Pregenerated sensors for MBNL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022139Ensembl transcript IDs: ENSMUST00000088419.13, ENSMUST00000167459.3, ENSMUST00000226800.2, ENSMUST00000227012.2, ENSMUST00000227594.2, ENSMUST00000228115.2
Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAAAGCGAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTaGGCTGCCACTCAGACTTTAGACCTGCGAGGCAGGCGTATGTTT | + |
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Preference number: 1 (lower is better) Translates to: AKRTPHSDVSPGNCA*AATQTLDLRGRRMF Trigger: AAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTCGCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR GCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTaGGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCC | + |
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Preference number: 1 (lower is better) Translates to: LDLRGRRMFYFTSLC*DCPSPQEVNHTLRS Trigger: GGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR CCA 90 bp | CCTGTGAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTaGTCTCAGGTGGTTAACTATCTTAGGCTGGAGTATACTAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: PVKENLILYVFEHHS*SQVVNYLRLEYTKH Trigger: ATGCTTAGTATACTCCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTCACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR TCA 90 bp | AAACTGGAATATTATACAGACCTCCTCACCTACAGCTTCCCTGTTTaGCTAGGTTTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCG | + |
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Preference number: 1 (lower is better) Translates to: KLEYYTDLLTYSFPV*LGFSLEELFGNRQP Trigger: CGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAAACCTAGTCAAACAGGGAAGCTGTAGGTGAGGAGGTCTGTATAATATTCCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| 3UTR GCA 90 bp | AGCTATAGTTATGGAGATAAGACAATATTCCTGGGACAGAAACTATaGTCAGAACCCTGTGAAAGAAAACCTCATCCTGTATGTCTTCGA | + |
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Preference number: 1 (lower is better) Translates to: SYSYGDKTIFLGQKL*SEPCERKPHPVCLR Trigger: TCGAAGACATACAGGATGAGGTTTTCTTTCACAGGGTTCTGAGCATAGTTTCTGTCCCAGGAATATTGTCTTATCTCCATAACTATAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR CCA 90 bp | AAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTaGTTAACTATCTTAGGCTGGAGTATACTAAGCATACCATATTTA | + |
|
Preference number: 1 (lower is better) Translates to: KTSSCMSSNITAGLR*LTILGWSILSIPYL Trigger: TAAATATGGTATGCTTAGTATACTCCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR CCA 90 bp | TCTTCGAACATCACAGCTGGTCTCAGGTGGTTAACTATCTTAGGCTaGAGTATACTAAGCATACCATATTTAATACTCATATATGACATA | + |
|
Preference number: 1 (lower is better) Translates to: SSNITAGLRWLTILG*SILSIPYLILIYDI Trigger: TATGTCATATATGAGTATTAAATATGGTATGCTTAGTATACTCCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGTGATGTTCGAAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR TCA 90 bp | TGTCCAGAAGAACTAAATTTAGCATGCAGTTTGTGGCAATTCTATTaGGGAGGAAACGGGGTAATATGTACAGTAACAATGTTTAGTTAT | + |
|
Preference number: 1 (lower is better) Translates to: CPEELNLACSLWQFY*GGNGVICTVTMFSY Trigger: ATAACTAAACATTGTTACTGTACATATTACCCCGTTTCCTCCTCAATAGAATTGCCACAAACTGCATGCTAAATTTAGTTCTTCTGGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR GCA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTCTGGGACAGAAACTATaGTCAGAACCCTGTGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPLGQKL*SEPCER Trigger: TCTTTCACAGGGTTCTGAGCATAGTTTCTGTCCCAG...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | GAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGAACAGCTGGTCTCAGGTaGTTAACTATCTTAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EPHTLMCPLAIVLELPLRTAGLR*LTILGW Trigger: CCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGT...TCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCACAGCTGGTCTCAGGTaGTTAACTATCTTAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: EAGVCFTSLLSAATVRLLTAGLR*LTILGW Trigger: CCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGT...