Pregenerated sensors for MBOAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038732Ensembl transcript IDs: ENSMUST00000047311.16
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATTTCAAAACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTaGCGGAGGCAACGGCTGGAGTCATGCTTCCAGATTTCAGTAGGT | + |
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Preference number: 1 (lower is better) Translates to: DFKTPDKSSQQTPPK*RRQRLESCFQISVG Trigger: ACCTACTGAAATCTGGAAGCATGACTCCAGCCGTTGCCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGTTTTGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR CAA 90 bp | AGGGAGCCTCTGCATGCTGAATGCAGCTATTTCTTGAAAAGACATTaGGCCGCCTTTGGACGGTGTGCTGGTTGGTATCCGGGTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: REPLHAECSYFLKRH*AAFGRCAGWYPGAF Trigger: GAAGGCACCCGGATACCAACCAGCACACCGTCCAAAGGCGGCCAAATGTCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR-3UTR CCA 90 bp | GTGATCATCGACACTTCCTTGATATGCAGAGACAAAAGGGAGCCTCTGCATGCTGAAGAGCCTACCCAGTaGCCTCTTGTCTATGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VIIDTSLICRDKREPLHAEEPTQ*PLVYAV Trigger: CACAGCATAGACAAGAGGCCACTGGGTAGGCTCTTC...AGCATGCAGAGGCTCCCTTTTGTCTCTGCATATCAAGGAAGTGTCGATGATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR-3UTR GCA 90 bp | GTGATCATCGACACTTCCTTGATATGCAGAGACAAAAGGGAGCCTCTGCATGCTCACAGCCTACTAAGTTaGATATCCCAGGGTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VIIDTSLICRDKREPLHAHSLLS*ISQGLE Trigger: CTCCAGACCCTGGGATATGCAACTTAGTAGGCTGTG...AGCATGCAGAGGCTCCCTTTTGTCTCTGCATATCAAGGAAGTGTCGATGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR-3UTR TCA 90 bp | GAGCCTCTGCATGCTGAATGCAGCTATTTCTTGAAAAGACATTTGGCCGCCTTTTGGTACATTCCTGGCTaGGTTGGGGTGATAATGCAG | + |
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Preference number: 2 (lower is better) Translates to: EPLHAECSYFLKRHLAAFWYIPG*VGVIMQ Trigger: CTGCATTATCACCCCAACTCAGCCAGGAATGTACCA...AAAGGCGGCCAAATGTCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAGACAAAAGGGAGCCTCTGCATGCTGAATGCAGCTATTTCTTGAAAAGAGCATATCCCAGGGTCTaGAGTTGCCAAGAGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: CRDKREPLHAECSYFLKRAYPRV*SCQEEK Trigger: TTTTTCCTCTTGGCAACTCCAGACCCTGGGATATGC...TCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTCCCTTTTGTCTCTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR-3UTR CCA 90 bp | AATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACATTCCAAGCACGGGAAATaGAAACCAGTAGCCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: NHLFRTNFHLSGHLIEAHSKHGK*KPVAPT Trigger: AGTGGGGGCTACTGGTTTCCATTTCCCGTGCTTGGA...ATGTGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR-3UTR GCA 90 bp | AATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACATGTGGCCTCTTGTCTATaGTGTGTTTCTGAAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: NHLFRTNFHLSGHLIEAHVASCL*CVSERP Trigger: GGGCCTTTCAGAAACACAGCATAGACAAGAGGCCAC...ATGTGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR-3UTR TCA 90 bp | AAAAATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCAAATGCAGCTATTTCTTaGAAAGACATTTGGCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: KNHLFRTNFHLSGHLIEANAAIS*KDIWPP Trigger: AGGCGGCCAAATGTCTTTTCAAGAAATAGCTGCATT...TGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR-3UTR CCA 90 bp | AAAAATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCATCGGATGTCCAATCTTaGCTCAATTCAGAAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: KNHLFRTNFHLSGHLIEASDVQS*LNSEGK Trigger: TTTTCCTTCTGAATTGAGCCAAGATTGGACATCCGA...TGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR CCA 72 bp | ATGGAAACCAGTAGCCCCCACTCTCTCCCCAACTCCTaGGGCACGCAGGCAGCTTTCGGATGTCCAATCTTG | + |
