Pregenerated sensors for MBOAT7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035596Ensembl transcript IDs: ENSMUST00000038608.14, ENSMUST00000118710.3, ENSMUST00000127106.8, ENSMUST00000128364.8, ENSMUST00000206343.2, ENSMUST00000206379.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAAGAGCGGGGCTGGCCAGGCGCGGCGCAGCAGGGGCCTCAGGCTaGGCACGGCTTCCGGGAAGGGCTGTTCCAGCCAATCCAGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: QRAGLARRGAAGASG*ARLPGRAVPANPGR Trigger: CCTACCTGGATTGGCTGGAACAGCCCTTCCCGGAAGCCGTGCCCAGCCTGAGGCCCCTGCTGCGCCGCGCCTGGCCAGCCCCGCTCTTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR CCA 90 bp | GAAGAGATGGGAGGACAGCAGGAAGAGCAGGCCAAAGAGCGGGGCTaGCCAGGCGCGGCGCAGCAGGGGCCTCAGGCTGGGCACGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: EEMGGQQEEQAKERG*PGAAQQGPQAGHGF Trigger: GAAGCCGTGCCCAGCCTGAGGCCCCTGCTGCGCCGCGCCTGGCCAGCCCCGCTCTTTGGCCTGCTCTTCCTGCTGTCCTCCCATCTCTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR GCA 90 bp | CCCGGGCTTTGGCAGCCACAGGGTAGGCCCCGAAGCCCGCGGCAATaGAACCGCACTCGGCCGCAATCCAGGCAACGTAGAAGCGCATGC | + |
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Preference number: 1 (lower is better) Translates to: PGLWQPQGRPRSPRQ*NRTRPQSRQRRSAC Trigger: GCATGCGCTTCTACGTTGCCTGGATTGCGGCCGAGTGCGGTTGCATTGCCGCGGGCTTCGGGGCCTACCCTGTGGCTGCCAAAGCCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR TCA 90 bp | GTCCCAGGCTTTCTGGCCCCCGGGGCTCAGGTGTCTCCGCAAGGCTaGCTCCAAATAGCCCTCAGCAGCCAGGCACAGCGGGATGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: VPGFLAPGAQVSPQG*LQIALSSQAQRDGH Trigger: ATGACCATCCCGCTGTGCCTGGCTGCTGAGGGCTATTTGGAGTCAGCCTTGCGGAGACACCTGAGCCCCGGGGGCCAGAAAGCCTGGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000127106.8 ENSMUST00000128364.8 |
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| 3UTR CCA 90 bp | GCATGCGGAAGGCGAAGAAGACCGGGATCATGTAGAAGAGGCGGGTaGGCAGCGGGCGGGCGTAGAAGGCGTCCTCACGCACAGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: ACGRRRRPGSCRRGG*AAGGRRRRPHAQLP Trigger: TGGAAGCTGTGCGTGAGGACGCCTTCTACGCCCGCCCGCTGCCCACCCGCCTCTTCTACATGATCCCGGTCTTCTTCGCCTTCCGCATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR CCA 90 bp | CCTCCCCTCTCCCAGAACCTGGCCCTGAAGTTCCTGCCCCCATACTaGGGACCCACTGGGAGTCTGTCTAAGATGCCAGATGACCACTGG | + |
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Preference number: 1 (lower is better) Translates to: PPLSQNLALKFLPPY*GPTGSLSKMPDDHW Trigger: CCAGTGGTCATCTGGCATCTTAGACAGACTCCCAGTGGGTCCCCAGTATGGGGGCAGGAACTTCAGGGCCAGGTTCTGGGAGAGGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR GCA 90 bp | CAATGCAACCGCACTCGGCCGCAATCCAGGCAACGTAGAAGCGCATaGGGAAGGCGAAGAAGACCGGGATCATGTAGAAGAGGCGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: QCNRTRPQSRQRRSA*GRRRRPGSCRRGGW Trigger: CCACCCGCCTCTTCTACATGATCCCGGTCTTCTTCGCCTTCCGCATGCGCTTCTACGTTGCCTGGATTGCGGCCGAGTGCGGTTGCATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR TCA 90 bp | CTGACTCCAAATAGCCCTCAGCAGCCAGGCACAGCGGGATGGTCATaGAGCTTAGGTAGTAACCAGGGTGGAGGCCATGCCAGTAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: LTPNSPQQPGTAGWS*SLGSNQGGGHASRH Trigger: GTGCCTACTGGCATGGCCTCCACCCTGGTTACTACCTAAGCTTCATGACCATCCCGCTGTGCCTGGCTGCTGAGGGCTATTTGGAGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127106.8 ENSMUST00000128364.8 |
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| 3UTR GCA 90 bp | TGTACTGTGCCAGCCACCACTGCACGGTCATGTTCCAGTATCGCATaGCATCCCGCACACGCACGCAGAAGTCTGTGCCATAGCAGTCGA | + |
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Preference number: 1 (lower is better) Translates to: CTVPATTARSCSSIA*HPAHARRSLCHSSR Trigger: TCGACTGCTATGGCACAGACTTCTGCGTGCGTGTGCGGGATGGCATGCGATACTGGAACATGACCGTGCAGTGGTGGCTGGCACAGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR CCA 90 bp | GGTAGTAACCAGGGTGGAGGCCATGCCAGTAGGCACTCAACAGCATaGTCCAGGCACTCCTCAAAACGTAGGAGCGGAAAGGTGCGCTCT | + |
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Preference number: 1 (lower is better) Translates to: GSNQGGGHASRHSTA*SRHSSKRRSGKVRS Trigger: AGAGCGCACCTTTCCGCTCCTACGTTTTGAGGAGTGCCTGGACCATGCTGTTGAGTGCCTACTGGCATGGCCTCCACCCTGGTTACTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR GCA 90 bp | CAACAGCATGGTCCAGGCACTCCTCAAAACGTAGGAGCGGAAAGGTaGGCTCTTGTAGATGTACTGTGCCAGCCACCACTGCACGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: QQHGPGTPQNVGAER*ALVDVLCQPPLHGH Trigger: ATGACCGTGCAGTGGTGGCTGGCACAGTACATCTACAAGAGCGCACCTTTCCGCTCCTACGTTTTGAGGAGTGCCTGGACCATGCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR GCA 90 bp | CCTCAAAACGTAGGAGCGGAAAGGTGCGCTCTTGTAGATGTACTGTaGCAGCCACCACTGCACGGTCATGTTCCAGTATCGCATGCCATC | + |
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Preference number: 1 (lower is better) Translates to: PQNVGAERCALVDVL*QPPLHGHVPVSHAI Trigger: GATGGCATGCGATACTGGAACATGACCGTGCAGTGGTGGCTGGCACAGTACATCTACAAGAGCGCACCTTTCCGCTCCTACGTTTTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR CCA 90 bp | GCACACGCACGCAGAAGTCTGTGCCATAGCAGTCGATGTTACGGATaGTCTCATAGTCATACTCCAGGGAAGCTGCAATCTCCGGACTGC | + |
