RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MBOAT2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020646

Ensembl transcript IDs: ENSMUST00000078902.8, ENSMUST00000110942.11, ENSMUST00000221952.2, ENSMUST00000222198.2, ENSMUST00000222994.2

Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCACCACACGATATCCTCCGCTGGGGAAGGCAAGCGGAAACACTaGAGGCGCTGGCTATGGGAGCTGAGGCTCTCCTCGAGACAGGCG +
Preference number: 1 (lower is better)
Translates to: THHTISSAGEGKRKH*RRWLWELRLSSRQA
Trigger: CGCCTGTCTCGAGGAGAGCCTCAGCTCCCATAGCCAGCGCCTGCAGTGTTTCCGCTTGCCTTCCCCAGCGGAGGATATCGTGTGGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 90 bp CGTCCCAGGAATCTGTGCCCCTGTCATTCCTACTGCCTCATGCGATaGTCCTTCTGGTGTGGGGGCACCTTCACGTACATAAAGCTGACA +
Preference number: 1 (lower is better)
Translates to: RPRNLCPCHSYCLMR*SFWCGGTFTYIKLT
Trigger: TGTCAGCTTTATGTACGTGAAGGTGCCCCCACACCAGAAGGAGCATCGCATGAGGCAGTAGGAATGACAGGGGCACAGATTCCTGGGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 90 bp CACCTTCATCTTAACACGATGGGGCCTTCACGTCCCAGGAATCTGTaGCCCTGTCATTCCTACTGCCTCATGCGATGCTCCTTCTGGTGT +
Preference number: 1 (lower is better)
Translates to: HLHLNTMGPSRPRNL*PCHSYCLMRCSFWC
Trigger: ACACCAGAAGGAGCATCGCATGAGGCAGTAGGAATGACAGGGGCACAGATTCCTGGGACGTGAAGGCCCCATCGTGTTAAGATGAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR TCA 90 bp CCACCCCATACTTACAGCTGCTGCAGCCCACACCACACTGCTATGTaGTTAAAGACAAACCCAGTCACTCAAGGCAAGAGTGGCCCCCTA +
Preference number: 1 (lower is better)
Translates to: PPHTYSCCSPHHTAM*LKTNPVTQGKSGPL
Trigger: TAGGGGGCCACTCTTGCCTTGAGTGACTGGGTTTGTCTTTAATCACATAGCAGTGTGGTGTGGGCTGCAGCAGCTGTAAGTATGGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR TCA 90 bp CAAGCTTCAGTAATACAAAGCATTGCCAGTTACCAGCTCCCTCTGTaGCCCCGCCCTTCCCTTTGCCCTACAGGATTAGGGGTGGTAGAG +
Preference number: 1 (lower is better)
Translates to: QASVIQSIASYQLPL*PRPSLCPTGLGVVE
Trigger: CTCTACCACCCCTAATCCTGTAGGGCAAAGGGAAGGGCGGGGTCACAGAGGGAGCTGGTAACTGGCAATGCTTTGTATTACTGAAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR TCA 90 bp TTCCATTTTCACTGGGCTGTGCCACGTGGGATGCTCTGCCTTCAATaGAGGCAATGTAGTCTTTGTAGGAGCACAGTGGGCCTGCCAGGA +
Preference number: 1 (lower is better)
Translates to: FHFHWAVPRGMLCLQ*RQCSLCRSTVGLPG
Trigger: TCCTGGCAGGCCCACTGTGCTCCTACAAAGACTACATTGCCTTCATTGAAGGCAGAGCATCCCACGTGGCACAGCCCAGTGAAAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR TCA 90 bp AGACAGGACGGCATCTCCGTTCAGCACGGGCGTCCCTTCTGTGTGTaGTTAAGTCAGCAGCAAAAGTACTTCAGTGACAGATGGGTGTGT +
Preference number: 1 (lower is better)
Translates to: RQDGISVQHGRPFCV*LSQQQKYFSDRWVC
Trigger: ACACACCCATCTGTCACTGAAGTACTTTTGCTGCTGACTTAATCACACACAGAAGGGACGCCCGTGCTGAACGGAGATGCCGTCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 90 bp GGGGTAGCAGATATAAATGGGGTCATCTGTGAGTGGCTAGATCGATaGATCAAGCCTGCAGCAGCTCCCAAAGCTGCTCTGGCTTCACTT +
Preference number: 1 (lower is better)
Translates to: GVADINGVICEWLDR*IKPAAAPKAALASL
Trigger: AAGTGAAGCCAGAGCAGCTTTGGGAGCTGCTGCAGGCTTGATCCATCGATCTAGCCACTCACAGATGACCCCATTTATATCTGCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 90 bp AATCTGTGCCCCTGTCATTCCTACTGCCTCATGCGATGCTCCTTCTaGTGTGGGGGCACCTTCACGTACATAAAGCTGACAGAAGACAGA +
Preference number: 1 (lower is better)
Translates to: NLCPCHSYCLMRCSF*CGGTFTYIKLTEDR
Trigger: TCTGTCTTCTGTCAGCTTTATGTACGTGAAGGTGCCCCCACACCAGAAGGAGCATCGCATGAGGCAGTAGGAATGACAGGGGCACAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 90 bp CAGCCATCACACGCTCTCGCAGTCACTGTGTTAGTGACGAGTGTCTaGAGCCAGTGTCTCGGTTCTGATTGCAAACGTTATTCATCGTGG +
Preference number: 1 (lower is better)
Translates to: QPSHALAVTVLVTSV*SQCLGSDCKRYSSW
Trigger: CCACGATGAATAACGTTTGCAATCAGAACCGAGACACTGGCTCCAGACACTCGTCACTAACACAGTGACTGCGAGAGCGTGTGATGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR GCA 90 bp CTCAAACCCACCCCATACTTACAGCTGCTGCAGCCCACACCACACTaGTATGTGATTAAAGACAAACCCAGTCACTCAAGGCAAGAGTGG +
Preference number: 1 (lower is better)
Translates to: LKPTPYLQLLQPTPH*YVIKDKPSHSRQEW
Trigger: CCACTCTTGCCTTGAGTGACTGGGTTTGTCTTTAATCACATAGCAGTGTGGTGTGGGCTGCAGCAGCTGTAAGTATGGGGTGGGTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 90 bp TTCTCCGTAACTGCTGCATTTGGAGATGGATCTGCTTTCCCATGCTaGTCGTCTTTTCCATTTTCACTGGGCTGTGCCACGTGGGATGCT +
Preference number: 1 (lower is better)
Translates to: FSVTAAFGDGSAFPC*SSFPFSLGCATWDA
Trigger: AGCATCCCACGTGGCACAGCCCAGTGAAAATGGAAAAGACGAGCAGCATGGGAAAGCAGATCCATCTCCAAATGCAGCAGTTACGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR GCA 90 bp AGCTTCTCCGTAACTGCTGCATTTGGAGATGGATCTGCTTTCCCATaGTGCTCGTCTTTTCCATTTTCACTGGGCTGTGCCACGTGGGAT +
Preference number: 1 (lower is better)
Translates to: SFSVTAAFGDGSAFP*CSSFPFSLGCATWD
Trigger: ATCCCACGTGGCACAGCCCAGTGAAAATGGAAAAGACGAGCAGCATGGGAAAGCAGATCCATCTCCAAATGCAGCAGTTACGGAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR GCA 90 bp ACAGACCAGGAGCTTCTCCGTAACTGCTGCATTTGGAGATGGATCTaGTTTCCCATGCTGCTCGTCTTTTCCATTTTCACTGGGCTGTGC +
Preference number: 1 (lower is better)
Translates to: TDQELLRNCCIWRWI*FPMLLVFSIFTGLC
Trigger: GCACAGCCCAGTGAAAATGGAAAAGACGAGCAGCATGGGAAAGCAGATCCATCTCCAAATGCAGCAGTTACGGAGAAGCTCCTGGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CCA 90 bp ACGAAGTCTGTTGGGGTAGCAGATATAAATGGGGTCATCTGTGAGTaGCTAGATCGATGGATCAAGCCTGCAGCAGCTCCCAAAGCTGCT +
Preference number: 1 (lower is better)
Translates to: TKSVGVADINGVICE*LDRWIKPAAAPKAA
Trigger: AGCAGCTTTGGGAGCTGCTGCAGGCTTGATCCATCGATCTAGCCACTCACAGATGACCCCATTTATATCTGCTACCCCAACAGACTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR TCA 90 bp AGAAACGAAGTCTGTTGGGGTAGCAGATATAAATGGGGTCATCTGTaGGTGGCTAGATCGATGGATCAAGCCTGCAGCAGCTCCCAAAGC +
Preference number: 1 (lower is better)
Translates to: RNEVCWGSRYKWGHL*VARSMDQACSSSQS
Trigger: GCTTTGGGAGCTGCTGCAGGCTTGATCCATCGATCTAGCCACTCACAGATGACCCCATTTATATCTGCTACCCCAACAGACTTCGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR TCA 90 bp CAATGTAGTCTTTGTAGGAGCACAGTGGGCCTGCCAGGATGCCCATaGAGTTGCAGGTATAACTTACATACTCCAGGAGACTTGGCATGC +
Preference number: 1 (lower is better)
Translates to: QCSLCRSTVGLPGCP*SCRYNLHTPGDLAC
Trigger: GCATGCCAAGTCTCCTGGAGTATGTAAGTTATACCTGCAACTTCATGGGCATCCTGGCAGGCCCACTGTGCTCCTACAAAGACTACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR GCA 90 bp AATGGGGAGGACTCTAGAGGCCAGGAGAACACTTTCCTCATCAGATaGAACCTATCTTCAGAAAAGCAACCATGCCACGTATGGCTCCCA +
Preference number: 1 (lower is better)
Translates to: NGEDSRGQENTFLIR*NLSSEKQPCHVWLP
Trigger: TGGGAGCCATACGTGGCATGGTTGCTTTTCTGAAGATAGGTTGCATCTGATGAGGAAAGTGTTCTCCTGGCCTCTAGAGTCCTCCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 90 bp ATGCTGCTCGTCTTTTCCATTTTCACTGGGCTGTGCCACGTGGGATaGTCTGCCTTCAATGAAGGCAATGTAGTCTTTGTAGGAGCACAG +
Preference number: 1 (lower is better)
Translates to: MLLVFSIFTGLCHVG*SAFNEGNVVFVGAQ
Trigger: CTGTGCTCCTACAAAGACTACATTGCCTTCATTGAAGGCAGAGCATCCCACGTGGCACAGCCCAGTGAAAATGGAAAAGACGAGCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CCA 90 bp CTCATCAGATGCAACCTATCTTCAGAAAAGCAACCATGCCACGTATaGCTCCCAGGTACGGCATCTGCACCTTTCTTCTTCCTGACATCT +
Preference number: 1 (lower is better)
Translates to: LIRCNLSSEKQPCHV*LPGTASAPFFFLTS
Trigger: AGATGTCAGGAAGAAGAAAGGTGCAGATGCCGTACCTGGGAGCCATACGTGGCATGGTTGCTTTTCTGAAGATAGGTTGCATCTGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 90 bp ATAACCCACTGCTGGTTACAGAAGCAACGTGTAAGAAAACACGGCTaGAGGTGGCTTTGTGTCATCGGACTGCTTTCAGACAGTGGTTGT +
Preference number: 1 (lower is better)
Translates to: ITHCWLQKQRVRKHG*RWLCVIGLLSDSGC
Trigger: ACAACCACTGTCTGAAAGCAGTCCGATGACACAAAGCCACCTCCAGCCGTGTTTTCTTACACGTTGCTTCTGTAACCAGCAGTGGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 90 bp TCATCGATGTTGTACTCCACGGGTAGCATGTTGGAGATGGTCAGGTaGAATAATAAGGAGAGTCCACAGACCAGGAGCTTCTCCGTAACT +
Preference number: 1 (lower is better)
Translates to: SSMLYSTGSMLEMVR*NNKESPQTRSFSVT
Trigger: AGTTACGGAGAAGCTCCTGGTCTGTGGACTCTCCTTATTATTCCACCTGACCATCTCCAACATGCTACCCGTGGAGTACAACATCGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CCA 90 bp GGAAATGCTCATCGATGTTGTACTCCACGGGTAGCATGTTGGAGATaGTCAGGTGGAATAATAAGGAGAGTCCACAGACCAGGAGCTTCT +
Preference number: 1 (lower is better)
Translates to: GNAHRCCTPRVACWR*SGGIIRRVHRPGAS
Trigger: AGAAGCTCCTGGTCTGTGGACTCTCCTTATTATTCCACCTGACCATCTCCAACATGCTACCCGTGGAGTACAACATCGATGAGCATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CCA 90 bp TGGCTTGGAAATGCTCATCGATGTTGTACTCCACGGGTAGCATGTTaGAGATGGTCAGGTGGAATAATAAGGAGAGTCCACAGACCAGGA +
Preference number: 1 (lower is better)
Translates to: WLGNAHRCCTPRVAC*RWSGGIIRRVHRPG
Trigger: TCCTGGTCTGTGGACTCTCCTTATTATTCCACCTGACCATCTCCAACATGCTACCCGTGGAGTACAACATCGATGAGCATTTCCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR TCA 90 bp ACACAGATGACCTTGAGGGCAGATGCTGAGGTCAGAGTGCCCTATTaGAACAAGGGAAGATTTTGTATAAGGCGTGACCCACAGGAACAT +
Preference number: 1 (lower is better)
Translates to: TQMTLRADAEVRVPY*NKGRFCIRRDPQEH
Trigger: ATGTTCCTGTGGGTCACGCCTTATACAAAATCTTCCCTTGTTTCAATAGGGCACTCTGACCTCAGCATCTGCCCTCAAGGTCATCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR CCA 90 bp TGCTCTGCCTTCAATGAAGGCAATGTAGTCTTTGTAGGAGCACAGTaGGCCTGCCAGGATGCCCATGAAGTTGCAGGTATAACTTACATA +
Preference number: 1 (lower is better)
Translates to: CSAFNEGNVVFVGAQ*ACQDAHEVAGITYI
Trigger: TATGTAAGTTATACCTGCAACTTCATGGGCATCCTGGCAGGCCCACTGTGCTCCTACAAAGACTACATTGCCTTCATTGAAGGCAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR GCA 90 bp GCACCTTTCTTCTTCCTGACATCTTTAGGTTCCCACCCCTGTTGCTaGTTCTTCCTTCACCCTACTTACAACGTATTAGTGACAAAAGCC +
Preference number: 1 (lower is better)
Translates to: APFFFLTSLGSHPCC*FFLHPTYNVLVTKA