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Preference number: 3 (lower is better) Translates to: METSSPHSLPNS*GTQAAFGCPIL Trigger: CAAGATTGGACATCCGAAAGCTGCCTGCGTGCCCCAGGAGTTGGGGAGAGAGTGGGGGCTACTGGTTTCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR GCA 72 bp | GGCCGCCTTTGGACGGTGTGCTGGTTGGTATCCGGGTaGCTTCTCAGGGTCAATAGAAGTCAATCAGATCCA | + |
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Preference number: 3 (lower is better) Translates to: GRLWTVCWLVSG*LLRVNRSQSDP Trigger: TGGATCTGATTGACTTCTATTGACCCTGAGAAGGCACCCGGATACCAACCAGCACACCGTCCAAAGGCGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR GCA 72 bp | ACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTaGCGGAGGCAACGGCTGGAGTCATGCTTCCAGATT | + |
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Preference number: 3 (lower is better) Translates to: TPDKSSQQTPPK*RRQRLESCFQI Trigger: AATCTGGAAGCATGACTCCAGCCGTTGCCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR CCA 72 bp | ATGCAGCTATTTCTTGAAAAGACATTTGGCCGCCTTTaGACGGTGTGCTGGTTGGTATCCGGGTGCCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: MQLFLEKTFGRL*TVCWLVSGCLL Trigger: GAGAAGGCACCCGGATACCAACCAGCACACCGTCCAAAGGCGGCCAAATGTCTTTTCAAGAAATAGCTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR TCA 72 bp | AAAGGGAGCCTCTGCATGCTGAATGCAGCTATTTCTTaGAAAGACATTTGGCCGCCTTTGGACGGTGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: KGSLCMLNAAIS*KDIWPPLDGVL Trigger: CAGCACACCGTCCAAAGGCGGCCAAATGTCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTCCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR GCA 72 bp | TACACGTTGGCCGTGATCATCGACACTTCCTTGATATaGAGAGACAAAAGGGAGCCTCTGCATGCTGAATGC | + |
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Preference number: 3 (lower is better) Translates to: YTLAVIIDTSLI*RDKREPLHAEC Trigger: GCATTCAGCATGCAGAGGCTCCCTTTTGTCTCTGCATATCAAGGAAGTGTCGATGATCACGGCCAACGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR TCA 72 bp | CTTGATATGCAGAGACAAAAGGGAGCCTCTGCATGCTaGATGCAGCTATTTCTTGAAAAGACATTTGGCCGC | + |
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Preference number: 3 (lower is better) Translates to: LDMQRQKGASAC*MQLFLEKTFGR Trigger: GCGGCCAAATGTCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTCCCTTTTGTCTCTGCATATCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR GCA 72 bp | GATTTTAGAAGAGCCTACCCAGTGGCCTCTTGTCTATaGTGTGTTTCTGAAAGGCCCTGTAAAGTATGCAGA | + |
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Preference number: 3 (lower is better) Translates to: DFRRAYPVASCL*CVSERPCKVCR Trigger: TCTGCATACTTTACAGGGCCTTTCAGAAACACAGCATAGACAAGAGGCCACTGGGTAGGCTCTTCTAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR GCA 72 bp | TTTGAGCATAAGAGTTGTGTCCACAGCCTACTAAGTTaGATATCCCAGGGTCTGGAGTTGCCAAGAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: FEHKSCVHSLLS*ISQGLELPRGK Trigger: TTTTCCTCTTGGCAACTCCAGACCCTGGGATATGCAACTTAGTAGGCTGTGGACACAACTCTTATGCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR GCA 72 bp | ATATGCAGAGACAAAAGGGAGCCTCTGCATGCTGAATaGAGCTATTTCTTGAAAAGACATTTGGCCGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: ICRDKREPLHAE*SYFLKRHLAAF Trigger: AAAGGCGGCCAAATGTCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTCCCTTTTGTCTCTGCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR-3UTR CAA 90 bp | AAAAATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACAGAGTAGAGCACTGTaGTTCCCCTGCAGCTTTCCG | + |