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Preference number: 1 (lower is better) Translates to: AHARRSLCHSSRCYG*SHSHTPGKLQSPDC Trigger: GCAGTCCGGAGATTGCAGCTTCCCTGGAGTATGACTATGAGACCATCCGTAACATCGACTGCTATGGCACAGACTTCTGCGTGCGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR GCA 90 bp | TGTTCCAGTATCGCATGCCATCCCGCACACGCACGCAGAAGTCTGTaGCATAGCAGTCGATGTTACGGATGGTCTCATAGTCATACTCCA | + |
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Preference number: 1 (lower is better) Translates to: CSSIACHPAHARRSL*HSSRCYGWSHSHTP Trigger: TGGAGTATGACTATGAGACCATCCGTAACATCGACTGCTATGGCACAGACTTCTGCGTGCGTGTGCGGGATGGCATGCGATACTGGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR CCA 90 bp | CCCAGAAATGGCTCAGGCAGAAGCTGCTGTAAGAGCAAGCTCCCCTaGGGCTTCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACC | + |
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Preference number: 1 (lower is better) Translates to: PRNGSGRSCCKSKLP*GFSHFSFSFSMCKT Trigger: GGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGAAGCCCCAGGGGAGCTTGCTCTTACAGCAGCTTCTGCCTGAGCCATTTCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR TCA 90 bp | TTATTGGGAAAGCTTTATACATTCTGGCCTGTCACAGGCCAAGGATaGCACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LLGKLYTFWPVTGQG*HWVVGCMGSPEMAQ Trigger: CTGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCTGTGACAGGCCAGAATGTATAAAGCTTTCCCAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR CCA 90 bp | ATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTaGCTTTTTGAACATCTGAAGATTGTTGCAGAGATAATAGGTTCA | + |
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Preference number: 1 (lower is better) Translates to: MPDDHWSLQGHFWEV*LFEHLKIVAEIIGS Trigger: TGAACCTATTATCTCTGCAACAATCTTCAGATGTTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGGTAGTAACCAGGGTGGAGGCCATGCCAGTAGGCACTCAACAGCATGGTCCACGCACAGCTTCCAGTaGGAAGAGATGGGAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: LGSNQGGGHASRHSTAWSTHSFQ*EEMGGQ Trigger: CTGTCCTCCCATCTCTTCCCACTGGAAGCTGTGCGT...GGACCATGCTGTTGAGTGCCTACTGGCATGGCCTCCACCCTGGTTACTACCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR CAA 90 bp | TACATTCTGGCCTGTCACAGGCCAAGGATGACACTGGGTGGTAGGTaGTATGGGGAGCCCAGAAATGGCTCAGGCAGAAGCTGCTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: YILACHRPRMTLGGR*YGEPRNGSGRSCCK Trigger: CTTACAGCAGCTTCTGCCTGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCTGTGACAGGCCAGAATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGCAGGCCAATGCAGCAGAGCTCACTCTTCCCGGAGCTTTTCCTTCGCTTAAAAGGTCAAGATGCTaGGAGAGCCCAAGAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: GRQANAAELTLPGAFPSLKRSRC*ESPREG Trigger: TCCTTCTCTTGGGCTCTCTCAGCATCTTGACCTTTT...AAGCGAAGGAAAAGCTCCGGGAAGAGTGAGCTCTGCTGCATTGGCCTGCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGGCTTCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTCCCAGAACCTGGCCCTaGAGTTCCTGCCCCCATACT | + |
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Preference number: 2 (lower is better) Translates to: PGASHILASPSACVRPWSPRTWP*SSCPHT Trigger: AGTATGGGGGCAGGAACTTCAGGGCCAGGTTCTGGG...AGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGAAGCCCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAATGGGCCTGTCATGATGCTATTTCCTTTCTCTaGGCCAGATGCAGATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LFQPIQVGAVAEEWACHDAISFL*ARCRSW Trigger: CCAGGATCTGCATCTGGCTCAGAGAAAGGAAATAGC...ATCATGACAGGCCCATTCTTCCGCTACCGCACCTACCTGGATTGGCTGGAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127106.8 ENSMUST00000206343.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTACGGATGGTCTCATAGTCATACTCCAGGGAAGCTGCAATCTCCGGACTGCGCTATTTCCTTTCTCTaGGCCAGATGCAGATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: CYGWSHSHTPGKLQSPDCAISFL*ARCRSW Trigger: CCAGGATCTGCATCTGGCTCAGAGAAAGGAAATAGC...GCAGTCCGGAGATTGCAGCTTCCCTGGAGTATGACTATGAGACCATCCGTAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | AGGATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCAGGCAGAGCATGTGTAAGACCATaGTCTCTGAAACACTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: RMTLGGRLYGEPRNGSGRACVRP*SLKHWC Trigger: ACACCAGTGTTTCAGAGACCATGGTCTTACACATGC...TCTGCCTGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCTGTCATGATTCCCACGTAACAGTAGCTATAGCTGAGTGTCTCCATCAAAGCGTAGGCTCCTTGTaGAAGCCGGAGGCTATTTCC | + |