Trigger: GGCTTTTGTCACTAATACGTTGTAAGTAGGGTGAAGGAAGAAGCAGCAACAGGGGTGGGAACCTAAAGATGTCAGGAAGAAGAAAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 90 bp ACTGTGTTAGTGACGAGTGTCTGGAGCCAGTGTCTCGGTTCTGATTaGAAACGTTATTCATCGTGGAAAAACTGTTCTGTCCCAGAGGAT +
Preference number: 1 (lower is better)
Translates to: TVLVTSVWSQCLGSD*KRYSSWKNCSVPED
Trigger: ATCCTCTGGGACAGAACAGTTTTTCCACGATGAATAACGTTTGCAATCAGAACCGAGACACTGGCTCCAGACACTCGTCACTAACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CCA 90 bp GTCTGGAGCCAGTGTCTCGGTTCTGATTGCAAACGTTATTCATCGTaGAAAAACTGTTCTGTCCCAGAGGATTGTCCCTTTCGTCAAACT +
Preference number: 1 (lower is better)
Translates to: VWSQCLGSDCKRYSS*KNCSVPEDCPFRQT
Trigger: AGTTTGACGAAAGGGACAATCCTCTGGGACAGAACAGTTTTTCCACGATGAATAACGTTTGCAATCAGAACCGAGACACTGGCTCCAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR TCA 90 bp AGATACTACAGACGTGAAGGCAGTAATACCAGGAGCTGTAAAACGTaGACGACGGTTTTATGGAGAGGAGCACAAACGGAACAACTGTGT +
Preference number: 1 (lower is better)
Translates to: RYYRREGSNTRSCKT*TTVLWRGAQTEQLC
Trigger: ACACAGTTGTTCCGTTTGTGCTCCTCTCCATAAAACCGTCGTTCACGTTTTACAGCTCCTGGTATTACTGCCTTCACGTCTGTAGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CCA 90 bp AAGAAGAATGAGAAAGGACATCAGTCAAGTTGGAGTGCTGTGTTATaGGCCAGGAGGAACAGTGATCAGCTGTCTTGCTCTTTGGATGAT +
Preference number: 1 (lower is better)
Translates to: KKNEKGHQSSWSAVL*ARRNSDQLSCSLDD
Trigger: ATCATCCAAAGAGCAAGACAGCTGATCACTGTTCCTCCTGGCCCATAACACAGCACTCCAACTTGACTGATGTCCTTTCTCATTCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 90 bp TCTGCACCTTTCTTCTTCCTGACATCTTTAGGTTCCCACCCCTGTTaGTGCTTCTTCCTTCACCCTACTTACAACGTATTAGTGACAAAA +
Preference number: 1 (lower is better)
Translates to: SAPFFFLTSLGSHPC*CFFLHPTYNVLVTK
Trigger: TTTTGTCACTAATACGTTGTAAGTAGGGTGAAGGAAGAAGCAGCAACAGGGGTGGGAACCTAAAGATGTCAGGAAGAAGAAAGGTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 90 bp GAAACTAAGGGAAGCAACCAGGAAATGGCCTGTTGCTACTCATTCTaGGTTAATGGATCAAAAGGTATTCCTCCTGTTGCTAAGCAACTA +
Preference number: 1 (lower is better)
Translates to: ETKGSNQEMACCYSF*VNGSKGIPPVAKQL
Trigger: TAGTTGCTTAGCAACAGGAGGAATACCTTTTGATCCATTAACCCAGAATGAGTAGCAACAGGCCATTTCCTGGTTGCTTCCCTTAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR CCA 90 bp GCGCTGGCTATGGGAGCTGAGGCTCTCCTCGAGACAGGCGACCAGTGTTCAGGTCCAAAGTGGCATGTGTaGAGACACCCCGTGTGGCCG +
Preference number: 2 (lower is better)
Translates to: ALAMGAEALLETGDQCSGPKWHV*RHPVWP
Trigger: CGGCCACACGGGGTGTCTCCACACATGCCACTTTGG...ACCTGAACACTGGTCGCCTGTCTCGAGGAGAGCCTCAGCTCCCATAGCCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR GCA 90 bp TCTTCCTTAAACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGAAGTGGGAAGCCCTCTaGCACCGGCTCCAGGCTCCG +
Preference number: 2 (lower is better)
Translates to: SSLNKRLCKGLKTGFCSQKWEAL*HRLQAP
Trigger: CGGAGCCTGGAGCCGGTGGCAGAGGGCTTCCCACTT...CTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR CAA 90 bp GTGGGAAGCCCTCTGCCACCGGCTCCAGGCTCCGAGGTGCTTTCCTaGTTCGGGCCTCCTTATCTTAGCTTCCCTCTTATTGTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: VGSPLPPAPGSEVLS*FGPPYLSFPLIVLF
Trigger: AAACAAAACAATAAGAGGGAAGCTAAGATAAGGAGGCCCGAACAAGGAAAGCACCTCGGAGCCTGGAGCCGGTGGCAGAGGGCTTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR TCA 90 bp GCGCTGGCTATGGGAGCTGAGGCTCTCCTCGAGACAGGCGACCAGTGTTCAGGTAAACTCACCGTAGACTaGCAGCTTGCATTTCATTTG +
Preference number: 2 (lower is better)
Translates to: ALAMGAEALLETGDQCSGKLTVD*QLAFHL
Trigger: CAAATGAAATGCAAGCTGTCAGTCTACGGTGAGTTT...ACCTGAACACTGGTCGCCTGTCTCGAGGAGAGCCTCAGCTCCCATAGCCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CAA 90 bp GCTTTAGTCGGCCACGACGCAGTGGCTTGGAAATGCTCATCGATGTaGTACTCCACGGGTAGCATGTTGGAGATGGTCAGGTGGAATAAT +
Preference number: 2 (lower is better)
Translates to: ALVGHDAVAWKCSSM*YSTGSMLEMVRWNN
Trigger: ATTATTCCACCTGACCATCTCCAACATGCTACCCGTGGAGTACAACATCGATGAGCATTTCCAAGCCACTGCGTCGTGGCCGACTAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CCA 90 bp GTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCAGATGCTGAGGTCCACAGGAACATGGCATaGGAGGGGTTATCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: VYIQQQGTQMTLRADAEVHRNMA*EGLSLS
Trigger: GGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTG...GACCTCAGCATCTGCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR CCA 90 bp GCGCTGGCTATGGGAGCTGAGGCTCTCCTCGAGACAGGCGACCAGTGTTCAGGTTTGTCAGTTCTTCACTaGAGTTTGCATTGTGTTAAA +
Preference number: 2 (lower is better)
Translates to: ALAMGAEALLETGDQCSGLSVLH*SLHCVK
Trigger: TTTAACACAATGCAAACTCCAGTGAAGAACTGACAA...ACCTGAACACTGGTCGCCTGTCTCGAGGAGAGCCTCAGCTCCCATAGCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR CCA 90 bp TTAGCACTCCCGTTAGGAATGTCAGATAGTATCCTGGGTAGACCCCATGCCAAATCGGCCACGACGCAGTaGCTTGGAAATGCTCATCGA +
Preference number: 2 (lower is better)
Translates to: LALPLGMSDSILGRPHAKSATTQ*LGNAHR
Trigger: TCGATGAGCATTTCCAAGCCACTGCGTCGTGGCCGA...TTTGGCATGGGGTCTACCCAGGATACTATCTGACATTCCTAACGGGAGTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CAA 90 bp GTGGCTTGGAAATGCTCATCGATGTTGTACTCCACGGGTAGCATGTaGGAGATGGTCAGGTGGAATAATAAGGAGAGTCCACAGACCAGG +
Preference number: 2 (lower is better)
Translates to: VAWKCSSMLYSTGSM*EMVRWNNKESPQTR
Trigger: CCTGGTCTGTGGACTCTCCTTATTATTCCACCTGACCATCTCCAACATGCTACCCGTGGAGTACAACATCGATGAGCATTTCCAAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR TCA 90 bp TCTGTGACCCCGCCCTTCCCTTTGCCCTACAGGATTAGGGGTGGTAGAGAAGGTATCATCCAGACGACATaGTTATTTTCCACCTCTTCA +
Preference number: 2 (lower is better)
Translates to: SVTPPFPLPYRIRGGREGIIQTT*LFSTSS
Trigger: TGAAGAGGTGGAAAATAATCATGTCGTCTGGATGAT...ACCTTCTCTACCACCCCTAATCCTGTAGGGCAAAGGGAAGGGCGGGGTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR TCA 90 bp CCACTGGAACTGTTTTCCTCCAAAGTGGCATGTGTGGAGACACCCCGTGTGGCCATTCTACAGTTAGCTTaGTCTCAACACATGGGAAAG +
Preference number: 2 (lower is better)
Translates to: PLELFSSKVACVETPRVAILQLA*SQHMGK
Trigger: CTTTCCCATGTGTTGAGATCAAGCTAACTGTAGAAT...GGCCACACGGGGTGTCTCCACACATGCCACTTTGGAGGAAAACAGTTCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR TCA 90 bp CTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCCTGCCAGGATGCCCATaGAGTTGCAGGTATAACTTA +
Preference number: 2 (lower is better)
Translates to: LGIRSVHSATGYTDDLEGLPGCP*SCRYNL
Trigger: TAAGTTATACCTGCAACTTCATGGGCATCCTGGCAG...GCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CCA 90 bp TTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGTTGTGTCCCATACAGTTCTCGGACACAGAAGTaGGAAGCCCTCTGCCACCGG +
Preference number: 2 (lower is better)
Translates to: FFRKSTVFSSVSCCVPYSSRTQK*EALCHR
Trigger: CCGGTGGCAGAGGGCTTCCCACTTCTGTGTCCGAGA...ACTGTATGGGACACAACAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR TCA 90 bp CCACTGGAACTGTTTTCCTCCAAAGTGGCATGTGTGGAGACACCCCGTGTGGCCAAATATGATGTAGAGTaGCCATCTCCAGAACGATTT +
Preference number: 2 (lower is better)
Translates to: PLELFSSKVACVETPRVAKYDVE*PSPERF
Trigger: AAATCGTTCTGGAGATGGTCACTCTACATCATATTT...GGCCACACGGGGTGTCTCCACACATGCCACTTTGGAGGAAAACAGTTCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR GCA 90 bp TACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCAGATGCTTTAAACAAGAGGCTCTaGAAAGGCCTCAAGACTGGC +
Preference number: 2 (lower is better)
Translates to: YAVYIQQQGTQMTLRADALNKRL*KGLKTG
Trigger: GCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAA...AGCATCTGCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR GCA 90 bp TACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCAGATGCTTTTCCACCTCTTCAGTaGCTTGGGATACGCAGTGTA +
Preference number: 2 (lower is better)
Translates to: YAVYIQQQGTQMTLRADAFPPLQ*LGIRSV
Trigger: TACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAA...AGCATCTGCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR GCA 90 bp TTAGCACTCCCGTTAGGAATGTCAGATAGTATCCTGGGTAGACCCCATGCCAAAACAGCTAATCCCCTCTaGGACGGAGTCAGTTCTTCA +
Preference number: 2 (lower is better)
Translates to: LALPLGMSDSILGRPHAKTANPL*DGVSSS
Trigger: TGAAGAACTGACTCCGTCGCAGAGGGGATTAGCTGT...TTTGGCATGGGGTCTACCCAGGATACTATCTGACATTCCTAACGGGAGTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CCA 90 bp TTAGCACTCCCGTTAGGAATGTCAGATAGTATCCTGGGTAGACCCCATGCCAAACACAGGAACATGGCATaGGAGGGGTTATCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: LALPLGMSDSILGRPHAKHRNMA*EGLSLS
Trigger: GGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTG...TTTGGCATGGGGTCTACCCAGGATACTATCTGACATTCCTAACGGGAGTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CAA 90 bp CTGGTTACAGAAGCAACGTGTAAGAAAACACGGCTGGAGGTGGCTTaGTGTCATCGGACTGCTTTCAGACAGTGGTTGTACAAGGATCTT +
Preference number: 2 (lower is better)
Translates to: LVTEATCKKTRLEVA*CHRTAFRQWLYKDL
Trigger: AAGATCCTTGTACAACCACTGTCTGAAAGCAGTCCGATGACACAAAGCCACCTCCAGCCGTGTTTTCTTACACGTTGCTTCTGTAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR GCA 90 bp GACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCCAATCTAGTTTAAACAAGAGGCTCTaGAAAGGCCTCAAGACTGGC +
Preference number: 2 (lower is better)
Translates to: DPQEHGMGGVISFHFQSSLNKRL*KGLKTG
Trigger: GCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAA...ACTAGATTGGAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR GCA 90 bp TCCGAGGTGCTTTCCTTGTTCGGGCCTCCTTATCTTAGCTTCCCTCTTATTGTTCTTCTCCGTAACTGCTaGATTTGGAGATGGATCTGC +
Preference number: 2 (lower is better)
Translates to: SEVLSLFGPPYLSFPLIVLLRNC*IWRWIC
Trigger: GCAGATCCATCTCCAAATGCAGCAGTTACGGAGAAG...AACAATAAGAGGGAAGCTAAGATAAGGAGGCCCGAACAAGGAAAGCACCTCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CCA 90 bp TGTTGTGTCCCATACAGTTACACTAATCTCGGACACAGAAGTGGGAAGCCCTCTAGACCCCATGCCAAATaGCAGAGAGAAAGAATGTCT +
