRIIFEHLLAAFMRA*YRSWKVSFWLFGSH Trigger: ATGAGACCCAAAAAGCCAAAAGGAGACTTTCCAAGACCTATAGCATGCTCTCATAAAGGCTGCGAGAAGATGTTCAAAGATAATTCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR CCA 90 bp | TTTGAACATCTTCTCGCAGCCTTTATGAGAGCATGCTATAGGTCTTaGAAAGTCTCCTTTTGGCTTTTTGGGTCTCATGCTAGTAAATTC | + |
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Preference number: 1 (lower is better) Translates to: FEHLLAAFMRACYRS*KVSFWLFGSHASKF Trigger: GAATTTACTAGCATGAGACCCAAAAAGCCAAAAGGAGACTTTCCAAGACCTATAGCATGCTCTCATAAAGGCTGCGAGAAGATGTTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR TCA 90 bp | TTTCTCATAGCAGAATTATCTTTGAACATCTTCTCGCAGCCTTTATaGGAGCATGCTATAGGTCTTGGAAAGTCTCCTTTTGGCTTTTTG | + |
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Preference number: 1 (lower is better) Translates to: FLIAELSLNIFSQPL*EHAIGLGKSPFGFL Trigger: CAAAAAGCCAAAAGGAGACTTTCCAAGACCTATAGCATGCTCTCATAAAGGCTGCGAGAAGATGTTCAAAGATAATTCTGCTATGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR CCA 90 bp | GTAAAATACTTCCCAGGCTTCAAAGGGACTCTCACTTCTTTTTACTaGTCATTCTTGTTCTTAACATGGGTTAAGATATGCGATTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: VKYFPGFKGTLTSFY*SFLFLTWVKICDFR Trigger: CCTGAAATCGCATATCTTAACCCATGTTAAGAACAAGAATGACCAGTAAAAAGAAGTGAGAGTCCCTTTGAAGCCTGGGAAGTATTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR TCA 90 bp | AGTACCTTACTTCAGGAGGGAGGTATATATCTGGCTATTAATGAATaGATGGATGGATCATTGCCTTTTGTTACCTCTAATGTGTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: STLLQEGGIYLAINE*MDGSLPFVTSNVCV Trigger: AACACACACATTAGAGGTAACAAAAGGCAATGATCCATCCATTCATTCATTAATAGCCAGATATATACCTCCCTCCTGAAGTAAGGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR CCA 90 bp | CCTTACTTCAGGAGGGAGGTATATATCTGGCTATTAATGAATGAATaGATGGATCATTGCCTTTTGTTACCTCTAATGTGTGTGTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: PYFRREVYIWLLMNE*MDHCLLLPLMCVFH Trigger: ATGAAACACACACATTAGAGGTAACAAAAGGCAATGATCCATCCATTCATTCATTAATAGCCAGATATATACCTCCCTCCTGAAGTAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR CCA 90 bp | TCAATTAAAGGAGTTATTGGAACAAATCTGTGTGCCACCAGTATGTaGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACAT | + |
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Preference number: 1 (lower is better) Translates to: SIKGVIGTNLCATSM*MFNKYQGHNDRKLH Trigger: ATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCCACATACTGGTGGCACACAGATTTGTTCCAATAACTCCTTTAATTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGAGAAGCACCCAAACCCGACCCTAAAGATTAGCTGGCAGAGGTGTTCAAAGGGTCTTGCTATGTaGCCAGTGCTGGTCTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PGEKHPNPTLKISWQRCSKGLAM*PVLVWN Trigger: GTTCCAGACCAGCACTGGCCACATAGCAAGACCCTT...TGAACACCTCTGCCAGCTAATCTTTAGGGTCGGGTTTGGGTGCTTCTCTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGAGAAGCACCCAAACCCGACCCTAAAGATTAGCTGGCAGAGGTGTTCATTGCTATGTGGCCAGTaGTGGTCTGGAACCTACTAT | + |
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Preference number: 2 (lower is better) Translates to: PGEKHPNPTLKISWQRCSLLCGQ*WSGTYY Trigger: ATAGTAGGTTCCAGACCAGCACTGGCCACATAGCAA...TGAACACCTCTGCCAGCTAATCTTTAGGGTCGGGTTTGGGTGCTTCTCTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGAGAAGCACCCAAACCCGACCCTAAAGATTAGCTGGCAGAGGTGTTCAGCATGTGTGAGGTCCTaGGCTAAGTACCATACCAAA | + |
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Preference number: 2 (lower is better) Translates to: PGEKHPNPTLKISWQRCSACVRS*AKYHTK Trigger: TTTGGTATGGTACTTAGCCCAGGACCTCACACATGC...TGAACACCTCTGCCAGCTAATCTTTAGGGTCGGGTTTGGGTGCTTCTCTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR GCA 90 bp | CACGCTTTCTTCTGCACCGGCCTCTATAAAGGTCGTCAAACCACAGAGATTCCCATCAGCAGGAATCTCTaGGCTTTCTGTGTTAAGACA | + |
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Preference number: 2 (lower is better) Translates to: HAFFCTGLYKGRQTTEIPISRNL*AFCVKT Trigger: TGTCTTAACACAGAAAGCGCAGAGATTCCTGCTGAT...GGGAATCTCTGTGGTTTGACGACCTTTATAGAGGCCGGTGCAGAAGAAAGCGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCCACCAGTATGTGGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCGTGTGTGCGCGCCTGTaGATGTATGCATGCACGAAA | + |
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Preference number: 2 (lower is better) Translates to: VPPVCGCSINTKDTMTESVCARL*MYACTK Trigger: TTTCGTGCATGCATACATGCACAGGCGCGCACACAC...GCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCCACATACTGGTGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR CCA 90 bp | GTGCCACCAGTATGTGGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCCATAGAGGCAGGTGCTaGGATTATAGGTGTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: VPPVCGCSINTKDTMTESHRGRC*DYRCAP Trigger: TGGTGCACACCTATAATCCCAGCACCTGCCTCTATG...GCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCCACATACTGGTGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCTGCACCGGCCTCTATAAAGGTCGTCAAACCACAGAGATTCCCTTCATAACTGGCAAAACCATCTaGCTTCCAAATTCAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: FFCTGLYKGRQTTEIPFITGKTI*LPNSGL Trigger: CAGTCCTGAATTTGGAAGCCAGATGGTTTTGCCAGT...TATGAAGGGAATCTCTGTGGTTTGACGACCTTTATAGAGGCCGGTGCAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR-3UTR TCA 90 bp | TTTAGTAATGAGGCCATTTGCATACAAATCTGGACTCCAGGAGAGAAGCACCCATCTCTAAGCTTTACCTaGAAAGGTCTGTGCCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: FSNEAICIQIWTPGEKHPSLSFT*KGLCLF Trigger: AAAAAGGCACAGACCTTTTCAGGTAAAGCTTAGAGA...TGGGTGCTTCTCTCCTGGAGTCCAGATTTGTATGCAAATGGCCTCATTACTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR GCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGACACATAGAGGCAGGTaGTGGGATTATAGGTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: GCSINTKDTMTESYITRKTHRGR*WDYRCA Trigger: TGCACACCTATAATCCCAGCACCTGCCTCTATGTGT...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTAATGAGGCCATTTGCATACAAATCTGGACTCCAGGAGAGAAGCACCCAAAAACCAAGAGCACTTaGTCTACTTTCCATTCAACC | + |
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Preference number: 2 (lower is better) Translates to: FSNEAICIQIWTPGEKHPKTKST*STFHST Trigger: GGTTGAATGGAAAGTAGAGCAAGTGCTCTTGGTTTT...TGGGTGCTTCTCTCCTGGAGTCCAGATTTGTATGCAAATGGCCTCATTACTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR CAA 90 bp | GGAATTATGCTTTTCATTTCTTCTACTCCCTCTACTACAGAGTTTTaGGGTTCTCTAGATATTAGGAGCTCAAAGAGGTTGGCCAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GIMLFISSTPSTTEF*GSLDIRSSKRLAKV Trigger: CACCTTGGCCAACCTCTTTGAGCTCCTAATATCTAGAGAACCCAAAAACTCTGTAGTAGAGGGAGTAGAAGAAATGAAAAGCATAATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR GCA 90 bp | TTCCTAGAAACTATTCAAACTAGGGGCATATTTATTCTCAGGCACATTACTGTAACCTTGACCATTCTCTaGCGCCAGAAAGCCCGTAAA | + |