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Preference number: 3 (lower is better) Translates to: KNHLFRTNFHLSGHLIEAQSRAL*FPCSFP Trigger: CGGAAAGCTGCAGGGGAACAACAGTGCTCTACTCTG...TGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR TCA 72 bp | ATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTaGTTGAGGCACATCATTGAAGCGCATATTTTATTA | + |
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Preference number: 3 (lower is better) Translates to: ICSEQIFTFQAI*LRHIIEAHILL Trigger: TAATAAAATATGCGCTTCAATGATGTGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | GGGTCAATAGAAGTCAATCAGATCCAAGCACGGGAAATGGAAACCAGTAGCCCCCAGACAGGAGGAAGGTaGGCACTGTGGGGTACCAGG | + |
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Preference number: 4 (lower is better) Translates to: GSIEVNQIQAREMETSSPQTGGR*ALWGTR Trigger: CCTGGTACCCCACAGTGCTCACCTTCCTCCTGTCTG...GGGGCTACTGGTTTCCATTTCCCGTGCTTGGATCTGATTGACTTCTATTGACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CCA 90 bp | GAGCCTCTGCATGCTGAATGCAGCTATTTCTTGAAAAGACATTTGGCCGCCTTTGCGGGTGCAGGCAGGTaGAGCCGGTGGTACGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: EPLHAECSYFLKRHLAAFAGAGR*SRWYGK Trigger: CTTACCGTACCACCGGCTCCACCTGCCTGCACCCGC...AAAGGCGGCCAAATGTCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | GTGATCATCGACACTTCCTTGATATGCAGAGACAAAAGGGAGCCTCTGCATGCTAGACAGCCAACTGAGTaGCAGCCCAGGTCACCACGT | + |
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Preference number: 4 (lower is better) Translates to: VIIDTSLICRDKREPLHARQPTE*QPRSPR Trigger: ACGTGGTGACCTGGGCTGTCACTCAGTTGGCTGTCT...AGCATGCAGAGGCTCCCTTTTGTCTCTGCATATCAAGGAAGTGTCGATGATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CCA 90 bp | GATTTCAAAACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTGCCGGAGGGGCTCTGGCAAACTCTaGAAACCCCTTTGCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: DFKTPDKSSQQTPPKCRRGSGKL*KPLCVQ Trigger: CTGGACGCAAAGGGGTTTCCAGAGTTTGCCAGAGCC...CCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGTTTTGAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CCA 90 bp | GATTTCAAAACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTGCCGGAGGGTATCACAGCTCCCATaGGAGAAGGCTCTGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: DFKTPDKSSQQTPPKCRRVSQLP*EKALAN Trigger: GTTTGCCAGAGCCTTCTCCCATGGGAGCTGTGATAC...CCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGTTTTGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR CAA 72 bp | ACATGTAAACATCTCCTCCGAGTCACTGGAGAACCCTaGAGCCTGTCCGTTATGTCTTCCCAATGTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: TCKHLLRVTGEP*SLSVMSSQCPA Trigger: TGCGGGACATTGGGAAGACATAACGGACAGGCTCAAGGGTTCTCCAGTGACTCGGAGGAGATGTTTACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | GTGATCATCGACACTTCCTTGATATGCAGAGACAAAAGGGAGCCTCTGCATGCTCTCCGAGACTGCCTTTaGGGCTGGTGTGGTTTGATT | + |