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTGATCCAGTCAGGAAATaGAATGGTTGTGATTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: PHTLMCPLAIVLELPLRLDPVRK*NGCDWS Trigger: ACTCCAATCACAACCATTTCATTTCCTGACTGGATC...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTGATCCAGTCAGGAAATaGAATGGTTGTGATTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: TCEAGVCFTSLLSAATVRDPVRK*NGCDWS Trigger: ACTCCAATCACAACCATTTCATTTCCTGACTGGATC...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACTCAGACTTTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCCGTCTCCTCAAGAAGTaGATCATACCCTTCGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: ATQTLDLRGRRMFYFTSLRLLKK*IIPFDP Trigger: TGGATCGAAGGGTATGATTCACTTCTTGAGGAGACG...GAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTAATCGAACCTGCCCTTaGAATAGGTACTTAAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: PHTLMCPLAIVLELPLRLNRTCP*NRYLKL Trigger: TAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATT...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTTGTGGCAATTCTATTaGGGAGGAAACGGGGTAATA | + |
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Preference number: 2 (lower is better) Translates to: GVCFTSLLSAATVRLLKKLWQFY*GGNGVI Trigger: TATTACCCCGTTTCCTCCTCAATAGAATTGCCACAA...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTGAAATGAAATGGTTGTaGTTGGAGTTACAATCGAAC | + |
|
Preference number: 2 (lower is better) Translates to: TCEAGVCFTSLLSAATVREMKWL*LELQSN Trigger: GTTCGATTGTAACTCCAATCACAACCATTTCATTTC...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGGATCCAGTCAGGAAATaGAATGGTTGTGATTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GVCFTSLLSAATVRLLKKDPVRK*NGCDWS Trigger: ACTCCAATCACAACCATTTCATTTCCTGACTGGATC...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTCTGGGACAGAAACTATaGTCAGAACCCTGTGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: AYVLLHFSLLRLSVSSRSLGQKL*SEPCER Trigger: TCTTTCACAGGGTTCTGAGCATAGTTTCTGTCCCAG...ACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGACAGCTGGTCTCAGGTaGTTAACTATCTTAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PSPQEVNHTLRSSQEMKWTAGLR*LTILGW Trigger: CCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGT...CCATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | GCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTTTGTGGCAATTCTATTaGGGAGGAAACGGGGTAATA | + |
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Preference number: 2 (lower is better) Translates to: AYVLLHFSLLRLSVSSRSLWQFY*GGNGVI Trigger: TATTACCCCGTTTCCTCCTCAATAGAATTGCCACAA...ACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGCTCAGAACCCTGTaGAAGAAAACCTCATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LSVSSRSESYPSIQSGNEMLRTL*KKTSSC Trigger: ACAGGATGAGGTTTTCTTTCACAGGGTTCTGAGCAT...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGTTGTaGTTGGAGTTACAATCGAAC | + |
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Preference number: 2 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQEMKWL*LELQSN Trigger: GTTCGATTGTAACTCCAATCACAACCATTTCATTTC...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACAGCTGGTCTCAGGTaGTTAACTATCTTAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHTAGLR*LTILGW Trigger: CCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGT...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTAATGAGTATATTGTCTaGACTTTCTGCATCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: TCEAGVCFTSLLSAATVRNEYIV*TFCISY Trigger: ATAGCTGATGCAGAAAGTCCAGACAATATACTCATT...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTTTGTTGGGTTGGGTATaGAGCTCATACCGTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: ASLKDQSLRFDYWHEPFILLGWV*SSYRAK Trigger: CTTTGCACGGTATGAGCTTCATACCCAACCCAACAA...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGCTGGGACAGAAACTATaGTCAGAACCCTGTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SVSSRSESYPSIQSGNEMLGQKL*SEPCER Trigger: TCTTTCACAGGGTTCTGAGCATAGTTTCTGTCCCAG...