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Preference number: 2 (lower is better) Translates to: FLETIQTRGIFILRHITVTLTIL*RQKARK Trigger: TTTACGGGCTTTCTGGCGGCAGAGAATGGTCAAGGT...TACAGTAATGTGCCTGAGAATAAATATGCCCCTAGTTTGAATAGTTTCTAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR-3UTR TCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGAGTATGGCTCAAGGTTaGATGTTCTTGCAGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: GCSINTKDTMTESYITRKSMAQG*MFLQHK Trigger: TTTGTGCTGCAAGAACATTCAACCTTGAGCCATACT...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR GCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGAATTCACGATCCTTATaGCTAGCCCTCCAAACACAT | + |
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Preference number: 2 (lower is better) Translates to: GCSINTKDTMTESYITRKNSRSL*LALQTH Trigger: ATGTGTTTGGAGGGCTAGGCATAAGGATCGTGAATT...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR CCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCGTCGTCTTCATTAACTaGCAAAACCATCTGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SQQKYGAHELSLLLKPNFVVFIN*QNHLAS Trigger: GGAAGCCAGATGGTTTTGCCAGTTAATGAAGACGAC...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR-3UTR TCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGGATACATTTTGGTCCTaGGTGATCTTAGAAGACAAC | + |
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Preference number: 2 (lower is better) Translates to: GCSINTKDTMTESYITRKDTFWS*VILEDN Trigger: GTTGTCTTCTAAGATCACTCAGGACCAAAATGTATC...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR GCA 90 bp | GTGCCACCAGTATGTGGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCCTTGTACAGAGTTTTTaGTTTCATGTTAGCAGATAC | + |
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Preference number: 2 (lower is better) Translates to: VPPVCGCSINTKDTMTESLVQSF*FHVSRY Trigger: GTATCTGCTAACATGAAAGCAAAAACTCTGTACAAG...GCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCCACATACTGGTGGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR CCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGGGAAAAAGTCTACTCTaGAAGAGTTCTAAGCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: GCSINTKDTMTESYITRKGKSLL*KSSKLQ Trigger: TTGCAGCTTAGAACTCTTCCAGAGTAGACTTTTTCC...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR-3UTR CCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCTGGAAAGTCTCCTTTTaGCTTTTTGGGTCTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: SQQKYGAHELSLLLKPNFWKVSF*LFGSHA Trigger: AGCATGAGACCCAAAAAGCCAAAAGGAGACTTTCCA...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCTAGAAACTATTCAAACTAGGGGCATATTTATTCTCAGGCACATTACTGTATTCCAAATTCAGGACTaGATAGTAGGTTGTCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: FLETIQTRGIFILRHITVFQIQD*IVGCLS Trigger: ACTCAGACAACCTACTATTCAGTCCTGAATTTGGAA...TACAGTAATGTGCCTGAGAATAAATATGCCCCTAGTTTGAATAGTTTCTAGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR GCA 72 bp | CCCTTCATAGGGGCTGAGCTCACCTTGACCATTCTCTaGCGCCAGAAAGCCCGTAAAAGAGGCAGTGGTCGG | + |
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Preference number: 3 (lower is better) Translates to: PFIGAELTLTIL*RQKARKRGSGR Trigger: CCGACCACTGCCTCTTTTACGGGCTTTCTGGCGGCAGAGAATGGTCAAGGTGAGCTCAGCCCCTATGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR GCA 72 bp | GCGCGCCTGTGCATGTATGCATGCACGAAAGGGTCTTaGTATGTGGCCAGTGCTGGTCTGGAACCTACTATG | + |
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Preference number: 3 (lower is better) Translates to: ARLCMYACTKGS*YVASAGLEPTM Trigger: CATAGTAGGTTCCAGACCAGCACTGGCCACATAGCAAGACCCTTTCGTGCATGCATACATGCACAGGCGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR CCA 72 bp | CTGCCCACAAGCGGCTGCAGAGCAATAACAGGAGAGTaGTATTGGCTACCATGCGCCCAATCGACACCTACA | + |
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Preference number: 3 (lower is better) Translates to: LPTSGCRAITGE*YWLPCAQSTPT Trigger: TGTAGGTGTCGATTGGGCGCATGGTAGCCAATACCACTCTCCTGTTATTGCTCTGCAGCCGCTTGTGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR TCA 72 bp | AGGTCGTCAAACCACAGAGATTCCCTTCATAGGGGCTaGGCTCACCTTGACCATTCTCTGCCGCCAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: RSSNHRDSLHRG*AHLDHSLPPES Trigger: GCTTTCTGGCGGCAGAGAATGGTCAAGGTGAGCTCAGCCCCTATGAAGGGAATCTCTGTGGTTTGACGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR CCA 72 bp | ACAAGCGGCTGCAGAGCAATAACAGGAGAGTGGTATTaGCTACCATGCGCCCAATCGACACCTACATCTCCA | + |
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Preference number: 3 (lower is better) Translates to: TSGCRAITGEWY*LPCAQSTPTSP Trigger: TGGAGATGTAGGTGTCGATTGGGCGCATGGTAGCCAATACCACTCTCCTGTTATTGCTCTGCAGCCGCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR GCA 72 bp | TCCTTATGCCTAGCCCTCCAAACACATAGAGGCAGGTaGTGGGATTATAGGTGTGCACCAGCACATCACCTT | + |
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Preference number: 3 (lower is better) Translates to: SLCLALQTHRGR*WDYRCAPAHHL Trigger: AAGGTGATGTGCTGGTGCACACCTATAATCCCAGCACCTGCCTCTATGTGTTTGGAGGGCTAGGCATAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR CCA 72 bp | CAGAGAAACCGCCTCGATATCACCGATATTATCCGGTaGCAGCAGCTCCACAAAATCAGCAGGAATCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: QRNRLDITDIIR*QQLHKISRNLC Trigger: GCAGAGATTCCTGCTGATTTTGTGGAGCTGCTGCCACCGGATAATATCGGTGATATCGAGGCGGTTTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR-3UTR CAA 90 bp | TTTAGTAATGAGGCCATTTGCATACAAATCTGGACTCCAGGAGAGAAGCACCCAATGCACGAAAGGGTCTaGCTATGTGGCCAGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: FSNEAICIQIWTPGEKHPMHERV*LCGQCW Trigger: CCAGCACTGGCCACATAGCAAGACCCTTTCGTGCAT...TGGGTGCTTCTCTCCTGGAGTCCAGATTTGTATGCAAATGGCCTCATTACTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR GCA 72 bp | ATTCATTCAAGCACATTAAGCAATTCTGATAGCGCATaGACTACACAGGGAAGCCAGGAGCCCACAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: IHSSTLSNSDSA*TTQGSQEPTGK Trigger: CTTCCCTGTGGGCTCCTGGCTTCCCTGTGTAGTGCATGCGCTATCAGAATTGCTTAATGTGCTTGAATGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR GCA 72 bp | CGGTGGCAGCAGCTCCACAAAATCAGCAGGAATCTCTaGGCTTTCTGTGTTAAGACACAGAAGTTTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: RWQQLHKISRNL*AFCVKTQKFLC Trigger: ACAGAGAAACTTCTGTGTCTTAACACAGAAAGCGCAGAGATTCCTGCTGATTTTGTGGAGCTGCTGCCACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| 3UTR CCA 72 bp | TTATGCCTAGCCCTCCAAACACATAGAGGCAGGTGCTaGGATTATAGGTGTGCACCAGCACATCACCTTAAT | + |
