Pregenerated sensors for MBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041607Ensembl transcript IDs: ENSMUST00000047865.14, ENSMUST00000062446.15, ENSMUST00000075372.13, ENSMUST00000080658.12, ENSMUST00000091789.11, ENSMUST00000102812.12, ENSMUST00000114674.11, ENSMUST00000114676.8, ENSMUST00000123251.9, ENSMUST00000132369.3, ENSMUST00000133193.9, ENSMUST00000142850.9, ENSMUST00000143506.8, ENSMUST00000152071.9, ENSMUST00000153478.9
Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTGGGAGCTGGGGGTGGTGGCTCTGCATGGCACGGAGGCACCACGTaGCCGGGGAGGGAGGATGCAGGAGACAACATGACCAGAAGTCCC | + |
Preference number: 1 (lower is better) Translates to: LGAGGGGSAWHGGTT*PGREDAGDNMTRSP Trigger: GGGACTTCTGGTCATGTTGTCTCCTGCATCCTCCCTCCCCGGGCACGTGGTGCCTCCGTGCCATGCAGAGCCACCACCCCCAGCTCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 90 bp | TGGCTCTGCATGGCACGGAGGCACCACGTGCCCGGGGAGGGAGGATaGAGGAGACAACATGACCAGAAGTCCCACTGCAGGGTGAGGGAG | + |
Preference number: 1 (lower is better) Translates to: WLCMARRHHVPGEGG*RRQHDQKSHCRVRE Trigger: CTCCCTCACCCTGCAGTGGGACTTCTGGTCATGTTGTCTCCTGCATCCTCCCTCCCCGGGCACGTGGTGCCTCCGTGCCATGCAGAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR TCA 90 bp | ACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCATaGGAAGTGGCCAGAGGGACAGCACGAGGCCACCAGAGAACTCCT | + |
Preference number: 1 (lower is better) Translates to: TNGHCHGELPLTTPP*EVARGTARGHQRTP Trigger: AGGAGTTCTCTGGTGGCCTCGTGCTGTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR GCA 90 bp | CCCGGGGAGGGAGGATGCAGGAGACAACATGACCAGAAGTCCCACTaGAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTGG | + |
Preference number: 1 (lower is better) Translates to: PGEGGCRRQHDQKSH*RVREGAQSLPGSIW Trigger: CCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCAGTGGGACTTCTGGTCATGTTGTCTCCTGCATCCTCCCTCCCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 90 bp | GTGCGACGCCCATCACATTCCTATTCCAGTGTCAGTGGATGGCTGTaGCGACCGGCCGAGGCAGCAGAAAGGCAGAGTCAGAGACCAGGG | + |
Preference number: 1 (lower is better) Translates to: VRRPSHSYSSVSGWL*RPAEAAERQSQRPG Trigger: CCCTGGTCTCTGACTCTGCCTTTCTGCTGCCTCGGCCGGTCGGCACAGCCATCCACTGACACTGGAATAGGAATGTGATGGGCGTCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | GTGTCGATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTaGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGA | + |
Preference number: 1 (lower is better) Translates to: VSMDIIRLGFSAPHP*SVAQASPASRAATR Trigger: TCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR CCA 90 bp | TGGACTGGGTGCGGCTGTGTGCATGTGTGGGCTTGGCTACACAGATaGACCTCAGGGGGCAGTCAGGATCCTCCAGATCTCAAGCGCCTC | + |
Preference number: 1 (lower is better) Translates to: WTGCGCVHVWAWLHR*TSGGSQDPPDLKRL Trigger: GAGGCGCTTGAGATCTGGAGGATCCTGACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGCCCACACATGCACACAGCCGCACCCAGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 90 bp | ATGAGAAGTGGCCAGAGGGACAGCACGAGGCCACCAGAGAACTCCTaGAGTCCCACTTCCAGATGCGCCATGTCCTTGGACTCTCCCTGG | + |
Preference number: 1 (lower is better) Translates to: MRSGQRDSTRPPENS*SPTSRCAMSLDSPW Trigger: CCAGGGAGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACTGCAGGAGTTCTCTGGTGGCCTCGTGCTGTCCCTCTGGCCACTTCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR GCA 90 bp | AGCACTGTCCGATCAGGGCTAGTATCTCAGACACAGGGACACGGTTaGTCTGCGATGGTGACTGGCCCAGTTCCACCTGCCCACCTCTCC | + |
Preference number: 1 (lower is better) Translates to: STVRSGLVSQTQGHG*SAMVTGPVPPAHLS Trigger: GGAGAGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATACTAGCCCTGATCGGACAGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | GCTTCTGTCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATaGGCAAGGTCGTTCAGTCACACTGGAGGGCAAACACTCCCGTGG | + |
Preference number: 1 (lower is better) Translates to: ASVQPYCSCAVWTKP*ARSFSHTGGQTLPW Trigger: CCACGGGAGTGTTTGCCCTCCAGTGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGACAGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR CCA 90 bp | CAGAGGGTGCGACGCCCATCACATTCCTATTCCAGTGTCAGTGGATaGCTGTGCCGACCGGCCGAGGCAGCAGAAAGGCAGAGTCAGAGA | + |
Preference number: 1 (lower is better) Translates to: QRVRRPSHSYSSVSG*LCRPAEAAERQSQR Trigger: TCTCTGACTCTGCCTTTCTGCTGCCTCGGCCGGTCGGCACAGCCATCCACTGACACTGGAATAGGAATGTGATGGGCGTCGCACCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR TCA 90 bp | TCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGTGTCCGTGCACCTaGACCTCCGGAGTCGAACAAGGTGCACGGGGAACAAGTCAGGGC | + |
Preference number: 1 (lower is better) Translates to: SEDGVGVNLEGCPCT*TSGVEQGARGTSQG Trigger: GCCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCGGAGGTTCAGGTGCACGGACACCCTTCCAAGTTCACCCCTACTCCATCCTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR GCA 90 bp | TGTCCGATCAGGGCTAGTATCTCAGACACAGGGACACGGTTGCTCTaGGATGGTGACTGGCCCAGTTCCACCTGCCCACCTCTCCTTCCT | + |
Preference number: 1 (lower is better) Translates to: CPIRASISDTGTRLL*DGDWPSSTCPPLLP Trigger: AGGAAGGAGAGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATACTAGCCCTGATCGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR TCA 90 bp | CGGCAAGCAATTAGCAGCCTGTACCCAGCAGAGAATGAGCACAGCTaGGGTTCGAAACCCGGAAGCACTGCGCAGAGGCAGGATCTGCTG | + |
Preference number: 1 (lower is better) Translates to: RQAISSLYPAENEHS*GSKPGSTAQRQDLL Trigger: CAGCAGATCCTGCCTCTGCGCAGTGCTTCCGGGTTTCGAACCTCAGCTGTGCTCATTCTCTGCTGGGTACAGGCTGCTAATTGCTTGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | GGTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATaGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGG | + |
Preference number: 1 (lower is better) Translates to: GYFSTEVSVYQWALP*RAAADHPTMRSGQR Trigger: CCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR CCA 90 bp | GCAGTCCCGTGTGAGAAGGACAAAGGGAGCAAAACAAGTAGAAATTaGCTAAGTGGCGACCACGCCCACTCCACGCCCAATCCCCCAGGC | + |
Preference number: 1 (lower is better) Translates to: AVPCEKDKGSKTSRN*LSGDHAHSTPNPPG Trigger: GCCTGGGGGATTGGGCGTGGAGTGGGCGTGGTCGCCACTTAGCCAATTTCTACTTGTTTTGCTCCCTTTGTCCTTCTCACACGGGACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | CACTGCAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTaGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCA | + |
Preference number: 1 (lower is better) Translates to: HCRVREGAQSLPGSI*GSFSTRVGHIAASP Trigger: TGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | AGGAACCTTCCTATGATTTGTGTTCTGAGACGCTGGCTGGTGGCCTaGGGACTGTCCTGGGACTGGGCGAGAGTTAATGGGCTCGGAGCA | + |
Preference number: 1 (lower is better) Translates to: RNLPMICVLRRWLVA*GLSWDWARVNGLGA Trigger: TGCTCCGAGCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCATAGGAAGGTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR TCA 90 bp | AAACAACCAAGGACCTTCAATCAAAGAGGCTTGAACACCATGACCTaGCCCCTGCTGTGTGCCGGGGCAGGGAGCTTCCAGCAGCGGAAG | + |
Preference number: 1 (lower is better) Translates to: KQPRTFNQRGLNTMT*PLLCAGAGSFQQRK Trigger: CTTCCGCTGCTGGAAGCTCCCTGCCCCGGCACACAGCAGGGGTCAGGTCATGGTGTTCAAGCCTCTTTGATTGAAGGTCCTTGGTTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | TGTGTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTaGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTTATTCTTTAC | + |
Preference number: 1 (lower is better) Translates to: CVLRRWLVAWGLSWD*ARVNGLGAGVFILY Trigger: GTAAAGAATAAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | CCTTCAAAGCCATCTCTTTGTGGTCCTGGGCCTCAGGGCAAGTCATaGGGAGTAGCAAGCCTTCTTAAGCTTGCTGGGAGGGCTGGGGTA | + |
Preference number: 1 (lower is better) Translates to: PSKPSLCGPGPQGKS*GVASLLKLAGRAGV Trigger: TACCCCAGCCCTCCCAGCAAGCTTAAGAAGGCTTGCTACTCCCCATGACTTGCCCTGAGGCCCAGGACCACAAAGAGATGGCTTTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR CCA 90 bp | ATGATTTGTGTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCCTaGGACTGGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTTATT | + |
Preference number: 1 (lower is better) Translates to: MICVLRRWLVAWGLS*DWARVNGLGAGVFI Trigger: AATAAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | CTGGGTAGGAAGAGGAACCTTCCTATGATTTGTGTTCTGAGACGCTaGCTGGTGGCCTGGGGACTGTCCTGGGACTGGGCGAGAGTTAAT | + |
Preference number: 1 (lower is better) Translates to: LGRKRNLPMICVLRR*LVAWGLSWDWARVN Trigger: ATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCATAGGAAGGTTCCTCTTCCTACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | CCACACAATCCAGGGCACAGTCAATCACTTGAGCTTTGGGAAGGATaGACTGTGGGTGGAGAATATCCTGCGCACAGCATGGAGCTGCCA | + |
Preference number: 1 (lower is better) Translates to: PHNPGHSQSLELWEG*TVGGEYPAHSMELP Trigger: TGGCAGCTCCATGCTGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGATTGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR CCA 90 bp | GCCTCAGGTCCACACAATCCAGGGCACAGTCAATCACTTGAGCTTTaGGAAGGATGGACTGTGGGTGGAGAATATCCTGCGCACAGCATG | + |
Preference number: 1 (lower is better) Translates to: ASGPHNPGHSQSLEL*EGWTVGGEYPAHSM Trigger: CATGCTGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGATTGTGTGGACCTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR CCA 90 bp | ATCCAGGGCACAGTCAATCACTTGAGCTTTGGGAAGGATGGACTGTaGGTGGAGAATATCCTGCGCACAGCATGGAGCTGCCAATCACCA | + |
Preference number: 1 (lower is better) Translates to: IQGTVNHLSFGKDGL*VENILRTAWSCQSP Trigger: TGGTGATTGGCAGCTCCATGCTGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR CCA 90 bp | CATGGGAGATCCAGAGCGGCTGTCTCTTCCTCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATGGAC | + |
Preference number: 1 (lower is better) Translates to: HGRSRAAVSSSLPLG*RWCSRCHNVLEEMD Trigger: GTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGAGGAAGAGACAGCCGCTCTGGATCTCCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143506.8 |
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3UTR TCA 90 bp | GCCGAGGCAGCAGAAAGGCAGAGTCAGAGACCAGGGACCCAGAACTaGCCAAGTGAGGCTACTCTGATTCACACGAGAAATCTCAAAAGT | + |
Preference number: 1 (lower is better) Translates to: AEAAERQSQRPGTQN*PSEATLIHTRNLKS Trigger: ACTTTTGAGATTTCTCGTGTGAATCAGAGTAGCCTCACTTGGTCAGTTCTGGGTCCCTGGTCTCTGACTCTGCCTTTCTGCTGCCTCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 90 bp | AGGTTCTATTTGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTaGATCTCCAGGTGGCACCCTGCAGGTGTGTTAGATGCACATCTT | + |
Preference number: 1 (lower is better) Translates to: RFYLGILFHTGGSHS*ISRWHPAGVLDAHL Trigger: AAGATGTGCATCTAACACACCTGCAGGGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCAAATAGAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 90 bp | GAGATTAAAGACGGAGCCAGAGAGAAACTCCCTGGGTTTTGTCATTaGGGCTGCACTCTGCCCTTTTGCCTCAAAGAACCACACCCAGGT | + |
Preference number: 1 (lower is better) Translates to: EIKDGAREKLPGFCH*GCTLPFCLKEPHPG Trigger: ACCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCTCTCTGGCTCCGTCTTTAATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR CCA 90 bp | GGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTaGCACCCTGCAGGTGTGTTAGATGCACATCTTAGAATGACATCA | + |
Preference number: 1 (lower is better) Translates to: GILFHTGGSHSCISR*HPAGVLDAHLRMTS Trigger: TGATGTCATTCTAAGATGTGCATCTAACACACCTGCAGGGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR TCA 90 bp | CTTGGAAGAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTaGATGCCAGCCCAGAAAACGCACAAAGGCTGGGTGTTGTCCCCA | + |
Preference number: 1 (lower is better) Translates to: LGRICLLRAFFMGCL*MPAQKTHKGWVLSP Trigger: TGGGGACAACACCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR TCA 90 bp | AGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGGATCCCTaGGTTCTCTCTTATCTGAAGGCAATGACAATGACGGTGGCACTA | + |
Preference number: 1 (lower is better) Translates to: SGVWVPSSLCFCPDP*VLSYLKAMTMTVAL Trigger: TAGTGCCACCGTCATTGTCATTGCCTTCAGATAAGAGAGAACTCAGGGATCCGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 90 bp | CATTCATTCACCCCCACCAAACTACATAGGACAAAGAGGAAAGTTTaGTGGAGGTGCAGAGGTCAGTCGGCAGACCTCCTCGCCTCAATT | + |
Preference number: 1 (lower is better) Translates to: HSFTPTKLHRTKRKV*WRCRGQSADLLASI Trigger: AATTGAGGCGAGGAGGTCTGCCGACTGACCTCTGCACCTCCAGCAAACTTTCCTCTTTGTCCTATGTAGTTTGGTGGGGGTGAATGAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 90 bp | GAAGAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATaGCAGCCCAGAAAACGCACAAAGGCTGGGTGTTGTCCCCACATT | + |
Preference number: 1 (lower is better) Translates to: EEYAFSEHSSWAAFE*QPRKRTKAGCCPHI Trigger: AATGTGGGGACAACACCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 90 bp | GAGAAACTCCCTGGGTTTTGTCATTGCGGCTGCACTCTGCCCTTTTaGCTCAAAGAACCACACCCAGGTTGTGAAATGGATCTTCCATTC | + |
Preference number: 1 (lower is better) Translates to: EKLPGFCHCGCTLPF*LKEPHPGCEMDLPF Trigger: GAATGGAAGATCCATTTCACAACCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR GCA 90 bp | TCTCTCCCAAGAGTTGCTCAGCTATCCAACAGAGAGATGGAAAAATaGCATACACTTACAAGGTGGCAGCCACCTGACAGACAAACCCTG | + |
Preference number: 1 (lower is better) Translates to: SLPRVAQLSNREMEK*HTLTRWQPPDRQTL Trigger: CAGGGTTTGTCTGTCAGGTGGCTGCCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCTGTTGGATAGCTGAGCAACTCTTGGGAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | AGCAAAAAGACCTTGGAAGAATATGCCTTCTCAGAGCATTCTTCATaGGCTGCCTTTGAATGCCAGCCCAGAAAACGCACAAAGGCTGGG | + |
Preference number: 1 (lower is better) Translates to: SKKTLEEYAFSEHSS*AAFECQPRKRTKAG Trigger: CCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGTCTTTTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR TCA 90 bp | AGCAGAAAGGCAGAGTCAGAGACCAGGGACCCAGAACTGACCAAGTaGGGCTACTCTGATTCACACGAGAAATCTCAAAAGTGTGAACTT | + |
Preference number: 1 (lower is better) Translates to: SRKAESETRDPELTK*GYSDSHEKSQKCEL Trigger: AAGTTCACACTTTTGAGATTTCTCGTGTGAATCAGAGTAGCCTCACTTGGTCAGTTCTGGGTCCCTGGTCTCTGACTCTGCCTTTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 90 bp | TTATTTCAATATTCAAGAATAGTAGGTGCTTCTGTCCAGCCATACTaGAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGT | + |
Preference number: 1 (lower is better) Translates to: LFQYSRIVGASVQPY*SCAVWTKPWARSFS Trigger: ACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGACAGAAGCACCTACTATTCTTGAATATTGAAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR GCA 90 bp | TCACCTTTCACAGGATGGATGGCAAGTTTATCTGGAGCCTTCCGTTaGCACGGTAACAGTGAAGACAAAACTAACTGCAGAACGGAGATG | + |
Preference number: 1 (lower is better) Translates to: SPFTGWMASLSGAFR*HGNSEDKTNCRTEM Trigger: CATCTCCGTTCTGCAGTTAGTTTTGTCTTCACTGTTACCGTGGCAACGGAAGGCTCCAGATAAACTTGCCATCCATCCTGTGAAAGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | CATCCATATCTCTCCCAAGAGTTGCTCAGCTATCCAACAGAGAGATaGAAAAATGCCATACACTTACAAGGTGGCAGCCACCTGACAGAC | + |
Preference number: 1 (lower is better) Translates to: HPYLSQELLSYPTER*KNAIHLQGGSHLTD Trigger: GTCTGTCAGGTGGCTGCCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCTGTTGGATAGCTGAGCAACTCTTGGGAGAGATATGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | TCTGTCCACTCTGGGAGAGCCATGGAACAACACATGAACACGCTATaGTTTTTCAACTTGAACCATGGCCACAAAACTGGTTCTAGACCC | + |
Preference number: 1 (lower is better) Translates to: SVHSGRAMEQHMNTL*FFNLNHGHKTGSRP Trigger: GGGTCTAGAACCAGTTTTGTGGCCATGGTTCAAGTTGAAAAACCATAGCGTGTTCATGTGTTGTTCCATGGCTCTCCCAGAGTGGACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR TCA 90 bp | GAACCCTGGGAGTACTTCTTGGGCACTTCCACTGTGTCCTTCATGTaGCCTTTAATGTCACCTTTCACAGGATGGATGGCAAGTTTATCT | + |
Preference number: 1 (lower is better) Translates to: EPWEYFLGTSTVSFM*PLMSPFTGWMASLS Trigger: AGATAAACTTGCCATCCATCCTGTGAAAGGTGACATTAAAGGTCACATGAAGGACACAGTGGAAGTGCCCAAGAAGTACTCCCAGGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR TCA 90 bp | GAAGGCGATACCGCTAAGTACAGACTGCAGGAATCTGGGGCAGCTTaGATTCTGTTAGCAAGTGAGACATATCCAGTGTTAATGACAAGT | + |
Preference number: 1 (lower is better) Translates to: EGDTAKYRLQESGAA*ILLASETYPVLMTS Trigger: ACTTGTCATTAACACTGGATATGTCTCACTTGCTAACAGAATTCAAGCTGCCCCAGATTCCTGCAGTCTGTACTTAGCGGTATCGCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 90 bp | TTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTaGGACGCCCATCACATTCCTATTCCAGTGTCAGTGGATGGCTGT | + |
Preference number: 1 (lower is better) Translates to: LDTNTSYKHSHIYRG*DAHHIPIPVSVDGC Trigger: ACAGCCATCCACTGACACTGGAATAGGAATGTGATGGGCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 90 bp | AAAACACTAACATATCAAGAGTGCAGATGTCTCCCTGAATATATGTaGATCTTCAATATGCAGAATCTTCCCGGATCTTGCAGAGCAAGC | + |
Preference number: 1 (lower is better) Translates to: KTLTYQECRCLPEYM*IFNMQNLPGSCRAS Trigger: GCTTGCTCTGCAAGATCCGGGAAGATTCTGCATATTGAAGATCCACATATATTCAGGGAGACATCTGCACTCTTGATATGTTAGTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR CCA 90 bp | TCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTaGCGATACATTAATCGGTGTTATCTTAAACCCACACTCTACTCA | + |
Preference number: 1 (lower is better) Translates to: SGNFFPAFSLTLTLL*RYINRCYLKPTLYS Trigger: TGAGTAGAGTGTGGGTTTAAGATAACACCGATTAATGTATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR TCA 90 bp | TGTTTAAAACAAAACACTAACATATCAAGAGTGCAGATGTCTCCCTaGATATATGTGGATCTTCAATATGCAGAATCTTCCCGGATCTTG | + |
Preference number: 1 (lower is better) Translates to: CLKQNTNISRVQMSP*IYVDLQYAESSRIL Trigger: CAAGATCCGGGAAGATTCTGCATATTGAAGATCCACATATATTCAGGGAGACATCTGCACTCTTGATATGTTAGTGTTTTGTTTTAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR CCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACCCAGTCGGGGTGCCGTaGGCCTGGCCCCACCGCGAT | + |
Preference number: 2 (lower is better) Translates to: LPWRAAADHPTMRSGQRDPVGVP*AWPHRD Trigger: ATCGCGGTGGGGCCAGGCCCACGGCACCCCGACTGG...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCCAGTCGGGGTGCCGTaGGCCTGGCCCCACCGCGAT | + |
Preference number: 2 (lower is better) Translates to: SPRPALHPGQRLDSVTGTPVGVP*AWPHRD Trigger: ATCGCGGTGGGGCCAGGCCCACGGCACCCCGACTGG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCATTTAACCAGTCGGGGTaGCGTGGGCCTGGCCCCACC | + |
Preference number: 2 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSFNQSG*RGPGPT Trigger: GGTGGGGCCAGGCCCACGGCACCCCGACTGGTTAAA...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTGTACCAATGGGCACTaGCATGGCGAGCTGCCGCTG | + |
Preference number: 2 (lower is better) Translates to: SSSSLERRPGQPCIQGSDCTNGH*HGELPL Trigger: CAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACA...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTTTAACCAGTCGGGGTaGCGTGGGCCTGGCCCCACC | + |
Preference number: 2 (lower is better) Translates to: SPRPALHPGQRLDSVTGTFNQSG*RGPGPT Trigger: GGTGGGGCCAGGCCCACGGCACCCCGACTGGTTAAA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACCCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG | + |
Preference number: 2 (lower is better) Translates to: LPWRAAADHPTMRSGQRDPVYPQ*PRKLEG Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCACCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG | + |
Preference number: 2 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSPVYPQ*PRKLEG Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG | + |
Preference number: 2 (lower is better) Translates to: SPRPALHPGQRLDSVTGTPVYPQ*PRKLEG Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTCCTGTTGGGGCCATTaGCCAGCCCACTCGCCCCTT | + |
Preference number: 2 (lower is better) Translates to: SPRPALHPGQRLDSVTGTSCWGH*PAHSPL Trigger: AAGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACGCCCAGGCCAGCCCTaGATCCAGGGCAGCGACTCG | + |
Preference number: 2 (lower is better) Translates to: SSHTAAALSGRSHGQGRSRPGQP*IQGSDS Trigger: CGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCT | + |
Preference number: 2 (lower is better) Translates to: SPRPALHPGQRLDSVTGTLRHAL*LLGGVP Trigger: AGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR TCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCTGACCACCCCACCATaGGAAGTGGCCAGAGGGACA | + |
Preference number: 2 (lower is better) Translates to: SPRPALHPGQRLDSVTGTLTTPP*EVARGT Trigger: TGTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCATTTAACCAGTCGGGGTaGCGTGGGCCTGGCCCCACC | + |
Preference number: 2 (lower is better) Translates to: LVCTNGHCHGELPLTTPPFNQSG*RGPGPT Trigger: GGTGGGGCCAGGCCCACGGCACCCCGACTGGTTAAA...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCAGCTGCCCAGCCTGTaGTCACATACCACAAGCCCC | + |
Preference number: 2 (lower is better) Translates to: SPRPALHPGQRLDSVTGTQLPSL*SHTTSP Trigger: GGGGCTTGTGGTATGTGAGCACAGGCTGGGCAGCTG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGCCAGTCGGGGTGCCGTaGGCCTGGCCCCACCGCGAT | + |
Preference number: 2 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQPVGVP*AWPHRD Trigger: ATCGCGGTGGGGCCAGGCCCACGGCACCCCGACTGG...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | TTCCCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGCTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCT | + |