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATCTGGGACAGAAACTATaGTCAGAACCCTGTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHLGQKL*SEPCER Trigger: TCTTTCACAGGGTTCTGAGCATAGTTTCTGTCCCAG...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGAACAGCTGGTCTCAGGTaGTTAACTATCTTAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FSLEELFGNRQPEGEFERTAGLR*LTILGW Trigger: CCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGT...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTAATCGAACCTGCCCTTaGAATAGGTACTTAAAACTA | + |
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Preference number: 2 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCNRTCP*NRYLKL Trigger: TAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATT...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR GCA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTCAATTGTGCTTGAGCTaGCACTCAGACTTTAGACCT | + |
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Preference number: 2 (lower is better) Translates to: ASLKDQSLRFDYWHEPFIQLCLS*HSDFRP Trigger: AGGTCTAAAGTCTGAGTGGCAGCTCAAGCACAATTG...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTAATGAGTATATTGTCTaGACTTTCTGCATCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCNEYIV*TFCISY Trigger: ATAGCTGATGCAGAAAGTCCAGACAATATACTCATT...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR TCA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTTTGTGGCAATTCTATTaGGGAGGAAACGGGGTAATA | + |
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Preference number: 2 (lower is better) Translates to: ASLKDQSLRFDYWHEPFILWQFY*GGNGVI Trigger: TATTACCCCGTTTCCTCCTCAATAGAATTGCCACAA...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGATTGTCTGGACTTTCTaGATCAGCTATAGTTATGGA | + |
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Preference number: 2 (lower is better) Translates to: SVSSRSESYPSIQSGNEMIVWTF*ISYSYG Trigger: TCCATAACTATAGCTGATGCAGAAAGTCCAGACAAT...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAATTAACTATCTTAGGCTaGAGTATACTAAGCATACCA | + |
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Preference number: 2 (lower is better) Translates to: LSVSSRSESYPSIQSGNELTILG*SILSIP Trigger: TGGTATGCTTAGTATACTCCAGCCTAAGATAGTTAA...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAAATGAGTATATTGTCTaGACTTTCTGCATCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LSVSSRSESYPSIQSGNENEYIV*TFCISY Trigger: ATAGCTGATGCAGAAAGTCCAGACAATATACTCATT...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGTTAACTATCTTAGGCTaGAGTATACTAAGCATACCA | + |
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Preference number: 2 (lower is better) Translates to: SVSSRSESYPSIQSGNEMLTILG*SILSIP Trigger: TGGTATGCTTAGTATACTCCAGCCTAAGATAGTTAA...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATTTAACTATCTTAGGCTaGAGTATACTAAGCATACCA | + |
|
Preference number: 2 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHLTILG*SILSIP Trigger: TGGTATGCTTAGTATACTCCAGCCTAAGATAGTTAA...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGAAATCGAACCTGCCCTTaGAATAGGTACTTAAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: FSLEELFGNRQPEGEFERNRTCP*NRYLKL Trigger: TAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATT...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAAATGAAATGGTTGTGATTGGAGTTACAATCGAACCTGCCCTTGGAATAGGTTTAACTATCTTAGGCTaGAGTATACTAAGCATACCA | + |
|
Preference number: 2 (lower is better) Translates to: GNEMVVIGVTIEPALGIGLTILG*SILSIP Trigger: TGGTATGCTTAGTATACTCCAGCCTAAGATAGTTAA...ACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR-3UTR TCA 90 bp | TACAATCGAACCTGCCCTTGGAATAGGTACTTAAAACTAAAGCTAACTGTTTATTTGTGGCAATTCTATTaGGGAGGAAACGGGGTAATA | + |
|