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Preference number: 4 (lower is better) Translates to: VIIDTSLICRDKREPLHALRDCL*GWCGLI Trigger: AATCAAACCACACCAGCCTCAAAGGCAGTCTCGGAG...AGCATGCAGAGGCTCCCTTTTGTCTCTGCATATCAAGGAAGTGTCGATGATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CCA 90 bp | AATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACATGGGATGCCCAGGAGCTaGCTGAGCGGGTGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NHLFRTNFHLSGHLIEAHGMPRS*LSGCRQ Trigger: CTGCCTGCACCCGCTCAGCCAGCTCCTGGGCATCCC...ATGTGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR CAA 72 bp | AGTGTCTACACGTTGGCCGTGATCATCGACACTTCCTaGATATGCAGAGACAAAAGGGAGCCTCTGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: SVYTLAVIIDTS*ICRDKREPLHA Trigger: AGCATGCAGAGGCTCCCTTTTGTCTCTGCATATCAAGGAAGTGTCGATGATCACGGCCAACGTGTAGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | GATTTCAAAACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTGCCGGAGGGAGGCTGGTGTGGTTTaGTTGGCAGAAAGAGGATTA | + |
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Preference number: 4 (lower is better) Translates to: DFKTPDKSSQQTPPKCRREAGVV*LAERGL Trigger: TAATCCTCTTTCTGCCAATCAAACCACACCAGCCTC...CCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGTTTTGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR GCA 90 bp | CTTCACAATCTCTTTCCTCCAAGGGCTTTTGAGCATAAGAGTTGTGTCCACAGCCATGACGAAAGGCGCTaGCGTGTAAGAGACAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LHNLFPPRAFEHKSCVHSHDERR*RVRDSQ Trigger: TTGGCTGTCTCTTACACGGCAGCGCCTTTCGTCATG...GCTGTGGACACAACTCTTATGCTCAAAAGCCCTTGGAGGAAAGAGATTGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| 3UTR CAA 72 bp | AAAAGGGAGCCTCTGCATGCTGAATGCAGCTATTTCTaGAAAAGACATTTGGCCGCCTTTGGACGGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: KREPLHAECSYF*KRHLAAFGRCA Trigger: AGCACACCGTCCAAAGGCGGCCAAATGTCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTCCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | GTGATCATCGACACTTCCTTGATATGCAGAGACAAAAGGGAGCCTCTGCATGCTGCTTTGCGGCTTGCATaGCGACATATAAGTACCAGA | + |
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Preference number: 4 (lower is better) Translates to: VIIDTSLICRDKREPLHAALRLA*RHISTR Trigger: TCTGGTACTTATATGTCGTCATGCAAGCCGCAAAGC...AGCATGCAGAGGCTCCCTTTTGTCTCTGCATATCAAGGAAGTGTCGATGATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | GATTTCAAAACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTGCCGGAGGCTCCAGTTAGGAATGTaGAGTAGTATCCAGGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: DFKTPDKSSQQTPPKCRRLQLGM*SSIQGR Trigger: TCTACCCTGGATACTACTTCACATTCCTAACTGGAG...CCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGTTTTGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR GCA 90 bp | GATTTCAAAACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTGCCGGAGGTTGGGCTTTGCGGCTTaGATGACGACATATAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: DFKTPDKSSQQTPPKCRRLGFAA*MTTYKY Trigger: GTACTTATATGTCGTCATGCAAGCCGCAAAGCCCAA...CCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGTTTTGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | TGCAGAGACAAAAGGGAGCCTCTGCATGCTGAATGCAGCTATTTCTTGAAAAGAAACGTCGTGATCTTCTaGGTGACAATCATCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: CRDKREPLHAECSYFLKRNVVIF*VTIIRG Trigger: GCCCCTGATGATTGTCACTCAGAAGATCACGACGTT...TCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTCCCTTTTGTCTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CCA 90 bp | GGGTCAATAGAAGTCAATCAGATCCAAGCACGGGAAATGGAAACCAGTAGCCCCGACGACTCAGAAAGTTaGCCTTATGTACAAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: GSIEVNQIQAREMETSSPDDSES*PYVQTS Trigger: ACTGGTTTGTACATAAGGCCAACTTTCTGAGTCGTC...GGGGCTACTGGTTTCCATTTCCCGTGCTTGGATCTGATTGACTTCTATTGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CCA 90 bp | GATTTCAAAACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTGCCGGAGGCTGGTGTGGTTTGATTaGCAGAAAGAGGATTATCAG | + |