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Preference number: 2 (lower is better) Translates to: WACHDSHVTVAIAECLHQSVGSL*KPEAIS Trigger: GGAAATAGCCTCCGGCTTCCACAAGGAGCCTACGCT...TTGATGGAGACACTCAGCTATAGCTACTGTTACGTGGGAATCATGACAGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127106.8 ENSMUST00000206343.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGCTTCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTGCGGTAGCGGAAGAATaGGCCTGTCATGATTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PGASHILASPSACVRPWSAVAEE*ACHDSH Trigger: GTGGGAATCATGACAGGCCCATTCTTCCGCTACCGC...AGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGAAGCCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | AGGATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCAGGCAGACTGCAAGGGCATTTTTaGGAAGTGTGGCTTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: RMTLGGRLYGEPRNGSGRLQGHF*EVWLFE Trigger: TTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAG...TCTGCCTGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCATGTGTAAGACCATGGTCTCTGAAACACTGGTGTGATGATAAAAACAAATGTAGAAGAGGCGGGTaGGCAGCGGGCGGGCGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SACVRPWSLKHWCDDKNKCRRGG*AAGGRR Trigger: TCTACGCCCGCCCGCTGCCCACCCGCCTCTTCTACA...TTTGTTTTTATCATCACACCAGTGTTTCAGAGACCATGGTCTTACACATGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGGTAGTAACCAGGGTGGAGGCCATGCCAGTAGGCACTCAACAGCATGGTCCCAAACAAGGGATTCTTaGTGGGTAAAGGAAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: LGSNQGGGHASRHSTAWSQTRDS*WVKETN Trigger: GTTTGTTTCCTTTACCCAGCAAGAATCCCTTGTTTG...GGACCATGCTGTTGAGTGCCTACTGGCATGGCCTCCACCCTGGTTACTACCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTCTGAAACATTCCTGCCCCCATACTaGGGACCCACTGGGAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: FSHFSFSFSMCKTMVSETFLPPY*GPTGSL Trigger: CAGACTCCCAGTGGGTCCCCAGTATGGGGGCAGGAA...TGTTTCAGAGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | AGGATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCAGGCAGAACAAGGGATTCTTGCTaGGTAAAGGAAACAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: RMTLGGRLYGEPRNGSGRTRDSC*VKETNK Trigger: TTTGTTTGTTTCCTTTACCCAGCAAGAATCCCTTGT...TCTGCCTGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTGAAGATTGTTGCAGAGATAATAGGTTCAAGAGTGGATAGTAATACCCTGAGCTTTTCCTTCGCTTaGCTGCTGGTGGCCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: HLKIVAEIIGSRVDSNTLSFSFA*LLVAWD Trigger: ATCCCAGGCCACCAGCAGCCAAGCGAAGGAAAAGCT...CAGGGTATTACTATCCACTCTTGAACCTATTATCTCTGCAACAATCTTCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR CAA 90 bp | CAAGAGAAGGATACCTTAGCTTTAAATAGAAGGCAGAGGAATTATTaGGGAAGAGGGGATCCTCTCCAGGCTCTTAGCCAAACAAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: QEKDTLALNRRQRNY*GRGDPLQALSQTRD Trigger: ATCCCTTGTTTGGCTAAGAGCCTGGAGAGGATCCCCTCTTCCCAAATAATTCCTCTGCCTTCTATTTAAAGCTAAGGTATCCTTCTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGGCTTCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTCAAACAAGGGATTCTTaGTGGGTAAAGGAAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: PGASHILASPSACVRPWSQTRDS*WVKETN Trigger: GTTTGTTTCCTTTACCCAGCAAGAATCCCTTGTTTG...AGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGAAGCCCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR GCA 90 bp | CATCTGAAGATTGTTGCAGAGATAATAGGTTCAAGAGTGGATAGTAATACCCTGGGAGTCTGTCTAAGATaGCAGATGACCACTGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HLKIVAEIIGSRVDSNTLGVCLR*QMTTGP Trigger: GGGACCAGTGGTCATCTGGCATCTTAGACAGACTCC...CAGGGTATTACTATCCACTCTTGAACCTATTATCTCTGCAACAATCTTCAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTTAGCTTTAAATAGAAGGCAGAGGAATTATTTGGGAAGAGGGGATCCTCTCAACAGTAGCTATAGCTaGGTGTCTCCATCAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TLALNRRQRNYLGRGDPLNSSYS*VSPSKR Trigger: CCTCTTTGATGGAGACACTCAGCTATAGCTACTGTT...GAGAGGATCCCCTCTTCCCAAATAATTCCTCTGCCTTCTATTTAAAGCTAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCATGTGTAAGACCATGGTCTCTGAAACACTGGTGTGATGATAAAAACAAAGGCAGAGGAATTATTTaGGAAGAGGGGATCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SACVRPWSLKHWCDDKNKGRGII*EEGILS Trigger: GGAGAGGATCCCCTCTTCCCAAATAATTCCTCTGCC...TTTGTTTTTATCATCACACCAGTGTTTCAGAGACCATGGTCTTACACATGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCATGTGTAAGACCATGGTCTCTGAAACACTGGTGTGATGATAAAAACAAACTGCAAGGGCATTTTTaGGAAGTGTGGCTTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: SACVRPWSLKHWCDDKNKLQGHF*EVWLFE Trigger: TTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAG...TTTGTTTTTATCATCACACCAGTGTTTCAGAGACCATGGTCTTACACATGCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTGAAGATTGTTGCAGAGATAATAGGTTCAAGAGTGGATAGTAATACCCTGACAAGGGATTCTTGCTaGGTAAAGGAAACAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: HLKIVAEIIGSRVDSNTLTRDSC*VKETNK Trigger: TTTGTTTGTTTCCTTTACCCAGCAAGAATCCCTTGT...CAGGGTATTACTATCCACTCTTGAACCTATTATCTCTGCAACAATCTTCAGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
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| 3UTR CCA 72 bp | GGGCTGGCCAGGCGCGGCGCAGCAGGGGCCTCAGGCTaGGCACGGCTTCCGGGAAGGGCTGTTCCAGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: GLARRGAAGASG*ARLPGRAVPAN Trigger: ATTGGCTGGAACAGCCCTTCCCGGAAGCCGTGCCCAGCCTGAGGCCCCTGCTGCGCCGCGCCTGGCCAGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR CCA 72 bp | GGAGGACAGCAGGAAGAGCAGGCCAAAGAGCGGGGCTaGCCAGGCGCGGCGCAGCAGGGGCCTCAGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: GGQQEEQAKERG*PGAAQQGPQAG Trigger: CCCAGCCTGAGGCCCCTGCTGCGCCGCGCCTGGCCAGCCCCGCTCTTTGGCCTGCTCTTCCTGCTGTCCTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR GCA 72 bp | TGGCAGCCACAGGGTAGGCCCCGAAGCCCGCGGCAATaGAACCGCACTCGGCCGCAATCCAGGCAACGTAGA | + |