Preference number: 2 (lower is better) Translates to: FPLPRSKSAGGVQGIAGLLRHAL*LLGGVP Trigger: AGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG...CAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACAAAACAAAGGAAGCCTaGACCACACAGTCCCCTGCG | + |
Preference number: 2 (lower is better) Translates to: SSSSLERRPGQPCIQGSDKTKEA*TTQSPA Trigger: CGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTT...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR TCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACGCTCTGGGGAGCCACTaGGGAGAGATGGTGACATTT | + |
Preference number: 2 (lower is better) Translates to: LPWRAAADHPTMRSGQRDALGSH*GEMVTF Trigger: AAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGC...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCATTTAACCAGTCGGGGTaGCGTGGGCCTGGCCCCACC | + |
Preference number: 2 (lower is better) Translates to: SSHTAAALSGRSHGQGRSFNQSG*RGPGPT Trigger: GGTGGGGCCAGGCCCACGGCACCCCGACTGGTTAAA...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCACGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG | + |
Preference number: 2 (lower is better) Translates to: LRHALWLLGGVPVYPQCPRSRTR*TGNKSG Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACCTGGACTCTCACAGCTaGCCAGCCTGTGCTCACATA | + |
Preference number: 2 (lower is better) Translates to: LPWRAAADHPTMRSGQRDLDSHS*PACAHI Trigger: TATGTGAGCACAGGCTGGGCAGCTGTGAGAGTCCAG...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCCCAGTCGGGGTGCCGTaGGCCTGGCCCCACCGCGAT | + |
Preference number: 2 (lower is better) Translates to: SLCSHTTSPRCISHSKTVPVGVP*AWPHRD Trigger: ATCGCGGTGGGGCCAGGCCCACGGCACCCCGACTGG...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCACTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCT | + |
Preference number: 2 (lower is better) Translates to: LVCTNGHCHGELPLTTPPLRHAL*LLGGVP Trigger: AGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | TGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTGGCACCGACACCAAGGGGCTCTaGTGGCCACGGGGCAGGAGA | + |
Preference number: 2 (lower is better) Translates to: WGSFSTRVGHIAASPGGTDTKGL*WPRGRR Trigger: TCTCCTGCCCCGTGGCCACCAGAGCCCCTTGGTGTC...GGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCGCTCTGGGGAGCCACTaGGGAGAGATGGTGACATTT | + |
Preference number: 2 (lower is better) Translates to: SPRPALHPGQRLDSVTGTALGSH*GEMVTF Trigger: AAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGC...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACATTTAACCAGTCGGGGTaGCGTGGGCCTGGCCCCACC | + |
Preference number: 2 (lower is better) Translates to: HTAAALSGRSHGQGRSVTFNQSG*RGPGPT Trigger: GGTGGGGCCAGGCCCACGGCACCCCGACTGGTTAAA...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAACGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG | + |
Preference number: 2 (lower is better) Translates to: PLPRSKSAGGVQGIAGLERSRTR*TGNKSG Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG | + |
Preference number: 2 (lower is better) Translates to: SSHTAAALSGRSHGQGRSPVYPQ*PRKLEG Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCACAGCTGCCCAGCCTGTaGTCACATACCACAAGCCCC | + |
Preference number: 2 (lower is better) Translates to: LVCTNGHCHGELPLTTPPQLPSL*SHTTSP Trigger: GGGGCTTGTGGTATGTGAGCACAGGCTGGGCAGCTG...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCT | + |
Preference number: 2 (lower is better) Translates to: LPWRAAADHPTMRSGQRDSPTSR*AMSLDS Trigger: AGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACT...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR CAA 90 bp | CAGCACTGTCCGATCAGGGCTAGTATCTCAGACACAGGGACACGGTaGCTCTGCGATGGTGACTGGCCCAGTTCCACCTGCCCACCTCTC | + |
Preference number: 2 (lower is better) Translates to: QHCPIRASISDTGTR*LCDGDWPSSTCPPL Trigger: GAGAGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATACTAGCCCTGATCGGACAGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGGAACAAGTCAGGGCTaGGAAGACCCCGAGAAAACT | + |
Preference number: 2 (lower is better) Translates to: LRHALWLLGGVPVYPQCPGTSQG*EDPEKT Trigger: AGTTTTCTCGGGGTCTTCTCAGCCCTGACTTGTTCC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR TCA 90 bp | AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTGGAACAAGTCAGGGCTaGGAAGACCCCGAGAAAACT | + |
Preference number: 2 (lower is better) Translates to: KCPQGHPTLDSHSCPACAGTSQG*EDPEKT Trigger: AGTTTTCTCGGGGTCTTCTCAGCCCTGACTTGTTCC...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR TCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACTGACCACCCCACCATaGGAAGTGGCCAGAGGGACA | + |
Preference number: 2 (lower is better) Translates to: SSHTAAALSGRSHGQGRSLTTPP*EVARGT Trigger: TGTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR TCA 90 bp | TGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTGGCACCGTTGCTCTGCGATGGTaGCTGGCCCAGTTCCACCTG | + |
Preference number: 2 (lower is better) Translates to: WGSFSTRVGHIAASPGGTVALRW*LAQFHL Trigger: CAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAAC...GGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCAAAACAAAGGAAGCCTaGACCACACAGTCCCCTGCG | + |
Preference number: 2 (lower is better) Translates to: SPRPALHPGQRLDSVTGTKTKEA*TTQSPA Trigger: CGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTT...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAAGGGCCACCCCACTCTaGACTCTCACAGCTGCCCAG | + |
Preference number: 2 (lower is better) Translates to: HTAAALSGRSHGQGRSVTRATPL*TLTAAQ Trigger: CTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCT...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR CAA 90 bp | TGTCCATCCCGGGCTGACTCTCTCCAGAGAGTCTCTGGGAAACTCTaGGCAAGTGGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGT | + |
Preference number: 2 (lower is better) Translates to: CPSRADSLQRVSGKL*ASGLEAGSGVWVPS Trigger: ACTAGGGACCCACACACCACTCCCTGCCTCCAGTCCACTTGCCAAGAGTTTCCCAGAGACTCTCTGGAGAGAGTCAGCCCGGGATGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAAGGAACAAGTCAGGGCTaGGAAGACCCCGAGAAAACT | + |
Preference number: 2 (lower is better) Translates to: PLPRSKSAGGVQGIAGLEGTSQG*EDPEKT Trigger: AGTTTTCTCGGGGTCTTCTCAGCCCTGACTTGTTCC...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG | + |
Preference number: 2 (lower is better) Translates to: SSHTAAALSGRSHGQGRSRSRTR*TGNKSG Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTCCTGTTGGGGCCATTaGCCAGCCCACTCGCCCCTT | + |
Preference number: 2 (lower is better) Translates to: DSPWALRGNRVLKSTSSGSCWGH*PAHSPL Trigger: AAGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | GGCTGGGGTATAACACAGCTGGCTGGCCTCAGGTCCACACAATCCAGGGCACAGCGCCTGTGCTCCAGATaGCTCTTGCTTTACACGTGG | + |
Preference number: 2 (lower is better) Translates to: GWGITQLAGLRSTQSRAQRLCSR*LLLYTW Trigger: CCACGTGTAAAGCAAGAGGCATCTGGAGCACAGGCG...CTGTGCCCTGGATTGTGTGGACCTGAGGCCAGCCAGCTGTGTTATACCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR CCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACACCAGTCGGGGTGCCGTaGGCCTGGCCCCACCGCGAT | + |
Preference number: 2 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTPVGVP*AWPHRD Trigger: ATCGCGGTGGGGCCAGGCCCACGGCACCCCGACTGG...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGCTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCT | + |
Preference number: 2 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQLRHAL*LLGGVP Trigger: AGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGAGGGCCACCCCACTCTaGACTCTCACAGCTGCCCAG | + |
Preference number: 2 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQRATPL*TLTAAQ Trigger: CTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCT...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGAGGGCCACCCCACTCTaGACTCTCACAGCTGCCCAG | + |
Preference number: 2 (lower is better) Translates to: DSPWALRGNRVLKSTSSGRATPL*TLTAAQ Trigger: CTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCT...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCATCCTTGGACTCTCCCTaGGCTCTGAGAGGAAACAGG | + |
Preference number: 2 (lower is better) Translates to: LVCTNGHCHGELPLTTPPSLDSP*ALRGNR Trigger: CCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGA...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACCCCACCATGAGAAGTaGCCAGAGGGACAGCACGAG | + |
Preference number: 2 (lower is better) Translates to: HTAAALSGRSHGQGRSVTPHHEK*PEGQHE Trigger: CTCGTGCTGTCCCTCTGGCCACTTCTCATGGTGGGG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | GGCTGGGGTATAACACAGCTGGCTGGCCTCAGGTCCACACAATCCAGGGCACAGGGGAAGGATGGACTGTaGGTGGAGAATATCCTGCGC | + |
Preference number: 2 (lower is better) Translates to: GWGITQLAGLRSTQSRAQGKDGL*VENILR Trigger: GCGCAGGATATTCTCCACCCACAGTCCATCCTTCCC...CTGTGCCCTGGATTGTGTGGACCTGAGGCCAGCCAGCTGTGTTATACCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR TCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCAACTCTCCCTGGGCTCTaGGAGGAAACAGGGTTCTTA | + |
Preference number: 2 (lower is better) Translates to: LVCTNGHCHGELPLTTPPTLPGL*EETGFL Trigger: TAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGT...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR TCA 90 bp | GACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTGGGCGAGAGTTAATGGGCGAAAAGAATGTGATTTaGAGGCAGTCGATGGAGGGA | + |
Preference number: 2 (lower is better) Translates to: DAGWWPGDCPGTGRELMGEKNVI*RQSMEG Trigger: TCCCTCCATCGACTGCCTTCAAATCACATTCTTTTC...GCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTTTGAACACCATGACCTaGCCCCTGCTGTGTGCCGGG | + |
Preference number: 2 (lower is better) Translates to: FYRLGNPFLRGHSTASLSLNTMT*PLLCAG Trigger: CCCGGCACACAGCAGGGGTCAGGTCATGGTGTTCAA...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR GCA 90 bp | GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGCGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG | + |
Preference number: 2 (lower is better) Translates to: GRKQRKPGPHSPLRHALWRSRTR*TGNKSG Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCCCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG | + |
Preference number: 2 (lower is better) Translates to: SLCSHTTSPRCISHSKTVPVYPQ*PRKLEG Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGCAGCTGCCCAGCCTGTaGTCACATACCACAAGCCCC | + |
Preference number: 2 (lower is better) Translates to: DSPWALRGNRVLKSTSSGQLPSL*SHTTSP Trigger: GGGGCTTGTGGTATGTGAGCACAGGCTGGGCAGCTG...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TGCAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTGGGGATCCTTTTGGCCCAGTTCCACCTaGCCACCTCTCCTTCCTTTC | + |
Preference number: 2 (lower is better) Translates to: CRVREGAQSLPGSIWGSFWPSST*PPLLPF Trigger: GAAAGGAAGGAGAGGTGGGCAGGTGGAACTGGGCCA...AAAGGATCCCCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTGACGGTGCCAGTGTaGGGCTCTTTGGAAGGTCTA | + |
Preference number: 2 (lower is better) Translates to: SSHTAAALSGRSHGQGRSVTVPV*GSLEGL Trigger: TAGACCTTCCAAAGAGCCCCACACTGGCACCGTCAC...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | GACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTGGGCGAGAGTTAATGGGCGCTCAAAGGTGTGGCTaGAGACTACAGCATTTTCAA | + |
Preference number: 2 (lower is better) Translates to: DAGWWPGDCPGTGRELMGAQRCG*RLQHFQ Trigger: TTGAAAATGCTGTAGTCTCCAGCCACACCTTTGAGC...GCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAGCTCTGGGGAGCCACTaGGGAGAGATGGTGACATTT | + |
Preference number: 2 (lower is better) Translates to: HTAAALSGRSHGQGRSVTALGSH*GEMVTF Trigger: AAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGC...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR TCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAACTCTCCCTGGGCTCTaGGAGGAAACAGGGTTCTTA | + |
Preference number: 2 (lower is better) Translates to: SSHTAAALSGRSHGQGRSTLPGL*EETGFL Trigger: TAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGT...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR TCA 90 bp | TCCCTCGAGATGAGTGCTTGGAAGCCACTACAATGTAAATCGGCCCTGGAAACAGGGCCAGACTGCTGCTaGGACACCAAGGGGCTCTGG | + |
Preference number: 2 (lower is better) Translates to: SLEMSAWKPLQCKSALETGPDCC*DTKGLW Trigger: CCAGAGCCCCTTGGTGTCTCAGCAGCAGTCTGGCCC...TGTTTCCAGGGCCGATTTACATTGTAGTGGCTTCCAAGCACTCATCTCGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | CTACACAGATGGACCTCAGGGGGCAGTCAGGATCCTCCAGATCTCAAGCGCCTCCCCTGGAAACAAGATTaGTGGATCAGGCTGAAGGCG | + |
Preference number: 2 (lower is better) Translates to: LHRWTSGGSQDPPDLKRLPWKQD*WIRLKA Trigger: CGCCTTCAGCCTGATCCATCAATCTTGTTTCCAGGG...GAGGCGCTTGAGATCTGGAGGATCCTGACTGCCCCCTGAGGTCCATCTGTGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR GCA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGCGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG | + |
Preference number: 2 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQRSRTR*TGNKSG Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTCCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG | + |
Preference number: 2 (lower is better) Translates to: RVLKSTSSGEPLRRDGDIPVYPQ*PRKLEG Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACTGGACTCTCACAGCTaGCCAGCCTGTGCTCACATA | + |
Preference number: 2 (lower is better) Translates to: HTAAALSGRSHGQGRSVTLDSHS*PACAHI Trigger: TATGTGAGCACAGGCTGGGCAGCTGTGAGAGTCCAG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTCCTGTTGGGGCCATTaGCCAGCCCACTCGCCCCTT | + |
Preference number: 2 (lower is better) Translates to: RVLKSTSSGEPLRRDGDISCWGH*PAHSPL Trigger: AAGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGA...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCT | + |
Preference number: 2 (lower is better) Translates to: SSHTAAALSGRSHGQGRSSPTSR*AMSLDS Trigger: AGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACT...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | GACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTGGGCGAGAGTTAATGGGCGACCTTGGAAGAATATaGCTTCTCAGAGCATTCTTC | + |
Preference number: 2 (lower is better) Translates to: DAGWWPGDCPGTGRELMGDLGRI*LLRAFF Trigger: GAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGTC...GCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR GCA 90 bp | GACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTGGGCGAGAGTTAATGGGCTTCCCAAGGAACATGTaGACAGTAAATGAACTTCCC | + |
Preference number: 2 (lower is better) Translates to: DAGWWPGDCPGTGRELMGFPRNM*TVNELP Trigger: GGGAAGTTCATTTACTGTGCACATGTTCCTTGGGAA...GCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR-3UTR CCA 90 bp | GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGCTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCT | + |
Preference number: 2 (lower is better) Translates to: VLKSTSSGEPLRRDGDIWLRHAL*LLGGVP Trigger: AGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR CAA 90 bp | CCACCAGAGAACTCCTGCAGTCCCACTTCCAGATGCGCCATGTCCTaGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGC | + |
Preference number: 2 (lower is better) Translates to: PPENSCSPTSRCAMS*DSPWALRGNRVLKS Trigger: GCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACTGCAGGAGTTCTCTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR TCA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGGCTCTGGGGAGCCACTaGGGAGAGATGGTGACATTT | + |
Preference number: 2 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQALGSH*GEMVTF Trigger: AAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGC...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGCAGCTGCCCAGCCTGTaGTCACATACCACAAGCCCC | + |
Preference number: 2 (lower is better) Translates to: VLKSTSSGEPLRRDGDIWQLPSL*SHTTSP Trigger: GGGGCTTGTGGTATGTGAGCACAGGCTGGGCAGCTG...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCT | + |
Preference number: 2 (lower is better) Translates to: HTAAALSGRSHGQGRSVTSPTSR*AMSLDS Trigger: AGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACT...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTCCGTGGAGGGGCCTCTaGCCTACATCTCAGTCAAAA | + |
Preference number: 2 (lower is better) Translates to: FYRLGNPFLRGHSTASLSPWRGL*PTSQSK Trigger: TTTTGACTGAGATGTAGGGCAGAGGCCCCTCCACGG...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAAAAACAAAGGAAGCCTaGACCACACAGTCCCCTGCG | + |
Preference number: 2 (lower is better) Translates to: HTAAALSGRSHGQGRSVTKTKEA*TTQSPA Trigger: CGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTT...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR TCA 90 bp | TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTAATCGCAGTCCCGTGTaGGAAGGACAAAGGGAGCAA | + |
Preference number: 2 (lower is better) Translates to: FYRLGNPFLRGHSTASLSNRSPV*EGQREQ Trigger: TTGCTCCCTTTGTCCTTCTCACACGGGACTGCGATT...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | GAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATGCCAGCCCAGAAGAGGCAGGATCTGCTaGAGCCCCAGGCATAGGGCA | + |
Preference number: 2 (lower is better) Translates to: EYAFSEHSSWAAFECQPRRGRIC*SPRHRA Trigger: TGCCCTATGCCTGGGGCTTCAGCAGATCCTGCCTCT...TCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | TCTTTGCAAAAATGCACTCCGTGGAAGGCGCCTGTGCTCCAGATGCCTCTTGCTCTGTCTTGTGAACGTTaGGGTGTTGACTGGGAGGGC | + |
Preference number: 2 (lower is better) Translates to: SLQKCTPWKAPVLQMPLALSCER*GVDWEG Trigger: GCCCTCCCAGTCAACACCTCAACGTTCACAAGACAG...AGCAAGAGGCATCTGGAGCACAGGCGCCTTCCACGGAGTGCATTTTTGCAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR TCA 90 bp | AGCAGGGCATCCTTCAAAGCCATCTCTTTGTGGTCCTGGGCCTCAGGGCAAGTCGCACAGTCAATCACTTaGGCTTTGGGAAGGATGGAC | + |
Preference number: 2 (lower is better) Translates to: SRASFKAISLWSWASGQVAQSIT*ALGRMD Trigger: GTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGC...GACTTGCCCTGAGGCCCAGGACCACAAAGAGATGGCTTTGAAGGATGCCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR GCA 90 bp | GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG | + |
Preference number: 2 (lower is better) Translates to: VIFPPRLVCTNGHCHGELRSRTR*TGNKSG Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCT | + |
Preference number: 2 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQSPTSR*AMSLDS Trigger: AGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACT...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TGCGGCTGTGTGCATGTGTGGGCTTGGCTACACAGATGGACCTCAGGGGGCAGTTGCCTCAAGTTAGGATaGAGAAGGCATTGCATTCCT | + |
Preference number: 2 (lower is better) Translates to: CGCVHVWAWLHRWTSGGSCLKLG*RRHCIP Trigger: AGGAATGCAATGCCTTCTGCATCCTAACTTGAGGCA...ACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGCCCACACATGCACACAGCCGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACAAGGGCCACCCCACTCTaGACTCTCACAGCTGCCCAG | + |
Preference number: 2 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTRATPL*TLTAAQ Trigger: CTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCT...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACAGTGTGGGGCTCTTTaGAAGGTCTACAGAAGGCAT | + |
Preference number: 2 (lower is better) Translates to: HTAAALSGRSHGQGRSVTQCGAL*KVYRRH Trigger: ATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | CTGTGCCTTCTGGCTACTTCATCTTTCCTGCCCAGTTTAGGTCCTGTTCCTTCGGCTTGGCTACACAGATaGACCTCAGGGGGCAGTCAG | + |
Preference number: 2 (lower is better) Translates to: LCLLATSSFLPSLGPVPSAWLHR*TSGGSQ Trigger: CTGACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGC...CGAAGGAACAGGACCTAAACTGGGCAGGAAAGATGAAGTAGCCAGAAGGCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | GTTTTGTCATTGCGGCTGCACTCTGCCCTTTTGCCTCAAAGAACCACACCCAGGCAAAAATGCACTCCGTaGAAGGCGCCTGTGCTCCAG | + |
Preference number: 2 (lower is better) Translates to: VLSLRLHSALLPQRTTPRQKCTP*KAPVLQ Trigger: CTGGAGCACAGGCGCCTTCCACGGAGTGCATTTTTG...CCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR GCA 90 bp | GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCTGGACTCTCACAGCTaGCCAGCCTGTGCTCACATA | + |
Preference number: 2 (lower is better) Translates to: VIFPPRLVCTNGHCHGELLDSHS*PACAHI Trigger: TATGTGAGCACAGGCTGGGCAGCTGTGAGAGTCCAG...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATGTACCAATGGGCACTaGCATGGCGAGCTGCCGCTG | + |
Preference number: 2 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTCTNGH*HGELPL Trigger: CAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACTAGGAGGCAGGGAATaGTTATTTTTCCACCGAGGT | + |
Preference number: 2 (lower is better) Translates to: HTAAALSGRSHGQGRSVTLGGRE*LFFHRG Trigger: ACCTCGGTGGAAAAATAACCATTCCCTGCCTCCTAG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | TGCAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTGGGGATCCTTTGGGTACTCAAAGACCTaGGCTTGTTTTAATGGCCCA | + |