Preference number: 2 (lower is better)
Translates to: CCVPYSYTNLGHRSGKPSRPHAK*QRERMS
Trigger: AGACATTCTTTCTCTCTGCCATTTGGCATGGGGTCT...AGAGGGCTTCCCACTTCTGTGTCCGAGATTAGTGTAACTGTATGGGACACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CAA 90 bp GTTAATCATCCAGACGACATGATTATTTTCCACCTCTTCAGTGCCTaGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACC +
Preference number: 2 (lower is better)
Translates to: VNHPDDMIIFHLFSA*GYAVYIQQQGTQMT
Trigger: GGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCGTCTGGATGATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR TCA 90 bp TTAGCACTCCCGTTAGGAATGTCAGATAGTATCCTGGGTAGACCCCATGCCAAAATGCTCTGCCTTCAATaGAGGCAATGTAGTCTTTGT +
Preference number: 2 (lower is better)
Translates to: LALPLGMSDSILGRPHAKMLCLQ*RQCSLC
Trigger: ACAAAGACTACATTGCCTTCATTGAAGGCAGAGCAT...TTTGGCATGGGGTCTACCCAGGATACTATCTGACATTCCTAACGGGAGTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR GCA 90 bp CATCAGTCAAGTTGGAGTGCTGTGTTATGGGCCAGGAGGAACAGTGATCAGCTGACTTTCCTCATCAGATaGAACCTATCTTCAGAAAAG +
Preference number: 2 (lower is better)
Translates to: HQSSWSAVLWARRNSDQLTFLIR*NLSSEK
Trigger: CTTTTCTGAAGATAGGTTGCATCTGATGAGGAAAGT...CAGCTGATCACTGTTCCTCCTGGCCCATAACACAGCACTCCAACTTGACTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR GCA 90 bp TCTTCCTTAAACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGTCTGCTTTCCCATGCTaGTCGTCTTTTCCATTTTCA +
Preference number: 2 (lower is better)
Translates to: SSLNKRLCKGLKTGFCSQSAFPC*SSFPFS
Trigger: TGAAAATGGAAAAGACGAGCAGCATGGGAAAGCAGA...CTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CCA 90 bp TTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGTTGTGTCCCATACAGTCACAGGAACATGGCATaGGAGGGGTTATCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: FFRKSTVFSSVSCCVPYSHRNMA*EGLSLS
Trigger: GGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTG...ACTGTATGGGACACAACAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR CCA 90 bp ATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACACAGGAACATGGCATaGGAGGGGTTATCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: MIIFHLFSALGYAVYIQQHRNMA*EGLSLS
Trigger: GGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTG...TTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR CAA 90 bp GCTGTGTTATGGGCCAGGAGGAACAGTGATCAGCTGTCTTGCTCTTaGGATGATAGAACTATGATTATAAATTCATTACGAGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: AVLWARRNSDQLSCS*DDRTMIINSLRGDR
Trigger: CCTGTCCCCTCGTAATGAATTTATAATCATAGTTCTATCATCCAAAGAGCAAGACAGCTGATCACTGTTCCTCCTGGCCCATAACACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR GCA 90 bp TTTATGCTCGAGGGATTTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGATTTGGAGATGGATCTaGTTTCCCATGCTGCTCGTC +
Preference number: 2 (lower is better)
Translates to: FMLEGFLQKVHSVLISKLIWRWI*FPMLLV
Trigger: GACGAGCAGCATGGGAAAGCAGATCCATCTCCAAAT...CAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAAATCCCTCGAGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR GCA 90 bp GTGTTAGTGACGAGTGTCTGGAGCCAGTGTCTCGGTTCTGATTGCAAACGTTATGAACATTTTCCTGTGTaGTCGTTCTTCTTTGAGACT +
Preference number: 2 (lower is better)
Translates to: VLVTSVWSQCLGSDCKRYEHFPV*SFFFET
Trigger: AGTCTCAAAGAAGAACGAGCACACAGGAAAATGTTC...ATAACGTTTGCAATCAGAACCGAGACACTGGCTCCAGACACTCGTCACTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CCA 90 bp TGTTGTGTCCCATACAGTTACACTAATCTCGGACACAGAAGTGGGAAGCCCTCTGGCAAGACATTCATTTaGAAAAGGTTAATCATCCAG +
Preference number: 2 (lower is better)
Translates to: CCVPYSYTNLGHRSGKPSGKTFI*KRLIIQ
Trigger: CTGGATGATTAACCTTTTCCAAATGAATGTCTTGCC...AGAGGGCTTCCCACTTCTGTGTCCGAGATTAGTGTAACTGTATGGGACACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR CCA 90 bp ATGTCTGGGTCAGTTATAGTGTGGAACTCTTTAAGAGTCAATGAGCTGAAACTTACCTCTTCAGTGCCTTaGGATACGCAGTGTACATTC +
Preference number: 2 (lower is better)
Translates to: MSGSVIVWNSLRVNELKLTSSVP*DTQCTF
Trigger: GAATGTACACTGCGTATCCCAAGGCACTGAAGAGGT...AAGTTTCAGCTCATTGACTCTTAAAGAGTTCCACACTATAACTGACCCAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR TCA 90 bp ATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAATTCCGAAACATCCCCTaGAAAATCAGCAGAATATTG +
Preference number: 2 (lower is better)
Translates to: MIIFHLFSALGYAVYIQQFRNIP*KISRIL
Trigger: CAATATTCTGCTGATTTTTCAGGGGATGTTTCGGAA...TTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR GCA 90 bp ATACCATCCGGGAACAACATTTTAGGAAGATTTAAGGCAAGACATTCATTTGGATTAAACAAGAGGCTCTaGAAAGGCCTCAAGACTGGC +
Preference number: 2 (lower is better)
Translates to: IPSGNNILGRFKARHSFGLNKRL*KGLKTG
Trigger: GCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAA...TCCAAATGAATGTCTTGCCTTAAATCTTCCTAAAATGTTGTTCCCGGATGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR GCA 90 bp TCATCAATAGATTTGACTACATGCTGTCACAGAAAAATCACCGTAGAGAGCTGCAGTGATCAGCTGTCTTaGTCTTTGGATGATAGAACT +
Preference number: 2 (lower is better)
Translates to: SSIDLTTCCHRKITVESCSDQLS*SLDDRT
Trigger: AGTTCTATCATCCAAAGAGCAAGACAGCTGATCACT...GCAGCTCTCTACGGTGATTTTTCTGTGACAGCATGTAGTCAAATCTATTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR CCA 90 bp CAGCCATCCCAAAATAATCCCATGAACGTAACTAGAACGCTGAAGAAGAATGAGGGCAAGACATTCATTTaGAAAAGGTTAATCATCCAG +
Preference number: 2 (lower is better)
Translates to: QPSQNNPMNVTRTLKKNEGKTFI*KRLIIQ
Trigger: CTGGATGATTAACCTTTTCCAAATGAATGTCTTGCC...CTCATTCTTCTTCAGCGTTCTAGTTACGTTCATGGGATTATTTTGGGATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR CCA 90 bp ATGTCTGGGTCAGTTATAGTGTGGAACTCTTTAAGAGTCAATGAGCTGAAACTTTCTAGAAACCTCCACTaGAACTGTTTTCCTCCAAAG +
Preference number: 2 (lower is better)
Translates to: MSGSVIVWNSLRVNELKLSRNLH*NCFPPK
Trigger: CTTTGGAGGAAAACAGTTCCAGTGGAGGTTTCTAGA...AAGTTTCAGCTCATTGACTCTTAAAGAGTTCCACACTATAACTGACCCAGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp ACGATATCCTCCGCTGGGGAAGGCAAGCGGAAACACTaGAGGCGCTGGCTATGGGAGCTGAGGCTCTCCTCG +
Preference number: 3 (lower is better)
Translates to: TISSAGEGKRKH*RRWLWELRLSS
Trigger: CGAGGAGAGCCTCAGCTCCCATAGCCAGCGCCTGCAGTGTTTCCGCTTGCCTTCCCCAGCGGAGGATATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp TCACGTCCCAGGAATCTGTGCCCCTGTCATTCCTACTaGCTCATGCGATGCTCCTTCTGGTGTGGGGGCACC +
Preference number: 3 (lower is better)
Translates to: SRPRNLCPCHSY*LMRCSFWCGGT
Trigger: GGTGCCCCCACACCAGAAGGAGCATCGCATGAGGCAGTAGGAATGACAGGGGCACAGATTCCTGGGACGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp CCAGGAATCTGTGCCCCTGTCATTCCTACTGCCTCATaGGATGCTCCTTCTGGTGTGGGGGCACCTTCACGT +
Preference number: 3 (lower is better)
Translates to: PGICAPVIPTAS*DAPSGVGAPSR
Trigger: ACGTGAAGGTGCCCCCACACCAGAAGGAGCATCGCATGAGGCAGTAGGAATGACAGGGGCACAGATTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR CAA 90 bp GCGCTGGCTATGGGAGCTGAGGCTCTCCTCGAGACAGGCGACCAGTGTTCAGGTGACCTATGGAGCTTCTaGTCAGTTCTTCACTGGAGT +
Preference number: 3 (lower is better)
Translates to: ALAMGAEALLETGDQCSGDLWSF*SVLHWS
Trigger: ACTCCAGTGAAGAACTGACAAGAAGCTCCATAGGTC...ACCTGAACACTGGTCGCCTGTCTCGAGGAGAGCCTCAGCTCCCATAGCCAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp CTTAACACGATGGGGCCTTCACGTCCCAGGAATCTGTaGCCCTGTCATTCCTACTGCCTCATGCGATGCTCC +
Preference number: 3 (lower is better)
Translates to: LNTMGPSRPRNL*PCHSYCLMRCS
Trigger: GGAGCATCGCATGAGGCAGTAGGAATGACAGGGGCACAGATTCCTGGGACGTGAAGGCCCCATCGTGTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR TCA 72 bp CACTGGGCTGTGCCACGTGGGATGCTCTGCCTTCAATaGAGGCAATGTAGTCTTTGTAGGAGCACAGTGGGC +
Preference number: 3 (lower is better)
Translates to: HWAVPRGMLCLQ*RQCSLCRSTVG
Trigger: GCCCACTGTGCTCCTACAAAGACTACATTGCCTTCATTGAAGGCAGAGCATCCCACGTGGCACAGCCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR TCA 72 bp GTAATACAAAGCATTGCCAGTTACCAGCTCCCTCTGTaGCCCCGCCCTTCCCTTTGCCCTACAGGATTAGGG +
Preference number: 3 (lower is better)
Translates to: VIQSIASYQLPL*PRPSLCPTGLG
Trigger: CCCTAATCCTGTAGGGCAAAGGGAAGGGCGGGGTCACAGAGGGAGCTGGTAACTGGCAATGCTTTGTATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp AATCTGTGCCCCTGTCATTCCTACTGCCTCATGCGATaGTCCTTCTGGTGTGGGGGCACCTTCACGTACATA +
Preference number: 3 (lower is better)
Translates to: NLCPCHSYCLMR*SFWCGGTFTYI
Trigger: TATGTACGTGAAGGTGCCCCCACACCAGAAGGAGCATCGCATGAGGCAGTAGGAATGACAGGGGCACAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp AGGAGACTTGGCATGCGCCTCACAGCTAATCCCCTCTaGGACGGAGTCAGTTCTTCATCCTTCCGAAACATC +
Preference number: 3 (lower is better)
Translates to: RRLGMRLTANPL*DGVSSSSFRNI
Trigger: GATGTTTCGGAAGGATGAAGAACTGACTCCGTCGCAGAGGGGATTAGCTGTGAGGCGCATGCCAAGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR GCA 72 bp GTGGCTTTAGTCGGCCACGACGCAGTGGCTTGGAAATaGTCATCGATGTTGTACTCCACGGGTAGCATGTTG +
Preference number: 3 (lower is better)
Translates to: VALVGHDAVAWK*SSMLYSTGSML
Trigger: CAACATGCTACCCGTGGAGTACAACATCGATGAGCATTTCCAAGCCACTGCGTCGTGGCCGACTAAAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CCA 72 bp TCTAGAAACCTCCACTGGAACTGTTTTCCTCCAAAGTaGCATGTGTGGAGACACCCCGTGTGGCCGTCACCA +
Preference number: 3 (lower is better)
Translates to: SRNLHWNCFPPK*HVWRHPVWPSP
Trigger: TGGTGACGGCCACACGGGGTGTCTCCACACATGCCACTTTGGAGGAAAACAGTTCCAGTGGAGGTTTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp GCAACCATGCCACGTATGGCTCCCAGGTACGGCATCTaGACCTTTCTTCTTCCTGACATCTTTAGGTTCCCA +
Preference number: 3 (lower is better)
Translates to: ATMPRMAPRYGI*TFLLPDIFRFP