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Preference number: 3 (lower is better) Translates to: WQPQGRPRSPRQ*NRTRPQSRQRR Trigger: TCTACGTTGCCTGGATTGCGGCCGAGTGCGGTTGCATTGCCGCGGGCTTCGGGGCCTACCCTGTGGCTGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR GCA 72 bp | CCAGCCACCACTGCACGGTCATGTTCCAGTATCGCATaGCATCCCGCACACGCACGCAGAAGTCTGTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: PATTARSCSSIA*HPAHARRSLCH Trigger: ATGGCACAGACTTCTGCGTGCGTGTGCGGGATGGCATGCGATACTGGAACATGACCGTGCAGTGGTGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR TCA 72 bp | AATAGCCCTCAGCAGCCAGGCACAGCGGGATGGTCATaGAGCTTAGGTAGTAACCAGGGTGGAGGCCATGCC | + |
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Preference number: 3 (lower is better) Translates to: NSPQQPGTAGWS*SLGSNQGGGHA Trigger: GGCATGGCCTCCACCCTGGTTACTACCTAAGCTTCATGACCATCCCGCTGTGCCTGGCTGCTGAGGGCTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127106.8 ENSMUST00000128364.8 |
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| 3UTR GCA 72 bp | CGCACTCGGCCGCAATCCAGGCAACGTAGAAGCGCATaGGGAAGGCGAAGAAGACCGGGATCATGTAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RTRPQSRQRRSA*GRRRRPGSCRR Trigger: TCTTCTACATGATCCCGGTCTTCTTCGCCTTCCGCATGCGCTTCTACGTTGCCTGGATTGCGGCCGAGTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
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| 3UTR CCA 72 bp | TCCCAGAACCTGGCCCTGAAGTTCCTGCCCCCATACTaGGGACCCACTGGGAGTCTGTCTAAGATGCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SQNLALKFLPPY*GPTGSLSKMPD Trigger: ATCTGGCATCTTAGACAGACTCCCAGTGGGTCCCCAGTATGGGGGCAGGAACTTCAGGGCCAGGTTCTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| 3UTR GCA 72 bp | GGTCCAGGCACTCCTCAAAACGTAGGAGCGGAAAGGTaGGCTCTTGTAGATGTACTGTGCCAGCCACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GPGTPQNVGAER*ALVDVLCQPPL Trigger: CAGTGGTGGCTGGCACAGTACATCTACAAGAGCGCACCTTTCCGCTCCTACGTTTTGAGGAGTGCCTGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
||
| 3UTR GCA 72 bp | GTAGGAGCGGAAAGGTGCGCTCTTGTAGATGTACTGTaGCAGCCACCACTGCACGGTCATGTTCCAGTATCG | + |
|
Preference number: 3 (lower is better) Translates to: VGAERCALVDVL*QPPLHGHVPVS Trigger: CGATACTGGAACATGACCGTGCAGTGGTGGCTGGCACAGTACATCTACAAGAGCGCACCTTTCCGCTCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
||
| 3UTR GCA 72 bp | ATCGCATGCCATCCCGCACACGCACGCAGAAGTCTGTaGCATAGCAGTCGATGTTACGGATGGTCTCATAGT | + |
|
Preference number: 3 (lower is better) Translates to: IACHPAHARRSL*HSSRCYGWSHS Trigger: ACTATGAGACCATCCGTAACATCGACTGCTATGGCACAGACTTCTGCGTGCGTGTGCGGGATGGCATGCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
||
| 3UTR CCA 72 bp | CCCACTGGGAGTCTGTCTAAGATGCCAGATGACCACTaGTCCCTGCAAGGGCATTTTTGGGAAGTGTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PTGSLSKMPDDH*SLQGHFWEVWL Trigger: AAGCCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCATCTTAGACAGACTCCCAGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| 3UTR CCA 72 bp | GGCTCAGGCAGAAGCTGCTGTAAGAGCAAGCTCCCCTaGGGCTTCTCACATTTTAGCTTCTCCTTCAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: GSGRSCCKSKLP*GFSHFSFSFSM Trigger: CATGCTGAAGGAGAAGCTAAAATGTGAGAAGCCCCAGGGGAGCTTGCTCTTACAGCAGCTTCTGCCTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| 3UTR TCA 72 bp | GGCTCCTTGTGGAAGCCGGAGGCTATTTCCTTTCTCTaGGCCAGATGCAGATCCTGGACTTCACTAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GSLWKPEAISFL*ARCRSWTSLAR Trigger: TCTAGCTAGTGAAGTCCAGGATCTGCATCTGGCTCAGAGAAAGGAAATAGCCTCCGGCTTCCACAAGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
||
| 3UTR TCA 72 bp | AAGCTTTATACATTCTGGCCTGTCACAGGCCAAGGATaGCACTGGGTGGTAGGTTGTATGGGGAGCCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KLYTFWPVTGQG*HWVVGCMGSPE Trigger: TTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCTGTGACAGGCCAGAATGTATAAAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| 3UTR GCA 72 bp | GGAGTCTGTCTAAGATGCCAGATGACCACTGGTCCCTaGAAGGGCATTTTTGGGAAGTGTGGCTTTTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GVCLRCQMTTGP*KGIFGKCGFLN Trigger: GTTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCATCTTAGACAGACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| 3UTR CCA 72 bp | CGCAGAAGTCTGTGCCATAGCAGTCGATGTTACGGATaGTCTCATAGTCATACTCCAGGGAAGCTGCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: RRSLCHSSRCYG*SHSHTPGKLQS Trigger: AGATTGCAGCTTCCCTGGAGTATGACTATGAGACCATCCGTAACATCGACTGCTATGGCACAGACTTCTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
||
