RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MBP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041607

Ensembl transcript IDs: ENSMUST00000047865.14, ENSMUST00000062446.15, ENSMUST00000075372.13, ENSMUST00000080658.12, ENSMUST00000091789.11, ENSMUST00000102812.12, ENSMUST00000114674.11, ENSMUST00000114676.8, ENSMUST00000123251.9, ENSMUST00000132369.3, ENSMUST00000133193.9, ENSMUST00000142850.9, ENSMUST00000143506.8, ENSMUST00000152071.9, ENSMUST00000153478.9

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGGAGCTGGGGGTGGTGGCTCTGCATGGCACGGAGGCACCACGTaGCCGGGGAGGGAGGATGCAGGAGACAACATGACCAGAAGTCCC +
Preference number: 1 (lower is better)
Translates to: LGAGGGGSAWHGGTT*PGREDAGDNMTRSP
Trigger: GGGACTTCTGGTCATGTTGTCTCCTGCATCCTCCCTCCCCGGGCACGTGGTGCCTCCGTGCCATGCAGAGCCACCACCCCCAGCTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 90 bp TGGCTCTGCATGGCACGGAGGCACCACGTGCCCGGGGAGGGAGGATaGAGGAGACAACATGACCAGAAGTCCCACTGCAGGGTGAGGGAG +
Preference number: 1 (lower is better)
Translates to: WLCMARRHHVPGEGG*RRQHDQKSHCRVRE
Trigger: CTCCCTCACCCTGCAGTGGGACTTCTGGTCATGTTGTCTCCTGCATCCTCCCTCCCCGGGCACGTGGTGCCTCCGTGCCATGCAGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 90 bp ACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCATaGGAAGTGGCCAGAGGGACAGCACGAGGCCACCAGAGAACTCCT +
Preference number: 1 (lower is better)
Translates to: TNGHCHGELPLTTPP*EVARGTARGHQRTP
Trigger: AGGAGTTCTCTGGTGGCCTCGTGCTGTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 90 bp CCCGGGGAGGGAGGATGCAGGAGACAACATGACCAGAAGTCCCACTaGAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTGG +
Preference number: 1 (lower is better)
Translates to: PGEGGCRRQHDQKSH*RVREGAQSLPGSIW
Trigger: CCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCAGTGGGACTTCTGGTCATGTTGTCTCCTGCATCCTCCCTCCCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 90 bp GTGCGACGCCCATCACATTCCTATTCCAGTGTCAGTGGATGGCTGTaGCGACCGGCCGAGGCAGCAGAAAGGCAGAGTCAGAGACCAGGG +
Preference number: 1 (lower is better)
Translates to: VRRPSHSYSSVSGWL*RPAEAAERQSQRPG
Trigger: CCCTGGTCTCTGACTCTGCCTTTCTGCTGCCTCGGCCGGTCGGCACAGCCATCCACTGACACTGGAATAGGAATGTGATGGGCGTCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp GTGTCGATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTaGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGA +
Preference number: 1 (lower is better)
Translates to: VSMDIIRLGFSAPHP*SVAQASPASRAATR
Trigger: TCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CCA 90 bp TGGACTGGGTGCGGCTGTGTGCATGTGTGGGCTTGGCTACACAGATaGACCTCAGGGGGCAGTCAGGATCCTCCAGATCTCAAGCGCCTC +
Preference number: 1 (lower is better)
Translates to: WTGCGCVHVWAWLHR*TSGGSQDPPDLKRL
Trigger: GAGGCGCTTGAGATCTGGAGGATCCTGACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGCCCACACATGCACACAGCCGCACCCAGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 90 bp ATGAGAAGTGGCCAGAGGGACAGCACGAGGCCACCAGAGAACTCCTaGAGTCCCACTTCCAGATGCGCCATGTCCTTGGACTCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: MRSGQRDSTRPPENS*SPTSRCAMSLDSPW
Trigger: CCAGGGAGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACTGCAGGAGTTCTCTGGTGGCCTCGTGCTGTCCCTCTGGCCACTTCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 90 bp AGCACTGTCCGATCAGGGCTAGTATCTCAGACACAGGGACACGGTTaGTCTGCGATGGTGACTGGCCCAGTTCCACCTGCCCACCTCTCC +
Preference number: 1 (lower is better)
Translates to: STVRSGLVSQTQGHG*SAMVTGPVPPAHLS
Trigger: GGAGAGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATACTAGCCCTGATCGGACAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp GCTTCTGTCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATaGGCAAGGTCGTTCAGTCACACTGGAGGGCAAACACTCCCGTGG +
Preference number: 1 (lower is better)
Translates to: ASVQPYCSCAVWTKP*ARSFSHTGGQTLPW
Trigger: CCACGGGAGTGTTTGCCCTCCAGTGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGACAGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CCA 90 bp CAGAGGGTGCGACGCCCATCACATTCCTATTCCAGTGTCAGTGGATaGCTGTGCCGACCGGCCGAGGCAGCAGAAAGGCAGAGTCAGAGA +
Preference number: 1 (lower is better)
Translates to: QRVRRPSHSYSSVSG*LCRPAEAAERQSQR
Trigger: TCTCTGACTCTGCCTTTCTGCTGCCTCGGCCGGTCGGCACAGCCATCCACTGACACTGGAATAGGAATGTGATGGGCGTCGCACCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 90 bp TCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGTGTCCGTGCACCTaGACCTCCGGAGTCGAACAAGGTGCACGGGGAACAAGTCAGGGC +
Preference number: 1 (lower is better)
Translates to: SEDGVGVNLEGCPCT*TSGVEQGARGTSQG
Trigger: GCCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCGGAGGTTCAGGTGCACGGACACCCTTCCAAGTTCACCCCTACTCCATCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 90 bp TGTCCGATCAGGGCTAGTATCTCAGACACAGGGACACGGTTGCTCTaGGATGGTGACTGGCCCAGTTCCACCTGCCCACCTCTCCTTCCT +
Preference number: 1 (lower is better)
Translates to: CPIRASISDTGTRLL*DGDWPSSTCPPLLP
Trigger: AGGAAGGAGAGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATACTAGCCCTGATCGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 90 bp CGGCAAGCAATTAGCAGCCTGTACCCAGCAGAGAATGAGCACAGCTaGGGTTCGAAACCCGGAAGCACTGCGCAGAGGCAGGATCTGCTG +
Preference number: 1 (lower is better)
Translates to: RQAISSLYPAENEHS*GSKPGSTAQRQDLL
Trigger: CAGCAGATCCTGCCTCTGCGCAGTGCTTCCGGGTTTCGAACCTCAGCTGTGCTCATTCTCTGCTGGGTACAGGCTGCTAATTGCTTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp GGTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATaGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGG +
Preference number: 1 (lower is better)
Translates to: GYFSTEVSVYQWALP*RAAADHPTMRSGQR
Trigger: CCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CCA 90 bp GCAGTCCCGTGTGAGAAGGACAAAGGGAGCAAAACAAGTAGAAATTaGCTAAGTGGCGACCACGCCCACTCCACGCCCAATCCCCCAGGC +
Preference number: 1 (lower is better)
Translates to: AVPCEKDKGSKTSRN*LSGDHAHSTPNPPG
Trigger: GCCTGGGGGATTGGGCGTGGAGTGGGCGTGGTCGCCACTTAGCCAATTTCTACTTGTTTTGCTCCCTTTGTCCTTCTCACACGGGACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp CACTGCAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTaGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCA +
Preference number: 1 (lower is better)
Translates to: HCRVREGAQSLPGSI*GSFSTRVGHIAASP
Trigger: TGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp AGGAACCTTCCTATGATTTGTGTTCTGAGACGCTGGCTGGTGGCCTaGGGACTGTCCTGGGACTGGGCGAGAGTTAATGGGCTCGGAGCA +
Preference number: 1 (lower is better)
Translates to: RNLPMICVLRRWLVA*GLSWDWARVNGLGA
Trigger: TGCTCCGAGCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCATAGGAAGGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 90 bp AAACAACCAAGGACCTTCAATCAAAGAGGCTTGAACACCATGACCTaGCCCCTGCTGTGTGCCGGGGCAGGGAGCTTCCAGCAGCGGAAG +
Preference number: 1 (lower is better)
Translates to: KQPRTFNQRGLNTMT*PLLCAGAGSFQQRK
Trigger: CTTCCGCTGCTGGAAGCTCCCTGCCCCGGCACACAGCAGGGGTCAGGTCATGGTGTTCAAGCCTCTTTGATTGAAGGTCCTTGGTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp TGTGTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTaGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTTATTCTTTAC +
Preference number: 1 (lower is better)
Translates to: CVLRRWLVAWGLSWD*ARVNGLGAGVFILY
Trigger: GTAAAGAATAAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp CCTTCAAAGCCATCTCTTTGTGGTCCTGGGCCTCAGGGCAAGTCATaGGGAGTAGCAAGCCTTCTTAAGCTTGCTGGGAGGGCTGGGGTA +
Preference number: 1 (lower is better)
Translates to: PSKPSLCGPGPQGKS*GVASLLKLAGRAGV
Trigger: TACCCCAGCCCTCCCAGCAAGCTTAAGAAGGCTTGCTACTCCCCATGACTTGCCCTGAGGCCCAGGACCACAAAGAGATGGCTTTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 90 bp ATGATTTGTGTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCCTaGGACTGGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTTATT +
Preference number: 1 (lower is better)
Translates to: MICVLRRWLVAWGLS*DWARVNGLGAGVFI
Trigger: AATAAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp CTGGGTAGGAAGAGGAACCTTCCTATGATTTGTGTTCTGAGACGCTaGCTGGTGGCCTGGGGACTGTCCTGGGACTGGGCGAGAGTTAAT +
Preference number: 1 (lower is better)
Translates to: LGRKRNLPMICVLRR*LVAWGLSWDWARVN
Trigger: ATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCATAGGAAGGTTCCTCTTCCTACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp CCACACAATCCAGGGCACAGTCAATCACTTGAGCTTTGGGAAGGATaGACTGTGGGTGGAGAATATCCTGCGCACAGCATGGAGCTGCCA +
Preference number: 1 (lower is better)
Translates to: PHNPGHSQSLELWEG*TVGGEYPAHSMELP
Trigger: TGGCAGCTCCATGCTGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGATTGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 90 bp GCCTCAGGTCCACACAATCCAGGGCACAGTCAATCACTTGAGCTTTaGGAAGGATGGACTGTGGGTGGAGAATATCCTGCGCACAGCATG +
Preference number: 1 (lower is better)
Translates to: ASGPHNPGHSQSLEL*EGWTVGGEYPAHSM
Trigger: CATGCTGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGATTGTGTGGACCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 90 bp ATCCAGGGCACAGTCAATCACTTGAGCTTTGGGAAGGATGGACTGTaGGTGGAGAATATCCTGCGCACAGCATGGAGCTGCCAATCACCA +
Preference number: 1 (lower is better)
Translates to: IQGTVNHLSFGKDGL*VENILRTAWSCQSP
Trigger: TGGTGATTGGCAGCTCCATGCTGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 90 bp CATGGGAGATCCAGAGCGGCTGTCTCTTCCTCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATGGAC +
Preference number: 1 (lower is better)
Translates to: HGRSRAAVSSSLPLG*RWCSRCHNVLEEMD
Trigger: GTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGAGGAAGAGACAGCCGCTCTGGATCTCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143506.8
3UTR TCA 90 bp GCCGAGGCAGCAGAAAGGCAGAGTCAGAGACCAGGGACCCAGAACTaGCCAAGTGAGGCTACTCTGATTCACACGAGAAATCTCAAAAGT +
Preference number: 1 (lower is better)
Translates to: AEAAERQSQRPGTQN*PSEATLIHTRNLKS
Trigger: ACTTTTGAGATTTCTCGTGTGAATCAGAGTAGCCTCACTTGGTCAGTTCTGGGTCCCTGGTCTCTGACTCTGCCTTTCTGCTGCCTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 90 bp AGGTTCTATTTGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTaGATCTCCAGGTGGCACCCTGCAGGTGTGTTAGATGCACATCTT +
Preference number: 1 (lower is better)
Translates to: RFYLGILFHTGGSHS*ISRWHPAGVLDAHL
Trigger: AAGATGTGCATCTAACACACCTGCAGGGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCAAATAGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 90 bp GAGATTAAAGACGGAGCCAGAGAGAAACTCCCTGGGTTTTGTCATTaGGGCTGCACTCTGCCCTTTTGCCTCAAAGAACCACACCCAGGT +
Preference number: 1 (lower is better)
Translates to: EIKDGAREKLPGFCH*GCTLPFCLKEPHPG
Trigger: ACCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCTCTCTGGCTCCGTCTTTAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 90 bp GGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTaGCACCCTGCAGGTGTGTTAGATGCACATCTTAGAATGACATCA +
Preference number: 1 (lower is better)
Translates to: GILFHTGGSHSCISR*HPAGVLDAHLRMTS
Trigger: TGATGTCATTCTAAGATGTGCATCTAACACACCTGCAGGGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 90 bp CTTGGAAGAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTaGATGCCAGCCCAGAAAACGCACAAAGGCTGGGTGTTGTCCCCA +
Preference number: 1 (lower is better)
Translates to: LGRICLLRAFFMGCL*MPAQKTHKGWVLSP
Trigger: TGGGGACAACACCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 90 bp AGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGGATCCCTaGGTTCTCTCTTATCTGAAGGCAATGACAATGACGGTGGCACTA +
Preference number: 1 (lower is better)
Translates to: SGVWVPSSLCFCPDP*VLSYLKAMTMTVAL
Trigger: TAGTGCCACCGTCATTGTCATTGCCTTCAGATAAGAGAGAACTCAGGGATCCGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 90 bp CATTCATTCACCCCCACCAAACTACATAGGACAAAGAGGAAAGTTTaGTGGAGGTGCAGAGGTCAGTCGGCAGACCTCCTCGCCTCAATT +
Preference number: 1 (lower is better)
Translates to: HSFTPTKLHRTKRKV*WRCRGQSADLLASI
Trigger: AATTGAGGCGAGGAGGTCTGCCGACTGACCTCTGCACCTCCAGCAAACTTTCCTCTTTGTCCTATGTAGTTTGGTGGGGGTGAATGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 90 bp GAAGAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATaGCAGCCCAGAAAACGCACAAAGGCTGGGTGTTGTCCCCACATT +
Preference number: 1 (lower is better)
Translates to: EEYAFSEHSSWAAFE*QPRKRTKAGCCPHI
Trigger: AATGTGGGGACAACACCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 90 bp GAGAAACTCCCTGGGTTTTGTCATTGCGGCTGCACTCTGCCCTTTTaGCTCAAAGAACCACACCCAGGTTGTGAAATGGATCTTCCATTC +
Preference number: 1 (lower is better)
Translates to: EKLPGFCHCGCTLPF*LKEPHPGCEMDLPF
Trigger: GAATGGAAGATCCATTTCACAACCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR GCA 90 bp TCTCTCCCAAGAGTTGCTCAGCTATCCAACAGAGAGATGGAAAAATaGCATACACTTACAAGGTGGCAGCCACCTGACAGACAAACCCTG +
Preference number: 1 (lower is better)
Translates to: SLPRVAQLSNREMEK*HTLTRWQPPDRQTL
Trigger: CAGGGTTTGTCTGTCAGGTGGCTGCCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCTGTTGGATAGCTGAGCAACTCTTGGGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp AGCAAAAAGACCTTGGAAGAATATGCCTTCTCAGAGCATTCTTCATaGGCTGCCTTTGAATGCCAGCCCAGAAAACGCACAAAGGCTGGG +
Preference number: 1 (lower is better)
Translates to: SKKTLEEYAFSEHSS*AAFECQPRKRTKAG
Trigger: CCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGTCTTTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 90 bp AGCAGAAAGGCAGAGTCAGAGACCAGGGACCCAGAACTGACCAAGTaGGGCTACTCTGATTCACACGAGAAATCTCAAAAGTGTGAACTT +
Preference number: 1 (lower is better)
Translates to: SRKAESETRDPELTK*GYSDSHEKSQKCEL
Trigger: AAGTTCACACTTTTGAGATTTCTCGTGTGAATCAGAGTAGCCTCACTTGGTCAGTTCTGGGTCCCTGGTCTCTGACTCTGCCTTTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 90 bp TTATTTCAATATTCAAGAATAGTAGGTGCTTCTGTCCAGCCATACTaGAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGT +
Preference number: 1 (lower is better)
Translates to: LFQYSRIVGASVQPY*SCAVWTKPWARSFS
Trigger: ACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGACAGAAGCACCTACTATTCTTGAATATTGAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 90 bp TCACCTTTCACAGGATGGATGGCAAGTTTATCTGGAGCCTTCCGTTaGCACGGTAACAGTGAAGACAAAACTAACTGCAGAACGGAGATG +
Preference number: 1 (lower is better)
Translates to: SPFTGWMASLSGAFR*HGNSEDKTNCRTEM
Trigger: CATCTCCGTTCTGCAGTTAGTTTTGTCTTCACTGTTACCGTGGCAACGGAAGGCTCCAGATAAACTTGCCATCCATCCTGTGAAAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp CATCCATATCTCTCCCAAGAGTTGCTCAGCTATCCAACAGAGAGATaGAAAAATGCCATACACTTACAAGGTGGCAGCCACCTGACAGAC +
Preference number: 1 (lower is better)
Translates to: HPYLSQELLSYPTER*KNAIHLQGGSHLTD
Trigger: GTCTGTCAGGTGGCTGCCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCTGTTGGATAGCTGAGCAACTCTTGGGAGAGATATGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp TCTGTCCACTCTGGGAGAGCCATGGAACAACACATGAACACGCTATaGTTTTTCAACTTGAACCATGGCCACAAAACTGGTTCTAGACCC +
Preference number: 1 (lower is better)
Translates to: SVHSGRAMEQHMNTL*FFNLNHGHKTGSRP
Trigger: GGGTCTAGAACCAGTTTTGTGGCCATGGTTCAAGTTGAAAAACCATAGCGTGTTCATGTGTTGTTCCATGGCTCTCCCAGAGTGGACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 90 bp GAACCCTGGGAGTACTTCTTGGGCACTTCCACTGTGTCCTTCATGTaGCCTTTAATGTCACCTTTCACAGGATGGATGGCAAGTTTATCT +
Preference number: 1 (lower is better)
Translates to: EPWEYFLGTSTVSFM*PLMSPFTGWMASLS
Trigger: AGATAAACTTGCCATCCATCCTGTGAAAGGTGACATTAAAGGTCACATGAAGGACACAGTGGAAGTGCCCAAGAAGTACTCCCAGGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 90 bp GAAGGCGATACCGCTAAGTACAGACTGCAGGAATCTGGGGCAGCTTaGATTCTGTTAGCAAGTGAGACATATCCAGTGTTAATGACAAGT +
Preference number: 1 (lower is better)
Translates to: EGDTAKYRLQESGAA*ILLASETYPVLMTS
Trigger: ACTTGTCATTAACACTGGATATGTCTCACTTGCTAACAGAATTCAAGCTGCCCCAGATTCCTGCAGTCTGTACTTAGCGGTATCGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 90 bp TTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTaGGACGCCCATCACATTCCTATTCCAGTGTCAGTGGATGGCTGT +
Preference number: 1 (lower is better)
Translates to: LDTNTSYKHSHIYRG*DAHHIPIPVSVDGC
Trigger: ACAGCCATCCACTGACACTGGAATAGGAATGTGATGGGCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 90 bp AAAACACTAACATATCAAGAGTGCAGATGTCTCCCTGAATATATGTaGATCTTCAATATGCAGAATCTTCCCGGATCTTGCAGAGCAAGC +
Preference number: 1 (lower is better)
Translates to: KTLTYQECRCLPEYM*IFNMQNLPGSCRAS
Trigger: GCTTGCTCTGCAAGATCCGGGAAGATTCTGCATATTGAAGATCCACATATATTCAGGGAGACATCTGCACTCTTGATATGTTAGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 90 bp TCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTaGCGATACATTAATCGGTGTTATCTTAAACCCACACTCTACTCA +
Preference number: 1 (lower is better)
Translates to: SGNFFPAFSLTLTLL*RYINRCYLKPTLYS
Trigger: TGAGTAGAGTGTGGGTTTAAGATAACACCGATTAATGTATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR TCA 90 bp TGTTTAAAACAAAACACTAACATATCAAGAGTGCAGATGTCTCCCTaGATATATGTGGATCTTCAATATGCAGAATCTTCCCGGATCTTG +
Preference number: 1 (lower is better)
Translates to: CLKQNTNISRVQMSP*IYVDLQYAESSRIL
Trigger: CAAGATCCGGGAAGATTCTGCATATTGAAGATCCACATATATTCAGGGAGACATCTGCACTCTTGATATGTTAGTGTTTTGTTTTAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR CCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACCCAGTCGGGGTGCCGTaGGCCTGGCCCCACCGCGAT +
Preference number: 2 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDPVGVP*AWPHRD
Trigger: ATCGCGGTGGGGCCAGGCCCACGGCACCCCGACTGG...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCCAGTCGGGGTGCCGTaGGCCTGGCCCCACCGCGAT +
Preference number: 2 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTPVGVP*AWPHRD
Trigger: ATCGCGGTGGGGCCAGGCCCACGGCACCCCGACTGG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCATTTAACCAGTCGGGGTaGCGTGGGCCTGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSFNQSG*RGPGPT
Trigger: GGTGGGGCCAGGCCCACGGCACCCCGACTGGTTAAA...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTGTACCAATGGGCACTaGCATGGCGAGCTGCCGCTG +
Preference number: 2 (lower is better)
Translates to: SSSSLERRPGQPCIQGSDCTNGH*HGELPL
Trigger: CAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACA...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTTTAACCAGTCGGGGTaGCGTGGGCCTGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTFNQSG*RGPGPT
Trigger: GGTGGGGCCAGGCCCACGGCACCCCGACTGGTTAAA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACCCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDPVYPQ*PRKLEG
Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCACCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSPVYPQ*PRKLEG
Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTPVYPQ*PRKLEG
Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTCCTGTTGGGGCCATTaGCCAGCCCACTCGCCCCTT +
Preference number: 2 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTSCWGH*PAHSPL
Trigger: AAGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACGCCCAGGCCAGCCCTaGATCCAGGGCAGCGACTCG +
Preference number: 2 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSRPGQP*IQGSDS
Trigger: CGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTLRHAL*LLGGVP
Trigger: AGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR TCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCTGACCACCCCACCATaGGAAGTGGCCAGAGGGACA +
Preference number: 2 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTLTTPP*EVARGT
Trigger: TGTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCATTTAACCAGTCGGGGTaGCGTGGGCCTGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPFNQSG*RGPGPT
Trigger: GGTGGGGCCAGGCCCACGGCACCCCGACTGGTTAAA...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCAGCTGCCCAGCCTGTaGTCACATACCACAAGCCCC +
Preference number: 2 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTQLPSL*SHTTSP
Trigger: GGGGCTTGTGGTATGTGAGCACAGGCTGGGCAGCTG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGCCAGTCGGGGTGCCGTaGGCCTGGCCCCACCGCGAT +
Preference number: 2 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQPVGVP*AWPHRD