Preference number: 2 (lower is better) Translates to: YNRTCPWNRYLKLKLTVYLWQFY*GGNGVI Trigger: TATTACCCCGTTTCCTCCTCAATAGAATTGCCACAA...ATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR-3UTR CCA 90 bp | CTATTTTTCCATGCTGCAGTTACTTACAACCCTTTAATCCAACTCTTAAAATGCCCTTCAAGACTTTGTTaGGTTGGGTATGAAGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LFFHAAVTYNPLIQLLKCPSRLC*VGYEAH Trigger: ATGAGCTTCATACCCAACCCAACAAAGTCTTGAAGG...GCATTTTAAGAGTTGGATTAAAGGGTTGTAAGTAACTGCAGCATGGAAAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGATTAACTATCTTAGGCTaGAGTATACTAAGCATACCA | + |
|
Preference number: 2 (lower is better) Translates to: LSRNEYIVWTFCISYSYGLTILG*SILSIP Trigger: TGGTATGCTTAGTATACTCCAGCCTAAGATAGTTAA...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR-3UTR TCA 90 bp | CTATTTTTCCATGCTGCAGTTACTTACAACCCTTTAATCCAACTCTTAAAATGCGAAATGAAATGGTTGTaGTTGGAGTTACAATCGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LFFHAAVTYNPLIQLLKCEMKWL*LELQSN Trigger: GTTCGATTGTAACTCCAATCACAACCATTTCATTTC...GCATTTTAAGAGTTGGATTAAAGGGTTGTAAGTAACTGCAGCATGGAAAAATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| 3UTR-3UTR CCA 90 bp | CTATTTTTCCATGCTGCAGTTACTTACAACCCTTTAATCCAACTCTTAAAATGCCAGACGTACTTAAACTaGAATATTATACAGACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LFFHAAVTYNPLIQLLKCQTYLN*NIIQTS Trigger: GGAGGTCTGTATAATATTCCAGTTTAAGTACGTCTG...GCATTTTAAGAGTTGGATTAAAGGGTTGTAAGTAACTGCAGCATGGAAAAATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| 3UTR-3UTR CCA 90 bp | CTATTTTTCCATGCTGCAGTTACTTACAACCCTTTAATCCAACTCTTAAAATGCAATGAGTATATTGTCTaGACTTTCTGCATCAGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LFFHAAVTYNPLIQLLKCNEYIV*TFCISY Trigger: ATAGCTGATGCAGAAAGTCCAGACAATATACTCATT...GCATTTTAAGAGTTGGATTAAAGGGTTGTAAGTAACTGCAGCATGGAAAAATAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAATCGAACCTGCCCTTGGAATAGGTACTTAAAACTAAAGCTAACTGTTTATAATGAGTATATTGTCTaGACTTTCTGCATCAGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: YNRTCPWNRYLKLKLTVYNEYIV*TFCISY Trigger: ATAGCTGATGCAGAAAGTCCAGACAATATACTCATT...ATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR TCA 72 bp | ACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTaGGCTGCCACTCAGACTTTAGACCTGCGAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TPHSDVSPGNCA*AATQTLDLRGR Trigger: CCTGCCTCGCAGGTCTAAAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCGGAGGGCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCCTGGCAATTGTGCTaGAGCTGCCACTCAGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: NRRASLKDQSLRFDYWHEPWQLC*SCHSDF Trigger: AAAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGG...CTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGCCCTCCGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| 3UTR GCA 72 bp | CGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTaGGACTGTCCGTCTCCTCAAGAAGTGAATCATACC | + |
|
Preference number: 3 (lower is better) Translates to: RGRRMFYFTSLC*DCPSPQEVNHT Trigger: GGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCGGAGGGCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCAAGACTTTGTTGGGTaGGGTATGAAGCTCATACCG | + |
|
Preference number: 3 (lower is better) Translates to: NRRASLKDQSLRFDYWHEQDFVG*GMKLIP Trigger: CGGTATGAGCTTCATACCCAACCCAACAAAGTCTTG...CTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGCCCTCCGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGTCGAAATGAGTATATaGTCTGGACTTTCTGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQVEMSI*SGLSAS Trigger: TGATGCAGAAAGTCCAGACAATATACTCATTTCGAC...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTCAGACTTTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCGTCGAAATGAGTATATaGTCTGGACTTTCTGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: ATQTLDLRGRRMFYFTSLVEMSI*SGLSAS Trigger: TGATGCAGAAAGTCCAGACAATATACTCATTTCGAC...GAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR CCA 72 bp | TCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTaGTTAACTATCTTAGGCTGGAGTATACTAAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SCMSSNITAGLR*LTILGWSILSI Trigger: TATGCTTAGTATACTCCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGTCGAAATGAGTATATaGTCTGGACTTTCTGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: SVSSRSESYPSIQSGNEMVEMSI*SGLSAS Trigger: TGATGCAGAAAGTCCAGACAATATACTCATTTCGAC...