Pregenerated sensors for MBOAT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071113Ensembl transcript IDs: ENSMUST00000095345.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGCCATTACTATTCAAACCACCACAGAAGAGAAACACATCTCTGTaGCCAGCCATCAGGTTTATCCATCCAATACTTAAAAACTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: EPLLFKPPQKRNTSL*PAIRFIHPILKNFH Trigger: GTGAAAGTTTTTAAGTATTGGATGGATAAACCTGATGGCTGGCCACAGAGATGTGTTTCTCTTCTGTGGTGGTTTGAATAGTAATGGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAGGAGCTAAGAGTTCTATATCCAGATCGGCAAGCTACAGGGAAAGACGCCATCAAGGCATCTTCTaGCATTTCCTAAGCAGTATT | + |
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Preference number: 2 (lower is better) Translates to: AGGAKSSISRSASYRERRHQGIF*HFLSSI Trigger: AATACTGCTTAGGAAATGCCAGAAGATGCCTTGATG...GCGTCTTTCCCTGTAGCTTGCCGATCTGGATATAGAACTCTTAGCTCCTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGACTTATAATTCCAGGGGTTTAGTCCATTATCATCATGGCAGGAAGCATTATTTAATGGCTAGGTaGGATGAAGGGCAGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GLTYNSRGLVHYHHGRKHYLMAR*DEGQGK Trigger: CTTTCCCTGCCCTTCATCTCACCTAGCCATTAAATA...ATGCTTCCTGCCATGATGATAATGGACTAAACCCCTGGAATTATAAGTCAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGACTTATAATTCCAGGGGTTTAGTCCATTATCATCATGGCAGGAAGCATAGAAACACATCTCTGTaGCCAGCCATCAGGTTTATC | + |
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Preference number: 2 (lower is better) Translates to: GLTYNSRGLVHYHHGRKHRNTSL*PAIRFI Trigger: GATAAACCTGATGGCTGGCCACAGAGATGTGTTTCT...ATGCTTCCTGCCATGATGATAATGGACTAAACCCCTGGAATTATAAGTCAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR CCA 90 bp | GGGAGCCATTACTATTCAAACCACCACAGAAGAGAAACACATCTCTGTGGCCAGCCAAAGCCCGCCGCGTaGAGGAGAGAGTCGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GSHYYSNHHRRETHLCGQPKPAA*RRESSR Trigger: CCTGGACGACTCTCTCCTCCACGCGGCGGGCTTTGG...CTGGCCACAGAGATGTGTTTCTCTTCTGTGGTGGTTTGAATAGTAATGGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR TCA 90 bp | GGGAGCCATTACTATTCAAACCACCACAGAAGAGAAACACATCTCTGTGGCCAGAAGAACTCTTGCTCCTaGTGCCCCGCCTCGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GSHYYSNHHRRETHLCGQKNSCS*CPASGP Trigger: AGGCCCCGAGGCGGGGCATCAGGAGCAAGAGTTCTT...CTGGCCACAGAGATGTGTTTCTCTTCTGTGGTGGTTTGAATAGTAATGGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR GCA 90 bp | GCTGGAGGAGCTAAGAGTTCTATATCCAGATCGGCAAGCTACAGGGAAAGACGCTCCAGCCCGAGAATCTaGAGACCCCTCCAGGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: AGGAKSSISRSASYRERRSSPRI*RPLQVR Trigger: TCTGACCTGGAGGGGTCTGCAGATTCTCGGGCTGGA...GCGTCTTTCCCTGTAGCTTGCCGATCTGGATATAGAACTCTTAGCTCCTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR CCA 90 bp | GCTGGAGGAGCTAAGAGTTCTATATCCAGATCGGCAAGCTACAGGGAAAGACGCGAGAGTAGGGACCCATaGCAGCAAAAGCCAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: AGGAKSSISRSASYRERRESRDP*QQKPGH Trigger: GTGTCCTGGCTTTTGCTGCCATGGGTCCCTACTCTC...GCGTCTTTCCCTGTAGCTTGCCGATCTGGATATAGAACTCTTAGCTCCTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGACTTATAATTCCAGGGGTTTAGTCCATTATCATCATGGCAGGAAGCATTCCTCTCCAGGCCCCTaGCCAGCCTCAGCGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GLTYNSRGLVHYHHGRKHSSPGP*PASAPK