Preference number: 2 (lower is better) Translates to: CRVREGAQSLPGSIWGSFGYSKT*ACFNGP Trigger: TGGGCCATTAAAACAAGCCCAGGTCTTTGAGTACCC...AAAGGATCCCCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 90 bp | CCTTGGAAGAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTaGAATGCCAGCCCAGAAAACGCACAAAGGCTGGGTGTTGTCCCC | + |
Preference number: 2 (lower is better) Translates to: PWKNMPSQSILHGLP*NASPENAQRLGVVP Trigger: GGGGACAACACCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | GGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGTATGGTTTTTCAACTTaGACCATGGCCACAAAACTG | + |
Preference number: 2 (lower is better) Translates to: GLEAGSGVWVPSSLCFCPYGFST*TMATKL Trigger: CAGTTTTGTGGCCATGGTTCAAGTTGAAAAACCATA...CGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACTCCCTGCCTCCAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | GTTTTGTCATTGCGGCTGCACTCTGCCCTTTTGCCTCAAAGAACCACACCCAGGACACATGGGTTCTTCTaGGCTAGTTGTGGAACGAGG | + |
Preference number: 2 (lower is better) Translates to: VLSLRLHSALLPQRTTPRTHGFF*ASCGTR Trigger: CCTCGTTCCACAACTAGCTCAGAAGAACCCATGTGT...CCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR GCA 90 bp | GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCT | + |
Preference number: 2 (lower is better) Translates to: VIFPPRLVCTNGHCHGELSPTSR*AMSLDS Trigger: AGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACT...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | AGAACTCATCAGTGCAATGAGATTAAAGACGGAGCCAGAGAGAAACTCCCTGGGCGTGGAAGGCGCCTGTaGTCCAGATGCCTCTTGCTT | + |
Preference number: 2 (lower is better) Translates to: RTHQCNEIKDGAREKLPGRGRRL*SRCLLL Trigger: AAGCAAGAGGCATCTGGAGCACAGGCGCCTTCCACG...CCCAGGGAGTTTCTCTCTGGCTCCGTCTTTAATCTCATTGCACTGATGAGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR CCA 90 bp | GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGAAAACAAAGGAAGCCTaGACCACACAGTCCCCTGCG | + |
Preference number: 2 (lower is better) Translates to: VIFPPRLVCTNGHCHGELKTKEA*TTQSPA Trigger: CGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTT...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGAAAACAAAGGAAGCCTaGACCACACAGTCCCCTGCG | + |
Preference number: 2 (lower is better) Translates to: VLKSTSSGEPLRRDGDIWKTKEA*TTQSPA Trigger: CGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTT...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGAGAGATGGTGACATTTaGCGGCCACACATATCTCCA | + |
Preference number: 2 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQRDGDI*RPHISP Trigger: TGGAGATATGTGTGGCCGCCAAATGTCACCATCTCT...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAAACAAGATGCAGTATTaGGCTACATCAACCATCACC | + |
Preference number: 2 (lower is better) Translates to: SSHTAAALSGRSHGQGRSNKMQY*ATSTIT Trigger: GGTGATGGTTGATGTAGCCCAATACTGCATCTTGTT...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | CTGTGCCTTCTGGCTACTTCATCTTTCCTGCCCAGTTTAGGTCCTGTTCCTTCGCCTCCTCGCCTCAATTaGACCATTGTTTCACAGCGG | + |
Preference number: 2 (lower is better) Translates to: LCLLATSSFLPSLGPVPSPPRLN*TIVSQR Trigger: CCGCTGTGAAACAATGGTCCAATTGAGGCGAGGAGG...CGAAGGAACAGGACCTAAACTGGGCAGGAAAGATGAAGTAGCCAGAAGGCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCACCAAGGGGCTCTGGTaGCCACGGGGCAGGAGAGCC | + |
Preference number: 2 (lower is better) Translates to: IRYKHKLQTFPHLQRVRRTKGLW*PRGRRA Trigger: GGCTCTCCTGCCCCGTGGCCACCAGAGCCCCTTGGT...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR GCA 90 bp | CTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTTGCTGGGAATTGAACTCACTGACCCCTGCTGTGTaGCGGGGCAGGGAGCTTCCA | + |
Preference number: 2 (lower is better) Translates to: LFFATFFRDGCGCWELNSLTPAV*RGRELP Trigger: TGGAAGCTCCCTGCCCCGGCACACAGCAGGGGTCAG...TGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATCCTTGGACTCTCCCTaGGCTCTGAGAGGAAACAGG | + |
Preference number: 2 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTSLDSP*ALRGNR Trigger: CCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTCATCTCTCCAGCCTTTaGGACTTTCTTAAGGACCTT | + |
Preference number: 2 (lower is better) Translates to: FYRLGNPFLRGHSTASLSHLSSL*DFLKDL Trigger: AAGGTCCTTAAGAAAGTCCCAAAGGCTGGAGAGATG...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACAGGAACAAGTCAGGGCTaGGAAGACCCCGAGAAAACT | + |
Preference number: 2 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTGTSQG*EDPEKT Trigger: AGTTTTCTCGGGGTCTTCTCAGCCCTGACTTGTTCC...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATATCCTGTTGGGGCCATTaGCCAGCCCACTCGCCCCTT | + |
Preference number: 2 (lower is better) Translates to: FWKFLPCFFSYPHVIVAISCWGH*PAHSPL Trigger: AAGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGA...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACATGGAAATTTCTTCCCTaGTTTTTCTCTTACCCTCAC | + |
Preference number: 2 (lower is better) Translates to: HTAAALSGRSHGQGRSVTWKFLP*FFSYPH Trigger: GTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCA...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR CCA 90 bp | AGAACTCATCAGTGCAATGAGATTAAAGACGGAGCCAGAGAGAAACTCCCTGGGATCCTGCGCACAGCATaGAGCTGCCAATCACCAAGA | + |
Preference number: 2 (lower is better) Translates to: RTHQCNEIKDGAREKLPGILRTA*SCQSPR Trigger: TCTTGGTGATTGGCAGCTCCATGCTGTGCGCAGGAT...CCCAGGGAGTTTCTCTCTGGCTCCGTCTTTAATCTCATTGCACTGATGAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR TCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATACTGACCACCCCACCATaGGAAGTGGCCAGAGGGACA | + |
Preference number: 2 (lower is better) Translates to: FWKFLPCFFSYPHVIVAILTTPP*EVARGT Trigger: TGTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAG...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR GCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATATGTACCAATGGGCACTaGCATGGCGAGCTGCCGCTG | + |
Preference number: 2 (lower is better) Translates to: FWKFLPCFFSYPHVIVAICTNGH*HGELPL Trigger: CAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACA...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | GAACCTTCCTATGATTTGTGTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCAGAGAGATGGAAAAATaGCATACACTTACAAGGTGG | + |
Preference number: 2 (lower is better) Translates to: EPSYDLCSETLAGGLGTVREMEK*HTLTRW Trigger: CCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCT...GACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCATAGGAAGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | AATCACTTGAGCTTTGGGAAGGATGGACTGTGGGTGGAGAATATCCTGCGCACAACTCAGTTCCTTCCATaGGGTTTGATCCTAGGTGCT | + |
Preference number: 2 (lower is better) Translates to: NHLSFGKDGLWVENILRTTQFLP*GLILGA Trigger: AGCACCTAGGATCAAACCCCATGGAAGGAACTGAGT...TGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR TCA 90 bp | TGGGACTGGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTTATTCTTTACCCCAATTGGAAAAGAATGTaGTTTGAAGGCAGTCGATGG | + |
Preference number: 2 (lower is better) Translates to: WDWARVNGLGAGVFILYPNWKRM*FEGSRW Trigger: CCATCGACTGCCTTCAAATCACATTCTTTTCCAATT...GGGGTAAAGAATAAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 90 bp | AGACAAACCCTGAACCACGGGCTCATGAGTAACCCACCCCAGATGTaGCCCTTGGAAACTAGACCATCTGCACAATTTTATCTTCTGATA | + |
Preference number: 2 (lower is better) Translates to: RQTLNHGLMSNPPQM*PLETRPSAQFYLLI Trigger: TATCAGAAGATAAAATTGTGCAGATGGTCTAGTTTCCAAGGGCAACATCTGGGGTGGGTTACTCATGAGCCCGTGGTTCAGGGTTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 90 bp | CCTTTGGACTCTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTaGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCT | + |
Preference number: 2 (lower is better) Translates to: PLDSILCNFLQRWLW*LGIELRTSGRAVSA Trigger: AGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAGAGTCCAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | CTGTGCCTTCTGGCTACTTCATCTTTCCTGCCCAGTTTAGGTCCTGTTCCTTCGCAGGGCATTTGCTTTTaGAACATCATGAAACACAAG | + |
Preference number: 2 (lower is better) Translates to: LCLLATSSFLPSLGPVPSQGICF*NIMKHK Trigger: CTTGTGTTTCATGATGTTTCAAAAGCAAATGCCCTG...CGAAGGAACAGGACCTAAACTGGGCAGGAAAGATGAAGTAGCCAGAAGGCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR GCA 90 bp | GCAATGAGATTAAAGACGGAGCCAGAGAGAAACTCCCTGGGTTTTGTCATTGCGGAGTGTGGAGTTCTTTaGAAAAATGCACTCCGTGGA | + |
Preference number: 2 (lower is better) Translates to: AMRLKTEPERNSLGFVIAECGVL*KNALRG Trigger: TCCACGGAGTGCATTTTTGCAAAGAACTCCACACTC...CGCAATGACAAAACCCAGGGAGTTTCTCTCTGGCTCCGTCTTTAATCTCATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR CCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATATCCTTGGACTCTCCCTaGGCTCTGAGAGGAAACAGG | + |
Preference number: 2 (lower is better) Translates to: FWKFLPCFFSYPHVIVAISLDSP*ALRGNR Trigger: CCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGA...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATGGACATTATTAGACTaGGGTTCTCAGCTCCTCATC | + |
Preference number: 2 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTWTLLD*GSQLLI Trigger: GATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATAGTGACGGTGCCAGTGTaGGGCTCTTTGGAAGGTCTA | + |
Preference number: 2 (lower is better) Translates to: FWKFLPCFFSYPHVIVAIVTVPV*GSLEGL Trigger: TAGACCTTCCAAAGAGCCCCACACTGGCACCGTCAC...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | CTTAAGGACCTTTGCAGTATAGGAAAACAAGCCCTGCTCCTCCCCATCTATAAAAAGAGGAAAGTTTGCTaGAGGTGCAGAGGTCAGTCG | + |
Preference number: 2 (lower is better) Translates to: LKDLCSIGKQALLLPIYKKRKVC*RCRGQS Trigger: CGACTGACCTCTGCACCTCCAGCAAACTTTCCTCTT...TTTATAGATGGGGAGGAGCAGGGCTTGTTTTCCTATACTGCAAAGGTCCTTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 90 bp | ACCCTGAACCACGGGCTCATGAGTAACCCACCCCAGATGTTGCCCTaGGAAACTAGACCATCTGCACAATTTTATCTTCTGATACATTTT | + |
Preference number: 2 (lower is better) Translates to: TLNHGLMSNPPQMLP*ETRPSAQFYLLIHF Trigger: AAAATGTATCAGAAGATAAAATTGTGCAGATGGTCTAGTTTCCAAGGGCAACATCTGGGGTGGGTTACTCATGAGCCCGTGGTTCAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 90 bp | CTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACT | + |
Preference number: 2 (lower is better) Translates to: LFFATFFRDGCGCWE*NSGPLEEQSVLLTT Trigger: AGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 90 bp | ACAGTAAATGAACTTCCCAAGGAGCATGCGCACAGCAAAAAGACCTaGGAAGAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTT | + |
Preference number: 2 (lower is better) Translates to: TVNELPKEHAHSKKT*EEYAFSEHSSWAAF Trigger: AAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGTCTTTTTGCTGTGCGCATGCTCCTTGGGAAGTTCATTTACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATAGGAACAAGTCAGGGCTaGGAAGACCCCGAGAAAACT | + |
Preference number: 2 (lower is better) Translates to: FWKFLPCFFSYPHVIVAIGTSQG*EDPEKT Trigger: AGTTTTCTCGGGGTCTTCTCAGCCCTGACTTGTTCC...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR GCA 90 bp | CTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTTGCTGGGAATTGAACTCAAAAGTTTGCTGGAGGTaGAGAGGTCAGTCGGCAGAC | + |
Preference number: 2 (lower is better) Translates to: LFFATFFRDGCGCWELNSKVCWR*RGQSAD Trigger: GTCTGCCGACTGACCTCTGCACCTCCAGCAAACTTT...TGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCCACATCTGTCCACTCTaGGAGAGCCATGGAACAACA | + |
Preference number: 2 (lower is better) Translates to: IRYKHKLQTFPHLQRVRRHICPL*ESHGTT Trigger: TGTTGTTCCATGGCTCTCCCAGAGTGGACAGATGTG...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR GCA 90 bp | GAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATGCCAGCCCAGAAACTCTGTATGGAAATaGCATAACTCTATTCTGCAT | + |
Preference number: 2 (lower is better) Translates to: EYAFSEHSSWAAFECQPRNSVWK*HNSILH Trigger: ATGCAGAATAGAGTTATGGCATTTCCATACAGAGTT...TCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATACTAGGAGGCAGGGAATaGTTATTTTTCCACCGAGGT | + |
Preference number: 2 (lower is better) Translates to: FWKFLPCFFSYPHVIVAILGGRE*LFFHRG Trigger: ACCTCGGTGGAAAAATAACCATTCCCTGCCTCCTAG...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CCA 90 bp | ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCCTCAATGCTACATCCTaGGTGCCTCAAGTTAGGATG | + |
Preference number: 2 (lower is better) Translates to: IRYKHKLQTFPHLQRVRRLNATS*VPQVRM Trigger: CATCCTAACTTGAGGCACCCAGGATGTAGCATTGAG...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CCA 90 bp | CTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTTGCTGGGAATTGAACTCAACCTTTGCCTATGCTTaGAATAAGCTTCAGGAGGGC | + |
Preference number: 2 (lower is better) Translates to: LFFATFFRDGCGCWELNSTFAYA*NKLQEG Trigger: GCCCTCCTGAAGCTTATTCCAAGCATAGGCAAAGGT...TGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR TCA 90 bp | ATTCTGTTAGCAAGTGAGACATATCCAGTGTTAATGACAAGTAGCGCTGACATCCGTTCGCCAGAGTTTTaGCAACAGACACAACTTACA | + |
Preference number: 2 (lower is better) Translates to: ILLASETYPVLMTSSADIRSPEF*QQTQLT Trigger: TGTAAGTTGTGTCTGTTGTCAAAACTCTGGCGAACG...GATGTCAGCGCTACTTGTCATTAACACTGGATATGTCTCACTTGCTAACAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 90 bp | TTTTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATaGTGGCGATACATTAATCGGTGTTATCTTAAACCCACACTCTAC | + |
Preference number: 2 (lower is better) Translates to: FSGNFFPAFSLTLTL*WRYINRCYLKPTLY Trigger: GTAGAGTGTGGGTTTAAGATAACACCGATTAATGTATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CAA 90 bp | AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT | + |
Preference number: 3 (lower is better) Translates to: SSSSLERRPGQPCIQGSDFLLGP*PSPLAP Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR GCA 72 bp | GGGGGTGGTGGCTCTGCATGGCACGGAGGCACCACGTaGCCGGGGAGGGAGGATGCAGGAGACAACATGACC | + |
Preference number: 3 (lower is better) Translates to: GGGGSAWHGGTT*PGREDAGDNMT Trigger: GGTCATGTTGTCTCCTGCATCCTCCCTCCCCGGGCACGTGGTGCCTCCGTGCCATGCAGAGCCACCACCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 72 bp | TGGGTGTTGTCCCCACATTCTGGGAGCTGGGGGTGGTaGCTCTGCATGGCACGGAGGCACCACGTGCCCGGG | + |
Preference number: 3 (lower is better) Translates to: WVLSPHSGSWGW*LCMARRHHVPG Trigger: CCCGGGCACGTGGTGCCTCCGTGCCATGCAGAGCCACCACCCCCAGCTCCCAGAATGTGGGGACAACACCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CAA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT | + |
Preference number: 3 (lower is better) Translates to: LPWRAAADHPTMRSGQRDFLLGP*PSPLAP Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CAA 90 bp | AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACAGATGCGCCATGTCCTaGGACTCTCCCTGGGCTCTG | + |
Preference number: 3 (lower is better) Translates to: SSSSLERRPGQPCIQGSDRCAMS*DSPWAL Trigger: CAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CAA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT | + |
Preference number: 3 (lower is better) Translates to: SPRPALHPGQRLDSVTGTFLLGP*PSPLAP Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR-3UTR CAA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACGGAGTAGGGGTGAACTaGGAAGGGTGTCCGTGCACC | + |
Preference number: 3 (lower is better) Translates to: LPWRAAADHPTMRSGQRDGVGVN*EGCPCT Trigger: GGTGCACGGACACCCTTCCAAGTTCACCCCTACTCC...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR GCA 72 bp | ATGGCACGGAGGCACCACGTGCCCGGGGAGGGAGGATaGAGGAGACAACATGACCAGAAGTCCCACTGCAGG | + |
Preference number: 3 (lower is better) Translates to: MARRHHVPGEGG*RRQHDQKSHCR Trigger: CCTGCAGTGGGACTTCTGGTCATGTTGTCTCCTGCATCCTCCCTCCCCGGGCACGTGGTGCCTCCGTGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 72 bp | AAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGC | + |
Preference number: 3 (lower is better) Translates to: KPGPHSPLRHAL*LLGGVPVYPQC Trigger: GCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR CCA 72 bp | CACAAAGGCTGGGTGTTGTCCCCACATTCTGGGAGCTaGGGGTGGTGGCTCTGCATGGCACGGAGGCACCAC | + |
Preference number: 3 (lower is better) Translates to: HKGWVLSPHSGS*GWWLCMARRHH Trigger: GTGGTGCCTCCGTGCCATGCAGAGCCACCACCCCCAGCTCCCAGAATGTGGGGACAACACCCAGCCTTTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 72 bp | GTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCCTaGGACTGGGCGAGAGTTAATGGGCTCGGAGCAGGT | + |
Preference number: 3 (lower is better) Translates to: VLRRWLVAWGLS*DWARVNGLGAG Trigger: ACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CAA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGGAGTAGGGGTGAACTaGGAAGGGTGTCCGTGCACC | + |
Preference number: 3 (lower is better) Translates to: LRHALWLLGGVPVYPQCPGVGVN*EGCPCT Trigger: GGTGCACGGACACCCTTCCAAGTTCACCCCTACTCC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR TCA 72 bp | TGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTaGCCACCCCACCATGAGAAGTGGCCAGAGGGACAG | + |
Preference number: 3 (lower is better) Translates to: CVPMGTAMASCR*PPHHEKWPEGQ Trigger: CTGTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR GCA 72 bp | GGCCAGAGGGACAGCACGAGGCCACCAGAGAACTCCTaGAGTCCCACTTCCAGATGCGCCATGTCCTTGGAC | + |
Preference number: 3 (lower is better) Translates to: GQRDSTRPPENS*SPTSRCAMSLD Trigger: GTCCAAGGACATGGCGCATCTGGAAGTGGGACTGCAGGAGTTCTCTGGTGGCCTCGTGCTGTCCCTCTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR GCA 72 bp | AAGAGGCTTGAACACCATGACCTGACCCCTGCTGTGTaGCGGGGCAGGGAGCTTCCAGCAGCGGAAGGTACC | + |
Preference number: 3 (lower is better) Translates to: KRLEHHDLTPAV*RGRELPAAEGT Trigger: GGTACCTTCCGCTGCTGGAAGCTCCCTGCCCCGGCACACAGCAGGGGTCAGGTCATGGTGTTCAAGCCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CCA 72 bp | AGACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTaGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTT | + |
Preference number: 3 (lower is better) Translates to: RRWLVAWGLSWD*ARVNGLGAGVF Trigger: AAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR GCA 72 bp | ACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATaGTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCC | + |
Preference number: 3 (lower is better) Translates to: TKEAWTTQSPAP*SLAPWRCACLS Trigger: GGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR GCA 72 bp | GGAGGATGCAGGAGACAACATGACCAGAAGTCCCACTaGAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGT | + |
Preference number: 3 (lower is better) Translates to: GGCRRQHDQKSH*RVREGAQSLPG Trigger: ACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCAGTGGGACTTCTGGTCATGTTGTCTCCTGCATCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | GACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTaGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCA | + |
Preference number: 3 (lower is better) Translates to: DIIRLGFSAPHP*SVAQASPASRA Trigger: TGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR CCA 72 bp | TTCCTGCCCAGTTTAGGTCCTGTTCCTTCGGCTGCCTaGACTGGGTGCGGCTGTGTGCATGTGTGGGCTTGG | + |
Preference number: 3 (lower is better) Translates to: FLPSLGPVPSAA*TGCGCVHVWAW Trigger: CCAAGCCCACACATGCACACAGCCGCACCCAGTCCAGGCAGCCGAAGGAACAGGACCTAAACTGGGCAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | CGACGCCCATCACATTCCTATTCCAGTGTCAGTGGATaGCTGTGCCGACCGGCCGAGGCAGCAGAAAGGCAG | + |
Preference number: 3 (lower is better) Translates to: RRPSHSYSSVSG*LCRPAEAAERQ Trigger: CTGCCTTTCTGCTGCCTCGGCCGGTCGGCACAGCCATCCACTGACACTGGAATAGGAATGTGATGGGCGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR-3UTR CAA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGGAGTAGGGGTGAACTaGGAAGGGTGTCCGTGCACC | + |
Preference number: 3 (lower is better) Translates to: SSHTAAALSGRSHGQGRSGVGVN*EGCPCT Trigger: GGTGCACGGACACCCTTCCAAGTTCACCCCTACTCC...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR CAA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT | + |
Preference number: 3 (lower is better) Translates to: DSPWALRGNRVLKSTSSGFLLGP*PSPLAP Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR CAA 90 bp | AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT | + |
Preference number: 3 (lower is better) Translates to: RCAMSLDSPWALRGNRVLFLLGP*PSPLAP Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR CAA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT | + |
Preference number: 3 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQFLLGP*PSPLAP Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR CAA 90 bp | TGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTGGCACCGACACAGGGACACGGTaGCTCTGCGATGGTGACTGG | + |
Preference number: 3 (lower is better) Translates to: WGSFSTRVGHIAASPGGTDTGTR*LCDGDW Trigger: CCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTC...GGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | TATCTCAGACACAGGGACACGGTTGCTCTGCGATGGTaGCTGGCCCAGTTCCACCTGCCCACCTCTCCTTCC | + |
Preference number: 3 (lower is better) Translates to: YLRHRDTVALRW*LAQFHLPTSPS Trigger: GGAAGGAGAGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR GCA 72 bp | CCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTaGTCACATACCACAAGCCCCCGTTGTATAAGCCAC | + |