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR CCA 72 bp | CATGAGCCTTTCATTCTTGTCAAGCTGGATGAAGTCTaGCAAAATCTAGGCACTTCTACAAAGTCTCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HEPFILVKLDEV*QNLGTSTKSLL Trigger: TAAGAGAGACTTTGTAGAAGTGCCTAGATTTTGCCAGACTTCATCCAGCTTGACAAGAATGAAAGGCTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| 3UTR GCA 72 bp | TATGGAGATAAGACAATATTCCTGGGACAGAAACTATaGTCAGAACCCTGTGAAAGAAAACCTCATCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: YGDKTIFLGQKL*SEPCERKPHPV Trigger: TACAGGATGAGGTTTTCTTTCACAGGGTTCTGAGCATAGTTTCTGTCCCAGGAATATTGTCTTATCTCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR TCA 72 bp | TATTATACAGACCTCCTCACCTACAGCTTCCCTGTTTaGCTAGGTTTTAGTTTAGAAGAGTTATTCGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: YYTDLLTYSFPV*LGFSLEELFGN Trigger: GTTACCGAATAACTCTTCTAAACTAAAACCTAGTCAAACAGGGAAGCTGTAGGTGAGGAGGTCTGTATAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| 3UTR TCA 72 bp | GAACTAAATTTAGCATGCAGTTTGTGGCAATTCTATTaGGGAGGAAACGGGGTAATATGTACAGTAACAATG | + |
|
Preference number: 3 (lower is better) Translates to: ELNLACSLWQFY*GGNGVICTVTM Trigger: CATTGTTACTGTACATATTACCCCGTTTCCTCCTCAATAGAATTGCCACAAACTGCATGCTAAATTTAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR CCA 72 bp | ATCACAGCTGGTCTCAGGTGGTTAACTATCTTAGGCTaGAGTATACTAAGCATACCATATTTAATACTCATA | + |
|
Preference number: 3 (lower is better) Translates to: ITAGLRWLTILG*SILSIPYLILI Trigger: TATGAGTATTAAATATGGTATGCTTAGTATACTCCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAATCGAACCTGCCCTTGGAATAGGTACTTAAAACTAAAGCTAACTGTTTATGTCGAAATGAGTATATaGTCTGGACTTTCTGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: YNRTCPWNRYLKLKLTVYVEMSI*SGLSAS Trigger: TGATGCAGAAAGTCCAGACAATATACTCATTTCGAC...ATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTGCAAGACGCTGGGGTTaGAGACCGTGCTGGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPARRWG*RPCWPR Trigger: ACGGGGCCAGCACGGTCTTCAACCCCAGCGTCTTGC...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGGAGGGAAGGCCATaGCTGTGGCCGCGGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCPEGRP*LWPRPR Trigger: CCGCGGCCGCGGCCACAGTCATGGCCTTCCCTCCGG...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226800.2 ENSMUST00000227012.2 |
||
| CDS-3UTR GCA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTGTGTGCTGCTGCAGCTaGGCACTGGTCAGAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPVCCCS*ALVRAC Trigger: GCAGGCTCTGACCAGTGCGCAGCTGCAGCAGCACAC...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGCGGCCACCGCGGCCTaGTTGGCTTGGTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQAATAA*LAWCCA Trigger: TGCGCAGCACCAAGCCAACCAGGCCGCGGTGGCCGC...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTTTGAGCCCGGGACAGTaGCCGGTGGACTTCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PHTLMCPLAIVLELPLRLLSPGQ*PVDFRE Trigger: TTCCCGGAAGTCCACCGGTCACTGTCCCGGGCTCAA...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTGCAAGACGCTGGGGTTaGAGACCGTGCTGGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVRARRWG*RPCWPR Trigger: ACGGGGCCAGCACGGTCTTCAACCCCAGCGTCTTGC...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTGCTGCAGCTGCGCACTaGTCAGAGCCTGCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPAAAAH*SEPAGS Trigger: ACTACCAGCAGGCTCTGACCAGTGCGCAGCTGCAGC...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCTTGAGCCCGGGACAGTaGCCGGTGGACTTCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EAGVCFTSLLSAATVRLLLSPGQ*PVDFRE Trigger: TTCCCGGAAGTCCACCGGTCACTGTCCCGGGCTCAA...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTGCGGACGTAGCGCTGTaGATCATGGGTACTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHTLMCPLAIVLELPLRLADVAL*IMGTVG Trigger: CCCCACAGTACCCATGATGCACAGCGCTACGTCCGC...