Trigger: CTTTGGCGCTGAGGCTGGCCAGGGGCCTGGAGAGGA...ATGCTTCCTGCCATGATGATAATGGACTAAACCCCTGGAATTATAAGTCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR CCA 90 bp | GGCATGCAGGCAGACATGGTGCTGGAGGAGCTAAGAGTTCTATATCCAGATCGGAACAGGGAGATCCTGTaGGTAGTTTCCAGGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GMQADMVLEELRVLYPDRNREIL*VVSRVQ Trigger: TTGGACCCTGGAAACTACCCACAGGATCTCCCTGTT...CCGATCTGGATATAGAACTCTTAGCTCCTCCAGCACCATGTCTGCCTGCATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR TCA 90 bp | GGGCTGACTTATAATTCCAGGGGTTTAGTCCATTATCATCATGGCAGGAAGCATGGAAGACGAGCCTCCTaGGCCACAGAGCTGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GLTYNSRGLVHYHHGRKHGRRAS*ATELCF Trigger: GAAGCACAGCTCTGTGGCTCAGGAGGCTCGTCTTCC...ATGCTTCCTGCCATGATGATAATGGACTAAACCCCTGGAATTATAAGTCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR TCA 90 bp | AAGAGAAACACATCTCTGTGGCCAGCCATCAGGTTTATCCATCCAATACTTAAAAGGAAGCCGAACACCTaGCCTGGGTGGAGCCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: KRNTSLWPAIRFIHPILKRKPNT*PGWSPC Trigger: GCACGGGCTCCACCCAGGTCAGGTGTTCGGCTTCCT...TTTAAGTATTGGATGGATAAACCTGATGGCTGGCCACAGAGATGTGTTTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR TCA 90 bp | ATGGTGCTGGAGGAGCTAAGAGTTCTATATCCAGATCGGCAAGCTACAGGGAAAGGGTATGAGCCCAAGTaGGGGCTCTATAAAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: MVLEELRVLYPDRQATGKGYEPK*GLYKAA Trigger: GGCTGCTTTATAGAGCCCTCACTTGGGCTCATACCC...TTTCCCTGTAGCTTGCCGATCTGGATATAGAACTCTTAGCTCCTCCAGCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR GCA 90 bp | AAGAGAAACACATCTCTGTGGCCAGCCATCAGGTTTATCCATCCAATACTTAAACCTGGGTGGAGCCCGTaGCACCAGGCAGAGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: KRNTSLWPAIRFIHPILKPGWSP*HQAEKA Trigger: TGCCTTCTCTGCCTGGTGGCACGGGCTCCACCCAGG...TTTAAGTATTGGATGGATAAACCTGATGGCTGGCCACAGAGATGTGTTTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR CCA 90 bp | GGGAGCCATTACTATTCAAACCACCACAGAAGAGAAACACATCTCTGTGGCCAGGTAGAACCTCACGGGTaGAGGCTCACCCAGGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: GSHYYSNHHRRETHLCGQVEPHG*RLTQVV Trigger: TACTACCTGGGTGAGCCTCCACCCGTGAGGTTCTAC...CTGGCCACAGAGATGTGTTTCTCTTCTGTGGTGGTTTGAATAGTAATGGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR TCA 90 bp | GGGCTGACTTATAATTCCAGGGGTTTAGTCCATTATCATCATGGCAGGAAGCATGGACTTCCTGTGGACTaGGGAAGGAGACCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GLTYNSRGLVHYHHGRKHGLPVD*GRRPEP Trigger: TGGCTCTGGTCTCCTTCCTCAGTCCACAGGAAGTCC...ATGCTTCCTGCCATGATGATAATGGACTAAACCCCTGGAATTATAAGTCAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR GCA 90 bp | ATTCAAACCACCACAGAAGAGAAACACATCTCTGTGGCCAGCCATCAGGTTTATGTGCTTCGGTTCCACTaGCTGGCGAACAGGGAGATC | + |
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Preference number: 4 (lower is better) Translates to: IQTTTEEKHISVASHQVYVLRFH*LANREI Trigger: GATCTCCCTGTTCGCCAGGCAGTGGAACCGAAGCAC...ATAAACCTGATGGCTGGCCACAGAGATGTGTTTCTCTTCTGTGGTGGTTTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR TCA 90 bp | GCCATTACTATTCAAACCACCACAGAAGAGAAACACATCTCTGTGGCCAGCCATGTCTGCCAGCCCATCTaGAAGAAGAAGGTCAGCCTA | + |