| 3UTR CCA 72 bp | ATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTaGGAAGTGTGGCTTTTTGAACATCTGAAGATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: MPDDHWSLQGHF*EVWLFEHLKIV Trigger: AACAATCTTCAGATGTTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| 3UTR TCA 72 bp | ATGTTAGCAGAGGAAGGTCTGAAAAGGTCAAGATGCTaGGAGAGCCCAAGAGAAGGATACCTTAGCTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: MLAEEGLKRSRC*ESPREGYLSFK Trigger: TTTAAAGCTAAGGTATCCTTCTCTTGGGCTCTCTCAGCATCTTGACCTTTTCAGACCTTCCTCTGCTAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| 3UTR TCA 72 bp | GTCCCTGCAAGGGCATTTTTGGGAAGTGTGGCTTTTTaGACATCTGAAGATTGTTGCAGAGATAATAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VPARAFLGSVAF*TSEDCCRDNRF Trigger: GAACCTATTATCTCTGCAACAATCTTCAGATGTTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| 3UTR CCA 72 bp | CCTCTCCAGGCTCTTAGCCAAACAAGGGATTCTTGCTaGGTAAAGGAAACAAACAAACAAACAAACAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PLQALSQTRDSC*VKETNKQTNKN Trigger: GTTTTTGTTTGTTTGTTTGTTTGTTTCCTTTACCCAGCAAGAATCCCTTGTTTGGCTAAGAGCCTGGAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| 3UTR CCA 72 bp | CACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATaGTCTCTGAAACACTGGTGTGATGATAAAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: HILASPSACVRP*SLKHWCDDKNK Trigger: TTTGTTTTTATCATCACACCAGTGTTTCAGAGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTCGCTTGGCTGCTGGTGGCCTGGGATGGTGTCTTCCTCTTGCTGGGGCTGGAGCAGGGCTGGGCCTaGATGAGGGCCCAGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFAWLLVAWDGVFLLLGLEQGWA*MRAQVP Trigger: GGGAACCTGGGCCCTCATTCAGGCCCAGCCCTGCTC...CAGCCCCAGCAAGAGGAAGACACCATCCCAGGCCACCAGCAGCCAAGCGAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128364.8 |
||
| CDS-3UTR TCA 90 bp | TTCCGGGAAGGGCTGTTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAATGGGAGCAGGGCTGGGCCTaGATGAGGGCCCAGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FREGLFQPIQVGAVAEEWEQGWA*MRAQVP Trigger: GGGAACCTGGGCCCTCATTCAGGCCCAGCCCTGCTC...CCATTCTTCCGCTACCGCACCTACCTGGATTGGCTGGAACAGCCCTTCCCGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206343.2 |
||
| CDS-3UTR TCA 90 bp | AGTCGTAGGCACGCATCTTCAGGAACCAGTGGACCCAGTCCCAGGCTTTCTGGCGCAGGCCCAGCAGGCTaGGGGCTCGGAAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRRHASSGTSGPSPRLSGAGPAG*GLGRRG Trigger: TCCTCTTCTTCCGAGCCCTCAGCCTGCTGGGCCTGC...GCCAGAAAGCCTGGGACTGGGTCCACTGGTTCCTGAAGATGCGTGCCTACGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128364.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCAAGGATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCAGCAGGCCCAGCAGGCTaGGGGCTCGGAAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPRMTLGGRLYGEPRNGSAGPAG*GLGRRG Trigger: TCCTCTTCTTCCGAGCCCTCAGCCTGCTGGGCCTGC...TGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR TCA 90 bp | CAATGCAGCAGAGCTCACTCTTCCCGGAGCTTTTCCTTCGCTTGGCTGCTGGTGGCTGGACAGCATTGGTaGAGGGCGTGGGAGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QCSRAHSSRSFSFAWLLVAGQHW*RAWEWA Trigger: TGCCCACTCCCACGCCCTTCACCAATGCTGTCCAGC...CACCAGCAGCCAAGCGAAGGAAAAGCTCCGGGAAGAGTGAGCTCTGCTGCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128364.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCAAGGATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCACGAAGCCCGCGGCAATaGAACCGCACTCGGCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPRMTLGGRLYGEPRNGSRSPRQ*NRTRPQ Trigger: TTGCGGCCGAGTGCGGTTGCATTGCCGCGGGCTTCG...TGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR CCA 90 bp | TCCTTCGCTTGGCTGCTGGTGGCCTGGGATGGTGTCTTCCTCTTGCTGGGGCTGAGCGTAGGCTCCTTGTaGAAGCCGGAGGCTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFAWLLVAWDGVFLLLGLSVGSL*KPEAIS Trigger: GGAAATAGCCTCCGGCTTCCACAAGGAGCCTACGCT...CAGCCCCAGCAAGAGGAAGACACCATCCCAGGCCACCAGCAGCCAAGCGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128364.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCAAGGATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCATGTAGAAGAGGCGGGTaGGCAGCGGGCGGGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPRMTLGGRLYGEPRNGSCRRGG*AAGGRR Trigger: TCTACGCCCGCCCGCTGCCCACCCGCCTCTTCTACA...TGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGTAGGTGCGGTAGCGGAAGAATGGGCCTGTCATGATTCCCACGTAACACAACAGGGCTGGGCCTaGATGAGGGCCCAGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IQVGAVAEEWACHDSHVTQQGWA*MRAQVP Trigger: GGGAACCTGGGCCCTCATTCAGGCCCAGCCCTGTTG...TGTTACGTGGGAATCATGACAGGCCCATTCTTCCGCTACCGCACCTACCTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127106.8 |
||
| CDS-3UTR CCA 90 bp | CACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTGGCTTTTTGAACATCTGAAGGCCAAAGAGCGGGGCTaGCCAGGCGCGGCGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HWSLQGHFWEVWLFEHLKAKERG*PGAAQQ Trigger: CTGCTGCGCCGCGCCTGGCCAGCCCCGCTCTTTGGC...CTTCAGATGTTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR TCA 90 bp | AGGCTCCTTGTGGAAGCCGGAGGCTATTTCCTTTCTCTGAGCCAGATGCAGATCGCTGGACAGCATTGGTaGAGGGCGTGGGAGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLVEAGGYFLSLSQMQIAGQHW*RAWEWA Trigger: TGCCCACTCCCACGCCCTTCACCAATGCTGTCCAGC...GATCTGCATCTGGCTCAGAGAAAGGAAATAGCCTCCGGCTTCCACAAGGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206343.2 |
||