Trigger: ATCGCGGTGGGGCCAGGCCCACGGCACCCCGACTGG...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp TTCCCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGCTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: FPLPRSKSAGGVQGIAGLLRHAL*LLGGVP
Trigger: AGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG...CAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACAAAACAAAGGAAGCCTaGACCACACAGTCCCCTGCG +
Preference number: 2 (lower is better)
Translates to: SSSSLERRPGQPCIQGSDKTKEA*TTQSPA
Trigger: CGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTT...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR TCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACGCTCTGGGGAGCCACTaGGGAGAGATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDALGSH*GEMVTF
Trigger: AAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGC...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCATTTAACCAGTCGGGGTaGCGTGGGCCTGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSFNQSG*RGPGPT
Trigger: GGTGGGGCCAGGCCCACGGCACCCCGACTGGTTAAA...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCACGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPRSRTR*TGNKSG
Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACCTGGACTCTCACAGCTaGCCAGCCTGTGCTCACATA +
Preference number: 2 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDLDSHS*PACAHI
Trigger: TATGTGAGCACAGGCTGGGCAGCTGTGAGAGTCCAG...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCCCAGTCGGGGTGCCGTaGGCCTGGCCCCACCGCGAT +
Preference number: 2 (lower is better)
Translates to: SLCSHTTSPRCISHSKTVPVGVP*AWPHRD
Trigger: ATCGCGGTGGGGCCAGGCCCACGGCACCCCGACTGG...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCACTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPLRHAL*LLGGVP
Trigger: AGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp TGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTGGCACCGACACCAAGGGGCTCTaGTGGCCACGGGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: WGSFSTRVGHIAASPGGTDTKGL*WPRGRR
Trigger: TCTCCTGCCCCGTGGCCACCAGAGCCCCTTGGTGTC...GGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCGCTCTGGGGAGCCACTaGGGAGAGATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTALGSH*GEMVTF
Trigger: AAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGC...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACATTTAACCAGTCGGGGTaGCGTGGGCCTGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTFNQSG*RGPGPT
Trigger: GGTGGGGCCAGGCCCACGGCACCCCGACTGGTTAAA...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAACGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: PLPRSKSAGGVQGIAGLERSRTR*TGNKSG
Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSPVYPQ*PRKLEG
Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCACAGCTGCCCAGCCTGTaGTCACATACCACAAGCCCC +
Preference number: 2 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPQLPSL*SHTTSP
Trigger: GGGGCTTGTGGTATGTGAGCACAGGCTGGGCAGCTG...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCT +
Preference number: 2 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDSPTSR*AMSLDS
Trigger: AGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACT...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CAA 90 bp CAGCACTGTCCGATCAGGGCTAGTATCTCAGACACAGGGACACGGTaGCTCTGCGATGGTGACTGGCCCAGTTCCACCTGCCCACCTCTC +
Preference number: 2 (lower is better)
Translates to: QHCPIRASISDTGTR*LCDGDWPSSTCPPL
Trigger: GAGAGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATACTAGCCCTGATCGGACAGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGGAACAAGTCAGGGCTaGGAAGACCCCGAGAAAACT +
Preference number: 2 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPGTSQG*EDPEKT
Trigger: AGTTTTCTCGGGGTCTTCTCAGCCCTGACTTGTTCC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR TCA 90 bp AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTGGAACAAGTCAGGGCTaGGAAGACCCCGAGAAAACT +
Preference number: 2 (lower is better)
Translates to: KCPQGHPTLDSHSCPACAGTSQG*EDPEKT
Trigger: AGTTTTCTCGGGGTCTTCTCAGCCCTGACTTGTTCC...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR TCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACTGACCACCCCACCATaGGAAGTGGCCAGAGGGACA +
Preference number: 2 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSLTTPP*EVARGT
Trigger: TGTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR TCA 90 bp TGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTGGCACCGTTGCTCTGCGATGGTaGCTGGCCCAGTTCCACCTG +
Preference number: 2 (lower is better)
Translates to: WGSFSTRVGHIAASPGGTVALRW*LAQFHL
Trigger: CAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAAC...GGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCAAAACAAAGGAAGCCTaGACCACACAGTCCCCTGCG +
Preference number: 2 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTKTKEA*TTQSPA
Trigger: CGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTT...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAAGGGCCACCCCACTCTaGACTCTCACAGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTRATPL*TLTAAQ
Trigger: CTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCT...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CAA 90 bp TGTCCATCCCGGGCTGACTCTCTCCAGAGAGTCTCTGGGAAACTCTaGGCAAGTGGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGT +
Preference number: 2 (lower is better)
Translates to: CPSRADSLQRVSGKL*ASGLEAGSGVWVPS
Trigger: ACTAGGGACCCACACACCACTCCCTGCCTCCAGTCCACTTGCCAAGAGTTTCCCAGAGACTCTCTGGAGAGAGTCAGCCCGGGATGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAAGGAACAAGTCAGGGCTaGGAAGACCCCGAGAAAACT +
Preference number: 2 (lower is better)
Translates to: PLPRSKSAGGVQGIAGLEGTSQG*EDPEKT
Trigger: AGTTTTCTCGGGGTCTTCTCAGCCCTGACTTGTTCC...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSRSRTR*TGNKSG
Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTCCTGTTGGGGCCATTaGCCAGCCCACTCGCCCCTT +
Preference number: 2 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGSCWGH*PAHSPL
Trigger: AAGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp GGCTGGGGTATAACACAGCTGGCTGGCCTCAGGTCCACACAATCCAGGGCACAGCGCCTGTGCTCCAGATaGCTCTTGCTTTACACGTGG +
Preference number: 2 (lower is better)
Translates to: GWGITQLAGLRSTQSRAQRLCSR*LLLYTW
Trigger: CCACGTGTAAAGCAAGAGGCATCTGGAGCACAGGCG...CTGTGCCCTGGATTGTGTGGACCTGAGGCCAGCCAGCTGTGTTATACCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR CCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACACCAGTCGGGGTGCCGTaGGCCTGGCCCCACCGCGAT +
Preference number: 2 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTPVGVP*AWPHRD
Trigger: ATCGCGGTGGGGCCAGGCCCACGGCACCCCGACTGG...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGCTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQLRHAL*LLGGVP
Trigger: AGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGAGGGCCACCCCACTCTaGACTCTCACAGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQRATPL*TLTAAQ
Trigger: CTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCT...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGAGGGCCACCCCACTCTaGACTCTCACAGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGRATPL*TLTAAQ
Trigger: CTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCT...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCATCCTTGGACTCTCCCTaGGCTCTGAGAGGAAACAGG +
Preference number: 2 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPSLDSP*ALRGNR
Trigger: CCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGA...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACCCCACCATGAGAAGTaGCCAGAGGGACAGCACGAG +
Preference number: 2 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTPHHEK*PEGQHE
Trigger: CTCGTGCTGTCCCTCTGGCCACTTCTCATGGTGGGG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp GGCTGGGGTATAACACAGCTGGCTGGCCTCAGGTCCACACAATCCAGGGCACAGGGGAAGGATGGACTGTaGGTGGAGAATATCCTGCGC +
Preference number: 2 (lower is better)
Translates to: GWGITQLAGLRSTQSRAQGKDGL*VENILR
Trigger: GCGCAGGATATTCTCCACCCACAGTCCATCCTTCCC...CTGTGCCCTGGATTGTGTGGACCTGAGGCCAGCCAGCTGTGTTATACCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR TCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCAACTCTCCCTGGGCTCTaGGAGGAAACAGGGTTCTTA +
Preference number: 2 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPTLPGL*EETGFL
Trigger: TAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGT...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR TCA 90 bp GACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTGGGCGAGAGTTAATGGGCGAAAAGAATGTGATTTaGAGGCAGTCGATGGAGGGA +
Preference number: 2 (lower is better)
Translates to: DAGWWPGDCPGTGRELMGEKNVI*RQSMEG
Trigger: TCCCTCCATCGACTGCCTTCAAATCACATTCTTTTC...GCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTTTGAACACCATGACCTaGCCCCTGCTGTGTGCCGGG +
Preference number: 2 (lower is better)
Translates to: FYRLGNPFLRGHSTASLSLNTMT*PLLCAG
Trigger: CCCGGCACACAGCAGGGGTCAGGTCATGGTGTTCAA...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR GCA 90 bp GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGCGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: GRKQRKPGPHSPLRHALWRSRTR*TGNKSG
Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCCCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SLCSHTTSPRCISHSKTVPVYPQ*PRKLEG
Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGCAGCTGCCCAGCCTGTaGTCACATACCACAAGCCCC +
Preference number: 2 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGQLPSL*SHTTSP
Trigger: GGGGCTTGTGGTATGTGAGCACAGGCTGGGCAGCTG...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TGCAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTGGGGATCCTTTTGGCCCAGTTCCACCTaGCCACCTCTCCTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: CRVREGAQSLPGSIWGSFWPSST*PPLLPF
Trigger: GAAAGGAAGGAGAGGTGGGCAGGTGGAACTGGGCCA...AAAGGATCCCCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTGACGGTGCCAGTGTaGGGCTCTTTGGAAGGTCTA +
Preference number: 2 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSVTVPV*GSLEGL
Trigger: TAGACCTTCCAAAGAGCCCCACACTGGCACCGTCAC...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp GACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTGGGCGAGAGTTAATGGGCGCTCAAAGGTGTGGCTaGAGACTACAGCATTTTCAA +
Preference number: 2 (lower is better)
Translates to: DAGWWPGDCPGTGRELMGAQRCG*RLQHFQ
Trigger: TTGAAAATGCTGTAGTCTCCAGCCACACCTTTGAGC...GCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAGCTCTGGGGAGCCACTaGGGAGAGATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTALGSH*GEMVTF
Trigger: AAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGC...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR TCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAACTCTCCCTGGGCTCTaGGAGGAAACAGGGTTCTTA +
Preference number: 2 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSTLPGL*EETGFL
Trigger: TAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGT...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR TCA 90 bp TCCCTCGAGATGAGTGCTTGGAAGCCACTACAATGTAAATCGGCCCTGGAAACAGGGCCAGACTGCTGCTaGGACACCAAGGGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: SLEMSAWKPLQCKSALETGPDCC*DTKGLW
Trigger: CCAGAGCCCCTTGGTGTCTCAGCAGCAGTCTGGCCC...TGTTTCCAGGGCCGATTTACATTGTAGTGGCTTCCAAGCACTCATCTCGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp CTACACAGATGGACCTCAGGGGGCAGTCAGGATCCTCCAGATCTCAAGCGCCTCCCCTGGAAACAAGATTaGTGGATCAGGCTGAAGGCG +
Preference number: 2 (lower is better)
Translates to: LHRWTSGGSQDPPDLKRLPWKQD*WIRLKA
Trigger: CGCCTTCAGCCTGATCCATCAATCTTGTTTCCAGGG...GAGGCGCTTGAGATCTGGAGGATCCTGACTGCCCCCTGAGGTCCATCTGTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR GCA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGCGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQRSRTR*TGNKSG
Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTCCTGTCTATCCGCAGTaGCCACGGAAGCTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: RVLKSTSSGEPLRRDGDIPVYPQ*PRKLEG
Trigger: CCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGG...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACTGGACTCTCACAGCTaGCCAGCCTGTGCTCACATA +
Preference number: 2 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTLDSHS*PACAHI
Trigger: TATGTGAGCACAGGCTGGGCAGCTGTGAGAGTCCAG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTCCTGTTGGGGCCATTaGCCAGCCCACTCGCCCCTT +
Preference number: 2 (lower is better)
Translates to: RVLKSTSSGEPLRRDGDISCWGH*PAHSPL
Trigger: AAGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGA...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCT +
Preference number: 2 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSSPTSR*AMSLDS
Trigger: AGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACT...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp GACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTGGGCGAGAGTTAATGGGCGACCTTGGAAGAATATaGCTTCTCAGAGCATTCTTC +
Preference number: 2 (lower is better)
Translates to: DAGWWPGDCPGTGRELMGDLGRI*LLRAFF
Trigger: GAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGTC...GCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR GCA 90 bp GACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTGGGCGAGAGTTAATGGGCTTCCCAAGGAACATGTaGACAGTAAATGAACTTCCC +
Preference number: 2 (lower is better)
Translates to: DAGWWPGDCPGTGRELMGFPRNM*TVNELP
Trigger: GGGAAGTTCATTTACTGTGCACATGTTCCTTGGGAA...GCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGCTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: VLKSTSSGEPLRRDGDIWLRHAL*LLGGVP
Trigger: AGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CAA 90 bp CCACCAGAGAACTCCTGCAGTCCCACTTCCAGATGCGCCATGTCCTaGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGC +
Preference number: 2 (lower is better)
Translates to: PPENSCSPTSRCAMS*DSPWALRGNRVLKS
Trigger: GCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACTGCAGGAGTTCTCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR TCA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGGCTCTGGGGAGCCACTaGGGAGAGATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQALGSH*GEMVTF
Trigger: AAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGC...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGCAGCTGCCCAGCCTGTaGTCACATACCACAAGCCCC +
Preference number: 2 (lower is better)
Translates to: VLKSTSSGEPLRRDGDIWQLPSL*SHTTSP
Trigger: GGGGCTTGTGGTATGTGAGCACAGGCTGGGCAGCTG...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCT +
Preference number: 2 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTSPTSR*AMSLDS
Trigger: AGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACT...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTCCGTGGAGGGGCCTCTaGCCTACATCTCAGTCAAAA +
Preference number: 2 (lower is better)
Translates to: FYRLGNPFLRGHSTASLSPWRGL*PTSQSK
Trigger: TTTTGACTGAGATGTAGGGCAGAGGCCCCTCCACGG...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAAAAACAAAGGAAGCCTaGACCACACAGTCCCCTGCG +
Preference number: 2 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTKTKEA*TTQSPA
Trigger: CGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTT...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR TCA 90 bp TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTAATCGCAGTCCCGTGTaGGAAGGACAAAGGGAGCAA +
Preference number: 2 (lower is better)
Translates to: FYRLGNPFLRGHSTASLSNRSPV*EGQREQ
Trigger: TTGCTCCCTTTGTCCTTCTCACACGGGACTGCGATT...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp GAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATGCCAGCCCAGAAGAGGCAGGATCTGCTaGAGCCCCAGGCATAGGGCA +
Preference number: 2 (lower is better)
Translates to: EYAFSEHSSWAAFECQPRRGRIC*SPRHRA
Trigger: TGCCCTATGCCTGGGGCTTCAGCAGATCCTGCCTCT...TCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp TCTTTGCAAAAATGCACTCCGTGGAAGGCGCCTGTGCTCCAGATGCCTCTTGCTCTGTCTTGTGAACGTTaGGGTGTTGACTGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: SLQKCTPWKAPVLQMPLALSCER*GVDWEG
Trigger: GCCCTCCCAGTCAACACCTCAACGTTCACAAGACAG...AGCAAGAGGCATCTGGAGCACAGGCGCCTTCCACGGAGTGCATTTTTGCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR TCA 90 bp AGCAGGGCATCCTTCAAAGCCATCTCTTTGTGGTCCTGGGCCTCAGGGCAAGTCGCACAGTCAATCACTTaGGCTTTGGGAAGGATGGAC +
Preference number: 2 (lower is better)
Translates to: SRASFKAISLWSWASGQVAQSIT*ALGRMD
Trigger: GTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGC...GACTTGCCCTGAGGCCCAGGACCACAAAGAGATGGCTTTGAAGGATGCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR GCA 90 bp GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCGGAGTCGAACAAGGTaGACGGGGAACAAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: VIFPPRLVCTNGHCHGELRSRTR*TGNKSG
Trigger: CCCTGACTTGTTCCCCGTGCACCTTGTTCGACTCCG...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCT +
Preference number: 2 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQSPTSR*AMSLDS
Trigger: AGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACT...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TGCGGCTGTGTGCATGTGTGGGCTTGGCTACACAGATGGACCTCAGGGGGCAGTTGCCTCAAGTTAGGATaGAGAAGGCATTGCATTCCT +
Preference number: 2 (lower is better)
Translates to: CGCVHVWAWLHRWTSGGSCLKLG*RRHCIP
Trigger: AGGAATGCAATGCCTTCTGCATCCTAACTTGAGGCA...ACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGCCCACACATGCACACAGCCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACAAGGGCCACCCCACTCTaGACTCTCACAGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTRATPL*TLTAAQ
Trigger: CTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCT...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACAGTGTGGGGCTCTTTaGAAGGTCTACAGAAGGCAT +
Preference number: 2 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTQCGAL*KVYRRH
Trigger: ATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp CTGTGCCTTCTGGCTACTTCATCTTTCCTGCCCAGTTTAGGTCCTGTTCCTTCGGCTTGGCTACACAGATaGACCTCAGGGGGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: LCLLATSSFLPSLGPVPSAWLHR*TSGGSQ
Trigger: CTGACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGC...CGAAGGAACAGGACCTAAACTGGGCAGGAAAGATGAAGTAGCCAGAAGGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp GTTTTGTCATTGCGGCTGCACTCTGCCCTTTTGCCTCAAAGAACCACACCCAGGCAAAAATGCACTCCGTaGAAGGCGCCTGTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: VLSLRLHSALLPQRTTPRQKCTP*KAPVLQ
Trigger: CTGGAGCACAGGCGCCTTCCACGGAGTGCATTTTTG...CCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR GCA 90 bp GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCTGGACTCTCACAGCTaGCCAGCCTGTGCTCACATA +
Preference number: 2 (lower is better)
Translates to: VIFPPRLVCTNGHCHGELLDSHS*PACAHI
Trigger: TATGTGAGCACAGGCTGGGCAGCTGTGAGAGTCCAG...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATGTACCAATGGGCACTaGCATGGCGAGCTGCCGCTG +
Preference number: 2 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTCTNGH*HGELPL
Trigger: CAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACTAGGAGGCAGGGAATaGTTATTTTTCCACCGAGGT +
Preference number: 2 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTLGGRE*LFFHRG
Trigger: ACCTCGGTGGAAAAATAACCATTCCCTGCCTCCTAG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp TGCAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTGGGGATCCTTTGGGTACTCAAAGACCTaGGCTTGTTTTAATGGCCCA +
Preference number: 2 (lower is better)
Translates to: CRVREGAQSLPGSIWGSFGYSKT*ACFNGP
Trigger: TGGGCCATTAAAACAAGCCCAGGTCTTTGAGTACCC...AAAGGATCCCCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 90 bp CCTTGGAAGAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTaGAATGCCAGCCCAGAAAACGCACAAAGGCTGGGTGTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: PWKNMPSQSILHGLP*NASPENAQRLGVVP