Trigger: TGGGAACCTAAAGATGTCAGGAAGAAGAAAGGTGCAGATGCCGTACCTGGGAGCCATACGTGGCATGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR CAA 90 bp ATAAGGCGTGACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCGGTACACAGATGACCTaGAGGGCAGATGCTGAGGTC +
Preference number: 3 (lower is better)
Translates to: IRRDPQEHGMGGVISFHFGTQMT*RADAEV
Trigger: GACCTCAGCATCTGCCCTCAAGGTCATCTGTGTACC...GAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTCACGCCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR CAA 90 bp TGTGTCCCATACAGTTACACTAATCTCGGACACAGAAGTGGGAAGCCCTCTGCCCGAGCCACTCCATTCTaGTCGTATCCTCTGAAACCG +
Preference number: 3 (lower is better)
Translates to: CVPYSYTNLGHRSGKPSARATPF*SYPLKP
Trigger: CGGTTTCAGAGGATACGACAAGAATGGAGTGGCTCG...GGCAGAGGGCTTCCCACTTCTGTGTCCGAGATTAGTGTAACTGTATGGGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CAA 90 bp TTGGAAATTAAGTCCCAGCGAGCCACTCCATTCTTGTCGTATCCTCTGAAACCGGGTACACAGATGACCTaGAGGGCAGATGCTGAGGTC +
Preference number: 3 (lower is better)
Translates to: LEIKSQRATPFLSYPLKPGTQMT*RADAEV
Trigger: GACCTCAGCATCTGCCCTCAAGGTCATCTGTGTACC...CGGTTTCAGAGGATACGACAAGAATGGAGTGGCTCGCTGGGACTTAATTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CAA 90 bp TGTGTCCCATACAGTTACACTAATCTCGGACACAGAAGTGGGAAGCCCTCTGCCCACCTCTTCAGTGCCTaGGGATACGCAGTGTACATT +
Preference number: 3 (lower is better)
Translates to: CVPYSYTNLGHRSGKPSAHLFSA*GYAVYI
Trigger: AATGTACACTGCGTATCCCAAGGCACTGAAGAGGTG...GGCAGAGGGCTTCCCACTTCTGTGTCCGAGATTAGTGTAACTGTATGGGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR TCA 72 bp CTTTGTAGGAGCACAGTGGGCCTGCCAGGATGCCCATaGAGTTGCAGGTATAACTTACATACTCCAGGAGAC +
Preference number: 3 (lower is better)
Translates to: LCRSTVGLPGCP*SCRYNLHTPGD
Trigger: GTCTCCTGGAGTATGTAAGTTATACCTGCAACTTCATGGGCATCCTGGCAGGCCCACTGTGCTCCTACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR GCA 72 bp CACCCAGTTAGTCTCTCTTCCTTAAACAAGAGGCTCTaGAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCG +
Preference number: 3 (lower is better)
Translates to: HPVSLSSLNKRL*KGLKTGFCSQP
Trigger: CGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAAGGAAGAGAGACTAACTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR GCA 72 bp CTCATCAGATGCAACCTATCTTCAGAAAAGCAACCATaGCACGTATGGCTCCCAGGTACGGCATCTGCACCT +
Preference number: 3 (lower is better)
Translates to: LIRCNLSSEKQP*HVWLPGTASAP
Trigger: AGGTGCAGATGCCGTACCTGGGAGCCATACGTGGCATGGTTGCTTTTCTGAAGATAGGTTGCATCTGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp AATGTCACCACCTCAAGCTTCAGTAATACAAAGCATTaGCAGTTACCAGCTCCCTCTGTGACCCCGCCCTTC +
Preference number: 3 (lower is better)
Translates to: NVTTSSFSNTKH*QLPAPSVTPPF
Trigger: GAAGGGCGGGGTCACAGAGGGAGCTGGTAACTGGCAATGCTTTGTATTACTGAAGCTTGAGGTGGTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp TTCCTTAAACAAGAGGCTCTGCAAAGGCCTCAAGACTaGCTTCTGTTCACAGCCGGGAAACAGCCATCACAC +
Preference number: 3 (lower is better)
Translates to: FLKQEALQRPQD*LLFTAGKQPSH
Trigger: GTGTGATGGCTGTTTCCCGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR CCA 72 bp GATATAAATGGGGTCATCTGTGAGTGGCTAGATCGATaGATCAAGCCTGCAGCAGCTCCCAAAGCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: DINGVICEWLDR*IKPAAAPKAAL
Trigger: CAGAGCAGCTTTGGGAGCTGCTGCAGGCTTGATCCATCGATCTAGCCACTCACAGATGACCCCATTTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp CACGCTCTCGCAGTCACTGTGTTAGTGACGAGTGTCTaGAGCCAGTGTCTCGGTTCTGATTGCAAACGTTAT +
Preference number: 3 (lower is better)
Translates to: HALAVTVLVTSV*SQCLGSDCKRY
Trigger: ATAACGTTTGCAATCAGAACCGAGACACTGGCTCCAGACACTCGTCACTAACACAGTGACTGCGAGAGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CAA 90 bp TCTTCCTTAAACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCACGACGCAGTGGCTaGGAAATGCTCATCGATGTT +
Preference number: 3 (lower is better)
Translates to: SSLNKRLCKGLKTGFCSQPRRSG*EMLIDV
Trigger: AACATCGATGAGCATTTCCAAGCCACTGCGTCGTGG...CTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR TCA 72 bp GTGAGAAGCAGAAAGTTAGCCTTGAGGGCAATCGGATaGATGATCAACCATTCCTCAGATGCCGCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: VRSRKLALRAIG*MINHSSDAAGG
Trigger: TCCACCAGCGGCATCTGAGGAATGGTTGATCATTCATCCGATTGCCCTCAAGGCTAACTTTCTGCTTCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp ACCCCATACTTACAGCTGCTGCAGCCCACACCACACTaGTATGTGATTAAAGACAAACCCAGTCACTCAAGG +
Preference number: 3 (lower is better)
Translates to: TPYLQLLQPTPH*YVIKDKPSHSR
Trigger: CCTTGAGTGACTGGGTTTGTCTTTAATCACATAGCAGTGTGGTGTGGGCTGCAGCAGCTGTAAGTATGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp TGCTGGTTACAGAAGCAACGTGTAAGAAAACACGGCTaGAGGTGGCTTTGTGTCATCGGACTGCTTTCAGAC +
Preference number: 3 (lower is better)
Translates to: CWLQKQRVRKHG*RWLCVIGLLSD
Trigger: GTCTGAAAGCAGTCCGATGACACAAAGCCACCTCCAGCCGTGTTTTCTTACACGTTGCTTCTGTAACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp TTGTACTCCACGGGTAGCATGTTGGAGATGGTCAGGTaGAATAATAAGGAGAGTCCACAGACCAGGAGCTTC +
Preference number: 3 (lower is better)
Translates to: LYSTGSMLEMVR*NNKESPQTRSF
Trigger: GAAGCTCCTGGTCTGTGGACTCTCCTTATTATTCCACCTGACCATCTCCAACATGCTACCCGTGGAGTACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CAA 90 bp CTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCGGTCAGAGTGCCCTATaGAAACAAGGGAAGATTTTG +
Preference number: 3 (lower is better)
Translates to: LGIRSVHSATGYTDDLEGGQSAL*KQGKIL
Trigger: CAAAATCTTCCCTTGTTTCAATAGGGCACTCTGACC...GCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR-3UTR CAA 90 bp TCGTATCCTCTGAAACCGAAGCCCGCAGCATTGTTAATGGCGTCAGCTAAGGTCGGTCAGAGTGCCCTATaGAAACAAGGGAAGATTTTG +
Preference number: 3 (lower is better)
Translates to: SYPLKPKPAALLMASAKVGQSAL*KQGKIL
Trigger: CAAAATCTTCCCTTGTTTCAATAGGGCACTCTGACC...GACCTTAGCTGACGCCATTAACAATGCTGCGGGCTTCGGTTTCAGAGGATACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR TCA 72 bp ACCTTGAGGGCAGATGCTGAGGTCAGAGTGCCCTATTaGAACAAGGGAAGATTTTGTATAAGGCGTGACCCA +
Preference number: 3 (lower is better)
Translates to: TLRADAEVRVPY*NKGRFCIRRDP
Trigger: TGGGTCACGCCTTATACAAAATCTTCCCTTGTTTCAATAGGGCACTCTGACCTCAGCATCTGCCCTCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR TCA 72 bp ACTTACAGCTGCTGCAGCCCACACCACACTGCTATGTaGTTAAAGACAAACCCAGTCACTCAAGGCAAGAGT +
Preference number: 3 (lower is better)
Translates to: TYSCCSPHHTAM*LKTNPVTQGKS
Trigger: ACTCTTGCCTTGAGTGACTGGGTTTGTCTTTAATCACATAGCAGTGTGGTGTGGGCTGCAGCAGCTGTAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp TTCAATGAAGGCAATGTAGTCTTTGTAGGAGCACAGTaGGCCTGCCAGGATGCCCATGAAGTTGCAGGTATA +
Preference number: 3 (lower is better)
Translates to: FNEGNVVFVGAQ*ACQDAHEVAGI
Trigger: TATACCTGCAACTTCATGGGCATCCTGGCAGGCCCACTGTGCTCCTACAAAGACTACATTGCCTTCATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CCA 72 bp CATCGATGTTGTACTCCACGGGTAGCATGTTGGAGATaGTCAGGTGGAATAATAAGGAGAGTCCACAGACCA +
Preference number: 3 (lower is better)
Translates to: HRCCTPRVACWR*SGGIIRRVHRP
Trigger: TGGTCTGTGGACTCTCCTTATTATTCCACCTGACCATCTCCAACATGCTACCCGTGGAGTACAACATCGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CAA 90 bp CTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACGGTCAGAGTGCCCTATaGAAACAAGGGAAGATTTTG +
Preference number: 3 (lower is better)
Translates to: LQCLGIRSVHSATGYTDDGQSAL*KQGKIL
Trigger: CAAAATCTTCCCTTGTTTCAATAGGGCACTCTGACC...GTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR TCA 72 bp AGACGTGAAGGCAGTAATACCAGGAGCTGTAAAACGTaGACGACGGTTTTATGGAGAGGAGCACAAACGGAA +
Preference number: 3 (lower is better)
Translates to: RREGSNTRSCKT*TTVLWRGAQTE
Trigger: TTCCGTTTGTGCTCCTCTCCATAAAACCGTCGTTCACGTTTTACAGCTCCTGGTATTACTGCCTTCACGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR GCA 72 bp TCATCCAGACGACATGATTATTTTCCACCTCTTCAGTaGCTTGGGATACGCAGTGTACATTCAGCAACAGGG +
Preference number: 3 (lower is better)
Translates to: SSRRHDYFPPLQ*LGIRSVHSATG
Trigger: CCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCGTCTGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR GCA 72 bp GACTCTAGAGGCCAGGAGAACACTTTCCTCATCAGATaGAACCTATCTTCAGAAAAGCAACCATGCCACGTA +
Preference number: 3 (lower is better)
Translates to: DSRGQENTFLIR*NLSSEKQPCHV
Trigger: TACGTGGCATGGTTGCTTTTCTGAAGATAGGTTGCATCTGATGAGGAAAGTGTTCTCCTGGCCTCTAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp GTCTTTTCCATTTTCACTGGGCTGTGCCACGTGGGATaGTCTGCCTTCAATGAAGGCAATGTAGTCTTTGTA +
Preference number: 3 (lower is better)
Translates to: VFSIFTGLCHVG*SAFNEGNVVFV
Trigger: TACAAAGACTACATTGCCTTCATTGAAGGCAGAGCATCCCACGTGGCACAGCCCAGTGAAAATGGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CCA 72 bp ACGCTGAAGAAGAATGAGAAAGGACATCAGTCAAGTTaGAGTGCTGTGTTATGGGCCAGGAGGAACAGTGAT +
Preference number: 3 (lower is better)
Translates to: TLKKNEKGHQSS*SAVLWARRNSD
Trigger: ATCACTGTTCCTCCTGGCCCATAACACAGCACTCCAACTTGACTGATGTCCTTTCTCATTCTTCTTCAGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp AATGCTCATCGATGTTGTACTCCACGGGTAGCATGTTaGAGATGGTCAGGTGGAATAATAAGGAGAGTCCAC +
Preference number: 3 (lower is better)
Translates to: NAHRCCTPRVAC*RWSGGIIRRVH
Trigger: GTGGACTCTCCTTATTATTCCACCTGACCATCTCCAACATGCTACCCGTGGAGTACAACATCGATGAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR CCA 72 bp TCTGTCCCAGAGGATTGTCCCTTTCGTCAAACTTTTTaGCCTGTGAGAGATGAACATTTTCCTGTGTGCTCG +
Preference number: 3 (lower is better)
Translates to: SVPEDCPFRQTF*PVRDEHFPVCS
Trigger: CGAGCACACAGGAAAATGTTCATCTCTCACAGGCCAAAAAGTTTGACGAAAGGGACAATCCTCTGGGACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR-3UTR CAA 90 bp TGCTCGAGGGATTTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGTTGTCAACTGTGTAACTTATaGTTATCTGGGTGGCCACCC +
Preference number: 3 (lower is better)