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Preference number: 3 (lower is better) Translates to: LCLALQTHRGRC*DYRCAPAHHLN Trigger: ATTAAGGTGATGTGCTGGTGCACACCTATAATCCCAGCACCTGCCTCTATGTGTTTGGAGGGCTAGGCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| 3UTR CCA 72 bp | GGCAGTGGTCGGCTGGAGATAGTCGTCTTCATTAACTaGCAAAACCATCTGGCTTCCAAATTCAGGACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GSGRLEIVVFIN*QNHLASKFRTE Trigger: TTCAGTCCTGAATTTGGAAGCCAGATGGTTTTGCCAGTTAATGAAGACGACTATCTCCAGCCGACCACTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| 3UTR GCA 72 bp | GTATGCATGCACGAAAGGGTCTTGCTATGTGGCCAGTaGTGGTCTGGAACCTACTATGTAGCTAAAGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: VCMHERVLLCGQ*WSGTYYVAKDD Trigger: ATCATCTTTAGCTACATAGTAGGTTCCAGACCAGCACTGGCCACATAGCAAGACCCTTTCGTGCATGCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR GCA 72 bp | CAGCCAGCTGACTTTCTCAATTTCCCAGGCTTGAACTaGTACCCTACAAGACCAATTGTGATTCTTTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: QPADFLNFPGLN*YPTRPIVILYS Trigger: GCTGTAAAGAATCACAATTGGTCTTGTAGGGTAGCAGTTCAAGCCTGGGAAATTGAGAAAGTCAGCTGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR CCA 72 bp | GAGAGAAACATACTAGGTGCTGGTGACGACAGAGTATaGCTCAAGGTTGAATGTTCTTGCAGCACAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ERNILGAGDDRV*LKVECSCSTKE Trigger: TTCCTTTGTGCTGCAAGAACATTCAACCTTGAGCCATACTCTGTCGTCACCAGCACCTAGTATGTTTCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR GCA 72 bp | GGTGACGACAGAGTATGGCTCAAGGTTGAATGTTCTTaGAGCACAAAGGAAAAAGTCTACTCTGGAAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GDDRVWLKVECS*STKEKVYSGRV Trigger: AACTCTTCCAGAGTAGACTTTTTCCTTTGTGCTGCAAGAACATTCAACCTTGAGCCATACTCTGTCGTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR CCA 72 bp | TTAGTGGTAGAATACTTGCTCGCATGTGTGAGGTCCTaGGCTAAGTACCATACCAAAAATTGTTTTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LVVEYLLACVRS*AKYHTKNCFPQ Trigger: CTGAGGAAAACAATTTTTGGTATGGTACTTAGCCCAGGACCTCACACATGCGAGCAAGTATTCTACCACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACATACTAGGTGCTGGTGACGACAGAGTATGGCTCAAGGTTGAATGTTCTCAATGGCAACAGATATaGCCATGTAGCTTTACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RNILGAGDDRVWLKVECSQWQQI*PCSFTS Trigger: AGAAGTAAAGCTACATGGCAATATCTGTTGCCATTG...AGAACATTCAACCTTGAGCCATACTCTGTCGTCACCAGCACCTAGTATGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR TCA 72 bp | AGGAAGTGGTTAAGTAGGTTTGCTGAAGTTCTGTTGTaGTCTGTTAGAGGACTCAGCTTAGTTCTCAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RKWLSRFAEVLL*SVRGLSLVLKF Trigger: GAACTTGAGAACTAAGCTGAGTCCTCTAACAGATCACAACAGAACTTCAGCAAACCTACTTAACCACTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACATACTAGGTGCTGGTGACGACAGAGTATGGCTCAAGGTTGAATGTTCTCAATCATTAATGATTTaGTGTATGTGCGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RNILGAGDDRVWLKVECSQSLMI*CMCVCV Trigger: CACACACACGCACATACACAAAATCATTAATGATTG...AGAACATTCAACCTTGAGCCATACTCTGTCGTCACCAGCACCTAGTATGTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGTAATGAGGCCATTTGCATACAAATCTGGACTCCAGGAGAGAAGCACCCAACATTGCTCATTTACTaGATAGCACTTGTACAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FSNEAICIQIWTPGEKHPTLLIY*IALVQS Trigger: ACTCTGTACAAGTGCTATCAAGTAAATGAGCAATGT...TGGGTGCTTCTCTCCTGGAGTCCAGATTTGTATGCAAATGGCCTCATTACTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR-3UTR CAA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGGAGTATGGCTCAAGGTaGAATGTTCTTGCAGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: GCSINTKDTMTESYITRKEYGSR*NVLAAQ Trigger: TTGTGCTGCAAGAACATTCAACCTTGAGCCATACTC...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCACCAGTATGTGGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCATGGATCATTGCCTTTaGTTACCTCTAATGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPPVCGCSINTKDTMTESMDHCL*LPLMCV Trigger: CACACACATTAGAGGTAACAAAAGGCAATGATCCAT...GCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCCACATACTGGTGGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR TCA 72 bp | GCAGAATTATCTTTGAACATCTTCTCGCAGCCTTTATaGGAGCATGCTATAGGTCTTGGAAAGTCTCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: AELSLNIFSQPL*EHAIGLGKSPF Trigger: AAAAGGAGACTTTCCAAGACCTATAGCATGCTCTCATAAAGGCTGCGAGAAGATGTTCAAAGATAATTCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| 3UTR GCA 72 bp | ATCTTTGAACATCTTCTCGCAGCCTTTATGAGAGCATaGTATAGGTCTTGGAAAGTCTCCTTTTGGCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: IFEHLLAAFMRA*YRSWKVSFWLF Trigger: AAAAAGCCAAAAGGAGACTTTCCAAGACCTATAGCATGCTCTCATAAAGGCTGCGAGAAGATGTTCAAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| 3UTR CCA 72 bp | TTCCCAGGCTTCAAAGGGACTCTCACTTCTTTTTACTaGTCATTCTTGTTCTTAACATGGGTTAAGATATGC | + |
|
Preference number: 3 (lower is better) Translates to: FPGFKGTLTSFY*SFLFLTWVKIC Trigger: GCATATCTTAACCCATGTTAAGAACAAGAATGACCAGTAAAAAGAAGTGAGAGTCCCTTTGAAGCCTGGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| 3UTR CCA 72 bp | CTTAAGAGAACTAATGTTCTGAAAAAGGTCACCTTATaGAGTACCTTACTTCAGGAGGGAGGTATATATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LKRTNVLKKVTL*STLLQEGGIYL Trigger: CAGATATATACCTCCCTCCTGAAGTAAGGTACTCCATAAGGTGACCTTTTTCAGAACATTAGTTCTCTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCATAGCAGAATTATCTTaGAACATCTTCTCGCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SQQKYGAHELSLLLKPNFIAELS*NIFSQP Trigger: AGGCTGCGAGAAGATGTTCAAAGATAATTCTGCTAT...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| 3UTR CCA 72 bp | AGGAGGGAGGTATATATCTGGCTATTAATGAATGAATaGATGGATCATTGCCTTTTGTTACCTCTAATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RREVYIWLLMNE*MDHCLLLPLMC Trigger: ACACATTAGAGGTAACAAAAGGCAATGATCCATCCATTCATTCATTAATAGCCAGATATATACCTCCCTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCATGAAGTTCACGAAATaGTCTCTTGGTGAAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SQQKYGAHELSLLLKPNFMKFTK*SLGETK Trigger: TTTGGTTTCACCAAGAGACAATTTCGTGAACTTCAT...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112522.9 ENSMUST00000179062.8 |
||
| 3UTR TCA 72 bp | ATACGACAGGACATCTCAACAAAAATATGGGGCTCATaGATTAAGTCTCCTGTTGAAACCAAACTTCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: IRQDISTKIWGS*IKSPVETKLQK Trigger: TTTTTGAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGATGTCCTGTCGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112522.9 ENSMUST00000179062.8 |
||
| 3UTR GCA 72 bp | CACACATACATTTTCATTAGTAAACTGCTTCATGCATaGGATGAAGTTAATGTGAGTATTTCACGGCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: HTYIFISKLLHA*DEVNVSISRHS Trigger: AGAATGCCGTGAAATACTCACATTAACTTCATCGCATGCATGAAGCAGTTTACTAATGAAAATGTATGTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR CAA 72 bp | TGCGCGCCTGTGCATGTATGCATGCACGAAAGGGTCTaGCTATGTGGCCAGTGCTGGTCTGGAACCTACTAT | + |