Trigger: GGGGACAACACCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp GGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGTATGGTTTTTCAACTTaGACCATGGCCACAAAACTG +
Preference number: 2 (lower is better)
Translates to: GLEAGSGVWVPSSLCFCPYGFST*TMATKL
Trigger: CAGTTTTGTGGCCATGGTTCAAGTTGAAAAACCATA...CGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACTCCCTGCCTCCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp GTTTTGTCATTGCGGCTGCACTCTGCCCTTTTGCCTCAAAGAACCACACCCAGGACACATGGGTTCTTCTaGGCTAGTTGTGGAACGAGG +
Preference number: 2 (lower is better)
Translates to: VLSLRLHSALLPQRTTPRTHGFF*ASCGTR
Trigger: CCTCGTTCCACAACTAGCTCAGAAGAACCCATGTGT...CCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR GCA 90 bp GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCT +
Preference number: 2 (lower is better)
Translates to: VIFPPRLVCTNGHCHGELSPTSR*AMSLDS
Trigger: AGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACT...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp AGAACTCATCAGTGCAATGAGATTAAAGACGGAGCCAGAGAGAAACTCCCTGGGCGTGGAAGGCGCCTGTaGTCCAGATGCCTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: RTHQCNEIKDGAREKLPGRGRRL*SRCLLL
Trigger: AAGCAAGAGGCATCTGGAGCACAGGCGCCTTCCACG...CCCAGGGAGTTTCTCTCTGGCTCCGTCTTTAATCTCATTGCACTGATGAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR CCA 90 bp GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGAAAACAAAGGAAGCCTaGACCACACAGTCCCCTGCG +
Preference number: 2 (lower is better)
Translates to: VIFPPRLVCTNGHCHGELKTKEA*TTQSPA
Trigger: CGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTT...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGAAAACAAAGGAAGCCTaGACCACACAGTCCCCTGCG +
Preference number: 2 (lower is better)
Translates to: VLKSTSSGEPLRRDGDIWKTKEA*TTQSPA
Trigger: CGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTT...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGAGAGATGGTGACATTTaGCGGCCACACATATCTCCA +
Preference number: 2 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQRDGDI*RPHISP
Trigger: TGGAGATATGTGTGGCCGCCAAATGTCACCATCTCT...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAAACAAGATGCAGTATTaGGCTACATCAACCATCACC +
Preference number: 2 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSNKMQY*ATSTIT
Trigger: GGTGATGGTTGATGTAGCCCAATACTGCATCTTGTT...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp CTGTGCCTTCTGGCTACTTCATCTTTCCTGCCCAGTTTAGGTCCTGTTCCTTCGCCTCCTCGCCTCAATTaGACCATTGTTTCACAGCGG +
Preference number: 2 (lower is better)
Translates to: LCLLATSSFLPSLGPVPSPPRLN*TIVSQR
Trigger: CCGCTGTGAAACAATGGTCCAATTGAGGCGAGGAGG...CGAAGGAACAGGACCTAAACTGGGCAGGAAAGATGAAGTAGCCAGAAGGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCACCAAGGGGCTCTGGTaGCCACGGGGCAGGAGAGCC +
Preference number: 2 (lower is better)
Translates to: IRYKHKLQTFPHLQRVRRTKGLW*PRGRRA
Trigger: GGCTCTCCTGCCCCGTGGCCACCAGAGCCCCTTGGT...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR GCA 90 bp CTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTTGCTGGGAATTGAACTCACTGACCCCTGCTGTGTaGCGGGGCAGGGAGCTTCCA +
Preference number: 2 (lower is better)
Translates to: LFFATFFRDGCGCWELNSLTPAV*RGRELP
Trigger: TGGAAGCTCCCTGCCCCGGCACACAGCAGGGGTCAG...TGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATCCTTGGACTCTCCCTaGGCTCTGAGAGGAAACAGG +
Preference number: 2 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTSLDSP*ALRGNR
Trigger: CCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTCATCTCTCCAGCCTTTaGGACTTTCTTAAGGACCTT +
Preference number: 2 (lower is better)
Translates to: FYRLGNPFLRGHSTASLSHLSSL*DFLKDL
Trigger: AAGGTCCTTAAGAAAGTCCCAAAGGCTGGAGAGATG...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACAGGAACAAGTCAGGGCTaGGAAGACCCCGAGAAAACT +
Preference number: 2 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTGTSQG*EDPEKT
Trigger: AGTTTTCTCGGGGTCTTCTCAGCCCTGACTTGTTCC...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATATCCTGTTGGGGCCATTaGCCAGCCCACTCGCCCCTT +
Preference number: 2 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAISCWGH*PAHSPL
Trigger: AAGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGA...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACATGGAAATTTCTTCCCTaGTTTTTCTCTTACCCTCAC +
Preference number: 2 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTWKFLP*FFSYPH
Trigger: GTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCA...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp AGAACTCATCAGTGCAATGAGATTAAAGACGGAGCCAGAGAGAAACTCCCTGGGATCCTGCGCACAGCATaGAGCTGCCAATCACCAAGA +
Preference number: 2 (lower is better)
Translates to: RTHQCNEIKDGAREKLPGILRTA*SCQSPR
Trigger: TCTTGGTGATTGGCAGCTCCATGCTGTGCGCAGGAT...CCCAGGGAGTTTCTCTCTGGCTCCGTCTTTAATCTCATTGCACTGATGAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR TCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATACTGACCACCCCACCATaGGAAGTGGCCAGAGGGACA +
Preference number: 2 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAILTTPP*EVARGT
Trigger: TGTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAG...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATATGTACCAATGGGCACTaGCATGGCGAGCTGCCGCTG +
Preference number: 2 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAICTNGH*HGELPL
Trigger: CAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACA...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp GAACCTTCCTATGATTTGTGTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCAGAGAGATGGAAAAATaGCATACACTTACAAGGTGG +
Preference number: 2 (lower is better)
Translates to: EPSYDLCSETLAGGLGTVREMEK*HTLTRW
Trigger: CCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCT...GACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCATAGGAAGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp AATCACTTGAGCTTTGGGAAGGATGGACTGTGGGTGGAGAATATCCTGCGCACAACTCAGTTCCTTCCATaGGGTTTGATCCTAGGTGCT +
Preference number: 2 (lower is better)
Translates to: NHLSFGKDGLWVENILRTTQFLP*GLILGA
Trigger: AGCACCTAGGATCAAACCCCATGGAAGGAACTGAGT...TGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR TCA 90 bp TGGGACTGGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTTATTCTTTACCCCAATTGGAAAAGAATGTaGTTTGAAGGCAGTCGATGG +
Preference number: 2 (lower is better)
Translates to: WDWARVNGLGAGVFILYPNWKRM*FEGSRW
Trigger: CCATCGACTGCCTTCAAATCACATTCTTTTCCAATT...GGGGTAAAGAATAAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 90 bp AGACAAACCCTGAACCACGGGCTCATGAGTAACCCACCCCAGATGTaGCCCTTGGAAACTAGACCATCTGCACAATTTTATCTTCTGATA +
Preference number: 2 (lower is better)
Translates to: RQTLNHGLMSNPPQM*PLETRPSAQFYLLI
Trigger: TATCAGAAGATAAAATTGTGCAGATGGTCTAGTTTCCAAGGGCAACATCTGGGGTGGGTTACTCATGAGCCCGTGGTTCAGGGTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 90 bp CCTTTGGACTCTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTaGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCT +
Preference number: 2 (lower is better)
Translates to: PLDSILCNFLQRWLW*LGIELRTSGRAVSA
Trigger: AGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAGAGTCCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp CTGTGCCTTCTGGCTACTTCATCTTTCCTGCCCAGTTTAGGTCCTGTTCCTTCGCAGGGCATTTGCTTTTaGAACATCATGAAACACAAG +
Preference number: 2 (lower is better)
Translates to: LCLLATSSFLPSLGPVPSQGICF*NIMKHK
Trigger: CTTGTGTTTCATGATGTTTCAAAAGCAAATGCCCTG...CGAAGGAACAGGACCTAAACTGGGCAGGAAAGATGAAGTAGCCAGAAGGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR GCA 90 bp GCAATGAGATTAAAGACGGAGCCAGAGAGAAACTCCCTGGGTTTTGTCATTGCGGAGTGTGGAGTTCTTTaGAAAAATGCACTCCGTGGA +
Preference number: 2 (lower is better)
Translates to: AMRLKTEPERNSLGFVIAECGVL*KNALRG
Trigger: TCCACGGAGTGCATTTTTGCAAAGAACTCCACACTC...CGCAATGACAAAACCCAGGGAGTTTCTCTCTGGCTCCGTCTTTAATCTCATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR CCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATATCCTTGGACTCTCCCTaGGCTCTGAGAGGAAACAGG +
Preference number: 2 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAISLDSP*ALRGNR
Trigger: CCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGA...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATGGACATTATTAGACTaGGGTTCTCAGCTCCTCATC +
Preference number: 2 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTWTLLD*GSQLLI
Trigger: GATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATAGTGACGGTGCCAGTGTaGGGCTCTTTGGAAGGTCTA +
Preference number: 2 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAIVTVPV*GSLEGL
Trigger: TAGACCTTCCAAAGAGCCCCACACTGGCACCGTCAC...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp CTTAAGGACCTTTGCAGTATAGGAAAACAAGCCCTGCTCCTCCCCATCTATAAAAAGAGGAAAGTTTGCTaGAGGTGCAGAGGTCAGTCG +
Preference number: 2 (lower is better)
Translates to: LKDLCSIGKQALLLPIYKKRKVC*RCRGQS
Trigger: CGACTGACCTCTGCACCTCCAGCAAACTTTCCTCTT...TTTATAGATGGGGAGGAGCAGGGCTTGTTTTCCTATACTGCAAAGGTCCTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 90 bp ACCCTGAACCACGGGCTCATGAGTAACCCACCCCAGATGTTGCCCTaGGAAACTAGACCATCTGCACAATTTTATCTTCTGATACATTTT +
Preference number: 2 (lower is better)
Translates to: TLNHGLMSNPPQMLP*ETRPSAQFYLLIHF
Trigger: AAAATGTATCAGAAGATAAAATTGTGCAGATGGTCTAGTTTCCAAGGGCAACATCTGGGGTGGGTTACTCATGAGCCCGTGGTTCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 90 bp CTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACT +
Preference number: 2 (lower is better)
Translates to: LFFATFFRDGCGCWE*NSGPLEEQSVLLTT
Trigger: AGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 90 bp ACAGTAAATGAACTTCCCAAGGAGCATGCGCACAGCAAAAAGACCTaGGAAGAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTT +
Preference number: 2 (lower is better)
Translates to: TVNELPKEHAHSKKT*EEYAFSEHSSWAAF
Trigger: AAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGTCTTTTTGCTGTGCGCATGCTCCTTGGGAAGTTCATTTACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATAGGAACAAGTCAGGGCTaGGAAGACCCCGAGAAAACT +
Preference number: 2 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAIGTSQG*EDPEKT
Trigger: AGTTTTCTCGGGGTCTTCTCAGCCCTGACTTGTTCC...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR GCA 90 bp CTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTTGCTGGGAATTGAACTCAAAAGTTTGCTGGAGGTaGAGAGGTCAGTCGGCAGAC +
Preference number: 2 (lower is better)
Translates to: LFFATFFRDGCGCWELNSKVCWR*RGQSAD
Trigger: GTCTGCCGACTGACCTCTGCACCTCCAGCAAACTTT...TGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCCACATCTGTCCACTCTaGGAGAGCCATGGAACAACA +
Preference number: 2 (lower is better)
Translates to: IRYKHKLQTFPHLQRVRRHICPL*ESHGTT
Trigger: TGTTGTTCCATGGCTCTCCCAGAGTGGACAGATGTG...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR GCA 90 bp GAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATGCCAGCCCAGAAACTCTGTATGGAAATaGCATAACTCTATTCTGCAT +
Preference number: 2 (lower is better)
Translates to: EYAFSEHSSWAAFECQPRNSVWK*HNSILH
Trigger: ATGCAGAATAGAGTTATGGCATTTCCATACAGAGTT...TCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATACTAGGAGGCAGGGAATaGTTATTTTTCCACCGAGGT +
Preference number: 2 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAILGGRE*LFFHRG
Trigger: ACCTCGGTGGAAAAATAACCATTCCCTGCCTCCTAG...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CCA 90 bp ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCCTCAATGCTACATCCTaGGTGCCTCAAGTTAGGATG +
Preference number: 2 (lower is better)
Translates to: IRYKHKLQTFPHLQRVRRLNATS*VPQVRM
Trigger: CATCCTAACTTGAGGCACCCAGGATGTAGCATTGAG...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CCA 90 bp CTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTTGCTGGGAATTGAACTCAACCTTTGCCTATGCTTaGAATAAGCTTCAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: LFFATFFRDGCGCWELNSTFAYA*NKLQEG
Trigger: GCCCTCCTGAAGCTTATTCCAAGCATAGGCAAAGGT...TGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR TCA 90 bp ATTCTGTTAGCAAGTGAGACATATCCAGTGTTAATGACAAGTAGCGCTGACATCCGTTCGCCAGAGTTTTaGCAACAGACACAACTTACA +
Preference number: 2 (lower is better)
Translates to: ILLASETYPVLMTSSADIRSPEF*QQTQLT
Trigger: TGTAAGTTGTGTCTGTTGTCAAAACTCTGGCGAACG...GATGTCAGCGCTACTTGTCATTAACACTGGATATGTCTCACTTGCTAACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 90 bp TTTTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATaGTGGCGATACATTAATCGGTGTTATCTTAAACCCACACTCTAC +
Preference number: 2 (lower is better)
Translates to: FSGNFFPAFSLTLTL*WRYINRCYLKPTLY
Trigger: GTAGAGTGTGGGTTTAAGATAACACCGATTAATGTATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT +
Preference number: 3 (lower is better)
Translates to: SSSSLERRPGQPCIQGSDFLLGP*PSPLAP
Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 72 bp GGGGGTGGTGGCTCTGCATGGCACGGAGGCACCACGTaGCCGGGGAGGGAGGATGCAGGAGACAACATGACC +
Preference number: 3 (lower is better)
Translates to: GGGGSAWHGGTT*PGREDAGDNMT
Trigger: GGTCATGTTGTCTCCTGCATCCTCCCTCCCCGGGCACGTGGTGCCTCCGTGCCATGCAGAGCCACCACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp TGGGTGTTGTCCCCACATTCTGGGAGCTGGGGGTGGTaGCTCTGCATGGCACGGAGGCACCACGTGCCCGGG +
Preference number: 3 (lower is better)
Translates to: WVLSPHSGSWGW*LCMARRHHVPG
Trigger: CCCGGGCACGTGGTGCCTCCGTGCCATGCAGAGCCACCACCCCCAGCTCCCAGAATGTGGGGACAACACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CAA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT +
Preference number: 3 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDFLLGP*PSPLAP
Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACAGATGCGCCATGTCCTaGGACTCTCCCTGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: SSSSLERRPGQPCIQGSDRCAMS*DSPWAL
Trigger: CAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT +
Preference number: 3 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTFLLGP*PSPLAP
Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACGGAGTAGGGGTGAACTaGGAAGGGTGTCCGTGCACC +
Preference number: 3 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDGVGVN*EGCPCT
Trigger: GGTGCACGGACACCCTTCCAAGTTCACCCCTACTCC...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 72 bp ATGGCACGGAGGCACCACGTGCCCGGGGAGGGAGGATaGAGGAGACAACATGACCAGAAGTCCCACTGCAGG +
Preference number: 3 (lower is better)
Translates to: MARRHHVPGEGG*RRQHDQKSHCR
Trigger: CCTGCAGTGGGACTTCTGGTCATGTTGTCTCCTGCATCCTCCCTCCCCGGGCACGTGGTGCCTCCGTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp AAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTaGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGC +
Preference number: 3 (lower is better)
Translates to: KPGPHSPLRHAL*LLGGVPVYPQC
Trigger: GCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CCA 72 bp CACAAAGGCTGGGTGTTGTCCCCACATTCTGGGAGCTaGGGGTGGTGGCTCTGCATGGCACGGAGGCACCAC +
Preference number: 3 (lower is better)
Translates to: HKGWVLSPHSGS*GWWLCMARRHH
Trigger: GTGGTGCCTCCGTGCCATGCAGAGCCACCACCCCCAGCTCCCAGAATGTGGGGACAACACCCAGCCTTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp GTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCCTaGGACTGGGCGAGAGTTAATGGGCTCGGAGCAGGT +
Preference number: 3 (lower is better)
Translates to: VLRRWLVAWGLS*DWARVNGLGAG
Trigger: ACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CAA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGGAGTAGGGGTGAACTaGGAAGGGTGTCCGTGCACC +
Preference number: 3 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPGVGVN*EGCPCT
Trigger: GGTGCACGGACACCCTTCCAAGTTCACCCCTACTCC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR TCA 72 bp TGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTaGCCACCCCACCATGAGAAGTGGCCAGAGGGACAG +
Preference number: 3 (lower is better)
Translates to: CVPMGTAMASCR*PPHHEKWPEGQ
Trigger: CTGTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 72 bp GGCCAGAGGGACAGCACGAGGCCACCAGAGAACTCCTaGAGTCCCACTTCCAGATGCGCCATGTCCTTGGAC +
Preference number: 3 (lower is better)
Translates to: GQRDSTRPPENS*SPTSRCAMSLD
Trigger: GTCCAAGGACATGGCGCATCTGGAAGTGGGACTGCAGGAGTTCTCTGGTGGCCTCGTGCTGTCCCTCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 72 bp AAGAGGCTTGAACACCATGACCTGACCCCTGCTGTGTaGCGGGGCAGGGAGCTTCCAGCAGCGGAAGGTACC +
Preference number: 3 (lower is better)
Translates to: KRLEHHDLTPAV*RGRELPAAEGT
Trigger: GGTACCTTCCGCTGCTGGAAGCTCCCTGCCCCGGCACACAGCAGGGGTCAGGTCATGGTGTTCAAGCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp AGACGCTGGCTGGTGGCCTGGGGACTGTCCTGGGACTaGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTT +
Preference number: 3 (lower is better)
Translates to: RRWLVAWGLSWD*ARVNGLGAGVF
Trigger: AAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCAGGACAGTCCCCAGGCCACCAGCCAGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp ACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATaGTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCC +
Preference number: 3 (lower is better)
Translates to: TKEAWTTQSPAP*SLAPWRCACLS
Trigger: GGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 72 bp GGAGGATGCAGGAGACAACATGACCAGAAGTCCCACTaGAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGT +
Preference number: 3 (lower is better)
Translates to: GGCRRQHDQKSH*RVREGAQSLPG
Trigger: ACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCAGTGGGACTTCTGGTCATGTTGTCTCCTGCATCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp GACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTaGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: DIIRLGFSAPHP*SVAQASPASRA
Trigger: TGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CCA 72 bp TTCCTGCCCAGTTTAGGTCCTGTTCCTTCGGCTGCCTaGACTGGGTGCGGCTGTGTGCATGTGTGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: FLPSLGPVPSAA*TGCGCVHVWAW
Trigger: CCAAGCCCACACATGCACACAGCCGCACCCAGTCCAGGCAGCCGAAGGAACAGGACCTAAACTGGGCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp CGACGCCCATCACATTCCTATTCCAGTGTCAGTGGATaGCTGTGCCGACCGGCCGAGGCAGCAGAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: RRPSHSYSSVSG*LCRPAEAAERQ
Trigger: CTGCCTTTCTGCTGCCTCGGCCGGTCGGCACAGCCATCCACTGACACTGGAATAGGAATGTGATGGGCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CAA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGGAGTAGGGGTGAACTaGGAAGGGTGTCCGTGCACC +
Preference number: 3 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSGVGVN*EGCPCT
Trigger: GGTGCACGGACACCCTTCCAAGTTCACCCCTACTCC...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT +
Preference number: 3 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGFLLGP*PSPLAP
Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT +
Preference number: 3 (lower is better)
Translates to: RCAMSLDSPWALRGNRVLFLLGP*PSPLAP
Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGTTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT +
Preference number: 3 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQFLLGP*PSPLAP
Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp TGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTGGCACCGACACAGGGACACGGTaGCTCTGCGATGGTGACTGG +
Preference number: 3 (lower is better)
Translates to: WGSFSTRVGHIAASPGGTDTGTR*LCDGDW
Trigger: CCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTC...GGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp TATCTCAGACACAGGGACACGGTTGCTCTGCGATGGTaGCTGGCCCAGTTCCACCTGCCCACCTCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: YLRHRDTVALRW*LAQFHLPTSPS
Trigger: GGAAGGAGAGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp CCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTaGTCACATACCACAAGCCCCCGTTGTATAAGCCAC +
Preference number: 3 (lower is better)
Translates to: PPHSGLSQLPSL*SHTTSPRCISH
Trigger: GTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 72 bp AGGCCACCAGAGAACTCCTGCAGTCCCACTTCCAGATaGGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGA +
Preference number: 3 (lower is better)
Translates to: RPPENSCSPTSR*AMSLDSPWALR
Trigger: TCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACTGCAGGAGTTCTCTGGTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 72 bp AGGGCTAGTATCTCAGACACAGGGACACGGTTGCTCTaGGATGGTGACTGGCCCAGTTCCACCTGCCCACCT +
Preference number: 3 (lower is better)
Translates to: RASISDTGTRLL*DGDWPSSTCPP
Trigger: AGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATACTAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp CGATCAGGGCTAGTATCTCAGACACAGGGACACGGTTaGTCTGCGATGGTGACTGGCCCAGTTCCACCTGCC +
Preference number: 3 (lower is better)
Translates to: RSGLVSQTQGHG*SAMVTGPVPPA
Trigger: GGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGAGATACTAGCCCTGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp TCAGACACAGGGACACGGTTGCTCTGCGATGGTGACTaGCCCAGTTCCACCTGCCCACCTCTCCTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: SDTGTRLLCDGD*PSSTCPPLLPF
Trigger: GAAAGGAAGGAGAGGTGGGCAGGTGGAACTGGGCCAGTCACCATCGCAGAGCAACCGTGTCCCTGTGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp TGCGGCTGTGTGCATGTGTGGGCTTGGCTACACAGATaGACCTCAGGGGGCAGTCAGGATCCTCCAGATCTC +
Preference number: 3 (lower is better)
Translates to: CGCVHVWAWLHR*TSGGSQDPPDL
Trigger: GAGATCTGGAGGATCCTGACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGCCCACACATGCACACAGCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CAA 90 bp GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGGGAGTAGGGGTGAACTaGGAAGGGTGTCCGTGCACC +
Preference number: 3 (lower is better)
Translates to: GRKQRKPGPHSPLRHALWGVGVN*EGCPCT
Trigger: GGTGCACGGACACCCTTCCAAGTTCACCCCTACTCC...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAAGATGCGCCATGTCCTaGGACTCTCCCTGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTRCAMS*DSPWAL
Trigger: CAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACCAGTGTGGGGCTCTTaGGAAGGTCTACAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSPVWGS*EGLQKA
Trigger: TGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR TCA 72 bp AGGACCTTCAATCAAAGAGGCTTGAACACCATGACCTaGCCCCTGCTGTGTGCCGGGGCAGGGAGCTTCCAG +
Preference number: 3 (lower is better)
Translates to: RTFNQRGLNTMT*PLLCAGAGSFQ
Trigger: CTGGAAGCTCCCTGCCCCGGCACACAGCAGGGGTCAGGTCATGGTGTTCAAGCCTCTTTGATTGAAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp CCATCACATTCCTATTCCAGTGTCAGTGGATGGCTGTaGCGACCGGCCGAGGCAGCAGAAAGGCAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: PSHSYSSVSGWL*RPAEAAERQSQ
Trigger: CTGACTCTGCCTTTCTGCTGCCTCGGCCGGTCGGCACAGCCATCCACTGACACTGGAATAGGAATGTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp CAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATaGGCAAGGTCGTTCAGTCACACTGGAGGGCAAACA +
Preference number: 3 (lower is better)
Translates to: QPYCSCAVWTKP*ARSFSHTGGQT
Trigger: TGTTTGCCCTCCAGTGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CCA 72 bp CCTCACAGCCTCATAAGGCCTGGGCATTCTACAGGCTaGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCT +
Preference number: 3 (lower is better)
Translates to: PHSLIRPGHSTG*ETRSLEATAQP
Trigger: AGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAATGCCCAGGCCTTATGAGGCTGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CAA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACCAGTGTGGGGCTCTTaGGAAGGTCTACAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTPVWGS*EGLQKA
Trigger: TGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp GGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGCAGAGATGGTTGTGGTaGCTGGGAATTGAACTCAGG +
Preference number: 3 (lower is better)
Translates to: GLEAGSGVWVPSSLCFCPQRWLW*LGIELR
Trigger: CCTGAGTTCAATTCCCAGCAACCACAACCATCTCTG...CGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACTCCCTGCCTCCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp AAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTaGCATTTGGCGGCCACACATATCTCCAGCGTGTTC +
Preference number: 3 (lower is better)
Translates to: KHQLWGATEERW*HLAATHISSVF
Trigger: GAACACGCTGGAGATATGTGTGGCCGCCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR TCA 72 bp CGAAACCCGGAAGCACTGCGCAGAGGCAGGATCTGCTaGAGCCCCAGGCATAGGGCATGTATACCTAAGAAC +
Preference number: 3 (lower is better)
Translates to: RNPEALRRGRIC*SPRHRACIPKN
Trigger: GTTCTTAGGTATACATGCCCTATGCCTGGGGCTTCAGCAGATCCTGCCTCTGCGCAGTGCTTCCGGGTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp GCTCCTCCCTCGACAGCATCTGAGTGTGGAGTTCTTTaGAAAAATGCACTCCGTGGAAGGCGCCTGTGCTCC +
Preference number: 3 (lower is better)
Translates to: APPSTASECGVL*KNALRGRRLCS
Trigger: GGAGCACAGGCGCCTTCCACGGAGTGCATTTTTGCAAAGAACTCCACACTCAGATGCTGTCGAGGGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 72 bp GTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTaGGGATCCTTTTCCACACGGGTGGGTCACATAGCT +
Preference number: 3 (lower is better)
Translates to: VREGAQSLPGSI*GSFSTRVGHIA
Trigger: AGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp CCATCTCTTTGTGGTCCTGGGCCTCAGGGCAAGTCATaGGGAGTAGCAAGCCTTCTTAAGCTTGCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: PSLCGPGPQGKS*GVASLLKLAGR
Trigger: CCTCCCAGCAAGCTTAAGAAGGCTTGCTACTCCCCATGACTTGCCCTGAGGCCCAGGACCACAAAGAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR-3UTR CAA 90 bp AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTGGAGTAGGGGTGAACTaGGAAGGGTGTCCGTGCACC +
Preference number: 3 (lower is better)
Translates to: RVLKSTSSGEPLRRDGDIGVGVN*EGCPCT
Trigger: GGTGCACGGACACCCTTCCAAGTTCACCCCTACTCC...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATTCCTGTTGGGGCCATaGCCCAGCCCACTCGCCCCT +
Preference number: 3 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTFLLGP*PSPLAP
Trigger: AGGGGCGAGTGGGCTGGGCAATGGCCCCAACAGGAA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR-3UTR CAA 90 bp CAGGGCATCCTTCAAAGCCATCTCTTTGTGGTCCTGGGCCTCAGGGCAAGTCATCAAGCCTTCTTAAGCTaGCTGGGAGGGCTGGGGTAT +
Preference number: 3 (lower is better)
Translates to: QGILQSHLFVVLGLRASHQAFLS*LGGLGY
Trigger: ATACCCCAGCCCTCCCAGCAAGCTTAAGAAGGCTTG...ATGACTTGCCCTGAGGCCCAGGACCACAAAGAGATGGCTTTGAAGGATGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR TCA 72 bp CCAGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTaGGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: PDAPCPWTLPGL*EETGFLKAPAL
Trigger: CAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 72 bp TTGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTaGATCTCCAGGTGGCACCCTGCAGGTGTGTTAGAT +
Preference number: 3 (lower is better)
Translates to: LGILFHTGGSHS*ISRWHPAGVLD
Trigger: ATCTAACACACCTGCAGGGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp AGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTaGCGGCCACACATATCTCCAGCGTGTTCTCCTAAG +
Preference number: 3 (lower is better)
Translates to: SSGEPLRRDGDI*RPHISPACSPK
Trigger: CTTAGGAGAACACGCTGGAGATATGTGTGGCCGCCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CCA 72 bp CCCACTTCCAGATGCGCCATGTCCTTGGACTCTCCCTaGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACC +
Preference number: 3 (lower is better)
Translates to: PTSRCAMSLDSP*ALRGNRVLKST
Trigger: GGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCTGGAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CCA 72 bp AGAGGGATAAGGAGGTGTCGATGGACATTATTAGACTaGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCC +
Preference number: 3 (lower is better)
Translates to: RGIRRCRWTLLD*GSQLLIPGASP
Trigger: GGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CCA 72 bp CCCACCAAACTACATAGGACAAAGAGGAAAGTTTGCTaGAGGTGCAGAGGTCAGTCGGCAGACCTCCTCGCC +
Preference number: 3 (lower is better)
Translates to: PTKLHRTKRKVC*RCRGQSADLLA
Trigger: GGCGAGGAGGTCTGCCGACTGACCTCTGCACCTCCAGCAAACTTTCCTCTTTGTCCTATGTAGTTTGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp TATCTCAGCAGGGCATCCTTCAAAGCCATCTCTTTGTaGTCCTGGGCCTCAGGGCAAGTCATGGGGAGTAGC +
Preference number: 3 (lower is better)
Translates to: YLSRASFKAISL*SWASGQVMGSS
Trigger: GCTACTCCCCATGACTTGCCCTGAGGCCCAGGACCACAAAGAGATGGCTTTGAAGGATGCCCTGCTGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR TCA 72 bp TCAGGATCCTCCAGATCTCAAGCGCCTCCCTCGAGATaGGTGCTTGGAAGCCACTACAATGTAAATCGGCCC +
Preference number: 3 (lower is better)
Translates to: SGSSRSQAPPSR*VLGSHYNVNRP
Trigger: GGGCCGATTTACATTGTAGTGGCTTCCAAGCACTCATCTCGAGGGAGGCGCTTGAGATCTGGAGGATCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp GCCAGAGAGAAACTCCCTGGGTTTTGTCATTGCGGCTaGACTCTGCCCTTTTGCCTCAAAGAACCACACCCA +
Preference number: 3 (lower is better)
Translates to: AREKLPGFCHCG*TLPFCLKEPHP
Trigger: TGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCTCTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR GCA 72 bp GACGGAGCCAGAGAGAAACTCCCTGGGTTTTGTCATTaGGGCTGCACTCTGCCCTTTTGCCTCAAAGAACCA +
Preference number: 3 (lower is better)
Translates to: DGAREKLPGFCH*GCTLPFCLKEP
Trigger: TGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCTCTCTGGCTCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 72 bp GGCAGTCGATGGAGGGAAAGGCACATCTGTCCACTCTaGGAGAGCCATGGAACAACACATGAACACGCTATG +
Preference number: 3 (lower is better)
Translates to: GSRWRERHICPL*ESHGTTHEHAM
Trigger: CATAGCGTGTTCATGTGTTGTTCCATGGCTCTCCCAGAGTGGACAGATGTGCCTTTCCCTCCATCGACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp TTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTaGCACCCTGCAGGTGTGTTAGATGCACATCTTAGA +
Preference number: 3 (lower is better)
Translates to: FHTGGSHSCISR*HPAGVLDAHLR
Trigger: TCTAAGATGTGCATCTAACACACCTGCAGGGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp GGCAATGACAATGACGGTGGCACTAGACTGGAACCCTaGGAGTACTTCTTGGGCACTTCCACTGTGTCCTTC +
Preference number: 3 (lower is better)
Translates to: GNDNDGGTRLEP*EYFLGTSTVSF
Trigger: GAAGGACACAGTGGAAGTGCCCAAGAAGTACTCCCAGGGTTCCAGTCTAGTGCCACCGTCATTGTCATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp TCCAGAGCGGCTGTCTCTTCCTCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAA +
Preference number: 3 (lower is better)
Translates to: SRAAVSSSLPLG*RWCSRCHNVLE
Trigger: TTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGAGGAAGAGACAGCCGCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143506.8
3UTR TCA 72 bp ACAGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTaGGGAGAGATGGTGACATTTGGCGGCCACACATAT +
Preference number: 3 (lower is better)
Translates to: TGFLKAPALGSH*GEMVTFGGHTY
Trigger: ATATGTGTGGCCGCCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR TCA 72 bp AACTTGGACACAGATGTTAGTGTGTCCATCCCGGGCTaGCTCTCTCCAGAGAGTCTCTGGGAAACTCTTGGC +
Preference number: 3 (lower is better)
Translates to: NLDTDVSVSIPG*LSPESLWETLG
Trigger: GCCAAGAGTTTCCCAGAGACTCTCTGGAGAGAGTCAGCCCGGGATGGACACACTAACATCTGTGTCCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp TATTCAAGAATAGTAGGTGCTTCTGTCCAGCCATACTaGAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGG +
Preference number: 3 (lower is better)
Translates to: YSRIVGASVQPY*SCAVWTKPWAR
Trigger: CCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGACAGAAGCACCTACTATTCTTGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR GCA 72 bp GCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATaGCAGCCCAGAAAACGCACAAAGGCTGGGTGTTGT +
Preference number: 3 (lower is better)
Translates to: AFSEHSSWAAFE*QPRKRTKAGCC
Trigger: ACAACACCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp CCACAGCACAGCCTCCCTTTCTTCCCAAGGAACATGTaGACAGTAAATGAACTTCCCAAGGAGCATGCGCAC +
Preference number: 3 (lower is better)
Translates to: PQHSLPFFPRNM*TVNELPKEHAH
Trigger: GTGCGCATGCTCCTTGGGAAGTTCATTTACTGTGCACATGTTCCTTGGGAAGAAAGGGAGGCTGTGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp TTGCACTCAGTTCCTTCCATGGGGTTTGATCCTAGGTaGTGCGTGCTCAGTGGCTGTCTTGTGAACGTTGAG +
Preference number: 3 (lower is better)
Translates to: LHSVPSMGFDPR*CVLSGCLVNVE
Trigger: CTCAACGTTCACAAGACAGCCACTGAGCACGCAGCACCTAGGATCAAACCCCATGGAAGGAACTGAGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR GCA 72 bp CACTCCGTGGAAGGCGCCTGTGCTCCAGATGCCTCTTaGTTTACACGTGGTGATAGAAATCAAACCACAACG +
Preference number: 3 (lower is better)
Translates to: HSVEGACAPDAS*FTRGDRNQTTT
Trigger: CGTTGTGGTTTGATTTCTATCACCACGTGTAAAGCAAGAGGCATCTGGAGCACAGGCGCCTTCCACGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR GCA 72 bp GCTTTGGGAAGGATGGACTGTGGGTGGAGAATATCCTaGGCACAGCATGGAGCTGCCAATCACCAAGATCAA +
Preference number: 3 (lower is better)
Translates to: ALGRMDCGWRIS*AQHGAANHQDQ
Trigger: TTGATCTTGGTGATTGGCAGCTCCATGCTGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR GCA 72 bp AGAAACTCCCTGGGTTTTGTCATTGCGGCTGCACTCTaGCCTTTTGCCTCAAAGAACCACACCCAGGTTGTG +
Preference number: 3 (lower is better)
Translates to: RNSLGFVIAAAL*PFASKNHTQVV
Trigger: CACAACCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 72 bp CTCCAGATCTCAAGCGCCTCCCTCGAGATGAGTGCTTaGAAGCCACTACAATGTAAATCGGCCCTGGAAACA +
Preference number: 3 (lower is better)
Translates to: LQISSASLEMSA*KPLQCKSALET
Trigger: TGTTTCCAGGGCCGATTTACATTGTAGTGGCTTCCAAGCACTCATCTCGAGGGAGGCGCTTGAGATCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp TACCCCAAAGCCATAACCTCACAGCCTCATAAGGCCTaGGCATTCTACAGGCTGGGAAACCCGTTCCTTAGA +
Preference number: 3 (lower is better)
Translates to: YPKAITSQPHKA*AFYRLGNPFLR
Trigger: TCTAAGGAACGGGTTTCCCAGCCTGTAGAATGCCCAGGCCTTATGAGGCTGTGAGGTTATGGCTTTGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp CCGGACCTTAAAAGATGTTGCACTCAGTTCCTTCCATaGGGTTTGATCCTAGGTGCTGCGTGCTCAGTGGCT +
Preference number: 3 (lower is better)
Translates to: PDLKRCCTQFLP*GLILGAACSVA
Trigger: AGCCACTGAGCACGCAGCACCTAGGATCAAACCCCATGGAAGGAACTGAGTGCAACATCTTTTAAGGTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 72 bp ACAGTCAATCACTTGAGCTTTGGGAAGGATGGACTGTaGGTGGAGAATATCCTGCGCACAGCATGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: TVNHLSFGKDGL*VENILRTAWSC
Trigger: GCAGCTCCATGCTGTGCGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 72 bp CCACACAATCCAGGGCACAGTCAATCACTTGAGCTTTaGGAAGGATGGACTGTGGGTGGAGAATATCCTGCG +
Preference number: 3 (lower is better)
Translates to: PHNPGHSQSLEL*EGWTVGGEYPA
Trigger: CGCAGGATATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGATTGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 72 bp GCGGCTGTCTCTTCCTCCCTTCCCTTGGGATGGAGGTaGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATG +
Preference number: 3 (lower is better)
Translates to: AAVSSSLPLGWR*CSRCHNVLEEM
Trigger: CATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGAGGAAGAGACAGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143506.8
3UTR-3UTR CAA 90 bp AGAACTCATCAGTGCAATGAGATTAAAGACGGAGCCAGAGAGAAACTCCCTGGGTTCCTTCCATGGGGTTaGATCCTAGGTGCTGCGTGC +
Preference number: 3 (lower is better)
Translates to: RTHQCNEIKDGAREKLPGFLPWG*ILGAAC
Trigger: GCACGCAGCACCTAGGATCAAACCCCATGGAAGGAA...CCCAGGGAGTTTCTCTCTGGCTCCGTCTTTAATCTCATTGCACTGATGAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR TCA 72 bp AGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTaGGCCATCTCTCCAGCCTTTGGGACTTTCTTAAGG +
Preference number: 3 (lower is better)
Translates to: RTSGRAVSALNH*AISPAFGTFLR
Trigger: CCTTAAGAAAGTCCCAAAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp ATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTaGATGCCAGCCCAGAAAACGCACAAAGGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: ICLLRAFFMGCL*MPAQKTHKGWV
Trigger: CACCCAGCCTTTGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp GCAGAAAGGCAGAGTCAGAGACCAGGGACCCAGAACTaGCCAAGTGAGGCTACTCTGATTCACACGAGAAAT +
Preference number: 3 (lower is better)
Translates to: AERQSQRPGTQN*PSEATLIHTRN
Trigger: ATTTCTCGTGTGAATCAGAGTAGCCTCACTTGGTCAGTTCTGGGTCCCTGGTCTCTGACTCTGCCTTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp CTCAGGTCCACACAATCCAGGGCACAGTCAATCACTTaGGCTTTGGGAAGGATGGACTGTGGGTGGAGAATA +
Preference number: 3 (lower is better)
Translates to: LRSTQSRAQSIT*ALGRMDCGWRI
Trigger: TATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGATTGTGTGGACCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR GCA 72 bp GTGACACTACATGATCAGCTTAGGTCCTCCGTCGGATaGTACTTGCTCTGGGTAGGAAGAGGAACCTTCCTA +
Preference number: 3 (lower is better)
Translates to: VTLHDQLRSSVG*YLLWVGRGTFL
Trigger: TAGGAAGGTTCCTCTTCCTACCCAGAGCAAGTAGCATCCGACGGAGGACCTAAGCTGATCATGTAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp CCTGGGTTTTGTCATTGCGGCTGCACTCTGCCCTTTTaGCTCAAAGAACCACACCCAGGTTGTGAAATGGAT +
Preference number: 3 (lower is better)
Translates to: PGFCHCGCTLPF*LKEPHPGCEMD
Trigger: ATCCATTTCACAACCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 72 bp CCTCCCCCTCCTGGGAGACTGGAAGATGTTTTCTTGTaGCACCTGTGTTGTCTGGATGTGACACTACATGAT +
Preference number: 3 (lower is better)
Translates to: PPPPGRLEDVFL*HLCCLDVTLHD
Trigger: ATCATGTAGTGTCACATCCAGACAACACAGGTGCCACAAGAAAACATCTTCCAGTCTCCCAGGAGGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp TATCTGAAGGCAATGACAATGACGGTGGCACTAGACTaGAACCCTGGGAGTACTTCTTGGGCACTTCCACTG +
Preference number: 3 (lower is better)
Translates to: YLKAMTMTVALD*NPGSTSWALPL
Trigger: CAGTGGAAGTGCCCAAGAAGTACTCCCAGGGTTCCAGTCTAGTGCCACCGTCATTGTCATTGCCTTCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CAA 90 bp GAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATGCCAGCCCAGAGACAAAGAGGAAAGTTaGCTGGAGGTGCAGAGGTCA +
Preference number: 3 (lower is better)
Translates to: EYAFSEHSSWAAFECQPRDKEES*LEVQRS
Trigger: TGACCTCTGCACCTCCAGCAAACTTTCCTCTTTGTC...TCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CAA 90 bp TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTCACAGCAAAAAGACCTaGGAAGAATATGCCTTCTCA +
Preference number: 3 (lower is better)
Translates to: FYRLGNPFLRGHSTASLSHSKKT*EEYAFS
Trigger: TGAGAAGGCATATTCTTCCAAGGTCTTTTTGCTGTG...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp TGGGTCCCTAGTTCTCTTTGCTTCTGCCCGGATCCCTaGGTTCTCTCTTATCTGAAGGCAATGACAATGACG +
Preference number: 3 (lower is better)
Translates to: WVPSSLCFCPDP*VLSYLKAMTMT
Trigger: CGTCATTGTCATTGCCTTCAGATAAGAGAGAACTCAGGGATCCGGGCAGAAGCAAAGAGAACTAGGGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp GCAGAGTCAGAGACCAGGGACCCAGAACTGACCAAGTaGGGCTACTCTGATTCACACGAGAAATCTCAAAAG +
Preference number: 3 (lower is better)
Translates to: AESETRDPELTK*GYSDSHEKSQK
Trigger: CTTTTGAGATTTCTCGTGTGAATCAGAGTAGCCTCACTTGGTCAGTTCTGGGTCCCTGGTCTCTGACTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp AACAGAGAGATGGAAAAATGCCATACACTTACAAGGTaGCAGCCACCTGACAGACAAACCCTGAACCACGGG +
Preference number: 3 (lower is better)
Translates to: NREMEKCHTLTR*QPPDRQTLNHG
Trigger: CCCGTGGTTCAGGGTTTGTCTGTCAGGTGGCTGCCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp TCTGCCCTTTTGCCTCAAAGAACCACACCCAGGTTGTaGAATGGATCTTCCATTCTATCTCAGCAGGGCATC +
Preference number: 3 (lower is better)
Translates to: SALLPQRTTPRL*NGSSILSQQGI
Trigger: GATGCCCTGCTGAGATAGAATGGAAGATCCATTTCACAACCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 72 bp CTCTCCCAAGAGTTGCTCAGCTATCCAACAGAGAGATaGAAAAATGCCATACACTTACAAGGTGGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: LSQELLSYPTER*KNAIHLQGGSH
Trigger: GTGGCTGCCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCTGTTGGATAGCTGAGCAACTCTTGGGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp ACCTTGGAAGAATATGCCTTCTCAGAGCATTCTTCATaGGCTGCCTTTGAATGCCAGCCCAGAAAACGCACA +
Preference number: 3 (lower is better)
Translates to: TLEEYAFSEHSS*AAFECQPRKRT
Trigger: TGTGCGTTTTCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CAA 90 bp ATTGGAAAAGAATGTGATTTGAAGGCAGTCGATGGAGGGAAAGGCACATCTGTCAACCCACCCCAGATGTaGCCCTTGGAAACTAGACCA +
Preference number: 3 (lower is better)
Translates to: IGKECDLKAVDGGKGTSVNPPQM*PLETRP