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Preference number: 4 (lower is better) Translates to: DFKTPDKSSQQTPPKCRRLVWFD*QKEDYQ Trigger: CTGATAATCCTCTTTCTGCCAATCAAACCACACCAG...CCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGTTTTGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | AAAAATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCAGCCACAAAGTTAACCTaGTCCAGCGGGATGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KNHLFRTNFHLSGHLIEAATKLT*SSGMPR Trigger: CCTGGGCATCCCGCTGGATCAGGTTAACTTTGTGGC...TGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | GAGCCTCTGCATGCTGAATGCAGCTATTTCTTGAAAAGACATTTGGCCGCCTTTGATGTAAGTAGATTCTaGACCAGAAAGCAGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: EPLHAECSYFLKRHLAAFDVSRF*TRKQQT Trigger: TGTCTGCTGCTTTCTGGTTCAGAATCTACTTACATC...AAAGGCGGCCAAATGTCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR GCA 90 bp | CTTCACAATCTCTTTCCTCCAAGGGCTTTTGAGCATAAGAGTTGTGTCCACAGCACACAACAAAATAGATaGCCAAAATGGTGGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LHNLFPPRAFEHKSCVHSTQQNR*PKWWPR Trigger: CCTTGGCCACCATTTTGGGCATCTATTTTGTTGTGT...GCTGTGGACACAACTCTTATGCTCAAAAGCCCTTGGAGGAAAGAGATTGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | TGCAGAGACAAAAGGGAGCCTCTGCATGCTGAATGCAGCTATTTCTTGAAAAGATTTCCAAGTACATTTTaGAACTCGTGGCAGTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: CRDKREPLHAECSYFLKRFPSTF*NSWQSQ Trigger: TTGAGACTGCCACGAGTTTCAAAATGTACTTGGAAA...TCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTCCCTTTTGTCTCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CCA 90 bp | AAAAATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACATGGGAGAAGGCTCTaGCAAACTCTGGAAACCCCT | + |
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Preference number: 4 (lower is better) Translates to: KNHLFRTNFHLSGHLIEAHGRRL*QTLETP Trigger: AGGGGTTTCCAGAGTTTGCCAGAGCCTTCTCCCATG...TGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | AAAAATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACGACCCAATCCATCATaGACTTGGAAAGCCAACGTC | + |
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Preference number: 4 (lower is better) Translates to: KNHLFRTNFHLSGHLIEARPNPS*TWKANV Trigger: GACGTTGGCTTTCCAAGTTCATGATGGATTGGGTCG...TGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR GCA 90 bp | AAAAATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCAACAGCAAGTCGGTGTTaGTCAGCAGAAAGGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KNHLFRTNFHLSGHLIEATASRC*SAERSS Trigger: TGAAGACCTTTCTGCTGAGCAACACCGACTTGCTGT...TGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CCA 90 bp | AATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACATCAATCTTTCGAGCTTTaGAAGAGAGGAAGTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHLFRTNFHLSGHLIEAHQSFEL*KRGSGV Trigger: GACACCACTTCCTCTCTTCCAAAGCTCGAAAGATTG...ATGTGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CCA 90 bp | AAAAATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACCTTTGAGGCTGGTGTaGTTTGATTGGCAGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNHLFRTNFHLSGHLIEAPLRLV*FDWQKE Trigger: CTCTTTCTGCCAATCAAACCACACCAGCCTCAAAGG...TGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR TCA 90 bp | AATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACATAGCCACGTAGATGTCTaGATATTCCAGTTTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NHLFRTNFHLSGHLIEAHSHVDV*IFQFSK Trigger: CTTGGAAAACTGGAATATTCAGACATCTACGTGGCT...ATGTGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR GCA 90 bp | AAAAATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCAGTAATACTTGGGCTTTaGGGCTTGCATGACGACATA | + |