Preference number: 3 (lower is better) Translates to: PPHSGLSQLPSL*SHTTSPRCISH Trigger: GTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR GCA 72 bp | AGGCCACCAGAGAACTCCTGCAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGA | + |
Preference number: 3 (lower is better) Translates to: RPPENSCSPTSR*AMSLDSPWALR Trigger: TCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACTGCAGGAGTTCTCTGGTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR GCA 72 bp | AGGGCTAGTATCTCAGACACAGGGACACGGTTGCTCTaGGATGGTGACTGGCCCAGTTCCACCTGCCCACCT | + |
Preference number: 3 (lower is better) Translates to: RASISDTGTRLL*DGDWPSSTCPP Trigger: AGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATACTAGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 72 bp | CGATCAGGGCTAGTATCTCAGACACAGGGACACGGTTaGTCTGCGATGGTGACTGGCCCAGTTCCACCTGCC | + |
Preference number: 3 (lower is better) Translates to: RSGLVSQTQGHG*SAMVTGPVPPA Trigger: GGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATACTAGCCCTGATCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | TCAGACACAGGGACACGGTTGCTCTGCGATGGTGACTaGCCCAGTTCCACCTGCCCACCTCTCCTTCCTTTC | + |
Preference number: 3 (lower is better) Translates to: SDTGTRLLCDGD*PSSTCPPLLPF Trigger: GAAAGGAAGGAGAGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | TGCGGCTGTGTGCATGTGTGGGCTTGGCTACACAGATaGACCTCAGGGGGCAGTCAGGATCCTCCAGATCTC | + |
Preference number: 3 (lower is better) Translates to: CGCVHVWAWLHR*TSGGSQDPPDL Trigger: GAGATCTGGAGGATCCTGACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGCCCACACATGCACACAGCCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CAA 90 bp | GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGGGAGTAGGGGTGAACTaGGAAGGGTGTCCGTGCACC | + |
Preference number: 3 (lower is better) Translates to: GRKQRKPGPHSPLRHALWGVGVN*EGCPCT Trigger: GGTGCACGGACACCCTTCCAAGTTCACCCCTACTCC...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR CAA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAAGATGCGCCATGTCCTaGGACTCTCCCTGGGCTCTG | + |
Preference number: 3 (lower is better) Translates to: HTAAALSGRSHGQGRSVTRCAMS*DSPWAL Trigger: CAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR CAA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACCAGTGTGGGGCTCTTaGGAAGGTCTACAGAAGGCA | + |
Preference number: 3 (lower is better) Translates to: SSHTAAALSGRSHGQGRSPVWGS*EGLQKA Trigger: TGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR TCA 72 bp | AGGACCTTCAATCAAAGAGGCTTGAACACCATGACCTaGCCCCTGCTGTGTGCCGGGGCAGGGAGCTTCCAG | + |
Preference number: 3 (lower is better) Translates to: RTFNQRGLNTMT*PLLCAGAGSFQ Trigger: CTGGAAGCTCCCTGCCCCGGCACACAGCAGGGGTCAGGTCATGGTGTTCAAGCCTCTTTGATTGAAGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 72 bp | CCATCACATTCCTATTCCAGTGTCAGTGGATGGCTGTaGCGACCGGCCGAGGCAGCAGAAAGGCAGAGTCAG | + |
Preference number: 3 (lower is better) Translates to: PSHSYSSVSGWL*RPAEAAERQSQ Trigger: CTGACTCTGCCTTTCTGCTGCCTCGGCCGGTCGGCACAGCCATCCACTGACACTGGAATAGGAATGTGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | CAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATaGGCAAGGTCGTTCAGTCACACTGGAGGGCAAACA | + |
Preference number: 3 (lower is better) Translates to: QPYCSCAVWTKP*ARSFSHTGGQT Trigger: TGTTTGCCCTCCAGTGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR CCA 72 bp | CCTCACAGCCTCATAAGGCCTGGGCATTCTACAGGCTaGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCT | + |
Preference number: 3 (lower is better) Translates to: PHSLIRPGHSTG*ETRSLEATAQP Trigger: AGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAATGCCCAGGCCTTATGAGGCTGTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR-3UTR CAA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACCAGTGTGGGGCTCTTaGGAAGGTCTACAGAAGGCA | + |
Preference number: 3 (lower is better) Translates to: HTAAALSGRSHGQGRSVTPVWGS*EGLQKA Trigger: TGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR CAA 90 bp | GGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGCAGAGATGGTTGTGGTaGCTGGGAATTGAACTCAGG | + |
Preference number: 3 (lower is better) Translates to: GLEAGSGVWVPSSLCFCPQRWLW*LGIELR Trigger: CCTGAGTTCAATTCCCAGCAACCACAACCATCTCTG...CGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACTCCCTGCCTCCAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | AAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTaGCATTTGGCGGCCACACATATCTCCAGCGTGTTC | + |
Preference number: 3 (lower is better) Translates to: KHQLWGATEERW*HLAATHISSVF Trigger: GAACACGCTGGAGATATGTGTGGCCGCCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR TCA 72 bp | CGAAACCCGGAAGCACTGCGCAGAGGCAGGATCTGCTaGAGCCCCAGGCATAGGGCATGTATACCTAAGAAC | + |
Preference number: 3 (lower is better) Translates to: RNPEALRRGRIC*SPRHRACIPKN Trigger: GTTCTTAGGTATACATGCCCTATGCCTGGGGCTTCAGCAGATCCTGCCTCTGCGCAGTGCTTCCGGGTTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR GCA 72 bp | GCTCCTCCCTCGACAGCATCTGAGTGTGGAGTTCTTTaGAAAAATGCACTCCGTGGAAGGCGCCTGTGCTCC | + |
Preference number: 3 (lower is better) Translates to: APPSTASECGVL*KNALRGRRLCS Trigger: GGAGCACAGGCGCCTTCCACGGAGTGCATTTTTGCAAAGAACTCCACACTCAGATGCTGTCGAGGGAGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR CCA 72 bp | GTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTaGGGATCCTTTTCCACACGGGTGGGTCACATAGCT | + |
Preference number: 3 (lower is better) Translates to: VREGAQSLPGSI*GSFSTRVGHIA Trigger: AGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | CCATCTCTTTGTGGTCCTGGGCCTCAGGGCAAGTCATaGGGAGTAGCAAGCCTTCTTAAGCTTGCTGGGAGG | + |
Preference number: 3 (lower is better) Translates to: PSLCGPGPQGKS*GVASLLKLAGR Trigger: CCTCCCAGCAAGCTTAAGAAGGCTTGCTACTCCCCATGACTTGCCCTGAGGCCCAGGACCACAAAGAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR-3UTR CAA 90 bp | AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTGGAGTAGGGGTGAACTaGGAAGGGTGTCCGTGCACC | + |
Preference number: 3 (lower is better) Translates to: RVLKSTSSGEPLRRDGDIGVGVN*EGCPCT Trigger: GGTGCACGGACACCCTTCCAAGTTCACCCCTACTCC...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR CAA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT | + |
Preference number: 3 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTFLLGP*PSPLAP Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR-3UTR CAA 90 bp | CAGGGCATCCTTCAAAGCCATCTCTTTGTGGTCCTGGGCCTCAGGGCAAGTCATCAAGCCTTCTTAAGCTaGCTGGGAGGGCTGGGGTAT | + |
Preference number: 3 (lower is better) Translates to: QGILQSHLFVVLGLRASHQAFLS*LGGLGY Trigger: ATACCCCAGCCCTCCCAGCAAGCTTAAGAAGGCTTG...ATGACTTGCCCTGAGGCCCAGGACCACAAAGAGATGGCTTTGAAGGATGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR TCA 72 bp | CCAGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTaGGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTG | + |
Preference number: 3 (lower is better) Translates to: PDAPCPWTLPGL*EETGFLKAPAL Trigger: CAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR GCA 72 bp | TTGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTaGATCTCCAGGTGGCACCCTGCAGGTGTGTTAGAT | + |
Preference number: 3 (lower is better) Translates to: LGILFHTGGSHS*ISRWHPAGVLD Trigger: ATCTAACACACCTGCAGGGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | AGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTaGCGGCCACACATATCTCCAGCGTGTTCTCCTAAG | + |
Preference number: 3 (lower is better) Translates to: SSGEPLRRDGDI*RPHISPACSPK Trigger: CTTAGGAGAACACGCTGGAGATATGTGTGGCCGCCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR CCA 72 bp | CCCACTTCCAGATGCGCCATGTCCTTGGACTCTCCCTaGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACC | + |
Preference number: 3 (lower is better) Translates to: PTSRCAMSLDSP*ALRGNRVLKST Trigger: GGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCTGGAAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR CCA 72 bp | AGAGGGATAAGGAGGTGTCGATGGACATTATTAGACTaGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCC | + |
Preference number: 3 (lower is better) Translates to: RGIRRCRWTLLD*GSQLLIPGASP Trigger: GGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR CCA 72 bp | CCCACCAAACTACATAGGACAAAGAGGAAAGTTTGCTaGAGGTGCAGAGGTCAGTCGGCAGACCTCCTCGCC | + |
Preference number: 3 (lower is better) Translates to: PTKLHRTKRKVC*RCRGQSADLLA Trigger: GGCGAGGAGGTCTGCCGACTGACCTCTGCACCTCCAGCAAACTTTCCTCTTTGTCCTATGTAGTTTGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | TATCTCAGCAGGGCATCCTTCAAAGCCATCTCTTTGTaGTCCTGGGCCTCAGGGCAAGTCATGGGGAGTAGC | + |
Preference number: 3 (lower is better) Translates to: YLSRASFKAISL*SWASGQVMGSS Trigger: GCTACTCCCCATGACTTGCCCTGAGGCCCAGGACCACAAAGAGATGGCTTTGAAGGATGCCCTGCTGAGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR TCA 72 bp | TCAGGATCCTCCAGATCTCAAGCGCCTCCCTCGAGATaGGTGCTTGGAAGCCACTACAATGTAAATCGGCCC | + |
Preference number: 3 (lower is better) Translates to: SGSSRSQAPPSR*VLGSHYNVNRP Trigger: GGGCCGATTTACATTGTAGTGGCTTCCAAGCACTCATCTCGAGGGAGGCGCTTGAGATCTGGAGGATCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR GCA 72 bp | GCCAGAGAGAAACTCCCTGGGTTTTGTCATTGCGGCTaGACTCTGCCCTTTTGCCTCAAAGAACCACACCCA | + |
Preference number: 3 (lower is better) Translates to: AREKLPGFCHCG*TLPFCLKEPHP Trigger: TGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCTCTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR GCA 72 bp | GACGGAGCCAGAGAGAAACTCCCTGGGTTTTGTCATTaGGGCTGCACTCTGCCCTTTTGCCTCAAAGAACCA | + |
Preference number: 3 (lower is better) Translates to: DGAREKLPGFCH*GCTLPFCLKEP Trigger: TGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCTCTCTGGCTCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR CCA 72 bp | GGCAGTCGATGGAGGGAAAGGCACATCTGTCCACTCTaGGAGAGCCATGGAACAACACATGAACACGCTATG | + |
Preference number: 3 (lower is better) Translates to: GSRWRERHICPL*ESHGTTHEHAM Trigger: CATAGCGTGTTCATGTGTTGTTCCATGGCTCTCCCAGAGTGGACAGATGTGCCTTTCCCTCCATCGACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | TTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTaGCACCCTGCAGGTGTGTTAGATGCACATCTTAGA | + |
Preference number: 3 (lower is better) Translates to: FHTGGSHSCISR*HPAGVLDAHLR Trigger: TCTAAGATGTGCATCTAACACACCTGCAGGGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | GGCAATGACAATGACGGTGGCACTAGACTGGAACCCTaGGAGTACTTCTTGGGCACTTCCACTGTGTCCTTC | + |
Preference number: 3 (lower is better) Translates to: GNDNDGGTRLEP*EYFLGTSTVSF Trigger: GAAGGACACAGTGGAAGTGCCCAAGAAGTACTCCCAGGGTTCCAGTCTAGTGCCACCGTCATTGTCATTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | TCCAGAGCGGCTGTCTCTTCCTCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAA | + |
Preference number: 3 (lower is better) Translates to: SRAAVSSSLPLG*RWCSRCHNVLE Trigger: TTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGAGGAAGAGACAGCCGCTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143506.8 |
||
3UTR TCA 72 bp | ACAGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTaGGGAGAGATGGTGACATTTGGCGGCCACACATAT | + |
Preference number: 3 (lower is better) Translates to: TGFLKAPALGSH*GEMVTFGGHTY Trigger: ATATGTGTGGCCGCCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR TCA 72 bp | AACTTGGACACAGATGTTAGTGTGTCCATCCCGGGCTaGCTCTCTCCAGAGAGTCTCTGGGAAACTCTTGGC | + |
Preference number: 3 (lower is better) Translates to: NLDTDVSVSIPG*LSPESLWETLG Trigger: GCCAAGAGTTTCCCAGAGACTCTCTGGAGAGAGTCAGCCCGGGATGGACACACTAACATCTGTGTCCAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR GCA 72 bp | TATTCAAGAATAGTAGGTGCTTCTGTCCAGCCATACTaGAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGG | + |
Preference number: 3 (lower is better) Translates to: YSRIVGASVQPY*SCAVWTKPWAR Trigger: CCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGACAGAAGCACCTACTATTCTTGAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
3UTR GCA 72 bp | GCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATaGCAGCCCAGAAAACGCACAAAGGCTGGGTGTTGT | + |
Preference number: 3 (lower is better) Translates to: AFSEHSSWAAFE*QPRKRTKAGCC Trigger: ACAACACCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR GCA 72 bp | CCACAGCACAGCCTCCCTTTCTTCCCAAGGAACATGTaGACAGTAAATGAACTTCCCAAGGAGCATGCGCAC | + |
Preference number: 3 (lower is better) Translates to: PQHSLPFFPRNM*TVNELPKEHAH Trigger: GTGCGCATGCTCCTTGGGAAGTTCATTTACTGTGCACATGTTCCTTGGGAAGAAAGGGAGGCTGTGCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR GCA 72 bp | TTGCACTCAGTTCCTTCCATGGGGTTTGATCCTAGGTaGTGCGTGCTCAGTGGCTGTCTTGTGAACGTTGAG | + |
Preference number: 3 (lower is better) Translates to: LHSVPSMGFDPR*CVLSGCLVNVE Trigger: CTCAACGTTCACAAGACAGCCACTGAGCACGCAGCACCTAGGATCAAACCCCATGGAAGGAACTGAGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR GCA 72 bp | CACTCCGTGGAAGGCGCCTGTGCTCCAGATGCCTCTTaGTTTACACGTGGTGATAGAAATCAAACCACAACG | + |
Preference number: 3 (lower is better) Translates to: HSVEGACAPDAS*FTRGDRNQTTT Trigger: CGTTGTGGTTTGATTTCTATCACCACGTGTAAAGCAAGAGGCATCTGGAGCACAGGCGCCTTCCACGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR GCA 72 bp | GCTTTGGGAAGGATGGACTGTGGGTGGAGAATATCCTaGGCACAGCATGGAGCTGCCAATCACCAAGATCAA | + |
Preference number: 3 (lower is better) Translates to: ALGRMDCGWRIS*AQHGAANHQDQ Trigger: TTGATCTTGGTGATTGGCAGCTCCATGCTGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR GCA 72 bp | AGAAACTCCCTGGGTTTTGTCATTGCGGCTGCACTCTaGCCTTTTGCCTCAAAGAACCACACCCAGGTTGTG | + |
Preference number: 3 (lower is better) Translates to: RNSLGFVIAAAL*PFASKNHTQVV Trigger: CACAACCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR CCA 72 bp | CTCCAGATCTCAAGCGCCTCCCTCGAGATGAGTGCTTaGAAGCCACTACAATGTAAATCGGCCCTGGAAACA | + |
Preference number: 3 (lower is better) Translates to: LQISSASLEMSA*KPLQCKSALET Trigger: TGTTTCCAGGGCCGATTTACATTGTAGTGGCTTCCAAGCACTCATCTCGAGGGAGGCGCTTGAGATCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | TACCCCAAAGCCATAACCTCACAGCCTCATAAGGCCTaGGCATTCTACAGGCTGGGAAACCCGTTCCTTAGA | + |
Preference number: 3 (lower is better) Translates to: YPKAITSQPHKA*AFYRLGNPFLR Trigger: TCTAAGGAACGGGTTTCCCAGCCTGTAGAATGCCCAGGCCTTATGAGGCTGTGAGGTTATGGCTTTGGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | CCGGACCTTAAAAGATGTTGCACTCAGTTCCTTCCATaGGGTTTGATCCTAGGTGCTGCGTGCTCAGTGGCT | + |
Preference number: 3 (lower is better) Translates to: PDLKRCCTQFLP*GLILGAACSVA Trigger: AGCCACTGAGCACGCAGCACCTAGGATCAAACCCCATGGAAGGAACTGAGTGCAACATCTTTTAAGGTCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR CCA 72 bp | ACAGTCAATCACTTGAGCTTTGGGAAGGATGGACTGTaGGTGGAGAATATCCTGCGCACAGCATGGAGCTGC | + |
Preference number: 3 (lower is better) Translates to: TVNHLSFGKDGL*VENILRTAWSC Trigger: GCAGCTCCATGCTGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR CCA 72 bp | CCACACAATCCAGGGCACAGTCAATCACTTGAGCTTTaGGAAGGATGGACTGTGGGTGGAGAATATCCTGCG | + |
Preference number: 3 (lower is better) Translates to: PHNPGHSQSLEL*EGWTVGGEYPA Trigger: CGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGATTGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR CCA 72 bp | GCGGCTGTCTCTTCCTCCCTTCCCTTGGGATGGAGGTaGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATG | + |
Preference number: 3 (lower is better) Translates to: AAVSSSLPLGWR*CSRCHNVLEEM Trigger: CATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGAGGAAGAGACAGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143506.8 |
||
3UTR-3UTR CAA 90 bp | AGAACTCATCAGTGCAATGAGATTAAAGACGGAGCCAGAGAGAAACTCCCTGGGTTCCTTCCATGGGGTTaGATCCTAGGTGCTGCGTGC | + |
Preference number: 3 (lower is better) Translates to: RTHQCNEIKDGAREKLPGFLPWG*ILGAAC Trigger: GCACGCAGCACCTAGGATCAAACCCCATGGAAGGAA...CCCAGGGAGTTTCTCTCTGGCTCCGTCTTTAATCTCATTGCACTGATGAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR TCA 72 bp | AGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTaGGCCATCTCTCCAGCCTTTGGGACTTTCTTAAGG | + |
Preference number: 3 (lower is better) Translates to: RTSGRAVSALNH*AISPAFGTFLR Trigger: CCTTAAGAAAGTCCCAAAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | ATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTaGATGCCAGCCCAGAAAACGCACAAAGGCTGGGTG | + |
Preference number: 3 (lower is better) Translates to: ICLLRAFFMGCL*MPAQKTHKGWV Trigger: CACCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | GCAGAAAGGCAGAGTCAGAGACCAGGGACCCAGAACTaGCCAAGTGAGGCTACTCTGATTCACACGAGAAAT | + |
Preference number: 3 (lower is better) Translates to: AERQSQRPGTQN*PSEATLIHTRN Trigger: ATTTCTCGTGTGAATCAGAGTAGCCTCACTTGGTCAGTTCTGGGTCCCTGGTCTCTGACTCTGCCTTTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | CTCAGGTCCACACAATCCAGGGCACAGTCAATCACTTaGGCTTTGGGAAGGATGGACTGTGGGTGGAGAATA | + |
Preference number: 3 (lower is better) Translates to: LRSTQSRAQSIT*ALGRMDCGWRI Trigger: TATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGATTGTGTGGACCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR GCA 72 bp | GTGACACTACATGATCAGCTTAGGTCCTCCGTCGGATaGTACTTGCTCTGGGTAGGAAGAGGAACCTTCCTA | + |
Preference number: 3 (lower is better) Translates to: VTLHDQLRSSVG*YLLWVGRGTFL Trigger: TAGGAAGGTTCCTCTTCCTACCCAGAGCAAGTAGCATCCGACGGAGGACCTAAGCTGATCATGTAGTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR GCA 72 bp | CCTGGGTTTTGTCATTGCGGCTGCACTCTGCCCTTTTaGCTCAAAGAACCACACCCAGGTTGTGAAATGGAT | + |
Preference number: 3 (lower is better) Translates to: PGFCHCGCTLPF*LKEPHPGCEMD Trigger: ATCCATTTCACAACCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR CCA 72 bp | CCTCCCCCTCCTGGGAGACTGGAAGATGTTTTCTTGTaGCACCTGTGTTGTCTGGATGTGACACTACATGAT | + |
Preference number: 3 (lower is better) Translates to: PPPPGRLEDVFL*HLCCLDVTLHD Trigger: ATCATGTAGTGTCACATCCAGACAACACAGGTGCCACAAGAAAACATCTTCCAGTCTCCCAGGAGGGGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | TATCTGAAGGCAATGACAATGACGGTGGCACTAGACTaGAACCCTGGGAGTACTTCTTGGGCACTTCCACTG | + |
Preference number: 3 (lower is better) Translates to: YLKAMTMTVALD*NPGSTSWALPL Trigger: CAGTGGAAGTGCCCAAGAAGTACTCCCAGGGTTCCAGTCTAGTGCCACCGTCATTGTCATTGCCTTCAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR-3UTR CAA 90 bp | GAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATGCCAGCCCAGAGACAAAGAGGAAAGTTaGCTGGAGGTGCAGAGGTCA | + |
Preference number: 3 (lower is better) Translates to: EYAFSEHSSWAAFECQPRDKEES*LEVQRS Trigger: TGACCTCTGCACCTCCAGCAAACTTTCCTCTTTGTC...TCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR-3UTR CAA 90 bp | TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTCACAGCAAAAAGACCTaGGAAGAATATGCCTTCTCA | + |
Preference number: 3 (lower is better) Translates to: FYRLGNPFLRGHSTASLSHSKKT*EEYAFS Trigger: TGAGAAGGCATATTCTTCCAAGGTCTTTTTGCTGTG...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | TGGGTCCCTAGTTCTCTTTGCTTCTGCCCGGATCCCTaGGTTCTCTCTTATCTGAAGGCAATGACAATGACG | + |
Preference number: 3 (lower is better) Translates to: WVPSSLCFCPDP*VLSYLKAMTMT Trigger: CGTCATTGTCATTGCCTTCAGATAAGAGAGAACTCAGGGATCCGGGCAGAAGCAAAGAGAACTAGGGACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | GCAGAGTCAGAGACCAGGGACCCAGAACTGACCAAGTaGGGCTACTCTGATTCACACGAGAAATCTCAAAAG | + |
Preference number: 3 (lower is better) Translates to: AESETRDPELTK*GYSDSHEKSQK Trigger: CTTTTGAGATTTCTCGTGTGAATCAGAGTAGCCTCACTTGGTCAGTTCTGGGTCCCTGGTCTCTGACTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | AACAGAGAGATGGAAAAATGCCATACACTTACAAGGTaGCAGCCACCTGACAGACAAACCCTGAACCACGGG | + |
Preference number: 3 (lower is better) Translates to: NREMEKCHTLTR*QPPDRQTLNHG Trigger: CCCGTGGTTCAGGGTTTGTCTGTCAGGTGGCTGCCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | TCTGCCCTTTTGCCTCAAAGAACCACACCCAGGTTGTaGAATGGATCTTCCATTCTATCTCAGCAGGGCATC | + |
Preference number: 3 (lower is better) Translates to: SALLPQRTTPRL*NGSSILSQQGI Trigger: GATGCCCTGCTGAGATAGAATGGAAGATCCATTTCACAACCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR CCA 72 bp | CTCTCCCAAGAGTTGCTCAGCTATCCAACAGAGAGATaGAAAAATGCCATACACTTACAAGGTGGCAGCCAC | + |
Preference number: 3 (lower is better) Translates to: LSQELLSYPTER*KNAIHLQGGSH Trigger: GTGGCTGCCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCTGTTGGATAGCTGAGCAACTCTTGGGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | ACCTTGGAAGAATATGCCTTCTCAGAGCATTCTTCATaGGCTGCCTTTGAATGCCAGCCCAGAAAACGCACA | + |
Preference number: 3 (lower is better) Translates to: TLEEYAFSEHSS*AAFECQPRKRT Trigger: TGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR-3UTR CAA 90 bp | ATTGGAAAAGAATGTGATTTGAAGGCAGTCGATGGAGGGAAAGGCACATCTGTCAACCCACCCCAGATGTaGCCCTTGGAAACTAGACCA | + |