Trigger: TGGTCTAGTTTCCAAGGGCAACATCTGGGGTGGGTT...GACAGATGTGCCTTTCCCTCCATCGACTGCCTTCAAATCACATTCTTTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR-3UTR CAA 90 bp ATTGGAAAAGAATGTGATTTGAAGGCAGTCGATGGAGGGAAAGGCACATCTGTCGCCCTGGAAACAAGATaGATGGATCAGGCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: IGKECDLKAVDGGKGTSVALETR*MDQAEG
Trigger: GCCTTCAGCCTGATCCATCAATCTTGTTTCCAGGGC...GACAGATGTGCCTTTCCCTCCATCGACTGCCTTCAAATCACATTCTTTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp ACAGACACAACTTACAGGCAGAAAAGTTGCCCAGGCTaGGAGGGTACTCAAAGACCTGGGCTTGTTTTAATG +
Preference number: 3 (lower is better)
Translates to: TDTTYRQKSCPG*EGTQRPGLVLM
Trigger: CATTAAAACAAGCCCAGGTCTTTGAGTACCCTCTCAGCCTGGGCAACTTTTCTGCCTGTAAGTTGTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp AGCCACTACAATGTAAATCGGCCCTGGAAACAAGATTaGTGGATCAGGCTGAAGGCGATACCGCTAAGTACA +
Preference number: 3 (lower is better)
Translates to: SHYNVNRPWKQD*WIRLKAIPLST
Trigger: TGTACTTAGCGGTATCGCCTTCAGCCTGATCCATCAATCTTGTTTCCAGGGCCGATTTACATTGTAGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR TCA 72 bp AAGATGTTTTCTTGTGGCACCTGTGTTGTCTGGATGTaGCACTACATGATCAGCTTAGGTCCTCCGTCGGAT +
Preference number: 3 (lower is better)
Translates to: KMFSCGTCVVWM*HYMISLGPPSD
Trigger: ATCCGACGGAGGACCTAAGCTGATCATGTAGTGTCACATCCAGACAACACAGGTGCCACAAGAAAACATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp AGAGTTGCTCAGCTATCCAACAGAGAGATGGAAAAATaGCATACACTTACAAGGTGGCAGCCACCTGACAGA +
Preference number: 3 (lower is better)
Translates to: RVAQLSNREMEK*HTLTRWQPPDR
Trigger: TCTGTCAGGTGGCTGCCACCTTGTAAGTGTATGGCATTTTTCCATCTCTCTGTTGGATAGCTGAGCAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR GCA 72 bp ACAGGATGGATGGCAAGTTTATCTGGAGCCTTCCGTTaGCACGGTAACAGTGAAGACAAAACTAACTGCAGA +
Preference number: 3 (lower is better)
Translates to: TGWMASLSGAFR*HGNSEDKTNCR
Trigger: TCTGCAGTTAGTTTTGTCTTCACTGTTACCGTGGCAACGGAAGGCTCCAGATAAACTTGCCATCCATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp AACTTCCCAAGGAGCATGCGCACAGCAAAAAGACCTTaGAAGAATATGCCTTCTCAGAGCATTCTTCATGGG +
Preference number: 3 (lower is better)
Translates to: NFPRSMRTAKRP*KNMPSQSILHG
Trigger: CCCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGTCTTTTTGCTGTGCGCATGCTCCTTGGGAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp CCTTTTGCCTCAAAGAACCACACCCAGGTTGTGAAATaGATCTTCCATTCTATCTCAGCAGGGCATCCTTCA +
Preference number: 3 (lower is better)
Translates to: PFASKNHTQVVK*IFHSISAGHPS
Trigger: TGAAGGATGCCCTGCTGAGATAGAATGGAAGATCCATTTCACAACCTGGGTGTGGTTCTTTGAGGCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR TCA 72 bp ACCGCTAAGTACAGACTGCAGGAATCTGGGGCAGCTTaGATTCTGTTAGCAAGTGAGACATATCCAGTGTTA +
Preference number: 3 (lower is better)
Translates to: TAKYRLQESGAA*ILLASETYPVL
Trigger: TAACACTGGATATGTCTCACTTGCTAACAGAATTCAAGCTGCCCCAGATTCCTGCAGTCTGTACTTAGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp TCTGGGAGAGCCATGGAACAACACATGAACACGCTATaGTTTTTCAACTTGAACCATGGCCACAAAACTGGT +
Preference number: 3 (lower is better)
Translates to: SGRAMEQHMNTL*FFNLNHGHKTG
Trigger: ACCAGTTTTGTGGCCATGGTTCAAGTTGAAAAACCATAGCGTGTTCATGTGTTGTTCCATGGCTCTCCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp GACTCTATTCTTTGCAACTTTCTTCAGAGATGGTTGTaGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: DSILCNFLQRWL*LLGIELRTSGR
Trigger: TCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp CCTTTGGACTCTATTCTTTGCAACTTTCTTCAGAGATaGTTGTGGTTGCTGGGAATTGAACTCAGGACCTCT +
Preference number: 3 (lower is better)
Translates to: PLDSILCNFLQR*LWLLGIELRTS
Trigger: AGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAGAGTCCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CCA 72 bp ACATATCAAGAGTGCAGATGTCTCCCTGAATATATGTaGATCTTCAATATGCAGAATCTTCCCGGATCTTGC +
Preference number: 3 (lower is better)
Translates to: TYQECRCLPEYM*IFNMQNLPGSC
Trigger: GCAAGATCCGGGAAGATTCTGCATATTGAAGATCCACATATATTCAGGGAGACATCTGCACTCTTGATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CCA 72 bp TGCTTTACACGTGGTGATAGAAATCAAACCACAACGTaGTTACCAGAAGATCCAAGTTGTAAAGGTCCAAAA +
Preference number: 3 (lower is better)
Translates to: CFTRGDRNQTTT*LPEDPSCKGPK
Trigger: TTTTGGACCTTTACAACTTGGATCTTCTGGTAACCACGTTGTGGTTTGATTTCTATCACCACGTGTAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
CDS-3UTR CCA 90 bp GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTGTGGGGGCGGTTCCCTaGGTCAGCTGGGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VCLSIRSAHGSWRGVPHRVGAVP*VSWVGA
Trigger: GGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCAC...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR GCA 90 bp AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGTGTGTGAGTCCTTaGCAGAGCCCCGCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SSSSLERRPGQPCIQGSDSCVSP*QSPAWA
Trigger: CGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGA...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS-3UTR CCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC +
Preference number: 4 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTCQSPA*AHPCHR
Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTTGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KCPQGHPTLDSHSCPACAWVRPC*DFWGRE
Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCATCTTGGGTCCGGCCGTaGTGCGACTTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSSWVRP*CDFWGR
Trigger: CCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGA...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: SSSSLERRPGQPCIQGSDMPVSL*LGRKPC
Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTCTTGGGTCCGGCCGTaGTGCGACTTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTSWVRP*CDFWGR
Trigger: CCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTTTAGCCAGGGTACCTTaGCAGAGCCCCGCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: KCPQGHPTLDSHSCPACALARVP*QSPAWA
Trigger: CGCCCAAGCGGGGCTCTGGCAAGGTACCCTGGCTAA...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp TTCCCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGACAGCCCAGGACGGCTaGGGGCATGAGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FPLPRSKSAGGVQGIAGLTAQDG*GHERAE
Trigger: CTCTGCCCTCTCATGCCCGCAGCCGTCCTGGGCTGT...CAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPWVRPC*DFWGRE
Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTTCGTGTGTGAGTCCTTaGCAGAGCCCCGCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: VCLSIRSAHGSWRGVPHRSCVSP*QSPAWA
Trigger: CGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGA...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS-3UTR CCA 90 bp AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG +
Preference number: 4 (lower is better)
Translates to: SSSSLERRPGQPCIQGSDGGSHA*HGPWYL
Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR TCA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCACGTCGTAGGCCCCCTTaGATCCCTTGTGAGCCGATT +
Preference number: 4 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSRRRPP*IPCEPI
Trigger: AATCGGCTCACAAGGGATTCAAGGGGGCCTACGACG...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDMPVSL*LGRKPC
Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp GCCATGGGAGATCCAGAGCGGCTGTCTCTTCCTCCCTTCCCTTGGGATGGAGGTTCTTGGGTCCGGCCGTaGTGCGACTTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AMGDPERLSLPPFPWDGGSWVRP*CDFWGR
Trigger: CCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGA...ACCTCCATCCCAAGGGAAGGGAGGAAGAGACAGCCGCTCTGGATCTCCCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143506.8
CDS-3UTR GCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACAGATTTTGGAAAGCGTaGCCTGGGCGTCGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDRFWKA*PGRRRP
Trigger: GGGCCTACGACGCCCAGGGCACGCTTTCCAAAATCT...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDAWHGP*YLLWPG
Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDTGFSS*VRPCCD
Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCAGGTCTGCTGTGTGCTTaGAGTCTGTCACCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSGLLCA*SLSPPC
Trigger: ACACGGCGGTGACAGACTCCAAGCACACAGCAGACC...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CCA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCACCTGGGTCAGCTGGGTaGGCGCCTTGCCAGTTATTC +
Preference number: 4 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPPGSAG*APCQLF
Trigger: GAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGG...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCAAGAGGCGGATCAAGTaGGGGCGGTTCCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTKRRIK*GRFPGS
Trigger: TGACCCAGGGAACCGCCCCCACTTGATCCGCCTCTT...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDPLPLG*RWCSRC
Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGG...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: VCLSIRSAHGSWRGVPHRMPVSL*LGRKPC
Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPMPVSL*LGRKPC
Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAAGAGGGCTCCGGCTCTaGTTTAGCCAGGGTACCTTG +
Preference number: 4 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPRGLRL*FSQGTL
Trigger: CAAGGTACCCTGGCTAAAGCAGAGCCGGAGCCCTCT...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACATGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTWVRPC*DFWGRE
Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCATCGTGTGTGAGTCCTTaGCAGAGCCCCGCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPSCVSP*QSPAWA
Trigger: CGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGA...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS-3UTR CCA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCACTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSLWPGT*IAVRVS
Trigger: AGAGACCCTCACAGCGATCCAAGTACCTGGCCACAG...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTAWHGP*YLLWPG
Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGTGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC +
Preference number: 4 (lower is better)
Translates to: GVPHREKSEDGVGVNLEGCQSPA*AHPCHR
Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: VCLSIRSAHGSWRGVPHRTGFSS*VRPCCD
Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR TCA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCACCAGCCTCTCCTCGGTaGATCTCTCCATCCTTACTG +
Preference number: 4 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPPASPR*ISPSLL
Trigger: CAGTAAGGATGGAGAGATTCACCGAGGAGAGGCTGG...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR TCA 90 bp GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTAAGCTCGTCGGACTCTaGGGGCCTGTCTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: VCLSIRSAHGSWRGVPHRKLVGL*GPVFEG
Trigger: ACCTTCAAAGACAGGCCCTCAGAGTCCGACGAGCTT...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR TCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACTCTTCTTGGATGGTCTaGAGCTCGTCGGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDSSWMV*SSSDSE
Trigger: CTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAGA...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR TCA 90 bp CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAACGTCGTAGGCCCCCTTaGATCCCTTGTGAGCCGATT +
Preference number: 4 (lower is better)
Translates to: PLPRSKSAGGVQGIAGLERRRPP*IPCEPI
Trigger: AATCGGCTCACAAGGGATTCAAGGGGGCCTACGACG...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGWVRPC*DFWGRE
Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTTGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RCAMSLDSPWALRGNRVLWVRPC*DFWGRE
Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCACCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT +
Preference number: 4 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSPWYLL*PGTWIA
Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TTCCCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FPLPRSKSAGGVQGIAGLAWHGP*YLLWPG
Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...CAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPGGSHA*HGPWYL
Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TGGGACTGGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTTATTCTTTACCCCTGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC +
Preference number: 4 (lower is better)
Translates to: WDWARVNGLGAGVFILYPCQSPA*AHPCHR
Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...GGGGTAAAGAATAAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTGAGGTCCCATTGTTCTaGATCGCATCTGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KCPQGHPTLDSHSCPACAEVPLF*IASASP
Trigger: TGGGGAGGCAGATGCGATCCAGAACAATGGGACCTC...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CCA 90 bp GGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGCCTGGGTCAGCTGGGTaGGCGCCTTGCCAGTTATTC +
Preference number: 4 (lower is better)
Translates to: GLEAGSGVWVPSSLCFCPPGSAG*APCQLF
Trigger: GAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGG...CGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACTCCCTGCCTCCAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTSLPLG*RWCSRC
Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCATCCGTAGCCAAATCCTaGCTTCTGCCCCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSSVAKS*LLPLGP
Trigger: GGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGA...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAACCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: PLPRSKSAGGVQGIAGLEPLPLG*RWCSRC
Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGG...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAACCTCTCCCCTTCCCTTaGGATGGAGGTGGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: PLPRSKSAGGVQGIAGLEPLPFP*DGGGVR
Trigger: TCGAACACCACCTCCATCCCAAGGGAAGGGGAGAGG...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
CDS-3UTR TCA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCAGGTAGTTCTCGTGTGTaGGTCCTTGTACATGTGGCA +
Preference number: 4 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSGSSRV*VLVHVA
Trigger: TGCCACATGTACAAGGACTCACACACGAGAACTACC...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR TCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACGGTAGTTCTCGTGTGTaGGTCCTTGTACATGTGGCA +
Preference number: 4 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDGSSRV*VLVHVA
Trigger: TGCCACATGTACAAGGACTCACACACGAGAACTACC...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR TCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCACGTCGTAGGCCCCCTTaGATCCCTTGTGAGCCGATT +
Preference number: 4 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPRRRPP*IPCEPI
Trigger: AATCGGCTCACAAGGGATTCAAGGGGGCCTACGACG...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTCTTGGGTCCGGCCGTaGTGCGACTTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGSWVRP*CDFWGR
Trigger: CCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp TTCCCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGCTGGGTGGGCGCCTTaGCAGTTATTCTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: FPLPRSKSAGGVQGIAGLAGWAP*QLFFGS
Trigger: AGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGC...CAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR GCA 90 bp GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGTCGTGTGTGAGTCCTTaGCAGAGCCCCGCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: GRKQRKPGPHSPLRHALWSCVSP*QSPAWA
Trigger: CGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGA...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS-3UTR GCA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACTATAGTCGGAAGCTCTaGCTCCGTAGCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDYSRKL*LRSQIL
Trigger: CAGGATTTGGCTACGGAGGCAGAGCTTCCGACTATA...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TTCCCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FPLPRSKSAGGVQGIAGLLWPGT*IAVRVS
Trigger: AGAGACCCTCACAGCGATCCAAGTACCTGGCCACAG...CAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTCCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT +
Preference number: 4 (lower is better)
Translates to: VCLSIRSAHGSWRGVPHRPWYLL*PGTWIA
Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCACCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT +
Preference number: 4 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPPWYLL*PGTWIA
Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGTGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC +
Preference number: 4 (lower is better)
Translates to: VIFPPRLVCTNGHCHGELCQSPA*AHPCHR
Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCAACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPTGFSS*VRPCCD
Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TCCCTCGAGATGAGTGCTTGGAAGCCACTACAATGTAAATCGGCCCTGGAAACAGTGGGGGCGGTTCCCTaGGTCAGCTGGGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: SLEMSAWKPLQCKSALETVGAVP*VSWVGA
Trigger: GGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCAC...TGTTTCCAGGGCCGATTTACATTGTAGTGGCTTCCAAGCACTCATCTCGAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR TCA 90 bp ACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTGATCCTGTTAGGACGGCTGCGGGCATaGGAGGGCAGAGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: TYHKPPLYKPLQDCLILLGRLRA*EGRGLR
Trigger: CCGGAGCCCTCTGCCCTCTCATGCCCGCAGCCGTCC...TAACAGGATCAGACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR TCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACAGGACGGCTGCGGGCATaGGAGGGCAGAGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTGRLRA*EGRGLR
Trigger: CCGGAGCCCTCTGCCCTCTCATGCCCGCAGCCGTCC...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAATGGTCCATGGTACTTaGTGTGGCCAGGTACTTGGA +
Preference number: 4 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPMVHGT*CGQVLG
Trigger: TCCAAGTACCTGGCCACAGCAAGTACCATGGACCAT...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTATGGTCCATGGTACTTaGTGTGGCCAGGTACTTGGA +
Preference number: 4 (lower is better)
Translates to: KCPQGHPTLDSHSCPACAMVHGT*CGQVLG
Trigger: TCCAAGTACCTGGCCACAGCAAGTACCATGGACCAT...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCACAGCCCAGGACGGCTaGGGGCATGAGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLCSHTTSPRCISHSKTVTAQDG*GHERAE
Trigger: CTCTGCCCTCTCATGCCCGCAGCCGTCCTGGGCTGT...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RVLKSTSSGEPLRRDGDIWVRPC*DFWGRE
Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTCTTGGGTCCGGCCGTaGTGCGACTTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLCSHTTSPRCISHSKTVSWVRP*CDFWGR
Trigger: CCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGA...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TGCGGCTGTGTGCATGTGTGGGCTTGGCTACACAGATGGACCTCAGGGGGCAGTCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CGCVHVWAWLHRWTSGGSLWPGT*IAVRVS
Trigger: AGAGACCCTCACAGCGATCCAAGTACCTGGCCACAG...ACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGCCCACACATGCACACAGCCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp GGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG +
Preference number: 4 (lower is better)
Translates to: GLEAGSGVWVPSSLCFCPGGSHA*HGPWYL
Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...CGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACTCCCTGCCTCCAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGAGTCCTTGTACATGTaGCACAGCCCAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSESLYM*HSPGRL
Trigger: CAGCCGTCCTGGGCTGTGCCACATGTACAAGGACTC...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSTGFSS*VRPCCD
Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GAACCTTCCTATGATTTGTGTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCGTTCCCTGGGTCAGCTaGGTGGGCGCCTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EPSYDLCSETLAGGLGTVVPWVS*VGALPV