Translates to: CSRDFFRKSTVFSSVSCCQLCNL*LSGWPP
Trigger: GGGTGGCCACCCAGATAACAATAAGTTACACAGTTG...ACAACAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAAATCCCTCGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
3UTR GCA 72 bp TTCTTCCTGACATCTTTAGGTTCCCACCCCTGTTGCTaGTTCTTCCTTCACCCTACTTACAACGTATTAGTG +
Preference number: 3 (lower is better)
Translates to: FFLTSLGSHPCC*FFLHPTYNVLV
Trigger: CACTAATACGTTGTAAGTAGGGTGAAGGAAGAAGCAGCAACAGGGGTGGGAACCTAAAGATGTCAGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp GGAAGCAACCAGGAAATGGCCTGTTGCTACTCATTCTaGGTTAATGGATCAAAAGGTATTCCTCCTGTTGCT +
Preference number: 3 (lower is better)
Translates to: GSNQEMACCYSF*VNGSKGIPPVA
Trigger: AGCAACAGGAGGAATACCTTTTGATCCATTAACCCAGAATGAGTAGCAACAGGCCATTTCCTGGTTGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR CAA 90 bp ATAAGGCGTGACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCAGGCAAGACATTCATTaGGAAAAGGTTAATCATCCA +
Preference number: 3 (lower is better)
Translates to: IRRDPQEHGMGGVISFHFRQDIH*EKVNHP
Trigger: TGGATGATTAACCTTTTCCAAATGAATGTCTTGCCT...GAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTCACGCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR TCA 72 bp CGGACTGCTTTCAGACAGTGGTTGTACAAGGATCTTTaGAGGGTTATTTATAGAACAGACAGGCTGTCCCTT +
Preference number: 3 (lower is better)
Translates to: RTAFRQWLYKDL*RVIYRTDRLSL
Trigger: AAGGGACAGCCTGTCTGTTCTATAAATAACCCTTCAAAGATCCTTGTACAACCACTGTCTGAAAGCAGTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp TTCTTCTTCCTGACATCTTTAGGTTCCCACCCCTGTTaGTGCTTCTTCCTTCACCCTACTTACAACGTATTA +
Preference number: 3 (lower is better)
Translates to: FFFLTSLGSHPC*CFFLHPTYNVL
Trigger: TAATACGTTGTAAGTAGGGTGAAGGAAGAAGCAGCAACAGGGGTGGGAACCTAAAGATGTCAGGAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp GTGATTAAAGACAAACCCAGTCACTCAAGGCAAGAGTaGCCCCCTAAGAGGAAAGCACGTATTTGTTTAGAT +
Preference number: 3 (lower is better)
Translates to: VIKDKPSHSRQE*PPKRKARICLD
Trigger: ATCTAAACAAATACGTGCTTTCCTCTTAGGGGGCCACTCTTGCCTTGAGTGACTGGGTTTGTCTTTAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp CAGCAGAAACAGAAACTAAGGGAAGCAACCAGGAAATaGCCTGTTGCTACTCATTCTGGGTTAATGGATCAA +
Preference number: 3 (lower is better)
Translates to: QQKQKLREATRK*PVATHSGLMDQ
Trigger: TTGATCCATTAACCCAGAATGAGTAGCAACAGGCCATTTCCTGGTTGCTTCCCTTAGTTTCTGTTTCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp GCTTTCTGTAACTTCTGGCTTTATAGTATAACCCACTaGTGGTTACAGAAGCAACGTGTAAGAAAACACGGC +
Preference number: 3 (lower is better)
Translates to: AFCNFWLYSITH*WLQKQRVRKHG
Trigger: GCCGTGTTTTCTTACACGTTGCTTCTGTAACCAGCAGTGGGTTATACTATAAAGCCAGAAGTTACAGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp GACCATCTCCAGAACGATTTTGGGATACTCAAGAAATaGGAAAATCCTATAAGCACACAGCAAACCCTGTTC +
Preference number: 3 (lower is better)
Translates to: DHLQNDFGILKK*ENPISTQQTLF
Trigger: GAACAGGGTTTGCTGTGTGCTTATAGGATTTTCCCATTTCTTGAGTATCCCAAAATCGTTCTGGAGATGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp TTCTGTAACTTCTGGCTTTATAGTATAACCCACTGCTaGTTACAGAAGCAACGTGTAAGAAAACACGGCTGG +
Preference number: 3 (lower is better)
Translates to: FCNFWLYSITHC*LQKQRVRKHGW
Trigger: CCAGCCGTGTTTTCTTACACGTTGCTTCTGTAACCAGCAGTGGGTTATACTATAAAGCCAGAAGTTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR GCA 72 bp ACAGAAACTAAGGGAAGCAACCAGGAAATGGCCTGTTaGTACTCATTCTGGGTTAATGGATCAAAAGGTATT +
Preference number: 3 (lower is better)
Translates to: TETKGSNQEMAC*YSFWVNGSKGI
Trigger: AATACCTTTTGATCCATTAACCCAGAATGAGTAGCAACAGGCCATTTCCTGGTTGCTTCCCTTAGTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp GAAAATCCTATAAGCACACAGCAAACCCTGTTCTGCTaGTTAAATGCAGTAAACACATGGTATAAGGACCTC +
Preference number: 3 (lower is better)
Translates to: ENPISTQQTLFC*LNAVNTWYKDL
Trigger: GAGGTCCTTATACCATGTGTTTACTGCATTTAACCAGCAGAACAGGGTTTGCTGTGTGCTTATAGGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR CAA 90 bp ACACAGCAATCAGGATTCTTTGAAACCCACAGAACCTTCTCTCCATCTCTGAGTAGGCAAGACATTCATTaGGAAAAGGTTAATCATCCA +
Preference number: 3 (lower is better)
Translates to: TQQSGFFETHRTFSPSLSRQDIH*EKVNHP
Trigger: TGGATGATTAACCTTTTCCAAATGAATGTCTTGCCT...ACTCAGAGATGGAGAGAAGGTTCTGTGGGTTTCAAAGAATCCTGATTGCTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR-3UTR CAA 90 bp CAGCCATCCCAAAATAATCCCATGAACGTAACTAGAACGCTGAAGAAGAATGAGAATTCTACAGTTAGCTaGATCTCAACACATGGGAAA +
Preference number: 3 (lower is better)
Translates to: QPSQNNPMNVTRTLKKNENSTVS*ISTHGK
Trigger: TTTCCCATGTGTTGAGATCAAGCTAACTGTAGAATT...CTCATTCTTCTTCAGCGTTCTAGTTACGTTCATGGGATTATTTTGGGATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR TCA 72 bp ACATTCATTTGGAAAAGGTTAATCATCCAGACGACATaGTTATTTTCCACCTCTTCAGTGCCTTGGGATACG +
Preference number: 3 (lower is better)
Translates to: TFIWKRLIIQTT*LFSTSSVPWDT
Trigger: CGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCGTCTGGATGATTAACCTTTTCCAAATGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR CCA 72 bp GTTCTGTTTGACAAAATTTCCCCAATCAATGACCTATaGAGCTTCTTGTCAGTTCTTCACTGGAGTTTGCAT +
Preference number: 3 (lower is better)
Translates to: VLFDKISPINDL*SFLSVLHWSLH
Trigger: ATGCAAACTCCAGTGAAGAACTGACAAGAAGCTCCATAGGTCATTGATTGGGGAAATTTTGTCAAACAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp TCTACTCTCTCAAGAATGTCTGGGTCAGTTATAGTGTaGAACTCTTTAAGAGTCAATGAGCTGAAACTTATG +
Preference number: 3 (lower is better)
Translates to: STLSRMSGSVIV*NSLRVNELKLM
Trigger: CATAAGTTTCAGCTCATTGACTCTTAAAGAGTTCCACACTATAACTGACCCAGACATTCTTGAGAGAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR TCA 72 bp AACTCTTTAAGAGTCAATGAGCTGAAACTTATGAACTaGTCAGGAAGCTGTAGGTACCATGTTCTAGATTTG +
Preference number: 3 (lower is better)
Translates to: NSLRVNELKLMN*SGSCRYHVLDL
Trigger: CAAATCTAGAACATGGTACCTACAGCTTCCTGATCAGTTCATAAGTTTCAGCTCATTGACTCTTAAAGAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CCA 72 bp AATTACTCTAAACACGTCTACTCTCTCAAGAATGTCTaGGTCAGTTATAGTGTGGAACTCTTTAAGAGTCAA +
Preference number: 3 (lower is better)
Translates to: NYSKHVYSLKNV*VSYSVELFKSQ
Trigger: TTGACTCTTAAAGAGTTCCACACTATAACTGACCCAGACATTCTTGAGAGAGTAGACGTGTTTAGAGTAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp TGTGTCCCATACAGTTACACTAATCTCGGACACAGAAGTGGGAAGCCCTCTGCCGTTGCACGGCGTTGCTaGGGGGCTGCAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CVPYSYTNLGHRSGKPSAVARRC*GAAAGW
Trigger: CCACCCTGCTGCAGCCCCTCAGCAACGCCGTGCAAC...GGCAGAGGGCTTCCCACTTCTGTGTCCGAGATTAGTGTAACTGTATGGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000221952.2
ENSMUST00000222994.2
CDS-3UTR TCA 90 bp TTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCGTTGCACGGCGTTGCTaGGGGGCTGCAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSALGYAVYIQQQGTQMTVARRC*GAAAGW
Trigger: CCACCCTGCTGCAGCCCCTCAGCAACGCCGTGCAAC...GGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR CAA 72 bp CCTCTGCCACCGGCTCCAGGCTCCGAGGTGCTTTCCTaGTTCGGGCCTCCTTATCTTAGCTTCCCTCTTATT +
Preference number: 4 (lower is better)
Translates to: PLPPAPGSEVLS*FGPPYLSFPLI
Trigger: AATAAGAGGGAAGCTAAGATAAGGAGGCCCGAACAAGGAAAGCACCTCGGAGCCTGGAGCCGGTGGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
ENSMUST00000222994.2
3UTR CAA 72 bp GGCCACGACGCAGTGGCTTGGAAATGCTCATCGATGTaGTACTCCACGGGTAGCATGTTGGAGATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GHDAVAWKCSSM*YSTGSMLEMVR
Trigger: CCTGACCATCTCCAACATGCTACCCGTGGAGTACAACATCGATGAGCATTTCCAAGCCACTGCGTCGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
CDS-3UTR CCA 90 bp AACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCGGGAAACTCGGCCACGACGCAGTaGCTTGGAAATGCTCATCGA +
Preference number: 4 (lower is better)
Translates to: NKRLCKGLKTGFCSQPGNSATTQ*LGNAHR
Trigger: TCGATGAGCATTTCCAAGCCACTGCGTCGTGGCCGA...GTTTCCCGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp ACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCGGGAAACAGCAACATCTGATCGATaGGCAGTTGCACGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: TRGSAKASRLASVHSRETATSDR*AVARRC
Trigger: GCAACGCCGTGCAACTGCCCATCGATCAGATGTTGC...TGTTTCCCGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
CDS-3UTR CCA 90 bp TCTGTGACCCCGCCCTTCCCTTTGCCCTACAGGATTAGGGGTGGTAGAGAAGGTCGTAATGATCATCATTaGGTGCTGCATGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SVTPPFPLPYRIRGGREGRNDHH*VLHALH
Trigger: GTGGAGAGCATGCAGCACCCAATGATGATCATTACG...ACCTTCTCTACCACCCCTAATCCTGTAGGGCAAAGGGAAGGGCGGGGTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp GCGCTGGCTATGGGAGCTGAGGCTCTCCTCGAGACAGGCGACCAGTGTTCAGGTAAACGTTATTCATCGTaGAAAAACTGTTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: ALAMGAEALLETGDQCSGKRYSS*KNCSVP
Trigger: TGGGACAGAACAGTTTTTCCACGATGAATAACGTTT...ACCTGAACACTGGTCGCCTGTCTCGAGGAGAGCCTCAGCTCCCATAGCCAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp ACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCGGGAAACAGTGCTCGTTCTTCTTTaGGACTTTTTCACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TRGSAKASRLASVHSRETVLVLL*DFFTGS
Trigger: GCTGCCTGTGAAAAAGTCTCAAAGAAGAACGAGCAC...TGTTTCCCGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp AACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCGGGAAACATTTGGAGATGGATCTaGTTTCCCATGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: NKRLCKGLKTGFCSQPGNIWRWI*FPMLLV
Trigger: GACGAGCAGCATGGGAAAGCAGATCCATCTCCAAAT...GTTTCCCGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp ACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCGGGAAACACTTCTCCGTAACTGCTaGATTTGGAGATGGATCTGC +
Preference number: 4 (lower is better)