Preference number: 3 (lower is better) Translates to: IGKECDLKAVDGGKGTSVNPPQM*PLETRP Trigger: TGGTCTAGTTTCCAAGGGCAACATCTGGGGTGGGTT...GACAGATGTGCCTTTCCCTCCATCGACTGCCTTCAAATCACATTCTTTTCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR-3UTR CAA 90 bp | ATTGGAAAAGAATGTGATTTGAAGGCAGTCGATGGAGGGAAAGGCACATCTGTCGCCCTGGAAACAAGATaGATGGATCAGGCTGAAGGC | + |
Preference number: 3 (lower is better) Translates to: IGKECDLKAVDGGKGTSVALETR*MDQAEG Trigger: GCCTTCAGCCTGATCCATCAATCTTGTTTCCAGGGC...GACAGATGTGCCTTTCCCTCCATCGACTGCCTTCAAATCACATTCTTTTCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | ACAGACACAACTTACAGGCAGAAAAGTTGCCCAGGCTaGGAGGGTACTCAAAGACCTGGGCTTGTTTTAATG | + |
Preference number: 3 (lower is better) Translates to: TDTTYRQKSCPG*EGTQRPGLVLM Trigger: CATTAAAACAAGCCCAGGTCTTTGAGTACCCTCTCAGCCTGGGCAACTTTTCTGCCTGTAAGTTGTGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | AGCCACTACAATGTAAATCGGCCCTGGAAACAAGATTaGTGGATCAGGCTGAAGGCGATACCGCTAAGTACA | + |
Preference number: 3 (lower is better) Translates to: SHYNVNRPWKQD*WIRLKAIPLST Trigger: TGTACTTAGCGGTATCGCCTTCAGCCTGATCCATCAATCTTGTTTCCAGGGCCGATTTACATTGTAGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR TCA 72 bp | AAGATGTTTTCTTGTGGCACCTGTGTTGTCTGGATGTaGCACTACATGATCAGCTTAGGTCCTCCGTCGGAT | + |
Preference number: 3 (lower is better) Translates to: KMFSCGTCVVWM*HYMISLGPPSD Trigger: ATCCGACGGAGGACCTAAGCTGATCATGTAGTGTCACATCCAGACAACACAGGTGCCACAAGAAAACATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR GCA 72 bp | AGAGTTGCTCAGCTATCCAACAGAGAGATGGAAAAATaGCATACACTTACAAGGTGGCAGCCACCTGACAGA | + |
Preference number: 3 (lower is better) Translates to: RVAQLSNREMEK*HTLTRWQPPDR Trigger: TCTGTCAGGTGGCTGCCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCTGTTGGATAGCTGAGCAACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR GCA 72 bp | ACAGGATGGATGGCAAGTTTATCTGGAGCCTTCCGTTaGCACGGTAACAGTGAAGACAAAACTAACTGCAGA | + |
Preference number: 3 (lower is better) Translates to: TGWMASLSGAFR*HGNSEDKTNCR Trigger: TCTGCAGTTAGTTTTGTCTTCACTGTTACCGTGGCAACGGAAGGCTCCAGATAAACTTGCCATCCATCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | AACTTCCCAAGGAGCATGCGCACAGCAAAAAGACCTTaGAAGAATATGCCTTCTCAGAGCATTCTTCATGGG | + |
Preference number: 3 (lower is better) Translates to: NFPRSMRTAKRP*KNMPSQSILHG Trigger: CCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGTCTTTTTGCTGTGCGCATGCTCCTTGGGAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | CCTTTTGCCTCAAAGAACCACACCCAGGTTGTGAAATaGATCTTCCATTCTATCTCAGCAGGGCATCCTTCA | + |
Preference number: 3 (lower is better) Translates to: PFASKNHTQVVK*IFHSISAGHPS Trigger: TGAAGGATGCCCTGCTGAGATAGAATGGAAGATCCATTTCACAACCTGGGTGTGGTTCTTTGAGGCAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR TCA 72 bp | ACCGCTAAGTACAGACTGCAGGAATCTGGGGCAGCTTaGATTCTGTTAGCAAGTGAGACATATCCAGTGTTA | + |
Preference number: 3 (lower is better) Translates to: TAKYRLQESGAA*ILLASETYPVL Trigger: TAACACTGGATATGTCTCACTTGCTAACAGAATTCAAGCTGCCCCAGATTCCTGCAGTCTGTACTTAGCGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | TCTGGGAGAGCCATGGAACAACACATGAACACGCTATaGTTTTTCAACTTGAACCATGGCCACAAAACTGGT | + |
Preference number: 3 (lower is better) Translates to: SGRAMEQHMNTL*FFNLNHGHKTG Trigger: ACCAGTTTTGTGGCCATGGTTCAAGTTGAAAAACCATAGCGTGTTCATGTGTTGTTCCATGGCTCTCCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | GACTCTATTCTTTGCAACTTTCTTCAGAGATGGTTGTaGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGA | + |
Preference number: 3 (lower is better) Translates to: DSILCNFLQRWL*LLGIELRTSGR Trigger: TCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | CCTTTGGACTCTATTCTTTGCAACTTTCTTCAGAGATaGTTGTGGTTGCTGGGAATTGAACTCAGGACCTCT | + |
Preference number: 3 (lower is better) Translates to: PLDSILCNFLQR*LWLLGIELRTS Trigger: AGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAGAGTCCAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
||
3UTR CCA 72 bp | ACATATCAAGAGTGCAGATGTCTCCCTGAATATATGTaGATCTTCAATATGCAGAATCTTCCCGGATCTTGC | + |
Preference number: 3 (lower is better) Translates to: TYQECRCLPEYM*IFNMQNLPGSC Trigger: GCAAGATCCGGGAAGATTCTGCATATTGAAGATCCACATATATTCAGGGAGACATCTGCACTCTTGATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
3UTR CCA 72 bp | TGCTTTACACGTGGTGATAGAAATCAAACCACAACGTaGTTACCAGAAGATCCAAGTTGTAAAGGTCCAAAA | + |
Preference number: 3 (lower is better) Translates to: CFTRGDRNQTTT*LPEDPSCKGPK Trigger: TTTTGGACCTTTACAACTTGGATCTTCTGGTAACCACGTTGTGGTTTGATTTCTATCACCACGTGTAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
CDS-3UTR CCA 90 bp | GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTGTGGGGGCGGTTCCCTaGGTCAGCTGGGTGGGCGCC | + |
Preference number: 4 (lower is better) Translates to: VCLSIRSAHGSWRGVPHRVGAVP*VSWVGA Trigger: GGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCAC...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
||
CDS-3UTR GCA 90 bp | AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGTGTGTGAGTCCTTaGCAGAGCCCCGCTTGGGCG | + |
Preference number: 4 (lower is better) Translates to: SSSSLERRPGQPCIQGSDSCVSP*QSPAWA Trigger: CGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGA...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS-3UTR CCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC | + |
Preference number: 4 (lower is better) Translates to: SPRPALHPGQRLDSVTGTCQSPA*AHPCHR Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTTGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: KCPQGHPTLDSHSCPACAWVRPC*DFWGRE Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCATCTTGGGTCCGGCCGTaGTGCGACTTCTGGGGCAGG | + |
Preference number: 4 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSSWVRP*CDFWGR Trigger: CCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGA...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC | + |
Preference number: 4 (lower is better) Translates to: SSSSLERRPGQPCIQGSDMPVSL*LGRKPC Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTCTTGGGTCCGGCCGTaGTGCGACTTCTGGGGCAGG | + |
Preference number: 4 (lower is better) Translates to: SPRPALHPGQRLDSVTGTSWVRP*CDFWGR Trigger: CCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTTTAGCCAGGGTACCTTaGCAGAGCCCCGCTTGGGCG | + |
Preference number: 4 (lower is better) Translates to: KCPQGHPTLDSHSCPACALARVP*QSPAWA Trigger: CGCCCAAGCGGGGCTCTGGCAAGGTACCCTGGCTAA...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | TTCCCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGACAGCCCAGGACGGCTaGGGGCATGAGAGGGCAGAG | + |
Preference number: 4 (lower is better) Translates to: FPLPRSKSAGGVQGIAGLTAQDG*GHERAE Trigger: CTCTGCCCTCTCATGCCCGCAGCCGTCCTGGGCTGT...CAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: LVCTNGHCHGELPLTTPPWVRPC*DFWGRE Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTTCGTGTGTGAGTCCTTaGCAGAGCCCCGCTTGGGCG | + |
Preference number: 4 (lower is better) Translates to: VCLSIRSAHGSWRGVPHRSCVSP*QSPAWA Trigger: CGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGA...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS-3UTR CCA 90 bp | AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG | + |
Preference number: 4 (lower is better) Translates to: SSSSLERRPGQPCIQGSDGGSHA*HGPWYL Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR TCA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCACGTCGTAGGCCCCCTTaGATCCCTTGTGAGCCGATT | + |
Preference number: 4 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSRRRPP*IPCEPI Trigger: AATCGGCTCACAAGGGATTCAAGGGGGCCTACGACG...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC | + |
Preference number: 4 (lower is better) Translates to: LPWRAAADHPTMRSGQRDMPVSL*LGRKPC Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | GCCATGGGAGATCCAGAGCGGCTGTCTCTTCCTCCCTTCCCTTGGGATGGAGGTTCTTGGGTCCGGCCGTaGTGCGACTTCTGGGGCAGG | + |
Preference number: 4 (lower is better) Translates to: AMGDPERLSLPPFPWDGGSWVRP*CDFWGR Trigger: CCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGA...ACCTCCATCCCAAGGGAAGGGAGGAAGAGACAGCCGCTCTGGATCTCCCATGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143506.8 |
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CDS-3UTR GCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACAGATTTTGGAAAGCGTaGCCTGGGCGTCGTAGGCCC | + |
Preference number: 4 (lower is better) Translates to: LPWRAAADHPTMRSGQRDRFWKA*PGRRRP Trigger: GGGCCTACGACGCCCAGGGCACGCTTTCCAAAATCT...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: LPWRAAADHPTMRSGQRDAWHGP*YLLWPG Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC | + |
Preference number: 4 (lower is better) Translates to: LPWRAAADHPTMRSGQRDTGFSS*VRPCCD Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCAGGTCTGCTGTGTGCTTaGAGTCTGTCACCGCCGTGT | + |
Preference number: 4 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSGLLCA*SLSPPC Trigger: ACACGGCGGTGACAGACTCCAAGCACACAGCAGACC...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CCA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCACCTGGGTCAGCTGGGTaGGCGCCTTGCCAGTTATTC | + |
Preference number: 4 (lower is better) Translates to: LRHALWLLGGVPVYPQCPPGSAG*APCQLF Trigger: GAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGG...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCAAGAGGCGGATCAAGTaGGGGCGGTTCCCTGGGTCA | + |
Preference number: 4 (lower is better) Translates to: SPRPALHPGQRLDSVTGTKRRIK*GRFPGS Trigger: TGACCCAGGGAACCGCCCCCACTTGATCCGCCTCTT...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: LPWRAAADHPTMRSGQRDPLPLG*RWCSRC Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGG...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC | + |
Preference number: 4 (lower is better) Translates to: VCLSIRSAHGSWRGVPHRMPVSL*LGRKPC Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC | + |
Preference number: 4 (lower is better) Translates to: LRHALWLLGGVPVYPQCPMPVSL*LGRKPC Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAAGAGGGCTCCGGCTCTaGTTTAGCCAGGGTACCTTG | + |
Preference number: 4 (lower is better) Translates to: LRHALWLLGGVPVYPQCPRGLRL*FSQGTL Trigger: CAAGGTACCCTGGCTAAAGCAGAGCCGGAGCCCTCT...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACATGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: HTAAALSGRSHGQGRSVTWVRPC*DFWGRE Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCATCGTGTGTGAGTCCTTaGCAGAGCCCCGCTTGGGCG | + |
Preference number: 4 (lower is better) Translates to: LVCTNGHCHGELPLTTPPSCVSP*QSPAWA Trigger: CGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGA...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS-3UTR CCA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCACTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCT | + |
Preference number: 4 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSLWPGT*IAVRVS Trigger: AGAGACCCTCACAGCGATCCAAGTACCTGGCCACAG...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: SPRPALHPGQRLDSVTGTAWHGP*YLLWPG Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGTGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC | + |
Preference number: 4 (lower is better) Translates to: GVPHREKSEDGVGVNLEGCQSPA*AHPCHR Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC | + |
Preference number: 4 (lower is better) Translates to: VCLSIRSAHGSWRGVPHRTGFSS*VRPCCD Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR TCA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCACCAGCCTCTCCTCGGTaGATCTCTCCATCCTTACTG | + |
Preference number: 4 (lower is better) Translates to: LRHALWLLGGVPVYPQCPPASPR*ISPSLL Trigger: CAGTAAGGATGGAGAGATTCACCGAGGAGAGGCTGG...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR TCA 90 bp | GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTAAGCTCGTCGGACTCTaGGGGCCTGTCTTTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: VCLSIRSAHGSWRGVPHRKLVGL*GPVFEG Trigger: ACCTTCAAAGACAGGCCCTCAGAGTCCGACGAGCTT...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR TCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACTCTTCTTGGATGGTCTaGAGCTCGTCGGACTCTGAG | + |
Preference number: 4 (lower is better) Translates to: LPWRAAADHPTMRSGQRDSSWMV*SSSDSE Trigger: CTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAGA...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR TCA 90 bp | CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAACGTCGTAGGCCCCCTTaGATCCCTTGTGAGCCGATT | + |
Preference number: 4 (lower is better) Translates to: PLPRSKSAGGVQGIAGLERRRPP*IPCEPI Trigger: AATCGGCTCACAAGGGATTCAAGGGGGCCTACGACG...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: DSPWALRGNRVLKSTSSGWVRPC*DFWGRE Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTTGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: RCAMSLDSPWALRGNRVLWVRPC*DFWGRE Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCACCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT | + |
Preference number: 4 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSPWYLL*PGTWIA Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TTCCCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: FPLPRSKSAGGVQGIAGLAWHGP*YLLWPG Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...CAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG | + |
Preference number: 4 (lower is better) Translates to: LRHALWLLGGVPVYPQCPGGSHA*HGPWYL Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TGGGACTGGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTTATTCTTTACCCCTGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC | + |
Preference number: 4 (lower is better) Translates to: WDWARVNGLGAGVFILYPCQSPA*AHPCHR Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...GGGGTAAAGAATAAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTGAGGTCCCATTGTTCTaGATCGCATCTGCCTCCCCA | + |
Preference number: 4 (lower is better) Translates to: KCPQGHPTLDSHSCPACAEVPLF*IASASP Trigger: TGGGGAGGCAGATGCGATCCAGAACAATGGGACCTC...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CCA 90 bp | GGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGCCTGGGTCAGCTGGGTaGGCGCCTTGCCAGTTATTC | + |
Preference number: 4 (lower is better) Translates to: GLEAGSGVWVPSSLCFCPPGSAG*APCQLF Trigger: GAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGG...CGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACTCCCTGCCTCCAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: SPRPALHPGQRLDSVTGTSLPLG*RWCSRC Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCATCCGTAGCCAAATCCTaGCTTCTGCCCCTCGGCCCC | + |
Preference number: 4 (lower is better) Translates to: SSHTAAALSGRSHGQGRSSVAKS*LLPLGP Trigger: GGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGA...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAACCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: PLPRSKSAGGVQGIAGLEPLPLG*RWCSRC Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGG...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAACCTCTCCCCTTCCCTTaGGATGGAGGTGGTGTTCGA | + |
Preference number: 4 (lower is better) Translates to: PLPRSKSAGGVQGIAGLEPLPFP*DGGGVR Trigger: TCGAACACCACCTCCATCCCAAGGGAAGGGGAGAGG...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 |
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CDS-3UTR TCA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCAGGTAGTTCTCGTGTGTaGGTCCTTGTACATGTGGCA | + |
Preference number: 4 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSGSSRV*VLVHVA Trigger: TGCCACATGTACAAGGACTCACACACGAGAACTACC...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR TCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACGGTAGTTCTCGTGTGTaGGTCCTTGTACATGTGGCA | + |
Preference number: 4 (lower is better) Translates to: LPWRAAADHPTMRSGQRDGSSRV*VLVHVA Trigger: TGCCACATGTACAAGGACTCACACACGAGAACTACC...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR TCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCACGTCGTAGGCCCCCTTaGATCCCTTGTGAGCCGATT | + |
Preference number: 4 (lower is better) Translates to: LVCTNGHCHGELPLTTPPRRRPP*IPCEPI Trigger: AATCGGCTCACAAGGGATTCAAGGGGGCCTACGACG...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTCTTGGGTCCGGCCGTaGTGCGACTTCTGGGGCAGG | + |
Preference number: 4 (lower is better) Translates to: DSPWALRGNRVLKSTSSGSWVRP*CDFWGR Trigger: CCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | TTCCCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGCTGGGTGGGCGCCTTaGCAGTTATTCTTTGGGTCT | + |
Preference number: 4 (lower is better) Translates to: FPLPRSKSAGGVQGIAGLAGWAP*QLFFGS Trigger: AGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGC...CAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR GCA 90 bp | GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGTCGTGTGTGAGTCCTTaGCAGAGCCCCGCTTGGGCG | + |
Preference number: 4 (lower is better) Translates to: GRKQRKPGPHSPLRHALWSCVSP*QSPAWA Trigger: CGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGA...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS-3UTR GCA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACTATAGTCGGAAGCTCTaGCTCCGTAGCCAAATCCTG | + |
Preference number: 4 (lower is better) Translates to: LPWRAAADHPTMRSGQRDYSRKL*LRSQIL Trigger: CAGGATTTGGCTACGGAGGCAGAGCTTCCGACTATA...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TTCCCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCT | + |
Preference number: 4 (lower is better) Translates to: FPLPRSKSAGGVQGIAGLLWPGT*IAVRVS Trigger: AGAGACCCTCACAGCGATCCAAGTACCTGGCCACAG...CAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTCCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT | + |
Preference number: 4 (lower is better) Translates to: VCLSIRSAHGSWRGVPHRPWYLL*PGTWIA Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCACCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT | + |
Preference number: 4 (lower is better) Translates to: LRHALWLLGGVPVYPQCPPWYLL*PGTWIA Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGTGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC | + |
Preference number: 4 (lower is better) Translates to: VIFPPRLVCTNGHCHGELCQSPA*AHPCHR Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCAACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC | + |
Preference number: 4 (lower is better) Translates to: LVCTNGHCHGELPLTTPPTGFSS*VRPCCD Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TCCCTCGAGATGAGTGCTTGGAAGCCACTACAATGTAAATCGGCCCTGGAAACAGTGGGGGCGGTTCCCTaGGTCAGCTGGGTGGGCGCC | + |
Preference number: 4 (lower is better) Translates to: SLEMSAWKPLQCKSALETVGAVP*VSWVGA Trigger: GGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCAC...TGTTTCCAGGGCCGATTTACATTGTAGTGGCTTCCAAGCACTCATCTCGAGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR TCA 90 bp | ACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTGATCCTGTTAGGACGGCTGCGGGCATaGGAGGGCAGAGGGCTCCGG | + |
Preference number: 4 (lower is better) Translates to: TYHKPPLYKPLQDCLILLGRLRA*EGRGLR Trigger: CCGGAGCCCTCTGCCCTCTCATGCCCGCAGCCGTCC...TAACAGGATCAGACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR TCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACAGGACGGCTGCGGGCATaGGAGGGCAGAGGGCTCCGG | + |
Preference number: 4 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTGRLRA*EGRGLR Trigger: CCGGAGCCCTCTGCCCTCTCATGCCCGCAGCCGTCC...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAATGGTCCATGGTACTTaGTGTGGCCAGGTACTTGGA | + |
Preference number: 4 (lower is better) Translates to: LRHALWLLGGVPVYPQCPMVHGT*CGQVLG Trigger: TCCAAGTACCTGGCCACAGCAAGTACCATGGACCAT...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTATGGTCCATGGTACTTaGTGTGGCCAGGTACTTGGA | + |
Preference number: 4 (lower is better) Translates to: KCPQGHPTLDSHSCPACAMVHGT*CGQVLG Trigger: TCCAAGTACCTGGCCACAGCAAGTACCATGGACCAT...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCACAGCCCAGGACGGCTaGGGGCATGAGAGGGCAGAG | + |
Preference number: 4 (lower is better) Translates to: SLCSHTTSPRCISHSKTVTAQDG*GHERAE Trigger: CTCTGCCCTCTCATGCCCGCAGCCGTCCTGGGCTGT...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: RVLKSTSSGEPLRRDGDIWVRPC*DFWGRE Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTCTTGGGTCCGGCCGTaGTGCGACTTCTGGGGCAGG | + |
Preference number: 4 (lower is better) Translates to: SLCSHTTSPRCISHSKTVSWVRP*CDFWGR Trigger: CCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGA...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TGCGGCTGTGTGCATGTGTGGGCTTGGCTACACAGATGGACCTCAGGGGGCAGTCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCT | + |
Preference number: 4 (lower is better) Translates to: CGCVHVWAWLHRWTSGGSLWPGT*IAVRVS Trigger: AGAGACCCTCACAGCGATCCAAGTACCTGGCCACAG...ACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGCCCACACATGCACACAGCCGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | GGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG | + |
Preference number: 4 (lower is better) Translates to: GLEAGSGVWVPSSLCFCPGGSHA*HGPWYL Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...CGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACTCCCTGCCTCCAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGAGTCCTTGTACATGTaGCACAGCCCAGGACGGCTG | + |
Preference number: 4 (lower is better) Translates to: SSHTAAALSGRSHGQGRSESLYM*HSPGRL Trigger: CAGCCGTCCTGGGCTGTGCCACATGTACAAGGACTC...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC | + |
Preference number: 4 (lower is better) Translates to: SSHTAAALSGRSHGQGRSTGFSS*VRPCCD Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GAACCTTCCTATGATTTGTGTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCGTTCCCTGGGTCAGCTaGGTGGGCGCCTTGCCAGTT | + |
Preference number: 4 (lower is better) Translates to: EPSYDLCSETLAGGLGTVVPWVS*VGALPV Trigger: AACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAAC...GACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCATAGGAAGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR TCA 90 bp | TGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTGGCACCAAGCTCGTCGGACTCTaGGGGCCTGTCTTTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: WGSFSTRVGHIAASPGGTKLVGL*GPVFEG Trigger: ACCTTCAAAGACAGGCCCTCAGAGTCCGACGAGCTT...GGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR GCA 90 bp | GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGAGAGGGCTCCGGCTCTaGTTTAGCCAGGGTACCTTG | + |
Preference number: 4 (lower is better) Translates to: GRKQRKPGPHSPLRHALWRGLRL*FSQGTL Trigger: CAAGGTACCCTGGCTAAAGCAGAGCCGGAGCCCTCT...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCACCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT | + |
Preference number: 4 (lower is better) Translates to: LVCTNGHCHGELPLTTPPPWYLL*PGTWIA Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: HTAAALSGRSHGQGRSVTAWHGP*YLLWPG Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC | + |
Preference number: 4 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTCQSPA*AHPCHR Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | ACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTGATCCTGTTATGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC | + |
Preference number: 4 (lower is better) Translates to: TYHKPPLYKPLQDCLILLCQSPA*AHPCHR Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...TAACAGGATCAGACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGGAGTCCTTGTACATGTaGCACAGCCCAGGACGGCTG | + |
Preference number: 4 (lower is better) Translates to: GRKQRKPGPHSPLRHALWESLYM*HSPGRL Trigger: CAGCCGTCCTGGGCTGTGCCACATGTACAAGGACTC...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTAAGAGGCGGATCAAGTaGGGGCGGTTCCCTGGGTCA | + |
Preference number: 4 (lower is better) Translates to: FYRLGNPFLRGHSTASLSKRRIK*GRFPGS Trigger: TGACCCAGGGAACCGCCCCCACTTGATCCGCCTCTT...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | TGCGGCTGTGTGCATGTGTGGGCTTGGCTACACAGATGGACCTCAGGGGGCAGTTGGGGTCTTCTTGGATaGTCTGAAGCTCGTCGGACT | + |
Preference number: 4 (lower is better) Translates to: CGCVHVWAWLHRWTSGGSWGLLG*SEARRT Trigger: AGTCCGACGAGCTTCAGACCATCCAAGAAGACCCCA...ACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGCCCACACATGCACACAGCCGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: HTAAALSGRSHGQGRSVTPLPLG*RWCSRC Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGCCTCTCCCCTTCCCTTaGGATGGAGGTGGTGTTCGA | + |
Preference number: 4 (lower is better) Translates to: GRKQRKPGPHSPLRHALWPLPFP*DGGGVR Trigger: TCGAACACCACCTCCATCCCAAGGGAAGGGGAGAGG...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 |
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CDS-3UTR GCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCAATGGTCCATGGTACTTaGTGTGGCCAGGTACTTGGA | + |
Preference number: 4 (lower is better) Translates to: LVCTNGHCHGELPLTTPPMVHGT*CGQVLG Trigger: TCCAAGTACCTGGCCACAGCAAGTACCATGGACCAT...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTWVRPC*DFWGRE Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | CTTCCCTTGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATGTGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: LPLGWRWCSRCHNVLEEMWVRPC*DFWGRE Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...CATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143506.8 |
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CDS-3UTR GCA 90 bp | TGCAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTGGGGATCCTTTGCTGGGTGGGCGCCTTaGCAGTTATTCTTTGGGTCT | + |
Preference number: 4 (lower is better) Translates to: CRVREGAQSLPGSIWGSFAGWAP*QLFFGS Trigger: AGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGC...AAAGGATCCCCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR GCA 90 bp | GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGTCGTGTGTGAGTCCTTaGCAGAGCCCCGCTTGGGCG | + |
Preference number: 4 (lower is better) Translates to: VLKSTSSGEPLRRDGDIWSCVSP*QSPAWA Trigger: CGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGA...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS-3UTR CCA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: DSPWALRGNRVLKSTSSGAWHGP*YLLWPG Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GAACCTTCCTATGATTTGTGTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: EPSYDLCSETLAGGLGTVAWHGP*YLLWPG Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...GACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCATAGGAAGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQAWHGP*YLLWPG Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC | + |
Preference number: 4 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQTGFSS*VRPCCD Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC | + |
Preference number: 4 (lower is better) Translates to: DSPWALRGNRVLKSTSSGTGFSS*VRPCCD Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG | + |
Preference number: 4 (lower is better) Translates to: LRHALWLLGGVPVYPQCPEEMDY*VFILGP Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG | + |
Preference number: 4 (lower is better) Translates to: SPRPALHPGQRLDSVTGTEEMDY*VFILGP Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTGGTCTGCTGTGTGCTTaGAGTCTGTCACCGCCGTGT | + |
Preference number: 4 (lower is better) Translates to: FYRLGNPFLRGHSTASLSGLLCA*SLSPPC Trigger: ACACGGCGGTGACAGACTCCAAGCACACAGCAGACC...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTGTTCCCTGGGTCAGCTaGGTGGGCGCCTTGCCAGTT | + |
Preference number: 4 (lower is better) Translates to: RVLKSTSSGEPLRRDGDIVPWVS*VGALPV Trigger: AACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAAC...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CCA 90 bp | GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGTCCGTAGCCAAATCCTaGCTTCTGCCCCTCGGCCCC | + |
Preference number: 4 (lower is better) Translates to: VIFPPRLVCTNGHCHGELSVAKS*LLPLGP Trigger: GGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGA...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGTCCGTAGCCAAATCCTaGCTTCTGCCCCTCGGCCCC | + |
Preference number: 4 (lower is better) Translates to: VLKSTSSGEPLRRDGDIWSVAKS*LLPLGP Trigger: GGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGA...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: RCAMSLDSPWALRGNRVLPLPLG*RWCSRC Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGG...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTCCTCTCCCCTTCCCTTaGGATGGAGGTGGTGTTCGA | + |
Preference number: 4 (lower is better) Translates to: RCAMSLDSPWALRGNRVLPLPFP*DGGGVR Trigger: TCGAACACCACCTCCATCCCAAGGGAAGGGGAGAGG...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 |
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3UTR CAA 72 bp | AACTCCTGCAGTCCCACTTCCAGATGCGCCATGTCCTaGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTT | + |
Preference number: 4 (lower is better) Translates to: NSCSPTSRCAMS*DSPWALRGNRV Trigger: AACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACTGCAGGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | AAAACAAGTAGAAATTGGCTAAGTGGCGACCACGCCCACTCCACGCCCAATCCCATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC | + |
Preference number: 4 (lower is better) Translates to: KTSRNWLSGDHAHSTPNPMPVSL*LGRKPC Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...GGGATTGGGCGTGGAGTGGGCGTGGTCGCCACTTAGCCAATTTCTACTTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR GCA 90 bp | CTACACAGATGGACCTCAGGGGGCAGTCAGGATCCTCCAGATCTCAAGCGCCTCGTTCTGGATCGCATCTaGCTCCCCAAACACATCACT | + |
Preference number: 4 (lower is better) Translates to: LHRWTSGGSQDPPDLKRLVLDRI*LPKHIT Trigger: AGTGATGTGTTTGGGGAGGCAGATGCGATCCAGAAC...GAGGCGCTTGAGATCTGGAGGATCCTGACTGCCCCCTGAGGTCCATCTGTGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCT | + |
Preference number: 4 (lower is better) Translates to: DSPWALRGNRVLKSTSSGLWPGT*IAVRVS Trigger: AGAGACCCTCACAGCGATCCAAGTACCTGGCCACAG...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT | + |
Preference number: 4 (lower is better) Translates to: HTAAALSGRSHGQGRSVTPWYLL*PGTWIA Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG | + |
Preference number: 4 (lower is better) Translates to: RCAMSLDSPWALRGNRVLGGSHA*HGPWYL Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC | + |
Preference number: 4 (lower is better) Translates to: SLCSHTTSPRCISHSKTVTGFSS*VRPCCD Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGGTCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: GVPHREKSEDGVGVNLEGVLPLG*RWCSRC Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGAC...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080658.12 |
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CDS-3UTR GCA 90 bp | GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC | + |
Preference number: 4 (lower is better) Translates to: VIFPPRLVCTNGHCHGELMPVSL*LGRKPC Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC | + |
Preference number: 4 (lower is better) Translates to: VLKSTSSGEPLRRDGDIWMPVSL*LGRKPC Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGAGATTTTGGAAAGCGTaGCCTGGGCGTCGTAGGCCC | + |
Preference number: 4 (lower is better) Translates to: VIFPPRLVCTNGHCHGELRFWKA*PGRRRP Trigger: GGGCCTACGACGCCCAGGGCACGCTTTCCAAAATCT...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: VIFPPRLVCTNGHCHGELAWHGP*YLLWPG Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCAGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG | + |
Preference number: 4 (lower is better) Translates to: LVCTNGHCHGELPLTTPPEEMDY*VFILGP Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTTGGGGTCTTCTTGGATaGTCTGAAGCTCGTCGGACT | + |
Preference number: 4 (lower is better) Translates to: RCAMSLDSPWALRGNRVLWGLLG*SEARRT Trigger: AGTCCGACGAGCTTCAGACCATCCAAGAAGACCCCA...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CCA 90 bp | GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: VIFPPRLVCTNGHCHGELPLPLG*RWCSRC Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGG...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR CAA 72 bp | TTCTATCTCAGCAGGGCATCCTTCAAAGCCATCTCTTaGTGGTCCTGGGCCTCAGGGCAAGTCATGGGGAGT | + |
Preference number: 4 (lower is better) Translates to: FYLSRASFKAIS*WSWASGQVMGS Trigger: ACTCCCCATGACTTGCCCTGAGGCCCAGGACCACAAAGAGATGGCTTTGAAGGATGCCCTGCTGAGATAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR CAA 72 bp | AGACGGAGCCAGAGAGAAACTCCCTGGGTTTTGTCATaGCGGCTGCACTCTGCCCTTTTGCCTCAAAGAACC | + |
Preference number: 4 (lower is better) Translates to: RRSQRETPWVLS*RLHSALLPQRT Trigger: GGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCTCTCTGGCTCCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
||
CDS-3UTR GCA 90 bp | GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGGTTCTGGATCGCATCTaGCTCCCCAAACACATCACT | + |
Preference number: 4 (lower is better) Translates to: GVPHREKSEDGVGVNLEGVLDRI*LPKHIT Trigger: AGTGATGTGTTTGGGGAGGCAGATGCGATCCAGAAC...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR GCA 90 bp | GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGTATAGTCGGAAGCTCTaGCTCCGTAGCCAAATCCTG | + |
Preference number: 4 (lower is better) Translates to: GVPHREKSEDGVGVNLEGYSRKL*LRSQIL Trigger: CAGGATTTGGCTACGGAGGCAGAGCTTCCGACTATA...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCT | + |
Preference number: 4 (lower is better) Translates to: VLKSTSSGEPLRRDGDIWLWPGT*IAVRVS Trigger: AGAGACCCTCACAGCGATCCAAGTACCTGGCCACAG...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TGGGACTGGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTTATTCTTTACCCCCCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT | + |
Preference number: 4 (lower is better) Translates to: WDWARVNGLGAGVFILYPPWYLL*PGTWIA Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...GGGGTAAAGAATAAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG | + |
Preference number: 4 (lower is better) Translates to: VLKSTSSGEPLRRDGDIWGGSHA*HGPWYL Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG | + |
Preference number: 4 (lower is better) Translates to: RVLKSTSSGEPLRRDGDIGGSHA*HGPWYL Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATATGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC | + |
Preference number: 4 (lower is better) Translates to: FWKFLPCFFSYPHVIVAICQSPA*AHPCHR Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR CAA 72 bp | CCTCAGGTCCACACAATCCAGGGCACAGTCAATCACTaGAGCTTTGGGAAGGATGGACTGTGGGTGGAGAAT | + |
Preference number: 4 (lower is better) Translates to: PQVHTIQGTVNH*SFGKDGLWVEN Trigger: ATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGATTGTGTGGACCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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CDS-3UTR GCA 90 bp | AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCATGGTCCATGGTACTTaGTGTGGCCAGGTACTTGGA | + |
Preference number: 4 (lower is better) Translates to: SLCSHTTSPRCISHSKTVMVHGT*CGQVLG Trigger: TCCAAGTACCTGGCCACAGCAAGTACCATGGACCAT...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACAATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC | + |
Preference number: 4 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTMPVSL*LGRKPC Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCGCTCGGAGCTCACCTTaGCAGAGCCCCGCTTGGGCG | + |
Preference number: 4 (lower is better) Translates to: IRYKHKLQTFPHLQRVRRARSSP*QSPAWA Trigger: CGCCCAAGCGGGGCTCTGGCAAGGTGAGCTCCGAGC...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR GCA 90 bp | ACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTGATCCTGTTAAGATTTTGGAAAGCGTaGCCTGGGCGTCGTAGGCCC | + |
Preference number: 4 (lower is better) Translates to: TYHKPPLYKPLQDCLILLRFWKA*PGRRRP Trigger: GGGCCTACGACGCCCAGGGCACGCTTTCCAAAATCT...TAACAGGATCAGACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGCCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT | + |
Preference number: 4 (lower is better) Translates to: VLKSTSSGEPLRRDGDIWPWYLL*PGTWIA Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG | + |
Preference number: 4 (lower is better) Translates to: GRKQRKPGPHSPLRHALWEEMDY*VFILGP Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR TCA 90 bp | GAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATGCCAGCCCAGATCTTCTTGGATGGTCTaGAGCTCGTCGGACTCTGAG | + |
Preference number: 4 (lower is better) Translates to: EYAFSEHSSWAAFECQPRSSWMV*SSSDSE Trigger: CTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAGA...TCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR GCA 90 bp | GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGGTTATTCTTTGGGTCTaGTGTGTGCTTGGAGTCTGT | + |
Preference number: 4 (lower is better) Translates to: GVPHREKSEDGVGVNLEGVILWV*CVLGVC Trigger: ACAGACTCCAAGCACACAGCAGACCCAAAGAATAAC...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CCA 90 bp | GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG | + |
Preference number: 4 (lower is better) Translates to: GVPHREKSEDGVGVNLEGEEMDY*VFILGP Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR GCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATATTAGCCAGGGTACCTTaGCAGAGCCCCGCTTGGGCG | + |
Preference number: 4 (lower is better) Translates to: FWKFLPCFFSYPHVIVAILARVP*QSPAWA Trigger: CGCCCAAGCGGGGCTCTGGCAAGGTACCCTGGCTAA...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACACCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT | + |
Preference number: 4 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTPWYLL*PGTWIA Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR CAA 72 bp | GCAACTTTCTTCAGAGATGGTTGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTC | + |
Preference number: 4 (lower is better) Translates to: ATFFRDGCGCWE*NSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 72 bp | CTTAAAAGATGTTGCACTCAGTTCCTTCCATGGGGTTaGATCCTAGGTGCTGCGTGCTCAGTGGCTGTCTTG | + |
Preference number: 4 (lower is better) Translates to: LKRCCTQFLPWG*ILGAACSVAVL Trigger: CAAGACAGCCACTGAGCACGCAGCACCTAGGATCAAACCCCATGGAAGGAACTGAGTGCAACATCTTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR CAA 72 bp | TATGTGGATCTTCAATATGCAGAATCTTCCCGGATCTaGCAGAGCAAGCAGCTCACGTGGGCAAACCCGGTA | + |
Preference number: 4 (lower is better) Translates to: YVDLQYAESSRI*QSKQLTWANPV Trigger: TACCGGGTTTGCCCACGTGAGCTGCTTGCTCTGCAAGATCCGGGAAGATTCTGCATATTGAAGATCCACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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CDS-3UTR GCA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATATAGTCGGAAGCTCTaGCTCCGTAGCCAAATCCTG | + |
Preference number: 4 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTYSRKL*LRSQIL Trigger: CAGGATTTGGCTACGGAGGCAGAGCTTCCGACTATA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG | + |
Preference number: 4 (lower is better) Translates to: RVLKSTSSGEPLRRDGDIEEMDY*VFILGP Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | GTTTTGTCATTGCGGCTGCACTCTGCCCTTTTGCCTCAAAGAACCACACCCAGGGCCAGATTTCCTTACTaGCCTTCTCAGCAGATAATT | + |
Preference number: 4 (lower is better) Translates to: VLSLRLHSALLPQRTTPRARFPY*PSQQII Trigger: AATTATCTGCTGAGAAGGCCAGTAAGGAAATCTGGC...CCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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3UTR CAA 72 bp | CACGGGCTCATGAGTAACCCACCCCAGATGTTGCCCTaGGAAACTAGACCATCTGCACAATTTTATCTTCTG | + |
Preference number: 4 (lower is better) Translates to: HGLMSNPPQMLP*ETRPSAQFYLL Trigger: CAGAAGATAAAATTGTGCAGATGGTCTAGTTTCCAAGGGCAACATCTGGGGTGGGTTACTCATGAGCCCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 72 bp | CTGAACCACGGGCTCATGAGTAACCCACCCCAGATGTaGCCCTTGGAAACTAGACCATCTGCACAATTTTAT | + |
Preference number: 4 (lower is better) Translates to: LNHGLMSNPPQM*PLETRPSAQFY Trigger: ATAAAATTGTGCAGATGGTCTAGTTTCCAAGGGCAACATCTGGGGTGGGTTACTCATGAGCCCGTGGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 72 bp | AGTTTTGACAACAGACACAACTTACAGGCAGAAAAGTaGCCCAGGCTGAGAGGGTACTCAAAGACCTGGGCT | + |
Preference number: 4 (lower is better) Translates to: SFDNRHNLQAEK*PRLRGYSKTWA Trigger: AGCCCAGGTCTTTGAGTACCCTCTCAGCCTGGGCAACTTTTCTGCCTGTAAGTTGTGTCTGTTGTCAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR GCA 90 bp | TCCCTCGAGATGAGTGCTTGGAAGCCACTACAATGTAAATCGGCCCTGGAAACAGTTATTCTTTGGGTCTaGTGTGTGCTTGGAGTCTGT | + |
Preference number: 4 (lower is better) Translates to: SLEMSAWKPLQCKSALETVILWV*CVLGVC Trigger: ACAGACTCCAAGCACACAGCAGACCCAAAGAATAAC...TGTTTCCAGGGCCGATTTACATTGTAGTGGCTTCCAAGCACTCATCTCGAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATAGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG | + |
Preference number: 4 (lower is better) Translates to: FWKFLPCFFSYPHVIVAIGGSHA*HGPWYL Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CCA 90 bp | ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCGAGGTCCCATTGTTCTaGATCGCATCTGCCTCCCCA | + |
Preference number: 4 (lower is better) Translates to: IRYKHKLQTFPHLQRVRREVPLF*IASASP Trigger: TGGGGAGGCAGATGCGATCCAGAACAATGGGACCTC...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 72 bp | GAACTTCCCAAGGAGCATGCGCACAGCAAAAAGACCTaGGAAGAATATGCCTTCTCAGAGCATTCTTCATGG | + |