|
Preference number: 4 (lower is better) Translates to: CAPVHVCMHERV*LCGQCWSGTYY Trigger: ATAGTAGGTTCCAGACCAGCACTGGCCACATAGCAAGACCCTTTCGTGCATGCATACATGCACAGGCGCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR CAA 72 bp | CACAAGCGGCTGCAGAGCAATAACAGGAGAGTGGTATaGGCTACCATGCGCCCAATCGACACCTACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKRLQSNNRRVV*ATMRPIDTYIS Trigger: GGAGATGTAGGTGTCGATTGGGCGCATGGTAGCCAATACCACTCTCCTGTTATTGCTCTGCAGCCGCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| 3UTR CAA 72 bp | ACCACAGAGATTCCCTTCATAGGGGCTGAGCTCACCTaGACCATTCTCTGCCGCCAGAAAGCCCGTAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTEIPFIGAELT*TILCRQKARKR Trigger: TCTTTTACGGGCTTTCTGGCGGCAGAGAATGGTCAAGGTGAGCTCAGCCCCTATGAAGGGAATCTCTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGAGAAGCACCCAAACCCGACCCTAAAGATTAGCTGGCAGAGGTGTTCAGTCCCAGTGTCACATTaGCAGCCAAAAGTACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGEKHPNPTLKISWQRCSVPVSH*QPKVHC Trigger: GCAGTGTACTTTTGGCTGCCAATGTGACACTGGGAC...TGAACACCTCTGCCAGCTAATCTTTAGGGTCGGGTTTGGGTGCTTCTCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGAGAAGCACCCAAACCCGACCCTAAAGATTAGCTGGCAGAGGTGTTCAAAAAGCACACATCTGTaGGGCTGTGATTGTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGEKHPNPTLKISWQRCSKSTHL*GCDCYS Trigger: GCTGTAACAATCACAGCCTCACAGATGTGTGCTTTT...TGAACACCTCTGCCAGCTAATCTTTAGGGTCGGGTTTGGGTGCTTCTCTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR GCA 90 bp | TATTGGCTACCATGCGCCCAATCGACACCTACATCTCCATATACTTCGATGGTTTTGGTAAAGCATCCTTaGTTTCCGCCGTCCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: YWLPCAQSTPTSPYTSMVLVKHP*FPPSPT Trigger: AGTTGGGGACGGCGGAAAGCAAGGATGCTTTACCAA...AACCATCGAAGTATATGGAGATGTAGGTGTCGATTGGGCGCATGGTAGCCAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGAGAAGCACCCAAACCCGACCCTAAAGATTAGCTGGCAGAGGTGTTCATTGTTCCCTAATAGCTaGTATACCGTGTCCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGEKHPNPTLKISWQRCSLFPNS*YTVSNF Trigger: GAAATTGGACACGGTATAGCAGCTATTAGGGAACAA...TGAACACCTCTGCCAGCTAATCTTTAGGGTCGGGTTTGGGTGCTTCTCTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGGGCCTCTGGGTCCAATaGCAGGTGAGTCCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GCSINTKDTMTESYITRKGLWVQ*QVSPLR Trigger: TCGCAGAGGACTCACCTGCCATTGGACCCAGAGGCC...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CCA 90 bp | TGCTGGTCTGGAACCTACTATGTAGCTAAAGATGATGGCCTTGAATTCACGATCCCACAAAAAGGCCTCTaGGTCCAATGGCAGGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CWSGTYYVAKDDGLEFTIPQKGL*VQWQVS Trigger: ACTCACCTGCCATTGGACCCAGAGGCCTTTTTGTGG...GATCGTGAATTCAAGGCCATCATCTTTAGCTACATAGTAGGTTCCAGACCAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGAGAAGCACCCAAACCCGACCCTAAAGATTAGCTGGCAGAGGTGTTCAATACAATACCCAATTTaGGGCTCATATGCAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGEKHPNPTLKISWQRCSIQYPI*GSYAMV Trigger: CACCATTGCATATGAGCCCCAAATTGGGTATTGTAT...TGAACACCTCTGCCAGCTAATCTTTAGGGTCGGGTTTGGGTGCTTCTCTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR TCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCGGGCTGAGCTCACCTTaGCCATTCTCTGCCGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQQKYGAHELSLLLKPNFGLSSP*PFSAAR Trigger: TCTGGCGGCAGAGAATGGTCAAGGTGAGCTCAGCCC...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGAGAAGCACCCAAACCCGACCCTAAAGATTAGCTGGCAGAGGTGTTCACATTCATTCCAATCTTaGACATTAGTAACGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PGEKHPNPTLKISWQRCSHSFQS*TLVTGQ Trigger: TTGTCCCGTTACTAATGTGCAAGATTGGAATGAATG...TGAACACCTCTGCCAGCTAATCTTTAGGGTCGGGTTTGGGTGCTTCTCTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR TCA 90 bp | CACGCTTTCTTCTGCACCGGCCTCTATAAAGGTCGTCAAACCACAGAGATTCCCGTTTGCCATCTTATATaGAAAGGAGAGATGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HAFFCTGLYKGRQTTEIPVCHLI*KGEMLN Trigger: ATTGAGCATCTCTCCTTTTCATATAAGATGGCAAAC...GGGAATCTCTGTGGTTTGACGACCTTTATAGAGGCCGGTGCAGAAGAAAGCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR TCA 90 bp | TTTAGTAATGAGGCCATTTGCATACAAATCTGGACTCCAGGAGAGAAGCACCCAGTTGCAAATGGGTGGTaGACAGATCAACAAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSNEAICIQIWTPGEKHPVANGW*TDQQMP Trigger: GGGCATTTGTTGATCTGTTCACCACCCATTTGCAAC...TGGGTGCTTCTCTCCTGGAGTCCAGATTTGTATGCAAATGGCCTCATTACTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR GCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCTACTACTCAGGCTGCTaGCCACAAGCGGCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQQKYGAHELSLLLKPNFYYSGC*PQAAAE Trigger: CTCTGCAGCCGCTTGTGGGCAGCAGCCTGAGTAGTA...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGTATTGGCTACCATGCGCCCAATCGACACCTACATCTCCATATACTTCAGTAAGTCAGCTGATTaGCAGGTAAATTTATACCGG | + |
|
Preference number: 4 (lower is better) Translates to: RVVLATMRPIDTYISIYFSKSAD*QVNLYR Trigger: CCGGTATAAATTTACCTGTCAATCAGCTGACTTACT...GAAGTATATGGAGATGTAGGTGTCGATTGGGCGCATGGTAGCCAATACCACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR GCA 90 bp | CACGCTTTCTTCTGCACCGGCCTCTATAAAGGTCGTCAAACCACAGAGATTCCCGAACAGATCAACAAATaGCCCAGGATAAATAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HAFFCTGLYKGRQTTEIPEQINK*PRINNE Trigger: TTCATTATTTATCCTGGGGCATTTGTTGATCTGTTC...GGGAATCTCTGTGGTTTGACGACCTTTATAGAGGCCGGTGCAGAAGAAAGCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| 3UTR CAA 72 bp | TCACATCAGCCAGCTGACTTTCTCAATTTCCCAGGCTaGAACTGCTACCCTACAAGACCAATTGTGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHQPADFLNFPG*NCYPTRPIVIL Trigger: AAGAATCACAATTGGTCTTGTAGGGTAGCAGTTCAAGCCTGGGAAATTGAGAAAGTCAGCTGGCTGATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR TCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGGGACAATCCTGTAGATaGGTGACAAGGTCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GCSINTKDTMTESYITRKGQSCR*VTRSPT Trigger: TGTGGGAGACCTTGTCACTCATCTACAGGATTGTCC...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR TCA 90 bp | TGCTGGTCTGGAACCTACTATGTAGCTAAAGATGATGGCCTTGAATTCACGATCACATCTGTGAGGCTGTaGTTGTTACAGCATTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CWSGTYYVAKDDGLEFTITSVRL*LLQHSV Trigger: TACTGAATGCTGTAACAATCACAGCCTCACAGATGT...GATCGTGAATTCAAGGCCATCATCTTTAGCTACATAGTAGGTTCCAGACCAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR TCA 90 bp | TGCTGGTCTGGAACCTACTATGTAGCTAAAGATGATGGCCTTGAATTCACGATCGAGTTTAAAATCCATTaGCCATCCAAGGCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CWSGTYYVAKDDGLEFTIEFKIH*PSKAKQ Trigger: CTGCTTTGCCTTGGATGGTCAATGGATTTTAAACTC...GATCGTGAATTCAAGGCCATCATCTTTAGCTACATAGTAGGTTCCAGACCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR TCA 90 bp | AGAAACATACTAGGTGCTGGTGACGACAGAGTATGGCTCAAGGTTGAATGTTCTATTGTCTCCAATTACTaGAGTAAGGGTAGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNILGAGDDRVWLKVECSIVSNY*SKGSIQ Trigger: CTGGATGCTACCCTTACTTCAGTAATTGGAGACAAT...AGAACATTCAACCTTGAGCCATACTCTGTCGTCACCAGCACCTAGTATGTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR GCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGTTGGTAAAGCATCCTTaGTTTCCGCCGTCCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GCSINTKDTMTESYITRKLVKHP*FPPSPT Trigger: AGTTGGGGACGGCGGAAAGCAAGGATGCTTTACCAA...