Trigger: AACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAAC...GACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCATAGGAAGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR TCA 90 bp TGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTGGCACCAAGCTCGTCGGACTCTaGGGGCCTGTCTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: WGSFSTRVGHIAASPGGTKLVGL*GPVFEG
Trigger: ACCTTCAAAGACAGGCCCTCAGAGTCCGACGAGCTT...GGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR GCA 90 bp GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGAGAGGGCTCCGGCTCTaGTTTAGCCAGGGTACCTTG +
Preference number: 4 (lower is better)
Translates to: GRKQRKPGPHSPLRHALWRGLRL*FSQGTL
Trigger: CAAGGTACCCTGGCTAAAGCAGAGCCGGAGCCCTCT...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCACCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT +
Preference number: 4 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPPWYLL*PGTWIA
Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACAGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTAWHGP*YLLWPG
Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC +
Preference number: 4 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTCQSPA*AHPCHR
Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp ACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTGATCCTGTTATGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC +
Preference number: 4 (lower is better)
Translates to: TYHKPPLYKPLQDCLILLCQSPA*AHPCHR
Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...TAACAGGATCAGACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGGAGTCCTTGTACATGTaGCACAGCCCAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: GRKQRKPGPHSPLRHALWESLYM*HSPGRL
Trigger: CAGCCGTCCTGGGCTGTGCCACATGTACAAGGACTC...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTAAGAGGCGGATCAAGTaGGGGCGGTTCCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: FYRLGNPFLRGHSTASLSKRRIK*GRFPGS
Trigger: TGACCCAGGGAACCGCCCCCACTTGATCCGCCTCTT...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp TGCGGCTGTGTGCATGTGTGGGCTTGGCTACACAGATGGACCTCAGGGGGCAGTTGGGGTCTTCTTGGATaGTCTGAAGCTCGTCGGACT +
Preference number: 4 (lower is better)
Translates to: CGCVHVWAWLHRWTSGGSWGLLG*SEARRT
Trigger: AGTCCGACGAGCTTCAGACCATCCAAGAAGACCCCA...ACTGCCCCCTGAGGTCCATCTGTGTAGCCAAGCCCACACATGCACACAGCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTPLPLG*RWCSRC
Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGCCTCTCCCCTTCCCTTaGGATGGAGGTGGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: GRKQRKPGPHSPLRHALWPLPFP*DGGGVR
Trigger: TCGAACACCACCTCCATCCCAAGGGAAGGGGAGAGG...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
CDS-3UTR GCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCAATGGTCCATGGTACTTaGTGTGGCCAGGTACTTGGA +
Preference number: 4 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPMVHGT*CGQVLG
Trigger: TCCAAGTACCTGGCCACAGCAAGTACCATGGACCAT...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTWVRPC*DFWGRE
Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp CTTCCCTTGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATGTGGGTCCGGCCGTGCTaGGACTTCTGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPLGWRWCSRCHNVLEEMWVRPC*DFWGRE
Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCA...CATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143506.8
CDS-3UTR GCA 90 bp TGCAGGGTGAGGGAGGGGGCTCAGAGTCTCCCAGGTTCTATTTGGGGATCCTTTGCTGGGTGGGCGCCTTaGCAGTTATTCTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: CRVREGAQSLPGSIWGSFAGWAP*QLFFGS
Trigger: AGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGC...AAAGGATCCCCAAATAGAACCTGGGAGACTCTGAGCCCCCTCCCTCACCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR GCA 90 bp GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGTCGTGTGTGAGTCCTTaGCAGAGCCCCGCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: VLKSTSSGEPLRRDGDIWSCVSP*QSPAWA
Trigger: CGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGA...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS-3UTR CCA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGAWHGP*YLLWPG
Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GAACCTTCCTATGATTTGTGTTCTGAGACGCTGGCTGGTGGCCTGGGGACTGTCGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EPSYDLCSETLAGGLGTVAWHGP*YLLWPG
Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...GACAGTCCCCAGGCCACCAGCCAGCGTCTCAGAACACAAATCATAGGAAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQAWHGP*YLLWPG
Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQTGFSS*VRPCCD
Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGTGFSS*VRPCCD
Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPEEMDY*VFILGP
Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTEEMDY*VFILGP
Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTGGTCTGCTGTGTGCTTaGAGTCTGTCACCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: FYRLGNPFLRGHSTASLSGLLCA*SLSPPC
Trigger: ACACGGCGGTGACAGACTCCAAGCACACAGCAGACC...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTGTTCCCTGGGTCAGCTaGGTGGGCGCCTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: RVLKSTSSGEPLRRDGDIVPWVS*VGALPV
Trigger: AACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAAC...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CCA 90 bp GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGTCCGTAGCCAAATCCTaGCTTCTGCCCCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VIFPPRLVCTNGHCHGELSVAKS*LLPLGP
Trigger: GGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGA...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGTCCGTAGCCAAATCCTaGCTTCTGCCCCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VLKSTSSGEPLRRDGDIWSVAKS*LLPLGP
Trigger: GGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGA...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RCAMSLDSPWALRGNRVLPLPLG*RWCSRC
Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGG...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTCCTCTCCCCTTCCCTTaGGATGGAGGTGGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: RCAMSLDSPWALRGNRVLPLPFP*DGGGVR
Trigger: TCGAACACCACCTCCATCCCAAGGGAAGGGGAGAGG...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
3UTR CAA 72 bp AACTCCTGCAGTCCCACTTCCAGATGCGCCATGTCCTaGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTT +
Preference number: 4 (lower is better)
Translates to: NSCSPTSRCAMS*DSPWALRGNRV
Trigger: AACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCTGGAAGTGGGACTGCAGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp AAAACAAGTAGAAATTGGCTAAGTGGCGACCACGCCCACTCCACGCCCAATCCCATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: KTSRNWLSGDHAHSTPNPMPVSL*LGRKPC
Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...GGGATTGGGCGTGGAGTGGGCGTGGTCGCCACTTAGCCAATTTCTACTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR GCA 90 bp CTACACAGATGGACCTCAGGGGGCAGTCAGGATCCTCCAGATCTCAAGCGCCTCGTTCTGGATCGCATCTaGCTCCCCAAACACATCACT +
Preference number: 4 (lower is better)
Translates to: LHRWTSGGSQDPPDLKRLVLDRI*LPKHIT
Trigger: AGTGATGTGTTTGGGGAGGCAGATGCGATCCAGAAC...GAGGCGCTTGAGATCTGGAGGATCCTGACTGCCCCCTGAGGTCCATCTGTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGLWPGT*IAVRVS
Trigger: AGAGACCCTCACAGCGATCCAAGTACCTGGCCACAG...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACACCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT +
Preference number: 4 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTPWYLL*PGTWIA
Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RCAMSLDSPWALRGNRVLGGSHA*HGPWYL
Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: SLCSHTTSPRCISHSKTVTGFSS*VRPCCD
Trigger: GTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGT...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGGTCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GVPHREKSEDGVGVNLEGVLPLG*RWCSRC
Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGAC...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080658.12
CDS-3UTR GCA 90 bp GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: VIFPPRLVCTNGHCHGELMPVSL*LGRKPC
Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: VLKSTSSGEPLRRDGDIWMPVSL*LGRKPC
Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGAGATTTTGGAAAGCGTaGCCTGGGCGTCGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: VIFPPRLVCTNGHCHGELRFWKA*PGRRRP
Trigger: GGGCCTACGACGCCCAGGGCACGCTTTCCAAAATCT...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VIFPPRLVCTNGHCHGELAWHGP*YLLWPG
Trigger: ACCTGGCCACAGCAAGTACCATGGACCATGCCAGGC...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCGCTGACCACCCCACCAGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LVCTNGHCHGELPLTTPPEEMDY*VFILGP
Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...TGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAGTGCCCATTGGTACACACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTTGGGGTCTTCTTGGATaGTCTGAAGCTCGTCGGACT +
Preference number: 4 (lower is better)
Translates to: RCAMSLDSPWALRGNRVLWGLLG*SEARRT
Trigger: AGTCCGACGAGCTTCAGACCATCCAAGAAGACCCCA...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CCA 90 bp GTTATTTTTCCACCGAGGTTAGTGTGTACCAATGGGCACTGCCATGGCGAGCTGCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: VIFPPRLVCTNGHCHGELPLPLG*RWCSRC
Trigger: ACACCTCGAACACCACCTCCATCCCAAGGGAAGGGG...CAGCTCGCCATGGCAGTGCCCATTGGTACACACTAACCTCGGTGGAAAAATAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CAA 72 bp TTCTATCTCAGCAGGGCATCCTTCAAAGCCATCTCTTaGTGGTCCTGGGCCTCAGGGCAAGTCATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: FYLSRASFKAIS*WSWASGQVMGS
Trigger: ACTCCCCATGACTTGCCCTGAGGCCCAGGACCACAAAGAGATGGCTTTGAAGGATGCCCTGCTGAGATAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CAA 72 bp AGACGGAGCCAGAGAGAAACTCCCTGGGTTTTGTCATaGCGGCTGCACTCTGCCCTTTTGCCTCAAAGAACC +
Preference number: 4 (lower is better)
Translates to: RRSQRETPWVLS*RLHSALLPQRT
Trigger: GGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAACCCAGGGAGTTTCTCTCTGGCTCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
CDS-3UTR GCA 90 bp GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGGTTCTGGATCGCATCTaGCTCCCCAAACACATCACT +
Preference number: 4 (lower is better)
Translates to: GVPHREKSEDGVGVNLEGVLDRI*LPKHIT
Trigger: AGTGATGTGTTTGGGGAGGCAGATGCGATCCAGAAC...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR GCA 90 bp GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGTATAGTCGGAAGCTCTaGCTCCGTAGCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: GVPHREKSEDGVGVNLEGYSRKL*LRSQIL
Trigger: CAGGATTTGGCTACGGAGGCAGAGCTTCCGACTATA...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VLKSTSSGEPLRRDGDIWLWPGT*IAVRVS
Trigger: AGAGACCCTCACAGCGATCCAAGTACCTGGCCACAG...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TGGGACTGGGCGAGAGTTAATGGGCTCGGAGCAGGTGTCTTTATTCTTTACCCCCCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT +
Preference number: 4 (lower is better)
Translates to: WDWARVNGLGAGVFILYPPWYLL*PGTWIA
Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...GGGGTAAAGAATAAAGACACCTGCTCCGAGCCCATTAACTCTCGCCCAGTCCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG +
Preference number: 4 (lower is better)
Translates to: VLKSTSSGEPLRRDGDIWGGSHA*HGPWYL
Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RVLKSTSSGEPLRRDGDIGGSHA*HGPWYL
Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATATGCCAGAGCCCCGCTTaGGCGCACCCCTGTCACCGC +
Preference number: 4 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAICQSPA*AHPCHR
Trigger: GCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCA...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CAA 72 bp CCTCAGGTCCACACAATCCAGGGCACAGTCAATCACTaGAGCTTTGGGAAGGATGGACTGTGGGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: PQVHTIQGTVNH*SFGKDGLWVEN
Trigger: ATTCTCCACCCACAGTCCATCCTTCCCAAAGCTCAAGTGATTGACTGTGCCCTGGATTGTGTGGACCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
CDS-3UTR GCA 90 bp AGCCTGTGCTCACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCATGGTCCATGGTACTTaGTGTGGCCAGGTACTTGGA +
Preference number: 4 (lower is better)
Translates to: SLCSHTTSPRCISHSKTVMVHGT*CGQVLG
Trigger: TCCAAGTACCTGGCCACAGCAAGTACCATGGACCAT...GACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGTGAGCACAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACAATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTMPVSL*LGRKPC
Trigger: GCATGGCTTCCTCCCAAGGCACAGAGACACGGGCAT...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCGCTCGGAGCTCACCTTaGCAGAGCCCCGCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: IRYKHKLQTFPHLQRVRRARSSP*QSPAWA
Trigger: CGCCCAAGCGGGGCTCTGGCAAGGTGAGCTCCGAGC...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR GCA 90 bp ACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTGATCCTGTTAAGATTTTGGAAAGCGTaGCCTGGGCGTCGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: TYHKPPLYKPLQDCLILLRFWKA*PGRRRP
Trigger: GGGCCTACGACGCCCAGGGCACGCTTTCCAAAATCT...TAACAGGATCAGACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGCCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT +
Preference number: 4 (lower is better)
Translates to: VLKSTSSGEPLRRDGDIWPWYLL*PGTWIA
Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GRKQRKPGPHSPLRHALWEEMDY*VFILGP
Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR TCA 90 bp GAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATGCCAGCCCAGATCTTCTTGGATGGTCTaGAGCTCGTCGGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: EYAFSEHSSWAAFECQPRSSWMV*SSSDSE
Trigger: CTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAGA...TCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR GCA 90 bp GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGGTTATTCTTTGGGTCTaGTGTGTGCTTGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: GVPHREKSEDGVGVNLEGVILWV*CVLGVC
Trigger: ACAGACTCCAAGCACACAGCAGACCCAAAGAATAAC...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CCA 90 bp GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GVPHREKSEDGVGVNLEGEEMDY*VFILGP
Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR GCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATATTAGCCAGGGTACCTTaGCAGAGCCCCGCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAILARVP*QSPAWA
Trigger: CGCCCAAGCGGGGCTCTGGCAAGGTACCCTGGCTAA...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACACCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCT +
Preference number: 4 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTPWYLL*PGTWIA
Trigger: AGCGATCCAAGTACCTGGCCACAGCAAGTACCATGG...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CAA 72 bp GCAACTTTCTTCAGAGATGGTTGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: ATFFRDGCGCWE*NSGPLEEQSVL
Trigger: GAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 72 bp CTTAAAAGATGTTGCACTCAGTTCCTTCCATGGGGTTaGATCCTAGGTGCTGCGTGCTCAGTGGCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LKRCCTQFLPWG*ILGAACSVAVL
Trigger: CAAGACAGCCACTGAGCACGCAGCACCTAGGATCAAACCCCATGGAAGGAACTGAGTGCAACATCTTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CAA 72 bp TATGTGGATCTTCAATATGCAGAATCTTCCCGGATCTaGCAGAGCAAGCAGCTCACGTGGGCAAACCCGGTA +
Preference number: 4 (lower is better)
Translates to: YVDLQYAESSRI*QSKQLTWANPV
Trigger: TACCGGGTTTGCCCACGTGAGCTGCTTGCTCTGCAAGATCCGGGAAGATTCTGCATATTGAAGATCCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
CDS-3UTR GCA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACATATAGTCGGAAGCTCTaGCTCCGTAGCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTYSRKL*LRSQIL
Trigger: CAGGATTTGGCTACGGAGGCAGAGCTTCCGACTATA...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: RVLKSTSSGEPLRRDGDIEEMDY*VFILGP
Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp GTTTTGTCATTGCGGCTGCACTCTGCCCTTTTGCCTCAAAGAACCACACCCAGGGCCAGATTTCCTTACTaGCCTTCTCAGCAGATAATT +
Preference number: 4 (lower is better)
Translates to: VLSLRLHSALLPQRTTPRARFPY*PSQQII
Trigger: AATTATCTGCTGAGAAGGCCAGTAAGGAAATCTGGC...CCTGGGTGTGGTTCTTTGAGGCAAAAGGGCAGAGTGCAGCCGCAATGACAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
3UTR CAA 72 bp CACGGGCTCATGAGTAACCCACCCCAGATGTTGCCCTaGGAAACTAGACCATCTGCACAATTTTATCTTCTG +
Preference number: 4 (lower is better)
Translates to: HGLMSNPPQMLP*ETRPSAQFYLL
Trigger: CAGAAGATAAAATTGTGCAGATGGTCTAGTTTCCAAGGGCAACATCTGGGGTGGGTTACTCATGAGCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 72 bp CTGAACCACGGGCTCATGAGTAACCCACCCCAGATGTaGCCCTTGGAAACTAGACCATCTGCACAATTTTAT +
Preference number: 4 (lower is better)
Translates to: LNHGLMSNPPQM*PLETRPSAQFY
Trigger: ATAAAATTGTGCAGATGGTCTAGTTTCCAAGGGCAACATCTGGGGTGGGTTACTCATGAGCCCGTGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 72 bp AGTTTTGACAACAGACACAACTTACAGGCAGAAAAGTaGCCCAGGCTGAGAGGGTACTCAAAGACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SFDNRHNLQAEK*PRLRGYSKTWA
Trigger: AGCCCAGGTCTTTGAGTACCCTCTCAGCCTGGGCAACTTTTCTGCCTGTAAGTTGTGTCTGTTGTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR GCA 90 bp TCCCTCGAGATGAGTGCTTGGAAGCCACTACAATGTAAATCGGCCCTGGAAACAGTTATTCTTTGGGTCTaGTGTGTGCTTGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SLEMSAWKPLQCKSALETVILWV*CVLGVC
Trigger: ACAGACTCCAAGCACACAGCAGACCCAAAGAATAAC...TGTTTCCAGGGCCGATTTACATTGTAGTGGCTTCCAAGCACTCATCTCGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATAGGAGGAAGCCATGCCTaGCATGGTCCATGGTACTTG +
Preference number: 4 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAIGGSHA*HGPWYL
Trigger: CAAGTACCATGGACCATGCCAGGCATGGCTTCCTCC...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CCA 90 bp ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCGAGGTCCCATTGTTCTaGATCGCATCTGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: IRYKHKLQTFPHLQRVRREVPLF*IASASP
Trigger: TGGGGAGGCAGATGCGATCCAGAACAATGGGACCTC...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 72 bp GAACTTCCCAAGGAGCATGCGCACAGCAAAAAGACCTaGGAAGAATATGCCTTCTCAGAGCATTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: ELPKEHAHSKKT*EEYAFSEHSSW
Trigger: CCATGAAGAATGCTCTGAGAAGGCATATTCTTCCAAGGTCTTTTTGCTGTGCGCATGCTCCTTGGGAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 72 bp CATCTCAGTCAAAAGCCTCTTGCGTTCGCCAGAGTTTaGACAACAGACACAACTTACAGGCAGAAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: HLSQKPLAFARV*TTDTTYRQKSC
Trigger: GCAACTTTTCTGCCTGTAAGTTGTGTCTGTTGTCAAAACTCTGGCGAACGCAAGAGGCTTTTGACTGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR GCA 90 bp ATTCTGTTAGCAAGTGAGACATATCCAGTGTTAATGACAAGTAGCGCTGACATCATGGTCCATGGTACTTaGTGTGGCCAGGTACTTGGA +
Preference number: 4 (lower is better)
Translates to: ILLASETYPVLMTSSADIMVHGT*CGQVLG
Trigger: TCCAAGTACCTGGCCACAGCAAGTACCATGGACCAT...GATGTCAGCGCTACTTGTCATTAACACTGGATATGTCTCACTTGCTAACAGAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 72 bp CTTGTTTTAATGGCCCATCCATATCTCTCCCAAGAGTaGCTCAGCTATCCAACAGAGAGATGGAAAAATGCC +
Preference number: 4 (lower is better)
Translates to: LVLMAHPYLSQE*LSYPTERWKNA
Trigger: GGCATTTTTCCATCTCTCTGTTGGATAGCTGAGCAACTCTTGGGAGAGATATGGATGGGCCATTAAAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 72 bp TCTATTCTTTGCAACTTTCTTCAGAGATGGTTGTGGTaGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SILCNFLQRWLW*LGIELRTSGRA
Trigger: TGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
3UTR CAA 72 bp TTGGACTCTATTCTTTGCAACTTTCTTCAGAGATGGTaGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LDSILCNFLQRW*WLLGIELRTSG
Trigger: TCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAACCATCTCTGAAGAAAGTTGCAAAGAATAGAGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CCA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATAGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAIEEMDY*VFILGP