Preference number: 4 (lower is better) Translates to: ELPKEHAHSKKT*EEYAFSEHSSW Trigger: CCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGTCTTTTTGCTGTGCGCATGCTCCTTGGGAAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 72 bp | CATCTCAGTCAAAAGCCTCTTGCGTTCGCCAGAGTTTaGACAACAGACACAACTTACAGGCAGAAAAGTTGC | + |
Preference number: 4 (lower is better) Translates to: HLSQKPLAFARV*TTDTTYRQKSC Trigger: GCAACTTTTCTGCCTGTAAGTTGTGTCTGTTGTCAAAACTCTGGCGAACGCAAGAGGCTTTTGACTGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR GCA 90 bp | ATTCTGTTAGCAAGTGAGACATATCCAGTGTTAATGACAAGTAGCGCTGACATCATGGTCCATGGTACTTaGTGTGGCCAGGTACTTGGA | + |
Preference number: 4 (lower is better) Translates to: ILLASETYPVLMTSSADIMVHGT*CGQVLG Trigger: TCCAAGTACCTGGCCACAGCAAGTACCATGGACCAT...GATGTCAGCGCTACTTGTCATTAACACTGGATATGTCTCACTTGCTAACAGAAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 72 bp | CTTGTTTTAATGGCCCATCCATATCTCTCCCAAGAGTaGCTCAGCTATCCAACAGAGAGATGGAAAAATGCC | + |
Preference number: 4 (lower is better) Translates to: LVLMAHPYLSQE*LSYPTERWKNA Trigger: GGCATTTTTCCATCTCTCTGTTGGATAGCTGAGCAACTCTTGGGAGAGATATGGATGGGCCATTAAAACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 72 bp | TCTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTaGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCA | + |
Preference number: 4 (lower is better) Translates to: SILCNFLQRWLW*LGIELRTSGRA Trigger: TGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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3UTR CAA 72 bp | TTGGACTCTATTCTTTGCAACTTTCTTCAGAGATGGTaGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGA | + |
Preference number: 4 (lower is better) Translates to: LDSILCNFLQRW*WLLGIELRTSG Trigger: TCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAGAGTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CCA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATAGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG | + |
Preference number: 4 (lower is better) Translates to: FWKFLPCFFSYPHVIVAIEEMDY*VFILGP Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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3UTR CAA 72 bp | AATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATaGTGGCGATACATTAATCGGTGTTATCTTAAACCC | + |
Preference number: 4 (lower is better) Translates to: NFFPAFSLTLTL*WRYINRCYLKP Trigger: GGGTTTAAGATAACACCGATTAATGTATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG | + |
Preference number: 5 (lower is better) Translates to: LPWRAAADHPTMRSGQRDLPEPR*GAPLSP Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACCTCGGCCCCCTTCCCTaGGGATGGAGGTGGTGTTCG | + |
Preference number: 5 (lower is better) Translates to: SSSSLERRPGQPCIQGSDLGPLP*GWRWCS Trigger: CGAACACCACCTCCATCCCAAGGGAAGGGGGCCGAG...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132369.3 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG | + |
Preference number: 5 (lower is better) Translates to: VCLSIRSAHGSWRGVPHRLPEPR*GAPLSP Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
||
CDS-3UTR CAA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG | + |
Preference number: 5 (lower is better) Translates to: SPRPALHPGQRLDSVTGTLPEPR*GAPLSP Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTTTAGCCAGGGTACCTaGCCAGAGCCCCGCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: SSSSLERRPGQPCIQGSDFSQGT*PEPRLG Trigger: GCCCAAGCGGGGCTCTGGCAAGGTACCCTGGCTAAA...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCTCGTGTGTGAGTCCTaGCCAGAGCCCCGCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: SPRPALHPGQRLDSVTGTLVCES*PEPRLG Trigger: GCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS-3UTR CAA 90 bp | AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCTCGTGTGTGAGTCCTaGCCAGAGCCCCGCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: KCPQGHPTLDSHSCPACALVCES*PEPRLG Trigger: GCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAG...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS-3UTR CAA 90 bp | GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTCTCGTGTGTGAGTCCTaGCCAGAGCCCCGCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: VCLSIRSAHGSWRGVPHRLVCES*PEPRLG Trigger: GCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAG...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS-3UTR CAA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCAGCTGTGGCCAGGTACTaGGATCGCTGTGAGGGTCTC | + |
Preference number: 5 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSAVARY*DRCEGL Trigger: GAGACCCTCACAGCGATCCAAGTACCTGGCCACAGC...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACCATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG | + |
Preference number: 5 (lower is better) Translates to: SSSSLERRPGQPCIQGSDHGPWY*LWPGTW Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | CTACACAGATGGACCTCAGGGGGCAGTCAGGATCCTCCAGATCTCAAGCGCCTCTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG | + |
Preference number: 5 (lower is better) Translates to: LHRWTSGGSQDPPDLKRLLPEPR*GAPLSP Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...GAGGCGCTTGAGATCTGGAGGATCCTGACTGCCCCCTGAGGTCCATCTGTGTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGGGTCTGCTGTGTGCTaGGAGTCTGTCACCGCCGTG | + |
Preference number: 5 (lower is better) Translates to: LRHALWLLGGVPVYPQCPGSAVC*ESVTAV Trigger: CACGGCGGTGACAGACTCCAAGCACACAGCAGACCC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CAA 90 bp | CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAACTCGTGTGTGAGTCCTaGCCAGAGCCCCGCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: PLPRSKSAGGVQGIAGLELVCES*PEPRLG Trigger: GCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAG...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS-3UTR CAA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGCTGTGGCCAGGTACTaGGATCGCTGTGAGGGTCTC | + |
Preference number: 5 (lower is better) Translates to: LRHALWLLGGVPVYPQCPAVARY*DRCEGL Trigger: GAGACCCTCACAGCGATCCAAGTACCTGGCCACAGC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTGCTGTGGCCAGGTACTaGGATCGCTGTGAGGGTCTC | + |
Preference number: 5 (lower is better) Translates to: KCPQGHPTLDSHSCPACAAVARY*DRCEGL Trigger: GAGACCCTCACAGCGATCCAAGTACCTGGCCACAGC...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACATTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG | + |
Preference number: 5 (lower is better) Translates to: HTAAALSGRSHGQGRSVTLPEPR*GAPLSP Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA | + |
Preference number: 5 (lower is better) Translates to: LPWRAAADHPTMRSGQRDYWVFI*GPAVLR Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCATCTTCCTCCCTTCCCTaGGGATGGAGGTGGTGTTCG | + |
Preference number: 5 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSSSSLP*GWRWCS Trigger: CGAACACCACCTCCATCCCAAGGGAAGGGAGGAAGA...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS TCA 90 bp | TGTGAGTCCTTGTACATGTGGCACAGCCCAGGACGGCTGCGGGCATaGGAGGGCAGAGGGCTCCGGCTCTGCTTTAGCCAGGGTACCTTG | + |
Preference number: 5 (lower is better) Translates to: CESLYMWHSPGRLRA*EGRGLRLCFSQGTL Trigger: CAAGGTACCCTGGCTAAAGCAGAGCCGGAGCCCTCTGCCCTCTCATGCCCGCAGCCGTCCTGGGCTGTGCCACATGTACAAGGACTCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062446.15 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS GCA 90 bp | CCCTGGGTCAGCTGGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTaGTGTGTGCTTGGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGT | + |
Preference number: 5 (lower is better) Translates to: PWVSWVGALPVILWV*CVLGVCHRRVLSRG Trigger: ACCTCGGCTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCACATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG | + |
Preference number: 5 (lower is better) Translates to: VSPGPPHSGLSQLPSLCSHGPWY*LWPGTW Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG | + |
Preference number: 5 (lower is better) Translates to: DSPWALRGNRVLKSTSSGLPEPR*GAPLSP Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCATACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA | + |
Preference number: 5 (lower is better) Translates to: LRHALWLLGGVPVYPQCPYWVFI*GPAVLR Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA | + |
Preference number: 5 (lower is better) Translates to: SPRPALHPGQRLDSVTGTYWVFI*GPAVLR Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | GGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGGGGTCTGCTGTGTGCTaGGAGTCTGTCACCGCCGTG | + |
Preference number: 5 (lower is better) Translates to: GLEAGSGVWVPSSLCFCPGSAVC*ESVTAV Trigger: CACGGCGGTGACAGACTCCAAGCACACAGCAGACCC...CGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACTCCCTGCCTCCAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS GCA 90 bp | CGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTGGGTGGGCGCCTTaGCAGTTATTCTTTGGGTCTGCTGTGTGCTTGGAGTCTGTCACC | + |
Preference number: 5 (lower is better) Translates to: RIKWGRFPGSAGWAP*QLFFGSAVCLESVT Trigger: GGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG | + |
Preference number: 5 (lower is better) Translates to: SPRPALHPGQRLDSVTGTHGPWY*LWPGTW Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCCCAGCTTAAAGATTTaGGAAAGCGTGCCCTGGGCG | + |
Preference number: 5 (lower is better) Translates to: KCPQGHPTLDSHSCPACAPSLKI*ESVPWA Trigger: CGCCCAGGGCACGCTTTCCAAAATCTTTAAGCTGGG...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS GCA 90 bp | TCAGCTGGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTaGTTGGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGTCCCATTG | + |
Preference number: 5 (lower is better) Translates to: SAGWAPCQLFFGSAV*LESVTAVSSAEVPL Trigger: CAATGGGACCTCGGCTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 90 bp | GAAAAGAGGCGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTGGGTaGGCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTGCTTGGAG | + |
Preference number: 5 (lower is better) Translates to: EKRRIKWGRFPGSAG*APCQLFFGSAVCLE Trigger: CTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCGCCTCTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 90 bp | TCGGGAAAAGAGGCGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTaGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTGCTT | + |
Preference number: 5 (lower is better) Translates to: SGKEADQVGAVPWVS*VGALPVILWVCCVL Trigger: AAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCGCCTCTTTTCCCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 90 bp | GTGAGCCGATTTATAGTCGGAAGCTCTGCCTCCGTAGCCAAATCCTaGCTTCTGCCCCTCGGCCCCCTTCCCTTGGGATGGAGGTGGTGT | + |
Preference number: 5 (lower is better) Translates to: VSRFIVGSSASVAKS*LLPLGPLPLGWRWC Trigger: ACACCACCTCCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGAGGCAGAGCTTCCGACTATAAATCGGCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132369.3 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGCTGTGGCCAGGTACTaGGATCGCTGTGAGGGTCTC | + |
Preference number: 5 (lower is better) Translates to: SSHTAAALSGRSHGQGRSAVARY*DRCEGL Trigger: GAGACCCTCACAGCGATCCAAGTACCTGGCCACAGC...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG | + |
Preference number: 5 (lower is better) Translates to: VLKSTSSGEPLRRDGDIWLPEPR*GAPLSP Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG | + |
Preference number: 5 (lower is better) Translates to: RVLKSTSSGEPLRRDGDILPEPR*GAPLSP Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGCTCGTGTGTGAGTCCTaGCCAGAGCCCCGCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: DSPWALRGNRVLKSTSSGLVCES*PEPRLG Trigger: GCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAG...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS GCA 90 bp | CCGCTAAAGAAGCGCCCGATGGAGTCAAGGATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGCCTGGCATGGTCCATGGTACTTGCT | + |
Preference number: 5 (lower is better) Translates to: PLKKRPMESRMPVSL*LGRKPCLAWSMVLA Trigger: AGCAAGTACCATGGACCATGCCAGGCATGGCTTCCTCCCAAGGCACAGAGACACGGGCATCCTTGACTCCATCGGGCGCTTCTTTAGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000091789.11 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS CCA 90 bp | TTGGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGTCCCATTGTTCTaGATCGCATCTGCCTCCCCAAACACATCACTGTCCTCTGAGGCC | + |
Preference number: 5 (lower is better) Translates to: LESVTAVSSAEVPLF*IASASPNTSLSSEA Trigger: GGCCTCAGAGGACAGTGATGTGTTTGGGGAGGCAGATGCGATCCAGAACAATGGGACCTCGGCTGAGGACACGGCGGTGACAGACTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | TGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTGGCACCCTGTCTTTGAAGGTGTaGTCCTCCCTTCCCGGGGCA | + |
Preference number: 5 (lower is better) Translates to: WGSFSTRVGHIAASPGGTLSLKV*SSLPGA Trigger: TGCCCCGGGAAGGGAGGACAACACCTTCAAAGACAG...GGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS TCA 90 bp | CTTCTTGGATGGTCTGAAGCTCGTCGGACTCTGAGGGCCTGTCTTTaGAGGTGTTGTCCTCCCTTCCCGGGGCATCTCGGGAAAAGAGGC | + |
Preference number: 5 (lower is better) Translates to: LLGWSEARRTLRACL*RCCPPFPGHLGKRG Trigger: GCCTCTTTTCCCGAGATGCCCCGGGAAGGGAGGACAACACCTTCAAAGACAGGCCCTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS TCA 90 bp | ACATCCAGGCCTCCGGAAGCTGCTGTGGGGTCTTCTTGGATGGTCTaGAGCTCGTCGGACTCTGAGGGCCTGTCTTTGAAGGTGTTGTCC | + |
Preference number: 5 (lower is better) Translates to: TSRPPEAAVGSSWMV*SSSDSEGLSLKVLS Trigger: GGACAACACCTTCAAAGACAGGCCCTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAGACCCCACAGCAGCTTCCGGAGGCCTGGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 90 bp | GCCTTGGGAGGAAGCCATGCCTGGCATGGTCCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCTGTGAGGGTCTCTTCTGTGATGCCA | + |
Preference number: 5 (lower is better) Translates to: ALGGSHAWHGPWYLL*PGTWIAVRVSSVMP Trigger: TGGCATCACAGAAGAGACCCTCACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCAGGCATGGCTTCCTCCCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000091789.11 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG | + |
Preference number: 5 (lower is better) Translates to: SSHTAAALSGRSHGQGRSHGPWY*LWPGTW Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACATACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA | + |
Preference number: 5 (lower is better) Translates to: HTAAALSGRSHGQGRSVTYWVFI*GPAVLR Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS CCA 90 bp | AGCCATGCCTGGCATGGTCCATGGTACTTGCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCTTCTGTGATGCCATCACATCCAGGC | + |
Preference number: 5 (lower is better) Translates to: SHAWHGPWYLLWPGT*IAVRVSSVMPSHPG Trigger: GCCTGGATGTGATGGCATCACAGAAGAGACCCTCACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCAGGCATGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA | + |
Preference number: 5 (lower is better) Translates to: RCAMSLDSPWALRGNRVLYWVFI*GPAVLR Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA | + |
Preference number: 5 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQYWVFI*GPAVLR Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA | + |
Preference number: 5 (lower is better) Translates to: DSPWALRGNRVLKSTSSGYWVFI*GPAVLR Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG | + |
Preference number: 5 (lower is better) Translates to: LRHALWLLGGVPVYPQCPGVTMF*KKWTTG Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGTCAGCCGAGGTCCCATaGTTCTGGATCGCATCTGCC | + |
Preference number: 5 (lower is better) Translates to: GVPHREKSEDGVGVNLEGSAEVP*FWIASA Trigger: GGCAGATGCGATCCAGAACAATGGGACCTCGGCTGA...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CAA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGAGCTGGGTGGGCGCCTaGCCAGTTATTCTTTGGGTC | + |
Preference number: 5 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQSWVGA*PVILWV Trigger: GACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCT...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS-3UTR CAA 90 bp | ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGCTGTCTTTGAAGGTGTaGTCCTCCCTTCCCGGGGCA | + |
Preference number: 5 (lower is better) Translates to: MDIIRLGFSAPHPWSVAQLSLKV*SSLPGA Trigger: TGCCCCGGGAAGGGAGGACAACACCTTCAAAGACAG...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS GCA 90 bp | CCTCCCCAAACACATCACTGTCCTCTGAGGCCGTCTGAGAAAGCTTaGCCACGCTTCTCTTCTTTCCAGCCTCTCCTCGGTGAATCTCTC | + |
Preference number: 5 (lower is better) Translates to: PPQTHHCPLRPSEKA*PRFSSFQPLLGESL Trigger: GAGAGATTCACCGAGGAGAGGCTGGAAAGAAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 90 bp | GTAGCCAAATCCTGGCTTCTGCCCCTCGGCCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATGGAC | + |
Preference number: 5 (lower is better) Translates to: VAKSWLLPLGPLPLG*RWCSRCHNVLEEMD Trigger: GTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAGCCAGGATTTGGCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132369.3 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTCATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG | + |
Preference number: 5 (lower is better) Translates to: RCAMSLDSPWALRGNRVLHGPWY*LWPGTW Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG | + |
Preference number: 5 (lower is better) Translates to: PLPRSKSAGGVQGIAGLEGVTMF*KKWTTG Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACTTGCCAGTTATTCTTaGGGTCTGCTGTGTGCTTGG | + |
Preference number: 5 (lower is better) Translates to: SSHTAAALSGRSHGQGRSLASYS*GLLCAW Trigger: CCAAGCACACAGCAGACCCAAAGAATAACTGGCAAG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047865.14 |
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CDS TCA 90 bp | CTGCGACTTCTGGGGCAGGGAGCCATAATGGGTAGTTCTCGTGTGTaGGTCCAAACACATCACTGTCCTCTGAGGCCGTCTGAGAAAGCT | + |
Preference number: 5 (lower is better) Translates to: LRLLGQGAIMGSSRV*VQTHHCPLRPSEKA Trigger: AGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGACTCACACACGAGAACTACCCATTATGGCTCCCTGCCCCAGAAGTCGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143506.8 |
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CDS-3UTR CAA 90 bp | TGGCCCATCCATATCTCTCCCAAGAGTTGCTCAGCTATCCAACAGAGAGATGGAGCTGTGGCCAGGTACTaGGATCGCTGTGAGGGTCTC | + |
Preference number: 5 (lower is better) Translates to: WPIHISPKSCSAIQQRDGAVARY*DRCEGL Trigger: GAGACCCTCACAGCGATCCAAGTACCTGGCCACAGC...TCCATCTCTCTGTTGGATAGCTGAGCAACTCTTGGGAGAGATATGGATGGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | ACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTGATCCTGTTATTTAGCCAGGGTACCTaGCCAGAGCCCCGCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: TYHKPPLYKPLQDCLILLFSQGT*PEPRLG Trigger: GCCCAAGCGGGGCTCTGGCAAGGTACCCTGGCTAAA...TAACAGGATCAGACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS TCA 90 bp | ATTGTTCTGGATCGCATCTGCCTCCCCAAACACATCACTGTCCTCTaGGGCCGTCTGAGAAAGCTTGCCCACGCTTCTCTTCTTTCCAGC | + |
Preference number: 5 (lower is better) Translates to: IVLDRICLPKHITVL*GRLRKLAHASLLSS Trigger: GCTGGAAAGAAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGGGAGGCAGATGCGATCCAGAACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 90 bp | AGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCGGCCGTGCTGCGACTTCTGGGGCAG | + |
Preference number: 5 (lower is better) Translates to: RWCSRCHNVLEEMDY*VFILGPAVLRLLGQ Trigger: CTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS CCA 90 bp | GACGTGGTGATCGCCCGGGACAAAGTCCTTCCCTTGGGATGGAGGTaGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATGGACTACTGG | + |
Preference number: 5 (lower is better) Translates to: DVVIARDKVLPLGWR*CSRCHNVLEEMDYW Trigger: CCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGACTTTGTCCCGGGCGATCACCACGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062446.15 ENSMUST00000080658.12 ENSMUST00000102812.12 |
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CDS-3UTR CAA 90 bp | TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG | + |
Preference number: 5 (lower is better) Translates to: SSHTAAALSGRSHGQGRSGVTMF*KKWTTG Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTCTTGCCAGTTATTCTTaGGGTCTGCTGTGTGCTTGG | + |
Preference number: 5 (lower is better) Translates to: FYRLGNPFLRGHSTASLSLASYS*GLLCAW Trigger: CCAAGCACACAGCAGACCCAAAGAATAACTGGCAAG...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCGGCTCGGAGCTCACCTaGCCAGAGCCCCGCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: IRYKHKLQTFPHLQRVRRGSELT*PEPRLG Trigger: GCCCAAGCGGGGCTCTGGCAAGGTGAGCTCCGAGCC...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTCCCAGCTTAAAGATTTaGGAAAGCGTGCCCTGGGCG | + |
Preference number: 5 (lower is better) Translates to: RVLKSTSSGEPLRRDGDIPSLKI*ESVPWA Trigger: CGCCCAGGGCACGCTTTCCAAAATCTTTAAGCTGGG...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS CCA 90 bp | TGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATaGACTACTGGGTTTTCATCTTGGGTCCGGCCGTGCTGCGACTTC | + |