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCTGCACTCTCGGCCCATaGATGTGCAAGTGCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQQKYGAHELSLLLKPNFCTLGP*MCKCFL Trigger: GAGAAAGCACTTGCACATCCATGGGCCGAGAGTGCA...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGGGCAGTTTTTAAATAGTGGGACAATGAACAGTGTCATCAGTGAATCAGTCAGCCATCATTTGTaGCAAAGTCTGCATCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGQFLNSGTMNSVISESVSHHL*QSLHQC Trigger: ACACTGATGCAGACTTTGGCACAAATGATGGCTGAC...TGATTCACTGATGACACTGTTCATTGTCCCACTATTTAAAAACTGCCCTGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR GCA 90 bp | TTTAGTAATGAGGCCATTTGCATACAAATCTGGACTCCAGGAGAGAAGCACCCAACTGGTGATATAAGTTaGAAATGGGTGGTGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSNEAICIQIWTPGEKHPTGDIS*KWVVNR Trigger: TCTGTTCACCACCCATTTGCAACTTATATCACCAGT...TGGGTGCTTCTCTCCTGGAGTCCAGATTTGTATGCAAATGGCCTCATTACTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR GCA 90 bp | TTTAGTAATGAGGCCATTTGCATACAAATCTGGACTCCAGGAGAGAAGCACCCAAACTTGCGCCGCTTTTaGAATCTTTATTGCTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSNEAICIQIWTPGEKHPNLRRF*NLYCFY Trigger: GTAGAAGCAATAAAGATTGCAAAAGCGGCGCAAGTT...TGGGTGCTTCTCTCCTGGAGTCCAGATTTGTATGCAAATGGCCTCATTACTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR GCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCACCTTGACCATTCTCTaGCGCCAGAAAGCCCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQQKYGAHELSLLLKPNFTLTIL*RQKARK Trigger: TTTACGGGCTTTCTGGCGGCAGAGAATGGTCAAGGT...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR CCA 90 bp | GTGCCACCAGTATGTGGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCGGGGCTCATATGCAATaGTGTCTAAACATTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPPVCGCSINTKDTMTESGAHMQ*CLNIHS Trigger: GGAATGAATGTTTAGACACCATTGCATATGAGCCCC...GCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCCACATACTGGTGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR CAA 72 bp | CATGCTATAGGTCTTGGAAAGTCTCCTTTTGGCTTTTaGGGTCTCATGCTAGTAAATTCTGCCAGTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HAIGLGKSPFGF*GLMLVNSASCL Trigger: CAAACAACTGGCAGAATTTACTAGCATGAGACCCAAAAAGCCAAAAGGAGACTTTCCAAGACCTATAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR GCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGGTCAGCCATCATTTGTaGCAAAGTCTGCATCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GCSINTKDTMTESYITRKVSHHL*QSLHQC Trigger: ACACTGATGCAGACTTTGGCACAAATGATGGCTGAC...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGGGCAGTTTTTAAATAGTGGGACAATGAACAGTGTCATCAGTGAATCAATCAGCAGGAATCTCTaGGCTTTCTGTGTTAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SPGQFLNSGTMNSVISESISRNL*AFCVKT Trigger: TGTCTTAACACAGAAAGCGCAGAGATTCCTGCTGAT...TGATTCACTGATGACACTGTTCATTGTCCCACTATTTAAAAACTGCCCTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCTCAAGACCATCGATCTaGTTCTGCTCCCACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQQKYGAHELSLLLKPNFSRPSI*FCSHCL Trigger: CAAACAGTGGGAGCAGAAGCAGATCGATGGTCTTGA...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGGGCAGTTTTTAAATAGTGGGACAATGAACAGTGTCATCAGTGAATCAGCCTTTATGAGAGCATaGTATAGGTCTTGGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGQFLNSGTMNSVISESAFMRA*YRSWKV Trigger: GACTTTCCAAGACCTATAGCATGCTCTCATAAAGGC...TGATTCACTGATGACACTGTTCATTGTCCCACTATTTAAAAACTGCCCTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTAGAAACTATTCAAACTAGGGGCATATTTATTCTCAGGCACATTACTGTACTCGGCCCATGGATGTaGAAGTGCTTTCTCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLETIQTRGIFILRHITVLGPWM*KCFLIA Trigger: TGCTATGAGAAAGCACTTGCACATCCATGGGCCGAG...TACAGTAATGTGCCTGAGAATAAATATGCCCCTAGTTTGAATAGTTTCTAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGGGCAGTTTTTAAATAGTGGGACAATGAACAGTGTCATCAGTGAATCAGCATGCTATAGGTCTTaGAAAGTCTCCTTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGQFLNSGTMNSVISESACYRS*KVSFWL Trigger: AAGCCAAAAGGAGACTTTCCAAGACCTATAGCATGC...TGATTCACTGATGACACTGTTCATTGTCCCACTATTTAAAAACTGCCCTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCTTCTCGCAGCCTTTATaGGAGCATGCTATAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQQKYGAHELSLLLKPNFFSQPL*EHAIGL Trigger: AAGACCTATAGCATGCTCTCATAAAGGCTGCGAGAA...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR GCA 90 bp | AGAAACATACTAGGTGCTGGTGACGACAGAGTATGGCTCAAGGTTGAATGTTCTGAACAGATCAACAAATaGCCCAGGATAAATAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNILGAGDDRVWLKVECSEQINK*PRINNE Trigger: TTCATTATTTATCCTGGGGCATTTGTTGATCTGTTC...AGAACATTCAACCTTGAGCCATACTCTGTCGTCACCAGCACCTAGTATGTTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR GCA 90 bp | ATAGTCGTCTTCATTAACTGGCAAAACCATCTGGCTTCCAAATTCAGGACTGAAACTGGTGATATAAGTTaGAAATGGGTGGTGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IVVFINWQNHLASKFRTETGDIS*KWVVNR Trigger: TCTGTTCACCACCCATTTGCAACTTATATCACCAGT...TTCAGTCCTGAATTTGGAAGCCAGATGGTTTTGCCAGTTAATGAAGACGACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR CCA 90 bp | GTGCCACCAGTATGTGGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCGATATAAGTTGCAAATaGGTGGTGAACAGATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VPPVCGCSINTKDTMTESDISCK*VVNRST Trigger: TGTTGATCTGTTCACCACCCATTTGCAACTTATATC...GCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCCACATACTGGTGGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CCA 90 bp | ATAGTCGTCTTCATTAACTGGCAAAACCATCTGGCTTCCAAATTCAGGACTGAAAATATCCTTAGCTGCTaGACTGGTGATATAAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IVVFINWQNHLASKFRTENILSC*TGDISC Trigger: GCAACTTATATCACCAGTCCAGCAGCTAAGGATATT...TTCAGTCCTGAATTTGGAAGCCAGATGGTTTTGCCAGTTAATGAAGACGACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR CCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCACTGGCAAAACCATCTaGCTTCCAAATTCAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SQQKYGAHELSLLLKPNFTGKTI*LPNSGL Trigger: CAGTCCTGAATTTGGAAGCCAGATGGTTTTGCCAGT...