| CDS-3UTR GCA 90 bp | GACCTCAGGCAGGAGGCCCAGCGTAGGCTCCTTGTGGAAGCCGGAGGCTATTTCATGGTGATCAGAGAATaGAAACTGTGGGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DLRQEAQRRLLVEAGGYFMVIRE*KLWGPQ Trigger: CTGTGGCCCCCACAGTTTGCATTCTCTGATCACCAT...GAAATAGCCTCCGGCTTCCACAAGGAGCCTACGCTGGGCCTCCTGCCTGAGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127106.8 ENSMUST00000206343.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCAAGGATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCACCTTCGCTTGGCTGCTaGTGGCCTGGGATGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPRMTLGGRLYGEPRNGSPSLGC*WPGMVS Trigger: AGACACCATCCCAGGCCACCAGCAGCCAAGCGAAGG...TGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| 3UTR CAA 72 bp | GCCTGTCACAGGCCAAGGATGACACTGGGTGGTAGGTaGTATGGGGAGCCCAGAAATGGCTCAGGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACHRPRMTLGGR*YGEPRNGSGRS Trigger: GCTTCTGCCTGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCTGTGACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| CDS-3UTR TCA 90 bp | CACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTGGCTTTTTGAACATCTGAAGGAGCAGGGCTGGGCCTaGATGAGGGCCCAGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HWSLQGHFWEVWLFEHLKEQGWA*MRAQVP Trigger: GGGAACCTGGGCCCTCATTCAGGCCCAGCCCTGCTC...CTTCAGATGTTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR CCA 90 bp | AGGCCAAGGATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCAGGACCCAGAAGTAGATaGAGGCCCAGTACCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPRMTLGGRLYGEPRNGSGPRSR*RPSTGV Trigger: CACTCCGGTACTGGGCCTCCATCTACTTCTGGGTCC...TGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR CCA 90 bp | TGCACATGTAGTCGTAGGCACGCATCTTCAGGAACCAGTGGACCCAGTCCCAGGAGTGTCAACAGCAGCTaGACAGCATTGGTGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTCSRRHASSGTSGPSPRSVNSS*TALVKG Trigger: GCCCTTCACCAATGCTGTCCAGCTGCTGTTGACACT...CCTGGGACTGGGTCCACTGGTTCCTGAAGATGCGTGCCTACGACTACATGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128364.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCAAGGATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCAGCGGTAGCGGAAGAATaGGCCTGTCATGATTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPRMTLGGRLYGEPRNGSAVAEE*ACHDSH Trigger: GTGGGAATCATGACAGGCCCATTCTTCCGCTACCGC...TGAGCCATTTCTGGGCTCCCCATACAACCTACCACCCAGTGTCATCCTTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR CCA 90 bp | TCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTCTGAAACACCCCCGGCCCGGGCTTTaGCAGCCACAGGGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHILASPSACVRPWSLKHPRPGL*QPQGRP Trigger: GGGCCTACCCTGTGGCTGCCAAAGCCCGGGCCGGGG...GTGTTTCAGAGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGGAAGGTCTGAAAAGGTCAAGATGCTGAGAGAGCCCAAGAGAAGGATACAGTCCCAGGCTTTCTaGCCCCCGGGGCTCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRGRSEKVKMLREPKRRIQSQAF*PPGLRC Trigger: ACACCTGAGCCCCGGGGGCCAGAAAGCCTGGGACTG...TATCCTTCTCTTGGGCTCTCTCAGCATCTTGACCTTTTCAGACCTTCCTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR CCA 90 bp | CAATGCAGCAGAGCTCACTCTTCCCGGAGCTTTTCCTTCGCTTGGCTGCTGGTGGCCAGATGCAGATCCTaGACTTCACTAGCTAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: QCSRAHSSRSFSFAWLLVARCRS*TSLARL Trigger: GAGTCTAGCTAGTGAAGTCCAGGATCTGCATCTGGC...CACCAGCAGCCAAGCGAAGGAAAAGCTCCGGGAAGAGTGAGCTCTGCTGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128364.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAGATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTGGTGGCTGCTGGTGGCCTaGGATGGTGTCTTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKMPDDHWSLQGHFWEVWWLLVA*DGVFLL Trigger: CAAGAGGAAGACACCATCCCAGGCCACCAGCAGCCA...CCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCATCTTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR CCA 90 bp | TGTCTAAGATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTTCGCTTGGCTGCTGGTaGCCTGGGATGGTGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLRCQMTTGPCKGIFGKCSLGCW*PGMVSS Trigger: GGAAGACACCATCCCAGGCCACCAGCAGCCAAGCGA...ACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCATCTTAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR GCA 90 bp | ATGGCTCAGGCAGAAGCTGCTGTAAGAGCAAGCTCCCCTGGGGCTTCTCACATTATGGTGATCAGAGAATaGAAACTGTGGGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MAQAEAAVRASSPGASHIMVIRE*KLWGPQ Trigger: CTGTGGCCCCCACAGTTTGCATTCTCTGATCACCAT...AATGTGAGAAGCCCCAGGGGAGCTTGCTCTTACAGCAGCTTCTGCCTGAGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038608.14 ENSMUST00000127106.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAATGGGCCTGTCATGATATGGTGATCAGAGAATaGAAACTGTGGGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LFQPIQVGAVAEEWACHDMVIRE*KLWGPQ Trigger: CTGTGGCCCCCACAGTTTGCATTCTCTGATCACCAT...ATCATGACAGGCCCATTCTTCCGCTACCGCACCTACCTGGATTGGCTGGAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127106.8 ENSMUST00000206343.