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Preference number: 4 (lower is better) Translates to: AITIQTTTEEKHISVASHVCQPI*KKKVSL Trigger: TAGGCTGACCTTCTTCTTTCAGATGGGCTGGCAGAC...ATGGCTGGCCACAGAGATGTGTTTCTCTTCTGTGGTGGTTTGAATAGTAATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR TCA 90 bp | GCTGGAGGAGCTAAGAGTTCTATATCCAGATCGGCAAGCTACAGGGAAAGACGCAAAAGAGCAAGTAGCTaGAATGAGGTAGAGCATCCC | + |
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Preference number: 4 (lower is better) Translates to: AGGAKSSISRSASYRERRKRASS*NEVEHP Trigger: GGGATGCTCTACCTCATTTCAGCTACTTGCTCTTTT...GCGTCTTTCCCTGTAGCTTGCCGATCTGGATATAGAACTCTTAGCTCCTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR CCA 90 bp | ATTCAAACCACCACAGAAGAGAAACACATCTCTGTGGCCAGCCATCAGGTTTATGGAGAAAGAGGTACCTaGCCCGGGTGGAAAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: IQTTTEEKHISVASHQVYGERGT*PGWKRC Trigger: ACACCTTTTCCACCCGGGCCAGGTACCTCTTTCTCC...ATAAACCTGATGGCTGGCCACAGAGATGTGTTTCTCTTCTGTGGTGGTTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR TCA 90 bp | ATGGTGCTGGAGGAGCTAAGAGTTCTATATCCAGATCGGCAAGCTACAGGGAAATTCACAAATGTCCAGTaGGAGGGATGTGACTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: MVLEELRVLYPDRQATGKFTNVQ*EGCDSL Trigger: CAGAGAGTCACATCCCTCTCACTGGACATTTGTGAA...TTTCCCTGTAGCTTGCCGATCTGGATATAGAACTCTTAGCTCCTCCAGCACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGACTTATAATTCCAGGGGTTTAGTCCATTATCATCATGGCAGGAAGCATCCTATGGACTTCCTGTaGACTGAGGAAGGAGACCAG | + |
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Preference number: 4 (lower is better) Translates to: GLTYNSRGLVHYHHGRKHPMDFL*TEEGDQ Trigger: CTGGTCTCCTTCCTCAGTCCACAGGAAGTCCATAGG...ATGCTTCCTGCCATGATGATAATGGACTAAACCCCTGGAATTATAAGTCAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR TCA 90 bp | AAGAGAAACACATCTCTGTGGCCAGCCATCAGGTTTATCCATCCAATACTTAAACCAGTGAGAGGGATGTaGCTCTCTGCGTCAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: KRNTSLWPAIRFIHPILKPVRGM*LSASRA Trigger: TGCTCTTGACGCAGAGAGTCACATCCCTCTCACTGG...TTTAAGTATTGGATGGATAAACCTGATGGCTGGCCACAGAGATGTGTTTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR TCA 90 bp | GCCATTACTATTCAAACCACCACAGAAGAGAAACACATCTCTGTGGCCAGCCATCGGATACAAAGAGCTTaGTCTTTGAACGCAAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: AITIQTTTEEKHISVASHRIQRA*SLNASL Trigger: CAGGCTTGCGTTCAAAGATCAAGCTCTTTGTATCCG...ATGGCTGGCCACAGAGATGTGTTTCTCTTCTGTGGTGGTTTGAATAGTAATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR GCA 90 bp | AACACATCTCTGTGGCCAGCCATCAGGTTTATCCATCCAATACTTAAAAACTTTAGGGATGTGACTCTCTaGGTCAAGAGCATGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: NTSLWPAIRFIHPILKNFRDVTL*VKSMRE Trigger: TTCCCTCATGCTCTTGACGCAGAGAGTCACATCCCT...AAAGTTTTTAAGTATTGGATGGATAAACCTGATGGCTGGCCACAGAGATGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR GCA 90 bp | AACACATCTCTGTGGCCAGCCATCAGGTTTATCCATCCAATACTTAAAAACTTTAGAGCATCCCACAGGTaGTCAGAGAAAGAACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: NTSLWPAIRFIHPILKNFRASHR*SEKELL Trigger: CAAGAGTTCTTTCTCTGAGCACCTGTGGGATGCTCT...AAAGTTTTTAAGTATTGGATGGATAAACCTGATGGCTGGCCACAGAGATGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS TCA 90 bp | TCTGCAGCAGGGGCCAGCGCCGGCTCTTCCGGAAGACGAGCCTCCTaGGCCACAGAGCTGTGCTTCGGTTCCACTGCCTGGCGAACAGGG | + |