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR TCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGTTGCTTCTACAAACTTaGGTAGCTTCAACTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCSINTKDTMTESYITRKLLLQT*VASTAF Trigger: GAAAGCAGTTGAAGCTACTCAAGTTTGTAGAAGCAA...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGAATATCCTTAGCTGCTaGACTGGTGATATAAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCSINTKDTMTESYITRKNILSC*TGDISC Trigger: GCAACTTATATCACCAGTCCAGCAGCTAAGGATATT...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR CAA 72 bp | CTTTTCATTTCTTCTACTCCCTCTACTACAGAGTTTTaGGGTTCTCTAGATATTAGGAGCTCAAAGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFISSTPSTTEF*GSLDIRSSKRL Trigger: CAACCTCTTTGAGCTCCTAATATCTAGAGAACCCAAAAACTCTGTAGTAGAGGGAGTAGAAGAAATGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR TCA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGGTTTGCCATCTTATATaGAAAGGAGAGATGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GCSINTKDTMTESYITRKVCHLI*KGEMLN Trigger: ATTGAGCATCTCTCCTTTTCATATAAGATGGCAAAC...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR TCA 90 bp | GCTTTTCATTTCTTCTACTCCCTCTACTACAGAGTTTTTGGGTTCTCTAGATATAGTAAGTCAGCTGATTaGCAGGTAAATTTATACCGG | + |
|
Preference number: 4 (lower is better) Translates to: AFHFFYSLYYRVFGFSRYSKSAD*QVNLYR Trigger: CCGGTATAAATTTACCTGTCAATCAGCTGACTTACT...ATATCTAGAGAACCCAAAAACTCTGTAGTAGAGGGAGTAGAAGAAATGAAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR TCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCTTCCAAATTCAGGACTaGATAGTAGGTTGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQQKYGAHELSLLLKPNFFQIQD*IVGCLS Trigger: ACTCAGACAACCTACTATTCAGTCCTGAATTTGGAA...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCCCATGGATGTGCAAGTaGTTTCTCATAGCAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SQQKYGAHELSLLLKPNFPWMCK*FLIAEL Trigger: TAATTCTGCTATGAGAAAGCACTTGCACATCCATGG...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGAAACTATTCAAACTAGGGGCATATTTATTCTCAGGCACATTACTGTATGGAAAGTCTCCTTTTaGCTTTTTGGGTCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLETIQTRGIFILRHITVWKVSF*LFGSHA Trigger: AGCATGAGACCCAAAAAGCCAAAAGGAGACTTTCCA...TACAGTAATGTGCCTGAGAATAAATATGCCCCTAGTTTGAATAGTTTCTAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| 3UTR CAA 72 bp | GAAAAGGTCTGTGCCTTTTTAATATGCAGATACATTTaGGTCCTGAGTGATCTTAGAAGACAACAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EKVCAFLICRYI*VLSDLRRQQCH Trigger: ATGGCATTGTTGTCTTCTAAGATCACTCAGGACCAAAATGTATCTGCATATTAAAAAGGCACAGACCTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR CAA 72 bp | TTCAAAGGGACTCTCACTTCTTTTTACTGGTCATTCTaGTTCTTAACATGGGTTAAGATATGCGATTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKGTLTSFYWSF*FLTWVKICDFR Trigger: CCTGAAATCGCATATCTTAACCCATGTTAAGAACAAGAATGACCAGTAAAAAGAAGTGAGAGTCCCTTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR TCA 90 bp | TTCCTAGAAACTATTCAAACTAGGGGCATATTTATTCTCAGGCACATTACTGTACGATTTCAGGTTTGTTaGCTGTGCAAACTTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLETIQTRGIFILRHITVRFQVC*LCKLLV Trigger: AACAAGAAGTTTGCACAGTCAACAAACCTGAAATCG...TACAGTAATGTGCCTGAGAATAAATATGCCCCTAGTTTGAATAGTTTCTAGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAACAAAAATATGGGGCTCATGAATTAAGTCTCCTGTTGAAACCAAACTTCGATATAAGTTGCAAATaGGTGGTGAACAGATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SQQKYGAHELSLLLKPNFDISCK*VVNRST Trigger: TGTTGATCTGTTCACCACCCATTTGCAACTTATATC...GAAGTTTGGTTTCAACAGGAGACTTAATTCATGAGCCCCATATTTTTGTTGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGAAACTATTCAAACTAGGGGCATATTTATTCTCAGGCACATTACTGTAGATGACGTTTCAGCTTaGAACTCTCAACAAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLETIQTRGIFILRHITVDDVSA*NSQQKL Trigger: AAGCTTTTGTTGAGAGTTCCAAGCTGAAACGTCATC...TACAGTAATGTGCCTGAGAATAAATATGCCCCTAGTTTGAATAGTTTCTAGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| 3UTR CAA 72 bp | CACAAGCCTTATCTGCTTTCAACATTGCTCATTTACTaGATAGCACTTGTACAGAGTTTTTGCTTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HKPYLLSTLLIY*IALVQSFCFHV Trigger: AACATGAAAGCAAAAACTCTGTACAAGTGCTATCAAGTAAATGAGCAATGTTGAAAGCAGATAAGGCTTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| 3UTR CAA 72 bp | GTCTTATCACATCACAAGCCTTATCTGCTTTCAACATaGCTCATTTACTTGATAGCACTTGTACAGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLSHHKPYLLST*LIYLIALVQSF Trigger: AAAACTCTGTACAAGTGCTATCAAGTAAATGAGCAATGTTGAAAGCAGATAAGGCTTGTGATGTGATAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CAA 90 bp | CACGCTTTCTTCTGCACCGGCCTCTATAAAGGTCGTCAAACCACAGAGATTCCCACCGGGAACCACAACTaGCAACACCTGTTCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HAFFCTGLYKGRQTTEIPTGNHN*QHLFIV Trigger: CACAATGAACAGGTGTTGCAAGTTGTGGTTCCCGGT...GGGAATCTCTGTGGTTTGACGACCTTTATAGAGGCCGGTGCAGAAGAAAGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR CAA 90 bp | GGCTACCATGCGCCCAATCGACACCTACATCTCCATATACTTCGATGGTTTGGCAGAGTCAGCCATCATTaGTGCCAAAGTCTGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GYHAPNRHLHLHILRWFGRVSHH*CQSLHQ Trigger: CTGATGCAGACTTTGGCACAAATGATGGCTGACTCT...GCCAAACCATCGAAGTATATGGAGATGTAGGTGTCGATTGGGCGCATGGTAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS TCA 90 bp | GGTAAATTTATACCGGGAACCACAACTTGCAACACCTGTTCATTGTaGAGAGAGGAGGAGGAAGAGGAAGAGGAGGAAGAGGAAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKFIPGTTTCNTCSL*REEEEEEEEEEEEE Trigger: CTCCTCTTCCTCTTCCTCCTCTTCCTCTTCCTCCTCCTCTCTTCACAATGAACAGGTGTTGCAAGTTGTGGTTCCCGGTATAAATTTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058098.15 ENSMUST00000112522.9 ENSMUST00000149249.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTCTGGAACCTACTATGTAGCTAAAGATGATGGCCTTGAATTCACGATCATTGGTAAAGCATCCTaGCTTTCCGCCGTCCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CWSGTYYVAKDDGLEFTIIGKAS*LSAVPN Trigger: GTTGGGGACGGCGGAAAGCAAGGATGCTTTACCAAT...GATCGTGAATTCAAGGCCATCATCTTTAGCTACATAGTAGGTTCCAGACCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS TCA 90 bp | CATTCATTCCAATCTTGCACATTAGTAACGGGACAATCCTGTAGATaGGTGACAAGGTCTCCCACAAAAAGGCCTCTGGGTCCAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HSFQSCTLVTGQSCR*VTRSPTKRPLGPMA Trigger: TGCCATTGGACCCAGAGGCCTTTTTGTGGGAGACCTTGTCACTCATCTACAGGATTGTCCCGTTACTAATGTGCAAGATTGGAATGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS TCA 90 bp | GGTGCCCTACATACAGCATATCAATTTGCGGGGGATGTTTCACTTTaGTTAGTCGGGTGTGAGTTTCCAAGGACGGTACTATACAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GALHTAYQFAGDVSL*LVGCEFPRTVLYRS Trigger: GCTTCTGTATAGTACCGTCCTTGGAAACTCACACCCGACTAATCAAAGTGAAACATCCCCCGCAAATTGATATGCTGTATGTAGGGCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGAGAAGCACCCAAACCCGACCCTAAAGATTAGCTGGCAGAGGTGTTCATCCAAAATTGAACCATaGGTAAAGCATCCTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGEKHPNPTLKISWQRCSSKIEP*VKHPCF Trigger: AAAGCAAGGATGCTTTACCAATGGTTCAATTTTGGA...TGAACACCTCTGCCAGCTAATCTTTAGGGTCGGGTTTGGGTGCTTCTCTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTCTGGAACCTACTATGTAGCTAAAGATGATGGCCTTGAATTCACGATCAGTCCCAGTGTCACATaGGCAGCCAAAAGTACACTG | + |