Preference number: 5 (lower is better) Translates to: WDGGGVRGVTMFLKK*TTGFSSWVRPCCDF Trigger: GAAGTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | GAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATGCCAGCCCAGACATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG | + |
Preference number: 5 (lower is better) Translates to: EYAFSEHSSWAAFECQPRHGPWY*LWPGTW Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...TCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG | + |
Preference number: 5 (lower is better) Translates to: GRKQRKPGPHSPLRHALWGVTMF*KKWTTG Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS TCA 90 bp | TGTGAGGAAGAGAAAGAAACAGTGACGACAGAAACATTGACGTGGTaGTCGCCCGGGACAAAGTCCTTCCCTTGGGATGGAGGTGGTGTT | + |
Preference number: 5 (lower is better) Translates to: CEEEKETVTTETLTW*SPGTKSFPWDGGGV Trigger: AACACCACCTCCATCCCAAGGGAAGGACTTTGTCCCGGGCGATCACCACGTCAATGTTTCTGTCGTCACTGTTTCTTTCTCTTCCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062446.15 ENSMUST00000080658.12 ENSMUST00000102812.12 |
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CDS CCA 90 bp | GCACTCTCTCCGGAGAACCAAGAGCCCCATGCCAGATTTCCTTACTaGCCTTCTCAGCAGATAATTCTCTCTTTCCAGAGTGGTTTCCCA | + |
Preference number: 5 (lower is better) Translates to: ALSPENQEPHARFPY*PSQQIILSFQSGFP Trigger: TGGGAAACCACTCTGGAAAGAGAGAATTATCTGCTGAGAAGGCCAGTAAGGAAATCTGGCATGGGGCTCTTGGTTCTCCGGAGAGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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CDS-3UTR CAA 90 bp | GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACACATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG | + |
Preference number: 5 (lower is better) Translates to: ASVGLFGRSTEGMLNQKTHGPWY*LWPGTW Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG | + |
Preference number: 5 (lower is better) Translates to: RCAMSLDSPWALRGNRVLGVTMF*KKWTTG Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS GCA 90 bp | GACCTCCTCAAAAGCAGCACTCTCTCCGGAGAACCAAGAGCCCCATaGCAGATTTCCTTACTGGCCTTCTCAGCAGATAATTCTCTCTTT | + |
Preference number: 5 (lower is better) Translates to: DLLKSSTLSGEPRAP*QISLLAFSADNSLF Trigger: AAAGAGAGAATTATCTGCTGAGAAGGCCAGTAAGGAAATCTGGCATGGGGCTCTTGGTTCTCCGGAGAGAGTGCTGCTTTTGAGGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114676.8 |
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CDS-3UTR CAA 90 bp | CTTAAGGACCTTTGCAGTATAGGAAAACAAGCCCTGCTCCTCCCCATCTATAAAAGCTGGGTGGGCGCCTaGCCAGTTATTCTTTGGGTC | + |
Preference number: 5 (lower is better) Translates to: LKDLCSIGKQALLLPIYKSWVGA*PVILWV Trigger: GACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCT...TTTATAGATGGGGAGGAGCAGGGCTTGTTTTCCTATACTGCAAAGGTCCTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG | + |
Preference number: 5 (lower is better) Translates to: RVLKSTSSGEPLRRDGDIGVTMF*KKWTTG Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS CCA 90 bp | TTCTCTTCTTTCCAGCCTCTCCTCGGTGAATCTCTCCATCCTTACTaGCCTTCTCAGCAGATAATTCTCTCTTTCCAGAGTGGTTTCCCA | + |
Preference number: 5 (lower is better) Translates to: FSSFQPLLGESLHPY*PSQQIILSFQSGFP Trigger: TGGGAAACCACTCTGGAAAGAGAGAATTATCTGCTGAGAAGGCCAGTAAGGATGGAGAGATTCACCGAGGAGAGGCTGGAAAGAAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 ENSMUST00000143506.8 |
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CDS-3UTR CAA 90 bp | ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCTCAGCCGAGGTCCCATaGTTCTGGATCGCATCTGCC | + |
Preference number: 5 (lower is better) Translates to: IRYKHKLQTFPHLQRVRRSAEVP*FWIASA Trigger: GGCAGATGCGATCCAGAACAATGGGACCTCGGCTGA...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091789.11 |
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CDS-3UTR CAA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATACATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG | + |
Preference number: 5 (lower is better) Translates to: FWKFLPCFFSYPHVIVAIHGPWY*LWPGTW Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | ACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTGATCCTGTTAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG | + |
Preference number: 5 (lower is better) Translates to: TYHKPPLYKPLQDCLILLGVTMF*KKWTTG Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...TAACAGGATCAGACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000080658.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS-3UTR CAA 90 bp | TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATACCCAGCTTAAAGATTTaGGAAAGCGTGCCCTGGGCG | + |
Preference number: 5 (lower is better) Translates to: FWKFLPCFFSYPHVIVAIPSLKI*ESVPWA Trigger: CGCCCAGGGCACGCTTTCCAAAATCTTTAAGCTGGG...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS CCA 72 bp | GAGGCGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTaGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTGC | + |
Preference number: 6 (lower is better) Translates to: EADQVGAVPWVS*VGALPVILWVC Trigger: GCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CAA 72 bp | GTAGTTCTCGTGTGTGAGTCCTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCGCTAAAGAAGCGCCCG | + |
Preference number: 6 (lower is better) Translates to: VVLVCESLPEPR*GAPLSPLKKRP Trigger: CGGGCGCTTCTTTAGCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAGAACTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000047865.14 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000102812.12 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 |
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CDS CAA 90 bp | GGCGGTTCCCTGGGTCAGCTGGGTGGGCGCCTTGCCAGTTATTCTTaGGGTCTGCTGTGTGCTTGGAGTCTGTCACCGCCGTGTCCTCAG | + |
Preference number: 6 (lower is better) Translates to: GGSLGQLGGRLASYS*GLLCAWSLSPPCPQ Trigger: CTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS GCA 72 bp | TGGGGGCGGTTCCCTGGGTCAGCTGGGTGGGCGCCTTaGCAGTTATTCTTTGGGTCTGCTGTGTGCTTGGAG | + |
Preference number: 6 (lower is better) Translates to: WGRFPGSAGWAP*QLFFGSAVCLE Trigger: CTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 72 bp | CGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTGGGTaGGCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTG | + |
Preference number: 6 (lower is better) Translates to: RIKWGRFPGSAG*APCQLFFGSAV Trigger: CACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CAA 72 bp | GTGGGGGCGGTTCCCTGGGTCAGCTGGGTGGGCGCCTaGCCAGTTATTCTTTGGGTCTGCTGTGTGCTTGGA | + |
Preference number: 6 (lower is better) Translates to: VGAVPWVSWVGA*PVILWVCCVLG Trigger: TCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CAA 90 bp | GCGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTGGGTGGGCGCCTaGCCAGTTATTCTTTGGGTCTGCTGTGTGCTTGGAGTCTGTCAC | + |
Preference number: 6 (lower is better) Translates to: ADQVGAVPWVSWVGA*PVILWVCCVLGVCH Trigger: GTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS GCA 72 bp | AAGCGCCCGATGGAGTCAAGGATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGCCTGGCATGGTCCATG | + |
Preference number: 6 (lower is better) Translates to: KRPMESRMPVSL*LGRKPCLAWSM Trigger: CATGGACCATGCCAGGCATGGCTTCCTCCCAAGGCACAGAGACACGGGCATCCTTGACTCCATCGGGCGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000091789.11 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS CCA 72 bp | TCGGGAAAAGAGGCGGATCAAGTGGGGGCGGTTCCCTaGGTCAGCTGGGTGGGCGCCTTGCCAGTTATTCTT | + |
Preference number: 6 (lower is better) Translates to: SGKEADQVGAVP*VSWVGALPVIL Trigger: AAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCGCCTCTTTTCCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 72 bp | CCAGGCCTCCGGAAGCTGCTGTGGGGTCTTCTTGGATaGTCTGAAGCTCGTCGGACTCTGAGGGCCTGTCTT | + |
Preference number: 6 (lower is better) Translates to: PGLRKLLWGLLG*SEARRTLRACL Trigger: AAGACAGGCCCTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAGACCCCACAGCAGCTTCCGGAGGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CAA 90 bp | GCTGGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTGCTaGGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGTCCCATTGTTC | + |
Preference number: 6 (lower is better) Translates to: AGWAPCQLFFGSAVC*ESVTAVSSAEVPLF Trigger: GAACAATGGGACCTCGGCTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS GCA 72 bp | AGCTGGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTaGTGTGTGCTTGGAGTCTGTCACCGCCGTGTCCTC | + |
Preference number: 6 (lower is better) Translates to: SWVGALPVILWV*CVLGVCHRRVL Trigger: GAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 72 bp | GTCACCGCCGTGTCCTCAGCCGAGGTCCCATTGTTCTaGATCGCATCTGCCTCCCCAAACACATCACTGTCC | + |
Preference number: 6 (lower is better) Translates to: VTAVSSAEVPLF*IASASPNTSLS Trigger: GGACAGTGATGTGTTTGGGGAGGCAGATGCGATCCAGAACAATGGGACCTCGGCTGAGGACACGGCGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 72 bp | CGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTGCTTaGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGTCC | + |
Preference number: 6 (lower is better) Translates to: RLASYSLGLLCA*SLSPPCPQPRS Trigger: GGACCTCGGCTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 72 bp | TTTATAGTCGGAAGCTCTGCCTCCGTAGCCAAATCCTaGCTTCTGCCCCTCGGCCCCCTTCCCTTGGGATGG | + |
Preference number: 6 (lower is better) Translates to: FIVGSSASVAKS*LLPLGPLPLGW Trigger: CCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGAGGCAGAGCTTCCGACTATAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132369.3 ENSMUST00000153478.9 |
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CDS CAA 72 bp | GCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTGCTaGGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGTC | + |
Preference number: 6 (lower is better) Translates to: APCQLFFGSAVC*ESVTAVSSAEV Trigger: GACCTCGGCTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CAA 72 bp | AGCTCGTCGGACTCTGAGGGCCTGTCTTTGAAGGTGTaGTCCTCCCTTCCCGGGGCATCTCGGGAAAAGAGG | + |
Preference number: 6 (lower is better) Translates to: SSSDSEGLSLKV*SSLPGASREKR Trigger: CCTCTTTTCCCGAGATGCCCCGGGAAGGGAGGACAACACCTTCAAAGACAGGCCCTCAGAGTCCGACGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CAA 90 bp | GCCTCCGTAGCCAAATCCTGGCTTCTGCCCCTCGGCCCCCTTCCCTaGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAA | + |
Preference number: 6 (lower is better) Translates to: ASVAKSWLLPLGPLP*GWRWCSRCHNVLEE Trigger: TTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132369.3 ENSMUST00000153478.9 |
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CDS TCA 72 bp | CCTCCGGAAGCTGCTGTGGGGTCTTCTTGGATGGTCTaGAGCTCGTCGGACTCTGAGGGCCTGTCTTTGAAG | + |
Preference number: 6 (lower is better) Translates to: PPEAAVGSSWMV*SSSDSEGLSLK Trigger: CTTCAAAGACAGGCCCTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAGACCCCACAGCAGCTTCCGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 72 bp | TGTGCCTTGGGAGGAAGCCATGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGTACTTGGATCGCTGTG | + |
Preference number: 6 (lower is better) Translates to: CALGGSHAWHGP*YLLWPGTWIAV Trigger: CACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCAGGCATGGCTTCCTCCCAAGGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000091789.11 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS CCA 72 bp | TCCTGGCTTCTGCCCCTCGGCCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAA | + |
Preference number: 6 (lower is better) Translates to: SWLLPLGPLPLG*RWCSRCHNVLE Trigger: TTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAGCCAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132369.3 ENSMUST00000153478.9 |
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CDS CAA 72 bp | TTGGGAGGAAGCCATGCCTGGCATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGGATCGCTGTGAGGGTC | + |
Preference number: 6 (lower is better) Translates to: LGGSHAWHGPWY*LWPGTWIAVRV Trigger: GACCCTCACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCAGGCATGGCTTCCTCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000091789.11 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS TCA 72 bp | GCCTCCCCAAACACATCACTGTCCTCTGAGGCCGTCTaGGAAAGCTTGCCCACGCTTCTCTTCTTTCCAGCC | + |
Preference number: 6 (lower is better) Translates to: ASPNTSLSSEAV*ESLPTLLFFPA Trigger: GGCTGGAAAGAAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 72 bp | GGAAGCCATGCCTGGCATGGTCCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCTGTGAGGGTCTCTTCT | + |
Preference number: 6 (lower is better) Translates to: GSHAWHGPWYLL*PGTWIAVRVSS Trigger: AGAAGAGACCCTCACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCAGGCATGGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000091789.11 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS TCA 72 bp | TTTTGGAAAGCGTGCCCTGGGCGTCGTAGGCCCCCTTaGATCCCTTGTGAGCCGATTTATAGTCGGAAGCTC | + |
Preference number: 6 (lower is better) Translates to: FWKACPGRRRPP*IPCEPIYSRKL Trigger: GAGCTTCCGACTATAAATCGGCTCACAAGGGATTCAAGGGGGCCTACGACGCCCAGGGCACGCTTTCCAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000102812.12 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000142850.9 ENSMUST00000153478.9 |
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CDS TCA 72 bp | CTGGGGCAGGGAGCCATAATGGGTAGTTCTCGTGTGTaGGTCCAAACACATCACTGTCCTCTGAGGCCGTCT | + |
Preference number: 6 (lower is better) Translates to: LGQGAIMGSSRV*VQTHHCPLRPS Trigger: AGACGGCCTCAGAGGACAGTGATGTGTTTGGACTCACACACGAGAACTACCCATTATGGCTCCCTGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143506.8 |
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CDS GCA 72 bp | ACACATCACTGTCCTCTGAGGCCGTCTGAGAAAGCTTaGCCACGCTTCTCTTCTTTCCAGCCTCTCCTCGGT | + |
Preference number: 6 (lower is better) Translates to: THHCPLRPSEKA*PRFSSFQPLLG Trigger: ACCGAGGAGAGGCTGGAAAGAAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 ENSMUST00000143506.8 |
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CDS CCA 72 bp | TCTGCTGAGGGACAGGCCTCTCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAA | + |
Preference number: 6 (lower is better) Translates to: SAEGQASPLPLG*RWCSRCHNVLE Trigger: TTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGAGAGGCCTGTCCCTCAGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123251.9 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 |
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CDS CCA 72 bp | CTTCTGCCCCTCGGCCCCCTTCCCTTGGGATGGAGGTaGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATG | + |
Preference number: 6 (lower is better) Translates to: LLPLGPLPLGWR*CSRCHNVLEEM Trigger: CATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132369.3 ENSMUST00000153478.9 |
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CDS TCA 72 bp | GTGAGTCCAAACACATCACTGTCCTCTGAGGCCGTCTaGGAAAGCTTGCCCACGCTTCTCTTCTTTCCAGCC | + |
Preference number: 6 (lower is better) Translates to: VSPNTSLSSEAV*ESLPTLLFFPA Trigger: GGCTGGAAAGAAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143506.8 |
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CDS CCA 72 bp | ATGTTCTTGAAGAAATGGACTACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGACTTCTGGGGCAGGGAG | + |
Preference number: 6 (lower is better) Translates to: MFLKKWTTGFSS*VRPCCDFWGRE Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS CCA 72 bp | TGGCATGGTCCATGGTACTTGCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCTTCTGTGATGCCATCA | + |
Preference number: 6 (lower is better) Translates to: WHGPWYLLWPGT*IAVRVSSVMPS Trigger: TGATGGCATCACAGAAGAGACCCTCACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 |
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CDS CCA 72 bp | GAGGGACAGGCCTCTCCCCTTCCCTTGGGATGGAGGTaGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATG | + |
Preference number: 6 (lower is better) Translates to: EGQASPLPLGWR*CSRCHNVLEEM Trigger: CATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGAGAGGCCTGTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123251.9 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 |
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CDS CAA 72 bp | ATTGACGTGGTGATCGCCCGGGACAAAGTCCTTCCCTaGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTT | + |
Preference number: 6 (lower is better) Translates to: IDVVIARDKVLP*GWRWCSRCHNV Trigger: AACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGACTTTGTCCCGGGCGATCACCACGTCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062446.15 ENSMUST00000080658.12 ENSMUST00000102812.12 |
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CDS CAA 90 bp | CCCTTCCCTTGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGGTTTTCATCTTGGGTCCGGCCGTGC | + |
Preference number: 6 (lower is better) Translates to: PFPWDGGGVRGVTMF*KKWTTGFSSWVRPC Trigger: GCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000047865.14 ENSMUST00000075372.13 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS TCA 72 bp | TTGCCCACGCTTCTCTTCTTTCCAGCCTCTCCTCGGTaGATCTCTCCATCCTTACTGGCCTTCTCAGCAGAT | + |
Preference number: 6 (lower is better) Translates to: LPTLLFFPASPR*ISPSLLAFSAD Trigger: ATCTGCTGAGAAGGCCAGTAAGGATGGAGAGATTCACCGAGGAGAGGCTGGAAAGAAGAGAAGCGTGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 ENSMUST00000143506.8 |
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CDS TCA 72 bp | GTTCTCGTGTGTGAGTCCAAACACATCACTGTCCTCTaGGGCCGTCTGAGAAAGCTTGCCCACGCTTCTCTT | + |
Preference number: 6 (lower is better) Translates to: VLVCESKHITVL*GRLRKLAHASL Trigger: AAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGACTCACACACGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143506.8 |
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CDS CAA 72 bp | AATGTTCTTGAAGAAATGGACTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGACTTCTGGGGCAGGGA | + |
Preference number: 6 (lower is better) Translates to: NVLEEMDYWVFI*GPAVLRLLGQG Trigger: TCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS CAA 90 bp | AGGTGTCACAATGTTCTTGAAGAAATGGACTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGACTTCTGGGGCAGGGAGCCATAATG | + |
Preference number: 6 (lower is better) Translates to: RCHNVLEEMDYWVFI*GPAVLRLLGQGAIM Trigger: CATTATGGCTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |
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CDS CAA 90 bp | TCCTTCCCTTGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGGTTTTCATCTTGGGTCCGGCCGTGC | + |
Preference number: 6 (lower is better) Translates to: SFPWDGGGVRGVTMF*KKWTTGFSSWVRPC Trigger: GCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062446.15 ENSMUST00000080658.12 ENSMUST00000102812.12 |
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CDS CAA 90 bp | GACAGAAACATTGACGTGGTGATCGCCCGGGACAAAGTCCTTCCCTaGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAA | + |
Preference number: 6 (lower is better) Translates to: DRNIDVVIARDKVLP*GWRWCSRCHNVLEE Trigger: TTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGACTTTGTCCCGGGCGATCACCACGTCAATGTTTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062446.15 ENSMUST00000080658.12 ENSMUST00000102812.12 |
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CDS CCA 72 bp | ATCGCCCGGGACAAAGTCCTTCCCTTGGGATGGAGGTaGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATG | + |
Preference number: 6 (lower is better) Translates to: IARDKVLPLGWR*CSRCHNVLEEM Trigger: CATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGACTTTGTCCCGGGCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062446.15 ENSMUST00000080658.12 ENSMUST00000102812.12 |
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CDS CCA 72 bp | TTCCAGCCTCTCCTCGGTGAATCTCTCCATCCTTACTaGCCTTCTCAGCAGATAATTCTCTCTTTCCAGAGT | + |
Preference number: 6 (lower is better) Translates to: FQPLLGESLHPY*PSQQIILSFQS Trigger: ACTCTGGAAAGAGAGAATTATCTGCTGAGAAGGCCAGTAAGGATGGAGAGATTCACCGAGGAGAGGCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047865.14 ENSMUST00000091789.11 ENSMUST00000143506.8 |
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CDS CAA 72 bp | TGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGGTTTTCATCTTGGGTC | + |
Preference number: 6 (lower is better) Translates to: WDGGGVRGVTMF*KKWTTGFSSWV Trigger: GACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000047865.14 ENSMUST00000062446.15 ENSMUST00000075372.13 ENSMUST00000080658.12 ENSMUST00000102812.12 ENSMUST00000114674.11 ENSMUST00000123251.9 ENSMUST00000132369.3 ENSMUST00000133193.9 ENSMUST00000142850.9 ENSMUST00000152071.9 ENSMUST00000153478.9 |