Translates to: TRGSAKASRLASVHSRETLLRNC*IWRWIC
Trigger: GCAGATCCATCTCCAAATGCAGCAGTTACGGAGAAG...TGTTTCCCGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp AACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCGGGAAACGCAGTGGCTTGGAAATaGTCATCGATGTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: NKRLCKGLKTGFCSQPGNAVAWK*SSMLYS
Trigger: GGAGTACAACATCGATGAGCATTTCCAAGCCACTGC...GTTTCCCGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp ACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCGGGAAACAACAAAGCAACATTGCTaGATGCTCTCCACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TRGSAKASRLASVHSRETTKQHC*MLSTPA
Trigger: AGCAGGAGTGGAGAGCATGCAGCAATGTTGCTTTGT...TGTTTCCCGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110942.11
CDS-3UTR CCA 90 bp AGGCGTGACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCCAACCACGGGTAGCATGTTaGAGATGGTCAGGTGGAATA +
Preference number: 4 (lower is better)
Translates to: RRDPQEHGMGGVISFHFQPRVAC*RWSGGI
Trigger: TATTCCACCTGACCATCTCCAACATGCTACCCGTGG...TTGGAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTCACGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp TTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCCATAGCACACCCTTTTaGGCCAAAGAGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: FSALGYAVYIQQQGTQMTHSTPF*AKELSG
Trigger: TCCAGACAGCTCTTTGGCTCAAAAGGGTGTGCTATG...GGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp AACAAGGGAAGATTTTGTATAAGGCGTGACCCACAGGAACATGGCATGGGAGGGACTACAAAGTTGACCTaGTCGATGGGCAGTTGCACG +
Preference number: 4 (lower is better)
Translates to: NKGRFCIRRDPQEHGMGGTTKLT*SMGSCT
Trigger: CGTGCAACTGCCCATCGATCAGGTCAACTTTGTAGT...CCCTCCCATGCCATGTTCCTGTGGGTCACGCCTTATACAAAATCTTCCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp AACAAGGGAAGATTTTGTATAAGGCGTGACCCACAGGAACATGGCATGGGAGGGACAGCTAATCCCCTCTaGGACGGAGTCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NKGRFCIRRDPQEHGMGGTANPL*DGVSSS
Trigger: TGAAGAACTGACTCCGTCGCAGAGGGGATTAGCTGT...CCCTCCCATGCCATGTTCCTGTGGGTCACGCCTTATACAAAATCTTCCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp TGTGTCCCATACAGTTACACTAATCTCGGACACAGAAGTGGGAAGCCCTCTGCCGCAGTGGCTTGGAAATaGTCATCGATGTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: CVPYSYTNLGHRSGKPSAAVAWK*SSMLYS
Trigger: GGAGTACAACATCGATGAGCATTTCCAAGCCACTGC...GGCAGAGGGCTTCCCACTTCTGTGTCCGAGATTAGTGTAACTGTATGGGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp AGGCGTGACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCCAAGCAGTGGCTTGGAAATaGTCATCGATGTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: RRDPQEHGMGGVISFHFQAVAWK*SSMLYS
Trigger: GGAGTACAACATCGATGAGCATTTCCAAGCCACTGC...TTGGAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTCACGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp CTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCCACGGGTAGCATGTTaGAGATGGTCAGGTGGAATA +
Preference number: 4 (lower is better)
Translates to: LQCLGIRSVHSATGYTDDPRVAC*RWSGGI
Trigger: TATTCCACCTGACCATCTCCAACATGCTACCCGTGG...GTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp ACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCGGGAAACATGTCAGATAGTATCCTaGGTAGACCCCATGCCAAAT +
Preference number: 4 (lower is better)
Translates to: TRGSAKASRLASVHSRETCQIVS*VDPMPN
Trigger: ATTTGGCATGGGGTCTACCCAGGATACTATCTGACA...TGTTTCCCGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
3UTR CAA 72 bp GAAGCAACGTGTAAGAAAACACGGCTGGAGGTGGCTTaGTGTCATCGGACTGCTTTCAGACAGTGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: EATCKKTRLEVA*CHRTAFRQWLY
Trigger: GTACAACCACTGTCTGAAAGCAGTCCGATGACACAAAGCCACCTCCAGCCGTGTTTTCTTACACGTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CAA 72 bp AAGTTGGAAATTAAGTCCCAGCGAGCCACTCCATTCTaGTCGTATCCTCTGAAACCGAAGCCCGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: KLEIKSQRATPF*SYPLKPKPAAL
Trigger: CAATGCTGCGGGCTTCGGTTTCAGAGGATACGACAAGAATGGAGTGGCTCGCTGGGACTTAATTTCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
CDS-3UTR TCA 90 bp TTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCTTGGCCTGTGAGAGATaGACATTTTCCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: FSALGYAVYIQQQGTQMTLACER*TFSCVL
Trigger: GAGCACACAGGAAAATGTTCATCTCTCACAGGCCAA...GGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp TACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCAGATGCTTTGGCCTGTGAGAGATaGACATTTTCCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: YAVYIQQQGTQMTLRADALACER*TFSCVL
Trigger: GAGCACACAGGAAAATGTTCATCTCTCACAGGCCAA...AGCATCTGCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp AACAAGGGAAGATTTTGTATAAGGCGTGACCCACAGGAACATGGCATGGGAGGGTTGGCCTGTGAGAGATaGACATTTTCCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NKGRFCIRRDPQEHGMGGLACER*TFSCVL
Trigger: GAGCACACAGGAAAATGTTCATCTCTCACAGGCCAA...CCCTCCCATGCCATGTTCCTGTGGGTCACGCCTTATACAAAATCTTCCCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp CTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACATGATCATCATTGGGTaGTGCATGCTCTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: LQCLGIRSVHSATGYTDDMIIIG*CMLSTP
Trigger: AGGAGTGGAGAGCATGCAGCACCCAATGATGATCAT...GTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp AGACGACATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCGGCCACGACGCAGTaGCTTGGAAATGCTCATCGA +
Preference number: 4 (lower is better)
Translates to: RRHDYFPPLQCLGIRSVHSATTQ*LGNAHR
Trigger: TCGATGAGCATTTCCAAGCCACTGCGTCGTGGCCGA...ATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp TGTGTCCCATACAGTTACACTAATCTCGGACACAGAAGTGGGAAGCCCTCTGCCAACAAGGCAAAGAGCTaGCACACTACAAAGTTGACC +
Preference number: 4 (lower is better)
Translates to: CVPYSYTNLGHRSGKPSANKAKS*HTTKLT
Trigger: GGTCAACTTTGTAGTGTGCCAGCTCTTTGCCTTGTT...GGCAGAGGGCTTCCCACTTCTGTGTCCGAGATTAGTGTAACTGTATGGGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp TCCGAGGTGCTTTCCTTGTTCGGGCCTCCTTATCTTAGCTTCCCTCTTATTGTTGTGCTCGTTCTTCTTTaGGACTTTTTCACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SEVLSLFGPPYLSFPLIVVLVLL*DFFTGS
Trigger: GCTGCCTGTGAAAAAGTCTCAAAGAAGAACGAGCAC...AACAATAAGAGGGAAGCTAAGATAAGGAGGCCCGAACAAGGAAAGCACCTCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp TCTCTCTTCCTTAAACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCGTGCTCGTTCTTCTTTaGGACTTTTTCACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLFLKQEALQRPQDWLLFVLVLL*DFFTGS
Trigger: GCTGCCTGTGAAAAAGTCTCAAAGAAGAACGAGCAC...GAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAAGGAAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTAAACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCCTTCTCCGTAACTGCTaGATTTGGAGATGGATCTGC +
Preference number: 4 (lower is better)
Translates to: SLFLKQEALQRPQDWLLFLLRNC*IWRWIC
Trigger: GCAGATCCATCTCCAAATGCAGCAGTTACGGAGAAG...GAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAAGGAAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp ACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCACAGCCGGGAAACAGAACATTTTCCTGTGTaGTCGTTCTTCTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: TRGSAKASRLASVHSRETEHFPV*SFFFET
Trigger: AGTCTCAAAGAAGAACGAGCACACAGGAAAATGTTC...TGTTTCCCGGCTGTGAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp CTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACAGACCCCATGCCAAATaGCAGAGAGAAAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: LQCLGIRSVHSATGYTDDRPHAK*QRERMS
Trigger: AGACATTCTTTCTCTCTGCCATTTGGCATGGGGTCT...GTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp TACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCAGATGCTAGACCCCATGCCAAATaGCAGAGAGAAAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: YAVYIQQQGTQMTLRADARPHAK*QRERMS
Trigger: AGACATTCTTTCTCTCTGCCATTTGGCATGGGGTCT...AGCATCTGCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp ATAAGGCGTGACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCTGTCAGATAGTATCCTaGGTAGACCCCATGCCAAAT +
Preference number: 4 (lower is better)
Translates to: IRRDPQEHGMGGVISFHFCQIVS*VDPMPN
Trigger: ATTTGGCATGGGGTCTACCCAGGATACTATCTGACA...GAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTCACGCCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp CGACATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCACATAGCACACCCTTTTaGGCCAAAGAGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RHDYFPPLQCLGIRSVHSHSTPF*AKELSG
Trigger: TCCAGACAGCTCTTTGGCTCAAAAGGGTGTGCTATG...TGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp CACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCCAATCTAGTGTATACTACAAAGTTGACCTaGTCGATGGGCAGTTGCACG +
Preference number: 4 (lower is better)
Translates to: HRNMAWEGLSLSISNLVYTTKLT*SMGSCT
Trigger: CGTGCAACTGCCCATCGATCAGGTCAACTTTGTAGT...ATACACTAGATTGGAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp AACAAGGGAAGATTTTGTATAAGGCGTGACCCACAGGAACATGGCATGGGAGGGAGTAATCTGACACACTaGGAGGTATCCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: NKGRFCIRRDPQEHGMGGSNLTH*EVSQSK
Trigger: TTTGCTTTGGGATACCTCTCAGTGTGTCAGATTACT...CCCTCCCATGCCATGTTCCTGTGGGTCACGCCTTATACAAAATCTTCCCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110942.11
ENSMUST00000222994.2
CDS-3UTR GCA 90 bp TGCTCGAGGGATTTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGTTGTACAGCTAATCCCCTCTaGGACGGAGTCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: CSRDFFRKSTVFSSVSCCTANPL*DGVSSS