|
Preference number: 5 (lower is better) Translates to: CWSGTYYVAKDDGLEFTISPSVT*AAKSTL Trigger: CAGTGTACTTTTGGCTGCCAATGTGACACTGGGACT...GATCGTGAATTCAAGGCCATCATCTTTAGCTACATAGTAGGTTCCAGACCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGAAACTATTCAAACTAGGGGCATATTTATTCTCAGGCACATTACTGTAGGGGCTGAGCTCACCTaGACCATTCTCTGCCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLETIQTRGIFILRHITVGAELT*TILCRQ Trigger: CTGGCGGCAGAGAATGGTCAAGGTGAGCTCAGCCCC...TACAGTAATGTGCCTGAGAATAAATATGCCCCTAGTTTGAATAGTTTCTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTGCACCGGCCTCTATAAAGGTCGTCAAACCACAGAGATTCCCTTCATAGAGATGCTCAATCCATaGTTTTCCAGCCAGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FFCTGLYKGRQTTEIPFIEMLNP*FSSQSS Trigger: TGAAGACTGGCTGGAAAACAATGGATTGAGCATCTC...TATGAAGGGAATCTCTGTGGTTTGACGACCTTTATAGAGGCCGGTGCAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGGGCAGTTTTTAAATAGTGGGACAATGAACAGTGTCATCAGTGAATCAATTGGTAAAGCATCCTaGCTTTCCGCCGTCCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPGQFLNSGTMNSVISESIGKAS*LSAVPN Trigger: GTTGGGGACGGCGGAAAGCAAGGATGCTTTACCAAT...TGATTCACTGATGACACTGTTCATTGTCCCACTATTTAAAAACTGCCCTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTCTGGAACCTACTATGTAGCTAAAGATGATGGCCTTGAATTCACGATCAGAGTCAGCCATCATTaGTGCCAAAGTCTGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: CWSGTYYVAKDDGLEFTIRVSHH*CQSLHQ Trigger: CTGATGCAGACTTTGGCACAAATGATGGCTGACTCT...GATCGTGAATTCAAGGCCATCATCTTTAGCTACATAGTAGGTTCCAGACCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CAA 90 bp | GTGCCACCAGTATGTGGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCACCGGGAACCACAACTaGCAACACCTGTTCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VPPVCGCSINTKDTMTESTGNHN*QHLFIV Trigger: CACAATGAACAGGTGTTGCAAGTTGTGGTTCCCGGT...GCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCCACATACTGGTGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS GCA 90 bp | TCGGGTGTGAGTTTCCAAGGACGGTACTATACAGAAGCTAGAACTTaGGCCGCTTTTGCAATCTTTATTGCTTCTACAAACTTGAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGVSFQGRYYTEART*AAFAIFIASTNLSS Trigger: GCTACTCAAGTTTGTAGAAGCAATAAAGATTGCAAAAGCGGCGCAAGTTCTAGCTTCTGTATAGTACCGTCCTTGGAAACTCACACCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGAAACTATTCAAACTAGGGGCATATTTATTCTCAGGCACATTACTGTATTCTGCTCCCACTGTTaGTCACCCAGGTCAGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLETIQTRGIFILRHITVFCSHC*SPRSAF Trigger: GAACGCTGACCTGGGTGACAAACAGTGGGAGCAGAA...TACAGTAATGTGCCTGAGAATAAATATGCCCCTAGTTTGAATAGTTTCTAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
||
| CDS TCA 90 bp | ATTACTGAAGTAAGGGTAGCATCCAGGAAAGAGTTTAAAATCCATTaGCCATCCAAGGCAAAGCAGGGCACTGCATTAACAATAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ITEVRVASRKEFKIH*PSKAKQGTALTIAR Trigger: TCTGGCTATTGTTAATGCAGTGCCCTGCTTTGCCTTGGATGGTCAATGGATTTTAAACTCTTTCCTGGATGCTACCCTTACTTCAGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS-3UTR CAA 90 bp | TGCTGGTCTGGAACCTACTATGTAGCTAAAGATGATGGCCTTGAATTCACGATCACATTCATTCCAATCTaGCACATTAGTAACGGGACA | + |
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Preference number: 5 (lower is better) Translates to: CWSGTYYVAKDDGLEFTITFIPI*HISNGT Trigger: TGTCCCGTTACTAATGTGCAAGATTGGAATGAATGT...GATCGTGAATTCAAGGCCATCATCTTTAGCTACATAGTAGGTTCCAGACCAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS-3UTR CAA 90 bp | GTGCCACCAGTATGTGGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCGCCATTAAATCGAACTaGTTCCCTAATAGCTGCTAT | + |
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Preference number: 5 (lower is better) Translates to: VPPVCGCSINTKDTMTESAIKSN*FPNSCY Trigger: ATAGCAGCTATTAGGGAACAAGTTCGATTTAATGGC...GCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCCACATACTGGTGGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS-3UTR CAA 90 bp | TTTAGTAATGAGGCCATTTGCATACAAATCTGGACTCCAGGAGAGAAGCACCCAATTGCTTCTACAAACTaGAGTAGCTTCAACTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: FSNEAICIQIWTPGEKHPIASTN*SSFNCF Trigger: AAAGCAGTTGAAGCTACTCAAGTTTGTAGAAGCAAT...TGGGTGCTTCTCTCCTGGAGTCCAGATTTGTATGCAAATGGCCTCATTACTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS CCA 90 bp | AGGACAAAATTATGCCATATACCTGCACAAAATATCCTTAGCTGCTaGACTGGTGATATAAGTTGCAAATGGGTGGTGAACAGATCAACA | + |
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Preference number: 5 (lower is better) Translates to: RTKLCHIPAQNILSC*TGDISCKWVVNRST Trigger: TGTTGATCTGTTCACCACCCATTTGCAACTTATATCACCAGTCCAGCAGCTAAGGATATTTTGTGCAGGTATATGGCATAATTTTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS-3UTR CAA 90 bp | GCTTTTCATTTCTTCTACTCCCTCTACTACAGAGTTTTTGGGTTCTCTAGATATGAGATGCTCAATCCATaGTTTTCCAGCCAGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: AFHFFYSLYYRVFGFSRYEMLNP*FSSQSS Trigger: TGAAGACTGGCTGGAAAACAATGGATTGAGCATCTC...ATATCTAGAGAACCCAAAAACTCTGTAGTAGAGGGAGTAGAAGAAATGAAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS-3UTR CAA 90 bp | TCTCCAGGGCAGTTTTTAAATAGTGGGACAATGAACAGTGTCATCAGTGAATCAGCCATTAAATCGAACTaGTTCCCTAATAGCTGCTAT | + |
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Preference number: 5 (lower is better) Translates to: SPGQFLNSGTMNSVISESAIKSN*FPNSCY Trigger: ATAGCAGCTATTAGGGAACAAGTTCGATTTAATGGC...TGATTCACTGATGACACTGTTCATTGTCCCACTATTTAAAAACTGCCCTGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112522.9 |
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| CDS-3UTR CAA 90 bp | GCTTTTCATTTCTTCTACTCCCTCTACTACAGAGTTTTTGGGTTCTCTAGATATGAACCATCTAGTCGTTaGTATGCTCTAACTGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AFHFFYSLYYRVFGFSRYEPSSR*YALTGK Trigger: CTTCCCAGTTAGAGCATACAAACGACTAGATGGTTC...ATATCTAGAGAACCCAAAAACTCTGTAGTAGAGGGAGTAGAAGAAATGAAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS-3UTR CAA 90 bp | GTGCCACCAGTATGTGGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTCTATGCTTAGAAAGTaGAAACGTGGGATGAAACTT | + |