Trigger: CGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTC...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
3UTR CAA 72 bp AATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATaGTGGCGATACATTAATCGGTGTTATCTTAAACCC +
Preference number: 4 (lower is better)
Translates to: NFFPAFSLTLTL*WRYINRCYLKP
Trigger: GGGTTTAAGATAACACCGATTAATGTATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDLPEPR*GAPLSP
Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACCTCGGCCCCCTTCCCTaGGGATGGAGGTGGTGTTCG +
Preference number: 5 (lower is better)
Translates to: SSSSLERRPGQPCIQGSDLGPLP*GWRWCS
Trigger: CGAACACCACCTCCATCCCAAGGGAAGGGGGCCGAG...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000132369.3
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: VCLSIRSAHGSWRGVPHRLPEPR*GAPLSP
Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTLPEPR*GAPLSP
Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTTTAGCCAGGGTACCTaGCCAGAGCCCCGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SSSSLERRPGQPCIQGSDFSQGT*PEPRLG
Trigger: GCCCAAGCGGGGCTCTGGCAAGGTACCCTGGCTAAA...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCTCGTGTGTGAGTCCTaGCCAGAGCCCCGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTLVCES*PEPRLG
Trigger: GCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS-3UTR CAA 90 bp AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCTCGTGTGTGAGTCCTaGCCAGAGCCCCGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: KCPQGHPTLDSHSCPACALVCES*PEPRLG
Trigger: GCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAG...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS-3UTR CAA 90 bp GTGTGCCTGTCTATCCGCAGTGCCCACGGAAGCTGGAGGGGTGTGCCTCACCGTCTCGTGTGTGAGTCCTaGCCAGAGCCCCGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: VCLSIRSAHGSWRGVPHRLVCES*PEPRLG
Trigger: GCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAG...ACGGTGAGGCACACCCCTCCAGCTTCCGTGGGCACTGCGGATAGACAGGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS-3UTR CAA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCAGCTGTGGCCAGGTACTaGGATCGCTGTGAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSAVARY*DRCEGL
Trigger: GAGACCCTCACAGCGATCCAAGTACCTGGCCACAGC...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp AGCTCCTCATCCCTGGAGCGTCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACCATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG +
Preference number: 5 (lower is better)
Translates to: SSSSLERRPGQPCIQGSDHGPWY*LWPGTW
Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...GTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGACGCTCCAGGGATGAGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp CTACACAGATGGACCTCAGGGGGCAGTCAGGATCCTCCAGATCTCAAGCGCCTCTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: LHRWTSGGSQDPPDLKRLLPEPR*GAPLSP
Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...GAGGCGCTTGAGATCTGGAGGATCCTGACTGCCCCCTGAGGTCCATCTGTGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGGGTCTGCTGTGTGCTaGGAGTCTGTCACCGCCGTG +
Preference number: 5 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPGSAVC*ESVTAV
Trigger: CACGGCGGTGACAGACTCCAAGCACACAGCAGACCC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CAA 90 bp CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAACTCGTGTGTGAGTCCTaGCCAGAGCCCCGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PLPRSKSAGGVQGIAGLELVCES*PEPRLG
Trigger: GCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAG...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS-3UTR CAA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGCTGTGGCCAGGTACTaGGATCGCTGTGAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPAVARY*DRCEGL
Trigger: GAGACCCTCACAGCGATCCAAGTACCTGGCCACAGC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTGCTGTGGCCAGGTACTaGGATCGCTGTGAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: KCPQGHPTLDSHSCPACAAVARY*DRCEGL
Trigger: GAGACCCTCACAGCGATCCAAGTACCTGGCCACAGC...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACATTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTLPEPR*GAPLSP
Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp CTGCCATGGCGAGCTGCCGCTGACCACCCCACCATGAGAAGTGGCCAGAGGGACTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA +
Preference number: 5 (lower is better)
Translates to: LPWRAAADHPTMRSGQRDYWVFI*GPAVLR
Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...GTCCCTCTGGCCACTTCTCATGGTGGGGTGGTCAGCGGCAGCTCGCCATGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCATCTTCCTCCCTTCCCTaGGGATGGAGGTGGTGTTCG +
Preference number: 5 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSSSSLP*GWRWCS
Trigger: CGAACACCACCTCCATCCCAAGGGAAGGGAGGAAGA...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS TCA 90 bp TGTGAGTCCTTGTACATGTGGCACAGCCCAGGACGGCTGCGGGCATaGGAGGGCAGAGGGCTCCGGCTCTGCTTTAGCCAGGGTACCTTG +
Preference number: 5 (lower is better)
Translates to: CESLYMWHSPGRLRA*EGRGLRLCFSQGTL
Trigger: CAAGGTACCCTGGCTAAAGCAGAGCCGGAGCCCTCTGCCCTCTCATGCCCGCAGCCGTCCTGGGCTGTGCCACATGTACAAGGACTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000062446.15
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS GCA 90 bp CCCTGGGTCAGCTGGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTaGTGTGTGCTTGGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: PWVSWVGALPVILWV*CVLGVCHRRVLSRG
Trigger: ACCTCGGCTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp GTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCACATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG +
Preference number: 5 (lower is better)
Translates to: VSPGPPHSGLSQLPSLCSHGPWY*LWPGTW
Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...TGAGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGLPEPR*GAPLSP
Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCATACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA +
Preference number: 5 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPYWVFI*GPAVLR
Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA +
Preference number: 5 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTYWVFI*GPAVLR
Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp GGACTGGAGGCAGGGAGTGGTGTGTGGGTCCCTAGTTCTCTTTGCTTCTGCCCGGGGTCTGCTGTGTGCTaGGAGTCTGTCACCGCCGTG +
Preference number: 5 (lower is better)
Translates to: GLEAGSGVWVPSSLCFCPGSAVC*ESVTAV
Trigger: CACGGCGGTGACAGACTCCAAGCACACAGCAGACCC...CGGGCAGAAGCAAAGAGAACTAGGGACCCACACACCACTCCCTGCCTCCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS GCA 90 bp CGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTGGGTGGGCGCCTTaGCAGTTATTCTTTGGGTCTGCTGTGTGCTTGGAGTCTGTCACC +
Preference number: 5 (lower is better)
Translates to: RIKWGRFPGSAGWAP*QLFFGSAVCLESVT
Trigger: GGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp TCGCCCAGGCCAGCCCTGCATCCAGGGCAGCGACTCGATTCAGTGACAGGAACCCATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG +
Preference number: 5 (lower is better)
Translates to: SPRPALHPGQRLDSVTGTHGPWY*LWPGTW
Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...GGTTCCTGTCACTGAATCGAGTCGCTGCCCTGGATGCAGGGCTGGCCTGGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp AAGTGTCCCCAGGGCCACCCCACTCTGGACTCTCACAGCTGCCCAGCCTGTGCTCCCAGCTTAAAGATTTaGGAAAGCGTGCCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: KCPQGHPTLDSHSCPACAPSLKI*ESVPWA
Trigger: CGCCCAGGGCACGCTTTCCAAAATCTTTAAGCTGGG...AGCACAGGCTGGGCAGCTGTGAGAGTCCAGAGTGGGGTGGCCCTGGGGACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS GCA 90 bp TCAGCTGGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTaGTTGGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGTCCCATTG +
Preference number: 5 (lower is better)
Translates to: SAGWAPCQLFFGSAV*LESVTAVSSAEVPL
Trigger: CAATGGGACCTCGGCTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 90 bp GAAAAGAGGCGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTGGGTaGGCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: EKRRIKWGRFPGSAG*APCQLFFGSAVCLE
Trigger: CTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCGCCTCTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 90 bp TCGGGAAAAGAGGCGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTaGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SGKEADQVGAVPWVS*VGALPVILWVCCVL
Trigger: AAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCGCCTCTTTTCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 90 bp GTGAGCCGATTTATAGTCGGAAGCTCTGCCTCCGTAGCCAAATCCTaGCTTCTGCCCCTCGGCCCCCTTCCCTTGGGATGGAGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: VSRFIVGSSASVAKS*LLPLGPLPLGWRWC
Trigger: ACACCACCTCCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGAGGCAGAGCTTCCGACTATAAATCGGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000132369.3
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGCTGTGGCCAGGTACTaGGATCGCTGTGAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSAVARY*DRCEGL
Trigger: GAGACCCTCACAGCGATCCAAGTACCTGGCCACAGC...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp GTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTGGTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: VLKSTSSGEPLRRDGDIWLPEPR*GAPLSP
Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...CCAAATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: RVLKSTSSGEPLRRDGDILPEPR*GAPLSP
Trigger: CGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAA...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGCTCGTGTGTGAGTCCTaGCCAGAGCCCCGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGLVCES*PEPRLG
Trigger: GCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAG...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS GCA 90 bp CCGCTAAAGAAGCGCCCGATGGAGTCAAGGATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGCCTGGCATGGTCCATGGTACTTGCT +
Preference number: 5 (lower is better)
Translates to: PLKKRPMESRMPVSL*LGRKPCLAWSMVLA
Trigger: AGCAAGTACCATGGACCATGCCAGGCATGGCTTCCTCCCAAGGCACAGAGACACGGGCATCCTTGACTCCATCGGGCGCTTCTTTAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000091789.11
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS CCA 90 bp TTGGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGTCCCATTGTTCTaGATCGCATCTGCCTCCCCAAACACATCACTGTCCTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: LESVTAVSSAEVPLF*IASASPNTSLSSEA
Trigger: GGCCTCAGAGGACAGTGATGTGTTTGGGGAGGCAGATGCGATCCAGAACAATGGGACCTCGGCTGAGGACACGGCGGTGACAGACTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp TGGGGATCCTTTTCCACACGGGTGGGTCACATAGCTGCATCTCCAGGTGGCACCCTGTCTTTGAAGGTGTaGTCCTCCCTTCCCGGGGCA +
Preference number: 5 (lower is better)
Translates to: WGSFSTRVGHIAASPGGTLSLKV*SSLPGA
Trigger: TGCCCCGGGAAGGGAGGACAACACCTTCAAAGACAG...GGTGCCACCTGGAGATGCAGCTATGTGACCCACCCGTGTGGAAAAGGATCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS TCA 90 bp CTTCTTGGATGGTCTGAAGCTCGTCGGACTCTGAGGGCCTGTCTTTaGAGGTGTTGTCCTCCCTTCCCGGGGCATCTCGGGAAAAGAGGC +
Preference number: 5 (lower is better)
Translates to: LLGWSEARRTLRACL*RCCPPFPGHLGKRG
Trigger: GCCTCTTTTCCCGAGATGCCCCGGGAAGGGAGGACAACACCTTCAAAGACAGGCCCTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS TCA 90 bp ACATCCAGGCCTCCGGAAGCTGCTGTGGGGTCTTCTTGGATGGTCTaGAGCTCGTCGGACTCTGAGGGCCTGTCTTTGAAGGTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TSRPPEAAVGSSWMV*SSSDSEGLSLKVLS
Trigger: GGACAACACCTTCAAAGACAGGCCCTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAGACCCCACAGCAGCTTCCGGAGGCCTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 90 bp GCCTTGGGAGGAAGCCATGCCTGGCATGGTCCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCTGTGAGGGTCTCTTCTGTGATGCCA +
Preference number: 5 (lower is better)
Translates to: ALGGSHAWHGPWYLL*PGTWIAVRVSSVMP
Trigger: TGGCATCACAGAAGAGACCCTCACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCAGGCATGGCTTCCTCCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000091789.11
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG +
Preference number: 5 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSHGPWY*LWPGTW
Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp CATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGTCACATACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA +
Preference number: 5 (lower is better)
Translates to: HTAAALSGRSHGQGRSVTYWVFI*GPAVLR
Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...TGTGACTGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS CCA 90 bp AGCCATGCCTGGCATGGTCCATGGTACTTGCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCTTCTGTGATGCCATCACATCCAGGC +
Preference number: 5 (lower is better)
Translates to: SHAWHGPWYLLWPGT*IAVRVSSVMPSHPG
Trigger: GCCTGGATGTGATGGCATCACAGAAGAGACCCTCACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCAGGCATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA +
Preference number: 5 (lower is better)
Translates to: RCAMSLDSPWALRGNRVLYWVFI*GPAVLR
Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA +
Preference number: 5 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQYWVFI*GPAVLR
Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp GACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTAAAAGCACCAGCTCTGGGTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGA +
Preference number: 5 (lower is better)
Translates to: DSPWALRGNRVLKSTSSGYWVFI*GPAVLR
Trigger: TCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTA...CCCAGAGCTGGTGCTTTTAAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp CTGCGCCATGCTCTCTGGCTCCTTGGCGGTGTGCCTGTCTATCCGCAGTGCCCAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG +
Preference number: 5 (lower is better)
Translates to: LRHALWLLGGVPVYPQCPGVTMF*KKWTTG
Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...TGGGCACTGCGGATAGACAGGCACACCGCCAAGGAGCCAGAGAGCATGGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp GGTGTGCCTCACCGTGAAAAGTCTGAGGATGGAGTAGGGGTGAACTTGGAAGGGTCAGCCGAGGTCCCATaGTTCTGGATCGCATCTGCC +
Preference number: 5 (lower is better)
Translates to: GVPHREKSEDGVGVNLEGSAEVP*FWIASA
Trigger: GGCAGATGCGATCCAGAACAATGGGACCTCGGCTGA...CCCTTCCAAGTTCACCCCTACTCCATCCTCAGACTTTTCACGGTGAGGCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CAA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGAGCTGGGTGGGCGCCTaGCCAGTTATTCTTTGGGTC +
Preference number: 5 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQSWVGA*PVILWV
Trigger: GACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCT...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS-3UTR CAA 90 bp ATGGACATTATTAGACTGGGGTTCTCAGCTCCTCATCCCTGGAGCGTCGCCCAGCTGTCTTTGAAGGTGTaGTCCTCCCTTCCCGGGGCA +
Preference number: 5 (lower is better)
Translates to: MDIIRLGFSAPHPWSVAQLSLKV*SSLPGA
Trigger: TGCCCCGGGAAGGGAGGACAACACCTTCAAAGACAG...CTGGGCGACGCTCCAGGGATGAGGAGCTGAGAACCCCAGTCTAATAATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS GCA 90 bp CCTCCCCAAACACATCACTGTCCTCTGAGGCCGTCTGAGAAAGCTTaGCCACGCTTCTCTTCTTTCCAGCCTCTCCTCGGTGAATCTCTC +
Preference number: 5 (lower is better)
Translates to: PPQTHHCPLRPSEKA*PRFSSFQPLLGESL
Trigger: GAGAGATTCACCGAGGAGAGGCTGGAAAGAAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 90 bp GTAGCCAAATCCTGGCTTCTGCCCCTCGGCCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATGGAC +
Preference number: 5 (lower is better)
Translates to: VAKSWLLPLGPLPLG*RWCSRCHNVLEEMD
Trigger: GTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAGCCAGGATTTGGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000132369.3
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTCATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG +
Preference number: 5 (lower is better)
Translates to: RCAMSLDSPWALRGNRVLHGPWY*LWPGTW
Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp CCTCTGCCACGCTCGAAATCAGCTGGTGGGGTGCAGGGGATAGCTGGCCTGGAAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG +
Preference number: 5 (lower is better)
Translates to: PLPRSKSAGGVQGIAGLEGVTMF*KKWTTG
Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...TTCCAGGCCAGCTATCCCCTGCACCCCACCAGCTGATTTCGAGCGTGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCACTTGCCAGTTATTCTTaGGGTCTGCTGTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSLASYS*GLLCAW
Trigger: CCAAGCACACAGCAGACCCAAAGAATAACTGGCAAG...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047865.14
CDS TCA 90 bp CTGCGACTTCTGGGGCAGGGAGCCATAATGGGTAGTTCTCGTGTGTaGGTCCAAACACATCACTGTCCTCTGAGGCCGTCTGAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LRLLGQGAIMGSSRV*VQTHHCPLRPSEKA
Trigger: AGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGACTCACACACGAGAACTACCCATTATGGCTCCCTGCCCCAGAAGTCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143506.8
CDS-3UTR CAA 90 bp TGGCCCATCCATATCTCTCCCAAGAGTTGCTCAGCTATCCAACAGAGAGATGGAGCTGTGGCCAGGTACTaGGATCGCTGTGAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: WPIHISPKSCSAIQQRDGAVARY*DRCEGL
Trigger: GAGACCCTCACAGCGATCCAAGTACCTGGCCACAGC...TCCATCTCTCTGTTGGATAGCTGAGCAACTCTTGGGAGAGATATGGATGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp ACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTGATCCTGTTATTTAGCCAGGGTACCTaGCCAGAGCCCCGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TYHKPPLYKPLQDCLILLFSQGT*PEPRLG
Trigger: GCCCAAGCGGGGCTCTGGCAAGGTACCCTGGCTAAA...TAACAGGATCAGACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS TCA 90 bp ATTGTTCTGGATCGCATCTGCCTCCCCAAACACATCACTGTCCTCTaGGGCCGTCTGAGAAAGCTTGCCCACGCTTCTCTTCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: IVLDRICLPKHITVL*GRLRKLAHASLLSS
Trigger: GCTGGAAAGAAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGGGAGGCAGATGCGATCCAGAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 90 bp AGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATGGACTACTaGGTTTTCATCTTGGGTCCGGCCGTGCTGCGACTTCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: RWCSRCHNVLEEMDY*VFILGPAVLRLLGQ
Trigger: CTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS CCA 90 bp GACGTGGTGATCGCCCGGGACAAAGTCCTTCCCTTGGGATGGAGGTaGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATGGACTACTGG +
Preference number: 5 (lower is better)
Translates to: DVVIARDKVLPLGWR*CSRCHNVLEEMDYW
Trigger: CCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGACTTTGTCCCGGGCGATCACCACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000062446.15
ENSMUST00000080658.12
ENSMUST00000102812.12
CDS-3UTR CAA 90 bp TCCAGCCATACTGCAGCTGCGCTGTCTGGACGAAGCCATGGGCAAGGTCGTTCAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG +
Preference number: 5 (lower is better)
Translates to: SSHTAAALSGRSHGQGRSGVTMF*KKWTTG
Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...TGAACGACCTTGCCCATGGCTTCGTCCAGACAGCGCAGCTGCAGTATGGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp TTCTACAGGCTGGGAAACCCGTTCCTTAGAGGCCACAGCACAGCCTCCCTTTCTCTTGCCAGTTATTCTTaGGGTCTGCTGTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: FYRLGNPFLRGHSTASLSLASYS*GLLCAW
Trigger: CCAAGCACACAGCAGACCCAAAGAATAACTGGCAAG...AGAAAGGGAGGCTGTGCTGTGGCCTCTAAGGAACGGGTTTCCCAGCCTGTAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCGGCTCGGAGCTCACCTaGCCAGAGCCCCGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: IRYKHKLQTFPHLQRVRRGSELT*PEPRLG
Trigger: GCCCAAGCGGGGCTCTGGCAAGGTGAGCTCCGAGCC...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTCCCAGCTTAAAGATTTaGGAAAGCGTGCCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: RVLKSTSSGEPLRRDGDIPSLKI*ESVPWA
Trigger: CGCCCAGGGCACGCTTTCCAAAATCTTTAAGCTGGG...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS CCA 90 bp TGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATaGACTACTGGGTTTTCATCTTGGGTCCGGCCGTGCTGCGACTTC +