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Preference number: 5 (lower is better) Translates to: SAAGASAGSSGRRAS*ATELCFGSTAWRTG Trigger: CCCTGTTCGCCAGGCAGTGGAACCGAAGCACAGCTCTGTGGCTCAGGAGGCTCGTCTTCCGGAAGAGCCGGCGCTGGCCCCTGCTGCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS TCA 90 bp | CATCCAGTCCAGCTCCAGCACTCACCGCGCTCCTCAGCGCCACCTTaGGGCACTCCAGCCCGAGAATCTGCAGACCCCTCCAGGTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: HPVQLQHSPRSSAPP*GTPARESADPSRSE Trigger: CTCTGACCTGGAGGGGTCTGCAGATTCTCGGGCTGGAGTGCCTCAAGGTGGCGCTGAGGAGCGCGGTGAGTGCTGGAGCTGGACTGGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS GCA 90 bp | ACCGCGCTCCTCAGCGCCACCTTGAGGCACTCCAGCCCGAGAATCTaGAGACCCCTCCAGGTCAGAGCCCGAAAAGAGATACTCGGATAC | + |
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Preference number: 5 (lower is better) Translates to: TALLSATLRHSSPRI*RPLQVRARKEILGY Trigger: GTATCCGAGTATCTCTTTTCGGGCTCTGACCTGGAGGGGTCTGCAGATTCTCGGGCTGGAGTGCCTCAAGGTGGCGCTGAGGAGCGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS CCA 90 bp | AGAGCTGTGCTTCGGTTCCACTGCCTGGCGAACAGGGAGATCCTGTaGGTAGTTTCCAGGGTCCAAATGTCCACGTCGGGGACGTATCCC | + |
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Preference number: 5 (lower is better) Translates to: RAVLRFHCLANREIL*VVSRVQMSTSGTYP Trigger: GGGATACGTCCCCGACGTGGACATTTGGACCCTGGAAACTACCCACAGGATCTCCCTGTTCGCCAGGCAGTGGAACCGAAGCACAGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS TCA 90 bp | GATGCCCCGCCTCGGGGCCTCCACCTTCCCTTCACAAATGTCCAGTaGGAGGGATGTGACTCTCTGCGTCAAGAGCATGAGGGAAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: DAPPRGLHLPFTNVQ*EGCDSLRQEHEGRK Trigger: CTTTCTTCCCTCATGCTCTTGACGCAGAGAGTCACATCCCTCTCACTGGACATTTGTGAAGGGAAGGTGGAGGCCCCGAGGCGGGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS CCA 90 bp | CTGCCAGCCCATCTGAAAGAAGAAGGTCAGCCTATGGACTTCCTGTaGACTGAGGAAGGAGACCAGAGCCACAGCGCAGAGCGCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LPAHLKEEGQPMDFL*TEEGDQSHSAERRD Trigger: ATCCCTGCGCTCTGCGCTGTGGCTCTGGTCTCCTTCCTCAGTCCACAGGAAGTCCATAGGCTGACCTTCTTCTTTCAGATGGGCTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS-3UTR CAA 90 bp | GGGAGCCATTACTATTCAAACCACCACAGAAGAGAAACACATCTCTGTGGCCAGTCAGAGAAAGAACTCTaGCTCCTGATGCCCCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GSHYYSNHHRRETHLCGQSEKEL*LLMPRL Trigger: GAGGCGGGGCATCAGGAGCAAGAGTTCTTTCTCTGA...CTGGCCACAGAGATGTGTTTCTCTTCTGTGGTGGTTTGAATAGTAATGGCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS TCA 72 bp | GGGGCCAGCGCCGGCTCTTCCGGAAGACGAGCCTCCTaGGCCACAGAGCTGTGCTTCGGTTCCACTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GASAGSSGRRAS*ATELCFGSTAW Trigger: CCAGGCAGTGGAACCGAAGCACAGCTCTGTGGCTCAGGAGGCTCGTCTTCCGGAAGAGCCGGCGCTGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS TCA 72 bp | CAGCTCCAGCACTCACCGCGCTCCTCAGCGCCACCTTaGGGCACTCCAGCCCGAGAATCTGCAGACCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QLQHSPRSSAPP*GTPARESADPS Trigger: GGAGGGGTCTGCAGATTCTCGGGCTGGAGTGCCTCAAGGTGGCGCTGAGGAGCGCGGTGAGTGCTGGAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS GCA 72 bp | TGGAGCCCGTGCCACCAGGCAGAGAAGGCAAATGTCTaGAGCAGGGGCCAGCGCCGGCTCTTCCGGAAGACG | + |