Trigger: TGAAGAACTGACTCCGTCGCAGAGGGGATTAGCTGT...ACAACAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAAATCCCTCGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp ACACAGCAATCAGGATTCTTTGAAACCCACAGAACCTTCTCTCCATCTCTGAGTACAGCTAATCCCCTCTaGGACGGAGTCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TQQSGFFETHRTFSPSLSTANPL*DGVSSS
Trigger: TGAAGAACTGACTCCGTCGCAGAGGGGATTAGCTGT...ACTCAGAGATGGAGAGAAGGTTCTGTGGGTTTCAAAGAATCCTGATTGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp CGACATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCACTGCCAGGATGCCCATaGAGTTGCAGGTATAACTTA +
Preference number: 4 (lower is better)
Translates to: RHDYFPPLQCLGIRSVHSLPGCP*SCRYNL
Trigger: TAAGTTATACCTGCAACTTCATGGGCATCCTGGCAG...TGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp TCTCTCTTCCTTAAACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCAGTAATCTGACACACTaGGAGGTATCCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SLFLKQEALQRPQDWLLFSNLTH*EVSQSK
Trigger: TTTGCTTTGGGATACCTCTCAGTGTGTCAGATTACT...GAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAAGGAAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110942.11
ENSMUST00000222994.2
CDS-3UTR GCA 90 bp GACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCCAATCTAGTTCTGCTTTCCCATGCTaGTCGTCTTTTCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: DPQEHGMGGVISFHFQSSSAFPC*SSFPFS
Trigger: TGAAAATGGAAAAGACGAGCAGCATGGGAAAGCAGA...ACTAGATTGGAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp CGACATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAATTTGGAGATGGATCTaGTTTCCCATGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: RHDYFPPLQCLGIRSVHSIWRWI*FPMLLV
Trigger: GACGAGCAGCATGGGAAAGCAGATCCATCTCCAAAT...TGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp ATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAAATCATCATTGGGTGCTaGATGCTCTCCACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: MIIFHLFSALGYAVYIQQIIIGC*MLSTPA
Trigger: AGCAGGAGTGGAGAGCATGCAGCACCCAATGATGAT...TTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CAA 72 bp AAATGCTCATCGATGTTGTACTCCACGGGTAGCATGTaGGAGATGGTCAGGTGGAATAATAAGGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KCSSMLYSTGSM*EMVRWNNKESP
Trigger: TGGACTCTCCTTATTATTCCACCTGACCATCTCCAACATGCTACCCGTGGAGTACAACATCGATGAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
CDS-3UTR TCA 90 bp TTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGTTGTGTCCCATACAGTCTGCCAGGATGCCCATaGAGTTGCAGGTATAACTTA +
Preference number: 4 (lower is better)
Translates to: FFRKSTVFSSVSCCVPYSLPGCP*SCRYNL
Trigger: TAAGTTATACCTGCAACTTCATGGGCATCCTGGCAG...ACTGTATGGGACACAACAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp TGCTTTCCTTGTTCGGGCCTCCTTATCTTAGCTTCCCTCTTATTGTTTTGTTTTCATAGCACACCCTTTTaGGCCAAAGAGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: CFPCSGLLILASLLLFCFHSTPF*AKELSG
Trigger: TCCAGACAGCTCTTTGGCTCAAAAGGGTGTGCTATG...AAAACAAAACAATAAGAGGGAAGCTAAGATAAGGAGGCCCGAACAAGGAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp ATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAAATTTGGAGATGGATCTaGTTTCCCATGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: MIIFHLFSALGYAVYIQQIWRWI*FPMLLV
Trigger: GACGAGCAGCATGGGAAAGCAGATCCATCTCCAAAT...TTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp TTTATGCTCGAGGGATTTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGCTTCTCCGTAACTGCTaGATTTGGAGATGGATCTGC +
Preference number: 4 (lower is better)
Translates to: FMLEGFLQKVHSVLISKLLLRNC*IWRWIC
Trigger: GCAGATCCATCTCCAAATGCAGCAGTTACGGAGAAG...CAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAAATCCCTCGAGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp ATAAGGCGTGACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCAAACTAGTGATCTTCTaGGTAATGATCATCATTGGG +
Preference number: 4 (lower is better)
Translates to: IRRDPQEHGMGGVISFHFKLVIF*VMIIIG
Trigger: CCCAATGATGATCATTACGCAGAAGATCACTAGTTT...GAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTCACGCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp TTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCAAACGTTATTCATCGTaGAAAAACTGTTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: FSALGYAVYIQQQGTQMTKRYSS*KNCSVP
Trigger: TGGGACAGAACAGTTTTTCCACGATGAATAACGTTT...GGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp ATAAGGCGTGACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCAAACGTTATTCATCGTaGAAAAACTGTTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: IRRDPQEHGMGGVISFHFKRYSS*KNCSVP
Trigger: TGGGACAGAACAGTTTTTCCACGATGAATAACGTTT...GAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTCACGCCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp CGACATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAAACAAGGCAAAGAGCTaGCACACTACAAAGTTGACC +
Preference number: 4 (lower is better)
Translates to: RHDYFPPLQCLGIRSVHSNKAKS*HTTKLT
Trigger: GGTCAACTTTGTAGTGTGCCAGCTCTTTGCCTTGTT...TGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp CGACATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAATGCTCTGCCTTCAATaGAGGCAATGTAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RHDYFPPLQCLGIRSVHSMLCLQ*RQCSLC
Trigger: ACAAAGACTACATTGCCTTCATTGAAGGCAGAGCAT...TGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp TTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGTTGTGTCCCATACAGTAGACCCCATGCCAAATaGCAGAGAGAAAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: FFRKSTVFSSVSCCVPYSRPHAK*QRERMS
Trigger: AGACATTCTTTCTCTCTGCCATTTGGCATGGGGTCT...ACTGTATGGGACACAACAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp ATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAATGTCAGATAGTATCCTaGGTAGACCCCATGCCAAAT +
Preference number: 4 (lower is better)
Translates to: MIIFHLFSALGYAVYIQQCQIVS*VDPMPN
Trigger: ATTTGGCATGGGGTCTACCCAGGATACTATCTGACA...TTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
3UTR CAA 72 bp TTATTCATCGTGGAAAAACTGTTCTGTCCCAGAGGATaGTCCCTTTCGTCAAACTTTTTGGCCTGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LFIVEKLFCPRG*SLSSNFLACER
Trigger: TCTCTCACAGGCCAAAAAGTTTGACGAAAGGGACAATCCTCTGGGACAGAACAGTTTTTCCACGATGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
CDS-3UTR TCA 90 bp ATGTCTGGGTCAGTTATAGTGTGGAACTCTTTAAGAGTCAATGAGCTGAAACTTCTGCCAGGATGCCCATaGAGTTGCAGGTATAACTTA +
Preference number: 4 (lower is better)
Translates to: MSGSVIVWNSLRVNELKLLPGCP*SCRYNL
Trigger: TAAGTTATACCTGCAACTTCATGGGCATCCTGGCAG...AAGTTTCAGCTCATTGACTCTTAAAGAGTTCCACACTATAACTGACCCAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp CGACATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAGATCATCATTGGGCCTaGAAAATCAGCAGAATATTG +
Preference number: 4 (lower is better)
Translates to: RHDYFPPLQCLGIRSVHSDHHWA*KISRIL
Trigger: CAATATTCTGCTGATTTTTCAGGCCCAATGATGATC...TGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110942.11
CDS-3UTR GCA 90 bp ATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAATCTGCTTTCCCATGCTaGTCGTCTTTTCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: MIIFHLFSALGYAVYIQQSAFPC*SSFPFS
Trigger: TGAAAATGGAAAAGACGAGCAGCATGGGAAAGCAGA...TTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp CGACATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAGAACATTTTCCTGTGTaGTCGTTCTTCTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: RHDYFPPLQCLGIRSVHSEHFPV*SFFFET
Trigger: AGTCTCAAAGAAGAACGAGCACACAGGAAAATGTTC...TGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp AGACGACATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATGAACATTTTCCTGTGTaGTCGTTCTTCTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: RRHDYFPPLQCLGIRSVHEHFPV*SFFFET
Trigger: AGTCTCAAAGAAGAACGAGCACACAGGAAAATGTTC...ATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp ATACCATCCGGGAACAACATTTTAGGAAGATTTAAGGCAAGACATTCATTTGGACCACGGGTAGCATGTTaGAGATGGTCAGGTGGAATA +
Preference number: 4 (lower is better)
Translates to: IPSGNNILGRFKARHSFGPRVAC*RWSGGI
Trigger: TATTCCACCTGACCATCTCCAACATGCTACCCGTGG...TCCAAATGAATGTCTTGCCTTAAATCTTCCTAAAATGTTGTTCCCGGATGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR GCA 90 bp CACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCCAATCTAGTGTATAAACTAGTGATCTTCTaGGTAATGATCATCATTGGG +
Preference number: 4 (lower is better)
Translates to: HRNMAWEGLSLSISNLVYKLVIF*VMIIIG
Trigger: CCCAATGATGATCATTACGCAGAAGATCACTAGTTT...ATACACTAGATTGGAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp ACACAGCAATCAGGATTCTTTGAAACCCACAGAACCTTCTCTCCATCTCTGAGTTTTCGTCAAACTTTTTaGCCTGTGAGAGATGAACAT +
Preference number: 4 (lower is better)
Translates to: TQQSGFFETHRTFSPSLSFRQTF*PVRDEH
Trigger: ATGTTCATCTCTCACAGGCCAAAAAGTTTGACGAAA...ACTCAGAGATGGAGAGAAGGTTCTGTGGGTTTCAAAGAATCCTGATTGCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp TTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGTTGTGTCCCATACAGTTTTCGTCAAACTTTTTaGCCTGTGAGAGATGAACAT +
Preference number: 4 (lower is better)
Translates to: FFRKSTVFSSVSCCVPYSFRQTF*PVRDEH
Trigger: ATGTTCATCTCTCACAGGCCAAAAAGTTTGACGAAA...ACTGTATGGGACACAACAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR TCA 90 bp ATACCATCCGGGAACAACATTTTAGGAAGATTTAAGGCAAGACATTCATTTGGAATGCTCTGCCTTCAATaGAGGCAATGTAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: IPSGNNILGRFKARHSFGMLCLQ*RQCSLC
Trigger: ACAAAGACTACATTGCCTTCATTGAAGGCAGAGCAT...TCCAAATGAATGTCTTGCCTTAAATCTTCCTAAAATGTTGTTCCCGGATGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
3UTR CAA 72 bp GACAAAATTTCCCCAATCAATGACCTATGGAGCTTCTaGTCAGTTCTTCACTGGAGTTTGCATTGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: DKISPINDLWSF*SVLHWSLHCVK