|
Preference number: 4 (lower is better) Translates to: KNHLFRTNFHLSGHLIEAVILGL*GLHDDI Trigger: TATGTCGTCATGCAAGCCGCAAAGCCCAAGTATTAC...TGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR GCA 90 bp | AATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACATAATATTGGATACACTTaGAGTGACCATGACCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: NHLFRTNFHLSGHLIEAHNIGYT*SDHDPI Trigger: TATGGGGTCATGGTCACTGCAAGTGTATCCAATATT...ATGTGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS TCA 90 bp | AGTATCCAGGGTAGACGCCGTGCCACAGAGCAGACAGGAGGAAGGTaGGCACTGTGGGGTACCAGGGAACCCGCTCATAGCACACACATT | + |
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Preference number: 5 (lower is better) Translates to: SIQGRRRATEQTGGR*ALWGTREPAHSTHI Trigger: AATGTGTGTGCTATGAGCGGGTTCCCTGGTACCCCACAGTGCTCACCTTCCTCCTGTCTGCTCTGTGGCACGGCGTCTACCCTGGATACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS TCA 90 bp | TGTGCCGGACCTCAGGGCTGGCTTTACCAGGATGTAAGTAGATTCTaGACCAGAAAGCAGCAGACAAGGCAAAGAGCTGGCAAGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: CAGPQGWLYQDVSRF*TRKQQTRQRAGKPQ Trigger: TTGTGGCTTGCCAGCTCTTTGCCTTGTCTGCTGCTTTCTGGTTCAGAATCTACTTACATCCTGGTAAAGCCAGCCCTGAGGTCCGGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CCA 90 bp | GGTCACACACAACTTCTGTATCACAGCTCCCATGGGAGAAGGCTCTaGCAAACTCTGGAAACCCCTTTGCGTCCAGTTCACTTCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GHTQLLYHSSHGRRL*QTLETPLRPVHFQQ Trigger: TTGCTGGAAGTGAACTGGACGCAAAGGGGTTTCCAGAGTTTGCCAGAGCCTTCTCCCATGGGAGCTGTGATACAGAAGTTGTGTGTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS GCA 90 bp | ACAGCTCCCATGGGAGAAGGCTCTGGCAAACTCTGGAAACCCCTTTaGGTCCAGTTCACTTCCAGCAACTTCATGTGTATATGTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TAPMGEGSGKLWKPL*VQFTSSNFMCICLP Trigger: AGGGAGACATATACACATGAAGTTGCTGGAAGTGAACTGGACGCAAAGGGGTTTCCAGAGTTTGCCAGAGCCTTCTCCCATGGGAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CAA 90 bp | GATTTCAAAACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTGCCGGAGGGTGACGGGAAAGGACTaGGAGAGCGTCAAAAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: DFKTPDKSSQQTPPKCRRVTGKD*ESVKNN Trigger: GTTGTTTTTGACGCTCTCCAAGTCCTTTCCCGTCAC...CCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGTTTTGAAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CAA 90 bp | CTTCACAATCTCTTTCCTCCAAGGGCTTTTGAGCATAAGAGTTGTGTCCACAGCCACAGCAAGTCGGTGTaGCTCAGCAGAAAGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHNLFPPRAFEHKSCVHSHSKSV*LSRKVF Trigger: GAAGACCTTTCTGCTGAGCAACACCGACTTGCTGTG...GCTGTGGACACAACTCTTATGCTCAAAAGCCCTTGGAGGAAAGAGATTGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CAA 90 bp | GATTTCAAAACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTGCCGGAGGGCAATCTTTCGAGCTTaGGAAGAGAGGAAGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DFKTPDKSSQQTPPKCRRAIFRA*EERKWC Trigger: ACACCACTTCCTCTCTTCCAAAGCTCGAAAGATTGC...CCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGTTTTGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS TCA 90 bp | CAGTCTGCCTTCTTCTTTACAGAATTTGGACTCCGAGACTGCCTTTaGGGCTGGTGTGGTTTGATTGGCAGAAAGAGGATTATCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSAFFFTEFGLRDCL*GWCGLIGRKRIISR Trigger: TCTGCTGATAATCCTCTTTCTGCCAATCAAACCACACCAGCCTCAAAGGCAGTCTCGGAGTCCAAATTCTGTAAAGAAGAAGGCAGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CAA 90 bp | GAGCCTCTGCATGCTGAATGCAGCTATTTCTTGAAAAGACATTTGGCCGCCTTTCAATCCATCATGAACTaGGAAAGCCAACGTCGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EPLHAECSYFLKRHLAAFQSIMN*ESQRRD Trigger: ATCACGACGTTGGCTTTCCAAGTTCATGATGGATTG...AAAGGCGGCCAAATGTCTTTTCAAGAAATAGCTGCATTCAGCATGCAGAGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CAA 90 bp | GATTTCAAAACTCCAGACAAGTCATCTCAGCAGACACCTCCTAAGTGCCGGAGGTTTTCCAAGTACATTTaGAAACTCGTGGCAGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DFKTPDKSSQQTPPKCRRFSKYI*KLVAVS Trigger: TGAGACTGCCACGAGTTTCAAAATGTACTTGGAAAA...CCTCCGGCACTTAGGAGGTGTCTGCTGAGATGACTTGTCTGGAGTTTTGAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CAA 90 bp | CTTCACAATCTCTTTCCTCCAAGGGCTTTTGAGCATAAGAGTTGTGTCCACAGCTCTTCTTTACAGAATTaGGACTCCGAGACTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHNLFPPRAFEHKSCVHSSSLQN*DSETAF Trigger: AAAGGCAGTCTCGGAGTCCAAATTCTGTAAAGAAGA...GCTGTGGACACAACTCTTATGCTCAAAAGCCCTTGGAGGAAAGAGATTGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS-3UTR CAA 90 bp | AATCATCTGTTCAGAACAAATTTTCACCTTTCAGGCCATTTGATTGAGGCACATACTCCGAGACTGCCTTaGAGGCTGGTGTGGTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NHLFRTNFHLSGHLIEAHTPRLP*RLVWFD Trigger: ATCAAACCACACCAGCCTCAAAGGCAGTCTCGGAGT...ATGTGCCTCAATCAAATGGCCTGAAAGGTGAAAATTTGTTCTGAACAGATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS TCA 72 bp | GGTAGACGCCGTGCCACAGAGCAGACAGGAGGAAGGTaGGCACTGTGGGGTACCAGGGAACCCGCTCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRRRATEQTGGR*ALWGTREPAHS Trigger: GCTATGAGCGGGTTCCCTGGTACCCCACAGTGCTCACCTTCCTCCTGTCTGCTCTGTGGCACGGCGTCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS GCA 72 bp | GATGGTTGGCTCGACTGCCAACATGACGAAAGGCGCTaGCGTGTAAGAGACAGCCAACTGAGTGACAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: DGWLDCQHDERR*RVRDSQLSDSP Trigger: TGGGCTGTCACTCAGTTGGCTGTCTCTTACACGGCAGCGCCTTTCGTCATGTTGGCAGTCGAGCCAACCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS TCA 72 bp | CGAAAGGCGCTGCCGTGTAAGAGACAGCCAACTGAGTaGCAGCCCAGGTCACCACGTCATAGGCAATCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RKALPCKRQPTE*QPRSPRHRQSF Trigger: GAAAGATTGCCTATGACGTGGTGACCTGGGCTGTCACTCAGTTGGCTGTCTCTTACACGGCAGCGCCTTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CCA 72 bp | CAACTTCTGTATCACAGCTCCCATGGGAGAAGGCTCTaGCAAACTCTGGAAACCCCTTTGCGTCCAGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QLLYHSSHGRRL*QTLETPLRPVH Trigger: GTGAACTGGACGCAAAGGGGTTTCCAGAGTTTGCCAGAGCCTTCTCCCATGGGAGCTGTGATACAGAAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CAA 72 bp | CAGAAGCGAGGGCTTCGCTTTCACAGCAAGTCGGTGTaGCTCAGCAGAAAGGTCTTCAGCTTTTCGACCCAA | + |
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Preference number: 6 (lower is better) Translates to: QKRGLRFHSKSV*LSRKVFSFSTQ Trigger: TTGGGTCGAAAAGCTGAAGACCTTTCTGCTGAGCAACACCGACTTGCTGTGAAAGCGAAGCCCTCGCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CAA 90 bp | CACAGCTCCCATGGGAGAAGGCTCTGGCAAACTCTGGAAACCCCTTaGCGTCCAGTTCACTTCCAGCAACTTCATGTGTATATGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: HSSHGRRLWQTLETP*RPVHFQQLHVYMSP Trigger: GGGAGACATATACACATGAAGTTGCTGGAAGTGAACTGGACGCAAAGGGGTTTCCAGAGTTTGCCAGAGCCTTCTCCCATGGGAGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS GCA 72 bp | AGAAGCGAGGGCTTCGCTTTCACAGCAAGTCGGTGTTaGTCAGCAGAAAGGTCTTCAGCTTTTCGACCCAAT | + |