Preference number: 5 (lower is better)
Translates to: WDGGGVRGVTMFLKK*TTGFSSWVRPCCDF
Trigger: GAAGTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp GAATATGCCTTCTCAGAGCATTCTTCATGGGCTGCCTTTGAATGCCAGCCCAGACATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG +
Preference number: 5 (lower is better)
Translates to: EYAFSEHSSWAAFECQPRHGPWY*LWPGTW
Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...TCTGGGCTGGCATTCAAAGGCAGCCCATGAAGAATGCTCTGAGAAGGCATATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp GGAAGAAAACAAAGGAAGCCTGGACCACACAGTCCCCTGCGCCATGCTCTCTGGGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG +
Preference number: 5 (lower is better)
Translates to: GRKQRKPGPHSPLRHALWGVTMF*KKWTTG
Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...CCAGAGAGCATGGCGCAGGGGACTGTGTGGTCCAGGCTTCCTTTGTTTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS TCA 90 bp TGTGAGGAAGAGAAAGAAACAGTGACGACAGAAACATTGACGTGGTaGTCGCCCGGGACAAAGTCCTTCCCTTGGGATGGAGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: CEEEKETVTTETLTW*SPGTKSFPWDGGGV
Trigger: AACACCACCTCCATCCCAAGGGAAGGACTTTGTCCCGGGCGATCACCACGTCAATGTTTCTGTCGTCACTGTTTCTTTCTCTTCCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000062446.15
ENSMUST00000080658.12
ENSMUST00000102812.12
CDS CCA 90 bp GCACTCTCTCCGGAGAACCAAGAGCCCCATGCCAGATTTCCTTACTaGCCTTCTCAGCAGATAATTCTCTCTTTCCAGAGTGGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: ALSPENQEPHARFPY*PSQQIILSFQSGFP
Trigger: TGGGAAACCACTCTGGAAAGAGAGAATTATCTGCTGAGAAGGCCAGTAAGGAAATCTGGCATGGGGCTCTTGGTTCTCCGGAGAGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
CDS-3UTR CAA 90 bp GCCAGTGTGGGGCTCTTTGGAAGGTCTACAGAAGGCATGCTAAATCAAAAGACACATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG +
Preference number: 5 (lower is better)
Translates to: ASVGLFGRSTEGMLNQKTHGPWY*LWPGTW
Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...TGTCTTTTGATTTAGCATGCCTTCTGTAGACCTTCCAAAGAGCCCCACACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp AGATGCGCCATGTCCTTGGACTCTCCCTGGGCTCTGAGAGGAAACAGGGTTCTTGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG +
Preference number: 5 (lower is better)
Translates to: RCAMSLDSPWALRGNRVLGVTMF*KKWTTG
Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...AAGAACCCTGTTTCCTCTCAGAGCCCAGGGAGAGTCCAAGGACATGGCGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS GCA 90 bp GACCTCCTCAAAAGCAGCACTCTCTCCGGAGAACCAAGAGCCCCATaGCAGATTTCCTTACTGGCCTTCTCAGCAGATAATTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: DLLKSSTLSGEPRAP*QISLLAFSADNSLF
Trigger: AAAGAGAGAATTATCTGCTGAGAAGGCCAGTAAGGAAATCTGGCATGGGGCTCTTGGTTCTCCGGAGAGAGTGCTGCTTTTGAGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114676.8
CDS-3UTR CAA 90 bp CTTAAGGACCTTTGCAGTATAGGAAAACAAGCCCTGCTCCTCCCCATCTATAAAAGCTGGGTGGGCGCCTaGCCAGTTATTCTTTGGGTC +
Preference number: 5 (lower is better)
Translates to: LKDLCSIGKQALLLPIYKSWVGA*PVILWV
Trigger: GACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCT...TTTATAGATGGGGAGGAGCAGGGCTTGTTTTCCTATACTGCAAAGGTCCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp AGGGTTCTTAAAAGCACCAGCTCTGGGGAGCCACTGAGGAGAGATGGTGACATTGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG +
Preference number: 5 (lower is better)
Translates to: RVLKSTSSGEPLRRDGDIGVTMF*KKWTTG
Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...AATGTCACCATCTCTCCTCAGTGGCTCCCCAGAGCTGGTGCTTTTAAGAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS CCA 90 bp TTCTCTTCTTTCCAGCCTCTCCTCGGTGAATCTCTCCATCCTTACTaGCCTTCTCAGCAGATAATTCTCTCTTTCCAGAGTGGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: FSSFQPLLGESLHPY*PSQQIILSFQSGFP
Trigger: TGGGAAACCACTCTGGAAAGAGAGAATTATCTGCTGAGAAGGCCAGTAAGGATGGAGAGATTCACCGAGGAGAGGCTGGAAAGAAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
ENSMUST00000143506.8
CDS-3UTR CAA 90 bp ATTAGATACAAACACAAGTTACAAACATTCCCACATTTACAGAGGGTGCGACGCTCAGCCGAGGTCCCATaGTTCTGGATCGCATCTGCC +
Preference number: 5 (lower is better)
Translates to: IRYKHKLQTFPHLQRVRRSAEVP*FWIASA
Trigger: GGCAGATGCGATCCAGAACAATGGGACCTCGGCTGA...GCGTCGCACCCTCTGTAAATGTGGGAATGTTTGTAACTTGTGTTTGTATCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091789.11
CDS-3UTR CAA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATACATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGG +
Preference number: 5 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAIHGPWY*LWPGTW
Trigger: CCAAGTACCTGGCCACAGCAAGTACCATGGACCATG...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp ACATACCACAAGCCCCCGTTGTATAAGCCACTCCAAGACTGTCTGATCCTGTTAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGG +
Preference number: 5 (lower is better)
Translates to: TYHKPPLYKPLQDCLILLGVTMF*KKWTTG
Trigger: CCCAGTAGTCCATTTCTTCAAGAACATTGTGACACC...TAACAGGATCAGACAGTCTTGGAGTGGCTTATACAACGGGGGCTTGTGGTATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000080658.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS-3UTR CAA 90 bp TTCTGGAAATTTCTTCCCTGCTTTTTCTCTTACCCTCACGTTATTGTGGCGATACCCAGCTTAAAGATTTaGGAAAGCGTGCCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: FWKFLPCFFSYPHVIVAIPSLKI*ESVPWA
Trigger: CGCCCAGGGCACGCTTTCCAAAATCTTTAAGCTGGG...TATCGCCACAATAACGTGAGGGTAAGAGAAAAAGCAGGGAAGAAATTTCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS CCA 72 bp GAGGCGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTaGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: EADQVGAVPWVS*VGALPVILWVC
Trigger: GCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CAA 72 bp GTAGTTCTCGTGTGTGAGTCCTTGCCAGAGCCCCGCTaGGGCGCACCCCTGTCACCGCTAAAGAAGCGCCCG +
Preference number: 6 (lower is better)
Translates to: VVLVCESLPEPR*GAPLSPLKKRP
Trigger: CGGGCGCTTCTTTAGCGGTGACAGGGGTGCGCCCAAGCGGGGCTCTGGCAAGGACTCACACACGAGAACTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000047865.14
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000102812.12
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
CDS CAA 90 bp GGCGGTTCCCTGGGTCAGCTGGGTGGGCGCCTTGCCAGTTATTCTTaGGGTCTGCTGTGTGCTTGGAGTCTGTCACCGCCGTGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: GGSLGQLGGRLASYS*GLLCAWSLSPPCPQ
Trigger: CTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS GCA 72 bp TGGGGGCGGTTCCCTGGGTCAGCTGGGTGGGCGCCTTaGCAGTTATTCTTTGGGTCTGCTGTGTGCTTGGAG +
Preference number: 6 (lower is better)
Translates to: WGRFPGSAGWAP*QLFFGSAVCLE
Trigger: CTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 72 bp CGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTGGGTaGGCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: RIKWGRFPGSAG*APCQLFFGSAV
Trigger: CACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CAA 72 bp GTGGGGGCGGTTCCCTGGGTCAGCTGGGTGGGCGCCTaGCCAGTTATTCTTTGGGTCTGCTGTGTGCTTGGA +
Preference number: 6 (lower is better)
Translates to: VGAVPWVSWVGA*PVILWVCCVLG
Trigger: TCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CAA 90 bp GCGGATCAAGTGGGGGCGGTTCCCTGGGTCAGCTGGGTGGGCGCCTaGCCAGTTATTCTTTGGGTCTGCTGTGTGCTTGGAGTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: ADQVGAVPWVSWVGA*PVILWVCCVLGVCH
Trigger: GTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS GCA 72 bp AAGCGCCCGATGGAGTCAAGGATGCCCGTGTCTCTGTaGCTTGGGAGGAAGCCATGCCTGGCATGGTCCATG +
Preference number: 6 (lower is better)
Translates to: KRPMESRMPVSL*LGRKPCLAWSM
Trigger: CATGGACCATGCCAGGCATGGCTTCCTCCCAAGGCACAGAGACACGGGCATCCTTGACTCCATCGGGCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000091789.11
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS CCA 72 bp TCGGGAAAAGAGGCGGATCAAGTGGGGGCGGTTCCCTaGGTCAGCTGGGTGGGCGCCTTGCCAGTTATTCTT +
Preference number: 6 (lower is better)
Translates to: SGKEADQVGAVP*VSWVGALPVIL
Trigger: AAGAATAACTGGCAAGGCGCCCACCCAGCTGACCCAGGGAACCGCCCCCACTTGATCCGCCTCTTTTCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 72 bp CCAGGCCTCCGGAAGCTGCTGTGGGGTCTTCTTGGATaGTCTGAAGCTCGTCGGACTCTGAGGGCCTGTCTT +
Preference number: 6 (lower is better)
Translates to: PGLRKLLWGLLG*SEARRTLRACL
Trigger: AAGACAGGCCCTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAGACCCCACAGCAGCTTCCGGAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CAA 90 bp GCTGGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTGCTaGGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGTCCCATTGTTC +
Preference number: 6 (lower is better)
Translates to: AGWAPCQLFFGSAVC*ESVTAVSSAEVPLF
Trigger: GAACAATGGGACCTCGGCTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS GCA 72 bp AGCTGGGTGGGCGCCTTGCCAGTTATTCTTTGGGTCTaGTGTGTGCTTGGAGTCTGTCACCGCCGTGTCCTC +
Preference number: 6 (lower is better)
Translates to: SWVGALPVILWV*CVLGVCHRRVL
Trigger: GAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGCCCACCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 72 bp GTCACCGCCGTGTCCTCAGCCGAGGTCCCATTGTTCTaGATCGCATCTGCCTCCCCAAACACATCACTGTCC +
Preference number: 6 (lower is better)
Translates to: VTAVSSAEVPLF*IASASPNTSLS
Trigger: GGACAGTGATGTGTTTGGGGAGGCAGATGCGATCCAGAACAATGGGACCTCGGCTGAGGACACGGCGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 72 bp CGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTGCTTaGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGTCC +
Preference number: 6 (lower is better)
Translates to: RLASYSLGLLCA*SLSPPCPQPRS
Trigger: GGACCTCGGCTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 72 bp TTTATAGTCGGAAGCTCTGCCTCCGTAGCCAAATCCTaGCTTCTGCCCCTCGGCCCCCTTCCCTTGGGATGG +
Preference number: 6 (lower is better)
Translates to: FIVGSSASVAKS*LLPLGPLPLGW
Trigger: CCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGAGGCAGAGCTTCCGACTATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000132369.3
ENSMUST00000153478.9
CDS CAA 72 bp GCGCCTTGCCAGTTATTCTTTGGGTCTGCTGTGTGCTaGGAGTCTGTCACCGCCGTGTCCTCAGCCGAGGTC +
Preference number: 6 (lower is better)
Translates to: APCQLFFGSAVC*ESVTAVSSAEV
Trigger: GACCTCGGCTGAGGACACGGCGGTGACAGACTCCAAGCACACAGCAGACCCAAAGAATAACTGGCAAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CAA 72 bp AGCTCGTCGGACTCTGAGGGCCTGTCTTTGAAGGTGTaGTCCTCCCTTCCCGGGGCATCTCGGGAAAAGAGG +
Preference number: 6 (lower is better)
Translates to: SSSDSEGLSLKV*SSLPGASREKR
Trigger: CCTCTTTTCCCGAGATGCCCCGGGAAGGGAGGACAACACCTTCAAAGACAGGCCCTCAGAGTCCGACGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CAA 90 bp GCCTCCGTAGCCAAATCCTGGCTTCTGCCCCTCGGCCCCCTTCCCTaGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAA +
Preference number: 6 (lower is better)
Translates to: ASVAKSWLLPLGPLP*GWRWCSRCHNVLEE
Trigger: TTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAGCCAGGATTTGGCTACGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000132369.3
ENSMUST00000153478.9
CDS TCA 72 bp CCTCCGGAAGCTGCTGTGGGGTCTTCTTGGATGGTCTaGAGCTCGTCGGACTCTGAGGGCCTGTCTTTGAAG +
Preference number: 6 (lower is better)
Translates to: PPEAAVGSSWMV*SSSDSEGLSLK
Trigger: CTTCAAAGACAGGCCCTCAGAGTCCGACGAGCTTCAGACCATCCAAGAAGACCCCACAGCAGCTTCCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 72 bp TGTGCCTTGGGAGGAAGCCATGCCTGGCATGGTCCATaGTACTTGCTGTGGCCAGGTACTTGGATCGCTGTG +
Preference number: 6 (lower is better)
Translates to: CALGGSHAWHGP*YLLWPGTWIAV
Trigger: CACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCAGGCATGGCTTCCTCCCAAGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000091789.11
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS CCA 72 bp TCCTGGCTTCTGCCCCTCGGCCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: SWLLPLGPLPLG*RWCSRCHNVLE
Trigger: TTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAGCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000132369.3
ENSMUST00000153478.9
CDS CAA 72 bp TTGGGAGGAAGCCATGCCTGGCATGGTCCATGGTACTaGCTGTGGCCAGGTACTTGGATCGCTGTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: LGGSHAWHGPWY*LWPGTWIAVRV
Trigger: GACCCTCACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCAGGCATGGCTTCCTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000091789.11
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS TCA 72 bp GCCTCCCCAAACACATCACTGTCCTCTGAGGCCGTCTaGGAAAGCTTGCCCACGCTTCTCTTCTTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: ASPNTSLSSEAV*ESLPTLLFFPA
Trigger: GGCTGGAAAGAAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 72 bp GGAAGCCATGCCTGGCATGGTCCATGGTACTTGCTGTaGCCAGGTACTTGGATCGCTGTGAGGGTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: GSHAWHGPWYLL*PGTWIAVRVSS
Trigger: AGAAGAGACCCTCACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCAGGCATGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000091789.11
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS TCA 72 bp TTTTGGAAAGCGTGCCCTGGGCGTCGTAGGCCCCCTTaGATCCCTTGTGAGCCGATTTATAGTCGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: FWKACPGRRRPP*IPCEPIYSRKL
Trigger: GAGCTTCCGACTATAAATCGGCTCACAAGGGATTCAAGGGGGCCTACGACGCCCAGGGCACGCTTTCCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000102812.12
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000142850.9
ENSMUST00000153478.9
CDS TCA 72 bp CTGGGGCAGGGAGCCATAATGGGTAGTTCTCGTGTGTaGGTCCAAACACATCACTGTCCTCTGAGGCCGTCT +
Preference number: 6 (lower is better)
Translates to: LGQGAIMGSSRV*VQTHHCPLRPS
Trigger: AGACGGCCTCAGAGGACAGTGATGTGTTTGGACTCACACACGAGAACTACCCATTATGGCTCCCTGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143506.8
CDS GCA 72 bp ACACATCACTGTCCTCTGAGGCCGTCTGAGAAAGCTTaGCCACGCTTCTCTTCTTTCCAGCCTCTCCTCGGT +
Preference number: 6 (lower is better)
Translates to: THHCPLRPSEKA*PRFSSFQPLLG
Trigger: ACCGAGGAGAGGCTGGAAAGAAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
ENSMUST00000143506.8
CDS CCA 72 bp TCTGCTGAGGGACAGGCCTCTCCCCTTCCCTTGGGATaGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: SAEGQASPLPLG*RWCSRCHNVLE
Trigger: TTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGAGAGGCCTGTCCCTCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000123251.9
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
CDS CCA 72 bp CTTCTGCCCCTCGGCCCCCTTCCCTTGGGATGGAGGTaGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATG +
Preference number: 6 (lower is better)
Translates to: LLPLGPLPLGWR*CSRCHNVLEEM
Trigger: CATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGGCCGAGGGGCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000132369.3
ENSMUST00000153478.9
CDS TCA 72 bp GTGAGTCCAAACACATCACTGTCCTCTGAGGCCGTCTaGGAAAGCTTGCCCACGCTTCTCTTCTTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: VSPNTSLSSEAV*ESLPTLLFFPA
Trigger: GGCTGGAAAGAAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143506.8
CDS CCA 72 bp ATGTTCTTGAAGAAATGGACTACTGGGTTTTCATCTTaGGTCCGGCCGTGCTGCGACTTCTGGGGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: MFLKKWTTGFSS*VRPCCDFWGRE
Trigger: CTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS CCA 72 bp TGGCATGGTCCATGGTACTTGCTGTGGCCAGGTACTTaGATCGCTGTGAGGGTCTCTTCTGTGATGCCATCA +
Preference number: 6 (lower is better)
Translates to: WHGPWYLLWPGT*IAVRVSSVMPS
Trigger: TGATGGCATCACAGAAGAGACCCTCACAGCGATCCAAGTACCTGGCCACAGCAAGTACCATGGACCATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
CDS CCA 72 bp GAGGGACAGGCCTCTCCCCTTCCCTTGGGATGGAGGTaGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATG +
Preference number: 6 (lower is better)
Translates to: EGQASPLPLGWR*CSRCHNVLEEM
Trigger: CATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGGGAGAGGCCTGTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000123251.9
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
CDS CAA 72 bp ATTGACGTGGTGATCGCCCGGGACAAAGTCCTTCCCTaGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTT +
Preference number: 6 (lower is better)
Translates to: IDVVIARDKVLP*GWRWCSRCHNV
Trigger: AACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGACTTTGTCCCGGGCGATCACCACGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000062446.15
ENSMUST00000080658.12
ENSMUST00000102812.12
CDS CAA 90 bp CCCTTCCCTTGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGGTTTTCATCTTGGGTCCGGCCGTGC +
Preference number: 6 (lower is better)
Translates to: PFPWDGGGVRGVTMF*KKWTTGFSSWVRPC
Trigger: GCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000047865.14
ENSMUST00000075372.13
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS TCA 72 bp TTGCCCACGCTTCTCTTCTTTCCAGCCTCTCCTCGGTaGATCTCTCCATCCTTACTGGCCTTCTCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: LPTLLFFPASPR*ISPSLLAFSAD
Trigger: ATCTGCTGAGAAGGCCAGTAAGGATGGAGAGATTCACCGAGGAGAGGCTGGAAAGAAGAGAAGCGTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
ENSMUST00000143506.8
CDS TCA 72 bp GTTCTCGTGTGTGAGTCCAAACACATCACTGTCCTCTaGGGCCGTCTGAGAAAGCTTGCCCACGCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: VLVCESKHITVL*GRLRKLAHASL
Trigger: AAGAGAAGCGTGGGCAAGCTTTCTCAGACGGCCTCAGAGGACAGTGATGTGTTTGGACTCACACACGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143506.8
CDS CAA 72 bp AATGTTCTTGAAGAAATGGACTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGACTTCTGGGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: NVLEEMDYWVFI*GPAVLRLLGQG
Trigger: TCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS CAA 90 bp AGGTGTCACAATGTTCTTGAAGAAATGGACTACTGGGTTTTCATCTaGGGTCCGGCCGTGCTGCGACTTCTGGGGCAGGGAGCCATAATG +
Preference number: 6 (lower is better)
Translates to: RCHNVLEEMDYWVFI*GPAVLRLLGQGAIM
Trigger: CATTATGGCTCCCTGCCCCAGAAGTCGCAGCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9
CDS CAA 90 bp TCCTTCCCTTGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGGTTTTCATCTTGGGTCCGGCCGTGC +
Preference number: 6 (lower is better)
Translates to: SFPWDGGGVRGVTMF*KKWTTGFSSWVRPC
Trigger: GCACGGCCGGACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000062446.15
ENSMUST00000080658.12
ENSMUST00000102812.12
CDS CAA 90 bp GACAGAAACATTGACGTGGTGATCGCCCGGGACAAAGTCCTTCCCTaGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTTGAAGAA +
Preference number: 6 (lower is better)
Translates to: DRNIDVVIARDKVLP*GWRWCSRCHNVLEE
Trigger: TTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGACTTTGTCCCGGGCGATCACCACGTCAATGTTTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000062446.15
ENSMUST00000080658.12
ENSMUST00000102812.12
CDS CCA 72 bp ATCGCCCGGGACAAAGTCCTTCCCTTGGGATGGAGGTaGTGTTCGAGGTGTCACAATGTTCTTGAAGAAATG +
Preference number: 6 (lower is better)
Translates to: IARDKVLPLGWR*CSRCHNVLEEM
Trigger: CATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCAAGGGAAGGACTTTGTCCCGGGCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000062446.15
ENSMUST00000080658.12
ENSMUST00000102812.12
CDS CCA 72 bp TTCCAGCCTCTCCTCGGTGAATCTCTCCATCCTTACTaGCCTTCTCAGCAGATAATTCTCTCTTTCCAGAGT +
Preference number: 6 (lower is better)
Translates to: FQPLLGESLHPY*PSQQIILSFQS
Trigger: ACTCTGGAAAGAGAGAATTATCTGCTGAGAAGGCCAGTAAGGATGGAGAGATTCACCGAGGAGAGGCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047865.14
ENSMUST00000091789.11
ENSMUST00000143506.8
CDS CAA 72 bp TGGGATGGAGGTGGTGTTCGAGGTGTCACAATGTTCTaGAAGAAATGGACTACTGGGTTTTCATCTTGGGTC +
Preference number: 6 (lower is better)
Translates to: WDGGGVRGVTMF*KKWTTGFSSWV
Trigger: GACCCAAGATGAAAACCCAGTAGTCCATTTCTTCAAGAACATTGTGACACCTCGAACACCACCTCCATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000047865.14
ENSMUST00000062446.15
ENSMUST00000075372.13
ENSMUST00000080658.12
ENSMUST00000102812.12
ENSMUST00000114674.11
ENSMUST00000123251.9
ENSMUST00000132369.3
ENSMUST00000133193.9
ENSMUST00000142850.9
ENSMUST00000152071.9
ENSMUST00000153478.9