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTAAGATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTGCCAATCCAGGTAGGTaGGGTAGCGGAAGAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLRCQMTTGPCKGIFGKCANPGR*GSGRMG Trigger: GCCCATTCTTCCGCTACCGCACCTACCTGGATTGGC...ACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCATCTTAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR CCA 90 bp | TGTCTAAGATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTGTGTCTTCCTCTTGCTaGGGCTGCCCCCACCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLRCQMTTGPCKGIFGKCVSSSC*GCPHPK Trigger: TTTTGGGTGGGGGCAGCCCCAGCAAGAGGAAGACAC...ACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCATCTTAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR CCA 90 bp | TCTAAGATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTGGAGCTTTTCCTTCGCTTaGCTGCTGGTGGCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKMPDDHWSLQGHFWEVWSFSFA*LLVAWD Trigger: ATCCCAGGCCACCAGCAGCCAAGCGAAGGAAAAGCT...CCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCATCTTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTCTGAAACACGGACTGCTAGGGGGTaGGCATTGGAGGGTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSHFSFSFSMCKTMVSETRTARG*ALEGGA Trigger: GGCCCCACCCTCCAATGCCCACCCCCTAGCAGTCCG...TGTTTCAGAGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR TCA 90 bp | GGAAAGGAGCACAAAGCCCATGCACATGTAGTCGTAGGCACGCATCTTCAGGAAGCTATTTCCTTTCTCTaGGCCAGATGCAGATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKEHKAHAHVVVGTHLQEAISFL*ARCRSW Trigger: CCAGGATCTGCATCTGGCTCAGAGAAAGGAAATAGC...TTCCTGAAGATGCGTGCCTACGACTACATGTGCATGGGCTTTGTGCTCCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128364.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGGAAGGTCTGAAAAGGTCAAGATGCTGAGAGAGCCCAAGAGAAGGATAAGCGTAGGCTCCTTGTaGAAGCCGGAGGCTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRGRSEKVKMLREPKRRISVGSL*KPEAIS Trigger: GGAAATAGCCTCCGGCTTCCACAAGGAGCCTACGCT...TATCCTTCTCTTGGGCTCTCTCAGCATCTTGACCTTTTCAGACCTTCCTCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCATGCACATGTAGTCGTAGGCACGCATCTTCAGGAACCAGTGGACCCAAACAGTAGCTATAGCTaGGTGTCTCCATCAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAHAHVVVGTHLQEPVDPNSSYS*VSPSKR Trigger: CCTCTTTGATGGAGACACTCAGCTATAGCTACTGTT...TGGGTCCACTGGTTCCTGAAGATGCGTGCCTACGACTACATGTGCATGGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128364.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTGTCATGATTCCCACGTAACAGTAGCTATAGCTGAGTGTCTCCATCAAAGTGTCAACAGCAGCTaGACAGCATTGGTGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WACHDSHVTVAIAECLHQSVNSS*TALVKG Trigger: GCCCTTCACCAATGCTGTCCAGCTGCTGTTGACACT...TTGATGGAGACACTCAGCTATAGCTACTGTTACGTGGGAATCATGACAGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206343.2 |
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| CDS-3UTR CCA 90 bp | TGTCTAAGATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTGCCAGATGCAGATCCTaGACTTCACTAGCTAGACTC | + |
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Preference number: 4 (lower is better) Translates to: CLRCQMTTGPCKGIFGKCARCRS*TSLARL Trigger: GAGTCTAGCTAGTGAAGTCCAGGATCTGCATCTGGC...ACACTTCCCAAAAATGCCCTTGCAGGGACCAGTGGTCATCTGGCATCTTAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR TCA 90 bp | CATCTGAAGATTGTTGCAGAGATAATAGGTTCAAGAGTGGATAGTAATACCCTGGCTGGACAGCATTGGTaGAGGGCGTGGGAGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HLKIVAEIIGSRVDSNTLAGQHW*RAWEWA Trigger: TGCCCACTCCCACGCCCTTCACCAATGCTGTCCAGC...CAGGGTATTACTATCCACTCTTGAACCTATTATCTCTGCAACAATCTTCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR GCA 90 bp | CACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTGGCTTTTTGAACATCTGAAGGCACGCAGAAGTCTGTaGCATAGCAGTCGATGTTAC | + |
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Preference number: 4 (lower is better) Translates to: HWSLQGHFWEVWLFEHLKARRSL*HSSRCY Trigger: GTAACATCGACTGCTATGGCACAGACTTCTGCGTGC...CTTCAGATGTTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR GCA 90 bp | TCAGCATGTGTAAGACCATGGTCTCTGAAACACTGGTGTGATGATAAAAACAAAATGGTGTCTTCCTCTTaGTGGGGCTGCCCCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SACVRPWSLKHWCDDKNKMVSSS*WGCPHP Trigger: TGGGTGGGGGCAGCCCCAGCAAGAGGAAGACACCAT...TTTGTTTTTATCATCACACCAGTGTTTCAGAGACCATGGTCTTACACATGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR GCA 90 bp | TTCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTCTGAAACATTTCCTTCGCTTGGCTaGTGGTGGCCTGGGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSHFSFSFSMCKTMVSETFPSLG*WWPGMV Trigger: CACCATCCCAGGCCACCAGCAGCCAAGCGAAGGAAA...TGTTTCAGAGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR TCA 90 bp | CACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTGGCTTTTTGAACATCTGAAGAACAGTAGCTATAGCTaGGTGTCTCCATCAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: HWSLQGHFWEVWLFEHLKNSSYS*VSPSKR Trigger: CCTCTTTGATGGAGACACTCAGCTATAGCTACTGTT...CTTCAGATGTTCAAAAAGCCACACTTCCCAAAAATGCCCTTGCAGGGACCAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR CCA 90 bp | ACCTTAGCTTTAAATAGAAGGCAGAGGAATTATTTGGGAAGAGGGGATCCTCTCAGTGTCAACAGCAGCTaGACAGCATTGGTGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TLALNRRQRNYLGRGDPLSVNSS*TALVKG Trigger: GCCCTTCACCAATGCTGTCCAGCTGCTGTTGACACT...GAGAGGATCCCCTCTTCCCAAATAATTCCTCTGCCTTCTATTTAAAGCTAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR TCA 90 bp | TCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTCTGAAACACACAGCGGGATGGTCATaGAGCTTAGGTAGTAACCAG | + |