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Preference number: 6 (lower is better) Translates to: WSPCHQAEKANV*SRGQRRLFRKT Trigger: CGTCTTCCGGAAGAGCCGGCGCTGGCCCCTGCTGCAGACATTTGCCTTCTCTGCCTGGTGGCACGGGCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS CAA 90 bp | TCATCCAGTCCAGCTCCAGCACTCACCGCGCTCCTCAGCGCCACCTaGAGGCACTCCAGCCCGAGAATCTGCAGACCCCTCCAGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SSSPAPALTALLSAT*RHSSPRICRPLQVR Trigger: TCTGACCTGGAGGGGTCTGCAGATTCTCGGGCTGGAGTGCCTCAAGGTGGCGCTGAGGAGCGCGGTGAGTGCTGGAGCTGGACTGGATGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS TCA 72 bp | TTCACCATTACAGACCAGCACAGGAAGCCGAACACCTaGCCTGGGTGGAGCCCGTGCCACCAGGCAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: FTITDQHRKPNT*PGWSPCHQAEK Trigger: CTTCTCTGCCTGGTGGCACGGGCTCCACCCAGGTCAGGTGTTCGGCTTCCTGTGCTGGTCTGTAATGGTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS GCA 72 bp | AGCCTCCTGAGCCACAGAGCTGTGCTTCGGTTCCACTaGCTGGCGAACAGGGAGATCCTGTGGGTAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLLSHRAVLRFH*LANREILWVVS Trigger: GGAAACTACCCACAGGATCTCCCTGTTCGCCAGGCAGTGGAACCGAAGCACAGCTCTGTGGCTCAGGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS CAA 90 bp | AAGGCTCCGGCCCTCCACCGCCAGCATGATGTAGGCAATGATGAGTaGGGTATGAGCCCAAGTGAGGGCTCTATAAAGCAGCCGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: KAPALHRQHDVGNDE*GMSPSEGSIKQPQG Trigger: CCCCTGCGGCTGCTTTATAGAGCCCTCACTTGGGCTCATACCCAACTCATCATTGCCTACATCATGCTGGCGGTGGAGGGCCGGAGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS TCA 72 bp | CCTCGGGGCCTCCACCTTCCCTTCACAAATGTCCAGTaGGAGGGATGTGACTCTCTGCGTCAAGAGCATGAG | + |
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Preference number: 6 (lower is better) Translates to: PRGLHLPFTNVQ*EGCDSLRQEHE Trigger: CTCATGCTCTTGACGCAGAGAGTCACATCCCTCTCACTGGACATTTGTGAAGGGAAGGTGGAGGCCCCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS CCA 72 bp | CATCTGAAAGAAGAAGGTCAGCCTATGGACTTCCTGTaGACTGAGGAAGGAGACCAGAGCCACAGCGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: HLKEEGQPMDFL*TEEGDQSHSAE Trigger: CTCTGCGCTGTGGCTCTGGTCTCCTTCCTCAGTCCACAGGAAGTCCATAGGCTGACCTTCTTCTTTCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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| CDS CAA 72 bp | GCCCTCCACCGCCAGCATGATGTAGGCAATGATGAGTaGGGTATGAGCCCAAGTGAGGGCTCTATAAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ALHRQHDVGNDE*GMSPSEGSIKQ Trigger: CTGCTTTATAGAGCCCTCACTTGGGCTCATACCCAACTCATCATTGCCTACATCATGCTGGCGGTGGAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095345.5 |
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