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Preference number: 5 (lower is better) Translates to: VPPVCGCSINTKDTMTESSMLRK*KRGMKL Trigger: AAGTTTCATCCCACGTTTCAACTTTCTAAGCATAGA...GCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCCACATACTGGTGGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS-3UTR CAA 90 bp | TCTCCAGGGCAGTTTTTAAATAGTGGGACAATGAACAGTGTCATCAGTGAATCAATAGCAGAATTATCTTaGAACATCTTCTCGCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SPGQFLNSGTMNSVISESIAELS*NIFSQP Trigger: AGGCTGCGAGAAGATGTTCAAAGATAATTCTGCTAT...TGATTCACTGATGACACTGTTCATTGTCCCACTATTTAAAAACTGCCCTGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
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| CDS-3UTR CAA 90 bp | GGATGTTCAATAAATACCAAGGACACAATGACAGAAAGCTACATCACTAGGAAGAGAGAAATCAGGTACTaGACAAATGTCTCCACAATC | + |
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Preference number: 5 (lower is better) Translates to: GCSINTKDTMTESYITRKREIRY*TNVSTI Trigger: GATTGTGGAGACATTTGTCAAGTACCTGATTTCTCT...CTTCCTAGTGATGTAGCTTTCTGTCATTGTGTCCTTGGTATTTATTGAACATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS-3UTR CAA 90 bp | TTCCTAGAAACTATTCAAACTAGGGGCATATTTATTCTCAGGCACATTACTGTATTGGAAAGTCTCCTTTaGGCTTTTTGGGTCTCATGC | + |
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Preference number: 5 (lower is better) Translates to: FLETIQTRGIFILRHITVLESLL*AFWVSC Trigger: GCATGAGACCCAAAAAGCCAAAAGGAGACTTTCCAA...TACAGTAATGTGCCTGAGAATAAATATGCCCCTAGTTTGAATAGTTTCTAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
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| CDS-3UTR CAA 90 bp | TTCCTAGAAACTATTCAAACTAGGGGCATATTTATTCTCAGGCACATTACTGTAGCGATTTCAGGTTTGTaGACTGTGCAAACTTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: FLETIQTRGIFILRHITVAISGL*TVQTSC Trigger: ACAAGAAGTTTGCACAGTCAACAAACCTGAAATCGC...TACAGTAATGTGCCTGAGAATAAATATGCCCCTAGTTTGAATAGTTTCTAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179062.8 |
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| CDS CCA 90 bp | AAGCTTAATTGTTGTAACGTTGATGCACTTATACAATACCCAATTTaGGGCTCATATGCAATGGTGTCTAAACATTCATTCCAATCTTGC | + |
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Preference number: 5 (lower is better) Translates to: KLNCCNVDALIQYPI*GSYAMVSKHSFQSC Trigger: GCAAGATTGGAATGAATGTTTAGACACCATTGCATATGAGCCCCAAATTGGGTATTGTATAAGTGCATCAACGTTACAACAATTAAGCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS CAA 72 bp | TACCGTGCTGTAACCATCCAGAGTCCCAGTGTCACATaGGCAGCCAAAAGTACACTGCCACCAAGCAAGATG | + |
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Preference number: 6 (lower is better) Translates to: YRAVTIQSPSVT*AAKSTLPPSKM Trigger: CATCTTGCTTGGTGGCAGTGTACTTTTGGCTGCCAATGTGACACTGGGACTCTGGATGGTTACAGCACGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS TCA 72 bp | ATACCGGGAACCACAACTTGCAACACCTGTTCATTGTaGAGAGAGGAGGAGGAAGAGGAAGAGGAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: IPGTTTCNTCSL*REEEEEEEEEE Trigger: CTCTTCCTCCTCTTCCTCTTCCTCCTCCTCTCTTCACAATGAACAGGTGTTGCAAGTTGTGGTTCCCGGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058098.15 ENSMUST00000112522.9 ENSMUST00000149249.2 |
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| CDS TCA 72 bp | CAATCTTGCACATTAGTAACGGGACAATCCTGTAGATaGGTGACAAGGTCTCCCACAAAAAGGCCTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: QSCTLVTGQSCR*VTRSPTKRPLG Trigger: ACCCAGAGGCCTTTTTGTGGGAGACCTTGTCACTCATCTACAGGATTGTCCCGTTACTAATGTGCAAGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS CAA 72 bp | AGAGGAAGAATAAGGAGAGGGAGAGTCAGCCATCATTaGTGCCAAAGTCTGCATCAGTGTTTTTCCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RGRIRRGRVSHH*CQSLHQCFSKE Trigger: CTCCTTGGAAAAACACTGATGCAGACTTTGGCACAAATGATGGCTGACTCTCCCTCTCCTTATTCTTCCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058098.15 ENSMUST00000112522.9 ENSMUST00000149249.2 |
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| CDS TCA 72 bp | CATACAGCATATCAATTTGCGGGGGATGTTTCACTTTaGTTAGTCGGGTGTGAGTTTCCAAGGACGGTACTA | + |
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Preference number: 6 (lower is better) Translates to: HTAYQFAGDVSL*LVGCEFPRTVL Trigger: TAGTACCGTCCTTGGAAACTCACACCCGACTAATCAAAGTGAAACATCCCCCGCAAATTGATATGCTGTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS GCA 72 bp | GGAAGAATAAGGAGAGGGAGAGTCAGCCATCATTTGTaGCAAAGTCTGCATCAGTGTTTTTCCAAGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: GRIRRGRVSHHL*QSLHQCFSKEK Trigger: TTTCTCCTTGGAAAAACACTGATGCAGACTTTGGCACAAATGATGGCTGACTCTCCCTCTCCTTATTCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058098.15 ENSMUST00000112522.9 ENSMUST00000149249.2 |
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| CDS GCA 72 bp | AGTTTCCAAGGACGGTACTATACAGAAGCTAGAACTTaGGCCGCTTTTGCAATCTTTATTGCTTCTACAAAC | + |
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Preference number: 6 (lower is better) Translates to: SFQGRYYTEART*AAFAIFIASTN Trigger: GTTTGTAGAAGCAATAAAGATTGCAAAAGCGGCGCAAGTTCTAGCTTCTGTATAGTACCGTCCTTGGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS CCA 72 bp | TTATGCCATATACCTGCACAAAATATCCTTAGCTGCTaGACTGGTGATATAAGTTGCAAATGGGTGGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LCHIPAQNILSC*TGDISCKWVVN Trigger: GTTCACCACCCATTTGCAACTTATATCACCAGTCCAGCAGCTAAGGATATTTTGTGCAGGTATATGGCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS CAA 90 bp | AAAAGTACACTGCCACCAAGCAAGATGAAAAATCCAATCAGATCTTaGACATCATTGTCTCCAATTACTGAAGTAAGGGTAGCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: KSTLPPSKMKNPIRS*TSLSPITEVRVASR Trigger: CCTGGATGCTACCCTTACTTCAGTAATTGGAGACAATGATGTCAAAGATCTGATTGGATTTTTCATCTTGCTTGGTGGCAGTGTACTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS GCA 72 bp | AAATTATGCCATATACCTGCACAAAATATCCTTAGCTaGTGGACTGGTGATATAAGTTGCAAATGGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KLCHIPAQNILS*WTGDISCKWVV Trigger: CACCACCCATTTGCAACTTATATCACCAGTCCAGCAGCTAAGGATATTTTGTGCAGGTATATGGCATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS CAA 72 bp | CTGCCACCAAGCAAGATGAAAAATCCAATCAGATCTTaGACATCATTGTCTCCAATTACTGAAGTAAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: LPPSKMKNPIRS*TSLSPITEVRV Trigger: TACCCTTACTTCAGTAATTGGAGACAATGATGTCAAAGATCTGATTGGATTTTTCATCTTGCTTGGTGGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058098.15 |
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| CDS GCA 72 bp | AAATTGAAGTTTGCCATCTTATATGAAAAGGAGAGATaGTCAATCCATTGTTTTCCAGCCAGTCTTCATAAG | + |
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Preference number: 6 (lower is better) Translates to: KLKFAILYEKER*SIHCFPASLHK Trigger: CTTATGAAGACTGGCTGGAAAACAATGGATTGAGCATCTCTCCTTTTCATATAAGATGGCAAACTTCAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058098.15 ENSMUST00000112522.9 |
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