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Preference number: 4 (lower is better) Translates to: SHILASPSACVRPWSLKHTAGWS*SLGSNQ Trigger: CTGGTTACTACCTAAGCTTCATGACCATCCCGCTGT...GTGTTTCAGAGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR GCA 90 bp | CATCTGAAGATTGTTGCAGAGATAATAGGTTCAAGAGTGGATAGTAATACCCTGCAACGTAGAAGCGCATaGGGAAGGCGAAGAAGACCG | + |
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Preference number: 4 (lower is better) Translates to: HLKIVAEIIGSRVDSNTLQRRSA*GRRRRP Trigger: CGGTCTTCTTCGCCTTCCGCATGCGCTTCTACGTTG...CAGGGTATTACTATCCACTCTTGAACCTATTATCTCTGCAACAATCTTCAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR GCA 90 bp | TCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTCTGAAACACGTAGGAGCGGAAAGGTaGGCTCTTGTAGATGTACTG | + |
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Preference number: 4 (lower is better) Translates to: SHILASPSACVRPWSLKHVGAER*ALVDVL Trigger: CAGTACATCTACAAGAGCGCACCTTTCCGCTCCTAC...GTGTTTCAGAGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR CCA 90 bp | CATCTGAAGATTGTTGCAGAGATAATAGGTTCAAGAGTGGATAGTAATACCCTGACGCACAGCTTCCAGTaGGAAGAGATGGGAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: HLKIVAEIIGSRVDSNTLTHSFQ*EEMGGQ Trigger: CTGTCCTCCCATCTCTTCCCACTGGAAGCTGTGCGT...CAGGGTATTACTATCCACTCTTGAACCTATTATCTCTGCAACAATCTTCAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR GCA 90 bp | TCAGCATGTGTAAGACCATGGTCTCTGAAACACTGGTGTGATGATAAAAACAAATGTGCCAGCCACCACTaGACGGTCATGTTCCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: SACVRPWSLKHWCDDKNKCASHH*TVMFQY Trigger: ATACTGGAACATGACCGTGCAGTGGTGGCTGGCACA...TTTGTTTTTATCATCACACCAGTGTTTCAGAGACCATGGTCTTACACATGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR TCA 90 bp | TCAGCATGTGTAAGACCATGGTCTCTGAAACACTGGTGTGATGATAAAAACAAAGCTATTTCCTTTCTCTaGGCCAGATGCAGATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SACVRPWSLKHWCDDKNKAISFL*ARCRSW Trigger: CCAGGATCTGCATCTGGCTCAGAGAAAGGAAATAGC...TTTGTTTTTATCATCACACCAGTGTTTCAGAGACCATGGTCTTACACATGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR CCA 90 bp | TTCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTCTGAAACAAGTCGATGTTACGGATaGTCTCATAGTCATACTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSHFSFSFSMCKTMVSETSRCYG*SHSHTP Trigger: TGGAGTATGACTATGAGACCATCCGTAACATCGACT...TGTTTCAGAGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR CAA 90 bp | CGGCTTCCGGGAAGGGCTGTTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAAGCAGCTGGACAGCATaGGTGAAGGGCGTGGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: RLPGRAVPANPGRCGSGRSSWTA*VKGVGV Trigger: CACTCCCACGCCCTTCACCAATGCTGTCCAGCTGCT...TCTTCCGCTACCGCACCTACCTGGATTGGCTGGAACAGCCCTTCCCGGAAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206343.2 |
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| CDS-3UTR CAA 90 bp | CCTGGGGCTTCTCACATTTTAGCTTCTCCTTCAGCATGTGTAAGACCATGGTCTGCTAGGGGGTGGGCATaGGAGGGTGGGGCCGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: PGASHILASPSACVRPWSARGWA*EGGAAP Trigger: GGGGGCGGCCCCACCCTCCAATGCCCACCCCCTAGC...AGACCATGGTCTTACACATGCTGAAGGAGAAGCTAAAATGTGAGAAGCCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS CCA 90 bp | ATGAGGGCCCAGGTTCCCAAGATGGTGATCAGAGAATGCAAACTGTaGGGGCCACAGGTGAATAAGGTGAGCCCCAGGCCCACAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: MRAQVPKMVIRECKL*GPQVNKVSPRPTAA Trigger: AGCAGCTGTGGGCCTGGGGCTCACCTTATTCACCTGTGGCCCCCACAGTTTGCATTCTCTGATCACCATCTTGGGAACCTGGGCCCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000038608.14 ENSMUST00000118710.3 ENSMUST00000127106.8 ENSMUST00000206343.2 ENSMUST00000206379.2 |
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| CDS-3UTR CAA 90 bp | ATGGCTCAGGCAGAAGCTGCTGTAAGAGCAAGCTCCCCTGGGGCTTCTCACATTAGCAGCTGGACAGCATaGGTGAAGGGCGTGGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: MAQAEAAVRASSPGASHISSWTA*VKGVGV Trigger: CACTCCCACGCCCTTCACCAATGCTGTCCAGCTGCT...AATGTGAGAAGCCCCAGGGGAGCTTGCTCTTACAGCAGCTTCTGCCTGAGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038608.14 |
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| CDS-3UTR CAA 90 bp | AAGCTTGAACTGGAAGGCAGGCCAATGCAGCAGAGCTCACTCTTCCCGGAGCTTAGCAGCTGGACAGCATaGGTGAAGGGCGTGGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: KLELEGRPMQQSSLFPELSSWTA*VKGVGV Trigger: CACTCCCACGCCCTTCACCAATGCTGTCCAGCTGCT...AAGCTCCGGGAAGAGTGAGCTCTGCTGCATTGGCCTGCCTTCCAGTTCAAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128364.8 |
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| CDS TCA 90 bp | CCCAGCGTAGGCTCCTTGTGGAAGCCGGAGGCTATTTCCTTTCTCTaGGCCAGATGCAGATCCTGGACTTCACTAGCTAGACTCACCAAC | + |
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Preference number: 5 (lower is better) Translates to: PSVGSLWKPEAISFL*ARCRSWTSLARLTN Trigger: GTTGGTGAGTCTAGCTAGTGAAGTCCAGGATCTGCATCTGGCTCAGAGAAAGGAAATAGCCTCCGGCTTCCACAAGGAGCCTACGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038608.14 ENSMUST00000118710.3 ENSMUST00000128364.8 |
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