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Preference number: 6 (lower is better) Translates to: RSEGFAFTASRC*SAERSSAFRPN Trigger: ATTGGGTCGAAAAGCTGAAGACCTTTCTGCTGAGCAACACCGACTTGCTGTGAAAGCGAAGCCCTCGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CCA 72 bp | CCCAGGTCACCACGTCATAGGCAATCTTTCGAGCTTTaGAAGAGAGGAAGTGGTGTCTGTAGTTGTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PRSPRHRQSFEL*KRGSGVCSCSS Trigger: TGAGGAACAACTACAGACACCACTTCCTCTCTTCCAAAGCTCGAAAGATTGCCTATGACGTGGTGACCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CAA 90 bp | GCGGCTTGCATGACGACATATAAGTACCAGAGACGACTCAGAAAGTaGGCCTTATGTACAAACCAGTCATCAATAAGGAAGGTGACGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AACMTTYKYQRRLRK*ALCTNQSSIRKVTG Trigger: TCCCGTCACCTTCCTTATTGATGACTGGTTTGTACATAAGGCCAACTTTCTGAGTCGTCTCTGGTACTTATATGTCGTCATGCAAGCCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CAA 90 bp | TCAGTCTGCCTTCTTCTTTACAGAATTTGGACTCCGAGACTGCCTTaGAGGCTGGTGTGGTTTGATTGGCAGAAAGAGGATTATCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SVCLLLYRIWTPRLP*RLVWFDWQKEDYQQ Trigger: CTGCTGATAATCCTCTTTCTGCCAATCAAACCACACCAGCCTCAAAGGCAGTCTCGGAGTCCAAATTCTGTAAAGAAGAAGGCAGACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CCA 72 bp | ACTCCGAGACTGCCTTTGAGGCTGGTGTGGTTTGATTaGCAGAAAGAGGATTATCAGCAGACATATGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: TPRLPLRLVWFD*QKEDYQQTYDV Trigger: CACATCATATGTCTGCTGATAATCCTCTTTCTGCCAATCAAACCACACCAGCCTCAAAGGCAGTCTCGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS TCA 72 bp | TCCACGCAAAGTAATACTTGGGCTTTGCGGCTTGCATaGCGACATATAAGTACCAGAGACGACTCAGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: STQSNTWALRLA*RHISTRDDSES Trigger: ACTTTCTGAGTCGTCTCTGGTACTTATATGTCGTCATGCAAGCCGCAAAGCCCAAGTATTACTTTGCGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CAA 72 bp | AACCAGTCATCAATAAGGAAGGTGACGGGAAAGGACTaGGAGAGCGTCAAAAACAACAGGAGAGACATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: NQSSIRKVTGKD*ESVKNNRRDIK Trigger: CTTGATGTCTCTCCTGTTGTTTTTGACGCTCTCCAAGTCCTTTCCCGTCACCTTCCTTATTGATGACTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CAA 72 bp | CTTCTTCTTTACAGAATTTGGACTCCGAGACTGCCTTaGAGGCTGGTGTGGTTTGATTGGCAGAAAGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLLYRIWTPRLP*RLVWFDWQKED Trigger: ATCCTCTTTCTGCCAATCAAACCACACCAGCCTCAAAGGCAGTCTCGGAGTCCAAATTCTGTAAAGAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CAA 90 bp | TTATGTACAAACCAGTCATCAATAAGGAAGGTGACGGGAAAGGACTaGGAGAGCGTCAAAAACAACAGGAGAGACATCAAGGTCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: LCTNQSSIRKVTGKD*ESVKNNRRDIKVTH Trigger: GTGTGTGACCTTGATGTCTCTCCTGTTGTTTTTGACGCTCTCCAAGTCCTTTCCCGTCACCTTCCTTATTGATGACTGGTTTGTACATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS TCA 72 bp | TTCTTCTTTACAGAATTTGGACTCCGAGACTGCCTTTaGGGCTGGTGTGGTTTGATTGGCAGAAAGAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: FFFTEFGLRDCL*GWCGLIGRKRI Trigger: AATCCTCTTTCTGCCAATCAAACCACACCAGCCTCAAAGGCAGTCTCGGAGTCCAAATTCTGTAAAGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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| CDS CAA 72 bp | ATGACGACATATAAGTACCAGAGACGACTCAGAAAGTaGGCCTTATGTACAAACCAGTCATCAATAAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MTTYKYQRRLRK*ALCTNQSSIRK Trigger: CTTCCTTATTGATGACTGGTTTGTACATAAGGCCAACTTTCTGAGTCGTCTCTGGTACTTATATGTCGTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047311.16 |
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