Trigger: TTTAACACAATGCAAACTCCAGTGAAGAACTGACAAGAAGCTCCATAGGTCATTGATTGGGGAAATTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
3UTR CAA 72 bp TTTGAAGGGTTATTTATAGAACAGACAGGCTGTCCCTaGCTTTATAAAAATGGCATTAAGAGTTACCACCAG +
Preference number: 4 (lower is better)
Translates to: FEGLFIEQTGCP*LYKNGIKSYHQ
Trigger: CTGGTGGTAACTCTTAATGCCATTTTTATAAAGCAAGGGACAGCCTGTCTGTTCTATAAATAACCCTTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
CDS-3UTR CCA 90 bp ATACCATCCGGGAACAACATTTTAGGAAGATTTAAGGCAAGACATTCATTTGGATTTCGTCAAACTTTTTaGCCTGTGAGAGATGAACAT +
Preference number: 4 (lower is better)
Translates to: IPSGNNILGRFKARHSFGFRQTF*PVRDEH
Trigger: ATGTTCATCTCTCACAGGCCAAAAAGTTTGACGAAA...TCCAAATGAATGTCTTGCCTTAAATCTTCCTAAAATGTTGTTCCCGGATGGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp CTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACGGCAGTTGCACGGCGTaGCTGAGGGGCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LQCLGIRSVHSATGYTDDGSCTA*LRGCSR
Trigger: CCTGCTGCAGCCCCTCAGCAACGCCGTGCAACTGCC...GTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
CDS-3UTR CAA 90 bp TTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCGGCAGTTGCACGGCGTaGCTGAGGGGCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: FSALGYAVYIQQQGTQMTGSCTA*LRGCSR
Trigger: CCTGCTGCAGCCCCTCAGCAACGCCGTGCAACTGCC...GGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTATCCCAAGGCACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
CDS-3UTR CAA 90 bp ATAAGGCGTGACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCCTGATCGATGGGCAGTaGCACGGCGTTGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: IRRDPQEHGMGGVISFHFLIDGQ*HGVAEG
Trigger: CCCCTCAGCAACGCCGTGCAACTGCCCATCGATCAG...GAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTCACGCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
CDS-3UTR CAA 90 bp GGAAATGCTCATCGATGTTGTACTCCACGGGTAGCATGTTGGAGATGGTCAGGTCTGATCGATGGGCAGTaGCACGGCGTTGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: GNAHRCCTPRVACWRWSGLIDGQ*HGVAEG
Trigger: CCCCTCAGCAACGCCGTGCAACTGCCCATCGATCAG...ACCTGACCATCTCCAACATGCTACCCGTGGAGTACAACATCGATGAGCATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222994.2
CDS-3UTR CAA 90 bp TTTATGCTCGAGGGATTTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGGGCAGTTGCACGGCGTaGCTGAGGGGCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: FMLEGFLQKVHSVLISKLGSCTA*LRGCSR
Trigger: CCTGCTGCAGCCCCTCAGCAACGCCGTGCAACTGCC...CAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAAATCCCTCGAGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000221952.2
ENSMUST00000222994.2
CDS-3UTR CAA 90 bp GTGTCCCATACAGTTACACTAATCTCGGACACAGAAGTGGGAAGCCCTCTGCCATCCACGGGTAGCATGTaGGAGATGGTCAGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: VSHTVTLISDTEVGSPLPSTGSM*EMVRWN
Trigger: ATTCCACCTGACCATCTCCAACATGCTACCCGTGGA...TGGCAGAGGGCTTCCCACTTCTGTGTCCGAGATTAGTGTAACTGTATGGGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp GTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCAGATGCTGAGGTCCCACGACGCAGTGGCTaGGAAATGCTCATCGATGTT +
Preference number: 5 (lower is better)
Translates to: VYIQQQGTQMTLRADAEVPRRSG*EMLIDV
Trigger: AACATCGATGAGCATTTCCAAGCCACTGCGTCGTGG...GACCTCAGCATCTGCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp TGTGTCCCATACAGTTACACTAATCTCGGACACAGAAGTGGGAAGCCCTCTGCCCCACGACGCAGTGGCTaGGAAATGCTCATCGATGTT +
Preference number: 5 (lower is better)
Translates to: CVPYSYTNLGHRSGKPSAPRRSG*EMLIDV
Trigger: AACATCGATGAGCATTTCCAAGCCACTGCGTCGTGG...GGCAGAGGGCTTCCCACTTCTGTGTCCGAGATTAGTGTAACTGTATGGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp TACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCAGATGCTCGAGCCACTCCATTCTaGTCGTATCCTCTGAAACCG +
Preference number: 5 (lower is better)
Translates to: YAVYIQQQGTQMTLRADARATPF*SYPLKP
Trigger: CGGTTTCAGAGGATACGACAAGAATGGAGTGGCTCG...AGCATCTGCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp ATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACTGATCGATGGGCAGTaGCACGGCGTTGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: MIIFHLFSALGYAVYIQQLIDGQ*HGVAEG
Trigger: CCCCTCAGCAACGCCGTGCAACTGCCCATCGATCAG...TTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110942.11
ENSMUST00000221952.2
ENSMUST00000222994.2
CDS-3UTR CAA 90 bp TCCGAGGTGCTTTCCTTGTTCGGGCCTCCTTATCTTAGCTTCCCTCTTATTGTTTCCACGGGTAGCATGTaGGAGATGGTCAGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: SEVLSLFGPPYLSFPLIVSTGSM*EMVRWN
Trigger: ATTCCACCTGACCATCTCCAACATGCTACCCGTGGA...AACAATAAGAGGGAAGCTAAGATAAGGAGGCCCGAACAAGGAAAGCACCTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp TGTTGTGTCCCATACAGTTACACTAATCTCGGACACAGAAGTGGGAAGCCCTCTCCACGACGCAGTGGCTaGGAAATGCTCATCGATGTT +
Preference number: 5 (lower is better)
Translates to: CCVPYSYTNLGHRSGKPSPRRSG*EMLIDV
Trigger: AACATCGATGAGCATTTCCAAGCCACTGCGTCGTGG...AGAGGGCTTCCCACTTCTGTGTCCGAGATTAGTGTAACTGTATGGGACACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp AGGCGTGACCCACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCCAACAACTGTGTAACTTATaGTTATCTGGGTGGCCACCC +
Preference number: 5 (lower is better)
Translates to: RRDPQEHGMGGVISFHFQQLCNL*LSGWPP
Trigger: GGGTGGCCACCCAGATAACAATAAGTTACACAGTTG...TTGGAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTGGGTCACGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp CATCAGTCAAGTTGGAGTGCTGTGTTATGGGCCAGGAGGAACAGTGATCAGCTGCAACTGTGTAACTTATaGTTATCTGGGTGGCCACCC +
Preference number: 5 (lower is better)
Translates to: HQSSWSAVLWARRNSDQLQLCNL*LSGWPP
Trigger: GGGTGGCCACCCAGATAACAATAAGTTACACAGTTG...CAGCTGATCACTGTTCCTCCTGGCCCATAACACAGCACTCCAACTTGACTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp TACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCAGATGCTAAATGCTCATCGATGTaGTACTCCACGGGTAGCATG +
Preference number: 5 (lower is better)
Translates to: YAVYIQQQGTQMTLRADAKCSSM*YSTGSM
Trigger: CATGCTACCCGTGGAGTACAACATCGATGAGCATTT...AGCATCTGCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp CACAGGAACATGGCATGGGAGGGGTTATCTCTTTCCATTTCCAATCTAGTGTATTCCACGGGTAGCATGTaGGAGATGGTCAGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: HRNMAWEGLSLSISNLVYSTGSM*EMVRWN
Trigger: ATTCCACCTGACCATCTCCAACATGCTACCCGTGGA...ATACACTAGATTGGAAATGGAAAGAGATAACCCCTCCCATGCCATGTTCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp TGCTCGAGGGATTTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGTTGTCGAGCCACTCCATTCTaGTCGTATCCTCTGAAACCG +
Preference number: 5 (lower is better)
Translates to: CSRDFFRKSTVFSSVSCCRATPF*SYPLKP
Trigger: CGGTTTCAGAGGATACGACAAGAATGGAGTGGCTCG...ACAACAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAAATCCCTCGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp TACGCAGTGTACATTCAGCAACAGGGTACACAGATGACCTTGAGGGCAGATGCTTGTGCTCGTTCTTCTTaGAGACTTTTTCACAGGCAG +
Preference number: 5 (lower is better)
Translates to: YAVYIQQQGTQMTLRADACARSS*RLFHRQ
Trigger: CTGCCTGTGAAAAAGTCTCAAAGAAGAACGAGCACA...AGCATCTGCCCTCAAGGTCATCTGTGTACCCTGTTGCTGAATGTACACTGCGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp ATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAGCAACGAGCCACTCCATTCTaGTCGTATCCTCTGAAACCG +
Preference number: 5 (lower is better)
Translates to: MIIFHLFSALGYAVYIQQRATPF*SYPLKP
Trigger: CGGTTTCAGAGGATACGACAAGAATGGAGTGGCTCG...TTGCTGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp TCTCTCTTCCTTAAACAAGAGGCTCTGCAAAGGCCTCAAGACTGGCTTCTGTTCTGTGCTCGTTCTTCTTaGAGACTTTTTCACAGGCAG +
Preference number: 5 (lower is better)
Translates to: SLFLKQEALQRPQDWLLFCARSS*RLFHRQ
Trigger: CTGCCTGTGAAAAAGTCTCAAAGAAGAACGAGCACA...GAACAGAAGCCAGTCTTGAGGCCTTTGCAGAGCCTCTTGTTTAAGGAAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp CGACATGATTATTTTCCACCTCTTCAGTGCCTTGGGATACGCAGTGTACATTCAAAATGCTCATCGATGTaGTACTCCACGGGTAGCATG +
Preference number: 5 (lower is better)
Translates to: RHDYFPPLQCLGIRSVHSKCSSM*YSTGSM
Trigger: CATGCTACCCGTGGAGTACAACATCGATGAGCATTT...TGAATGTACACTGCGTATCCCAAGGCACTGAAGAGGTGGAAAATAATCATGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078902.8
ENSMUST00000110942.11
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp TTCTTCAGAAAGTCCACAGTGTTCTCATCAGTAAGCTGTTGTGTCCCATACAGTCAACTGTGTAACTTATaGTTATCTGGGTGGCCACCC +
Preference number: 5 (lower is better)
Translates to: FFRKSTVFSSVSCCVPYSQLCNL*LSGWPP
Trigger: GGGTGGCCACCCAGATAACAATAAGTTACACAGTTG...ACTGTATGGGACACAACAGCTTACTGATGAGAACACTGTGGACTTTCTGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS-3UTR CAA 90 bp TGCTTTCCTTGTTCGGGCCTCCTTATCTTAGCTTCCCTCTTATTGTTTTGTTTTTGTGCTCGTTCTTCTTaGAGACTTTTTCACAGGCAG +
Preference number: 5 (lower is better)
Translates to: CFPCSGLLILASLLLFCFCARSS*RLFHRQ
Trigger: CTGCCTGTGAAAAAGTCTCAAAGAAGAACGAGCACA...AAAACAAAACAATAAGAGGGAAGCTAAGATAAGGAGGCCCGAACAAGGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000078902.8
ENSMUST00000221952.2
CDS CAA 90 bp AACCAAACGGCTGCTAACAAGGCAAAGAGCTGGCACACTACAAAGTaGACCTCACCCGCCGCCCACCTGGGCCTGATCGGCCGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: NQTAANKAKSWHTTK*TSPAAHLGLIGRAG
Trigger: CCCAGCGCGGCCGATCAGGCCCAGGTGGGCGGCGGGTGAGGTCAACTTTGTAGTGTGCCAGCTCTTTGCCTTGTTAGCAGCCGTTTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222198.2
CDS CCA 72 bp AGCCAAACTAGTGATCTTCTGCGTAATGATCATCATTaGGTGCTGCATGCTCTCCACTCCTGCTATGATCAT +
Preference number: 6 (lower is better)
Translates to: SQTSDLLRNDHH*VLHALHSCYDH
Trigger: ATGATCATAGCAGGAGTGGAGAGCATGCAGCACCCAATGATGATCATTACGCAGAAGATCACTAGTTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221952.2