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000088419.13 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTGCGGCCTGGTTGGCTTaGTGCTGCGCAGCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPAAWLA*CCAALI Trigger: AATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGC...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | CGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGCGGCCACCGCGGCCTaGTTGGCTTGGTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSVSSRSESYPSIQSGNAATAA*LAWCCA Trigger: TGCGCAGCACCAAGCCAACCAGGCCGCGGTGGCCGC...ATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGTTGAGCCCGGGACAGTaGCCGGTGGACTTCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQLSPGQ*PVDFRE Trigger: TTCCCGGAAGTCCACCGGTCACTGTCCCGGGCTCAA...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTGTCCTGAGAAGTTTCTaGGTTGCAGTTGAGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPVLRSF*VAVEPG Trigger: CCCGGGCTCAACTGCAACTCAGAAACTTCTCAGGAC...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | CGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATCAGTCGACTGAGTCATaGCTGTGGCCGCGGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSVSSRSESYPSIQSGNQSTES*LWPRPR Trigger: CCGCGGCCGCGGCCACAGTCATGACTCAGTCGACTG...ATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | ACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGAGCAAGACGCTGGGGTTaGAGACCGTGCTGGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TSLCCDCPSPQEVNHTLRARRWG*RPCWPR Trigger: ACGGGGCCAGCACGGTCTTCAACCCCAGCGTCTTGC...TCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGACCGGAGGGAAGGCCATaGCTGTGGCCGCGGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLEELFGNRQPEGEFERPEGRP*LWPRPR Trigger: CCGCGGCCGCGGCCACAGTCATGGCCTTCCCTCCGG...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226800.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTGCGGACGTAGCGCTGTaGATCATGGGTACTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVRADVAL*IMGTVG Trigger: CCCCACAGTACCCATGATGCACAGCGCTACGTCCGC...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088419.13 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTGACCTACAGGAAAAGTaGGCACAGGATGGAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PHTLMCPLAIVLELPLRLDLQEK*AQDGAA Trigger: CGCCGCTCCATCCTGTGCCCACTTTTCCTGTAGGTC...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTGCTGCAGCTGCGCACTaGTCAGAGCCTGCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVRAAAAH*SEPAGS Trigger: ACTACCAGCAGGCTCTGACCAGTGCGCAGCTGCAGC...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTTTGAACAGCGGCCCTTaGGGGAATCAAAGCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPLNSGP*GNQSRQ Trigger: TTGCCTGCTTTGATTCCCTCAAGGGCCGCTGTTCAA...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTTGAGCCCGGGACAGTaGCCGGTGGACTTCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVCFTSLLSAATVRLLKKLSPGQ*PVDFRE Trigger: TTCCCGGAAGTCCACCGGTCACTGTCCCGGGCTCAA...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | AACCGGAGGGCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGGCAAGACGCTGGGGTTaGAGACCGTGCTGGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NRRASLKDQSLRFDYWHEARRWG*RPCWPR Trigger: ACGGGGCCAGCACGGTCTTCAACCCCAGCGTCTTGC...CTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGCCCTCCGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGCTGTCTGCCGGGTGTaGAAAGCGGCAGTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQAVCRV*KAAVCL Trigger: GAGACAGACTGCCGCTTTGCACACCCGGCAGACAGC...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTTGGTTGGCTTGGTGCTaGGCAGCTTTGATTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPWLAWC*AALILA Trigger: GGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCA...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | GAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGATGCAGGAGTTGTTGCTaGAGAGACAGTGGCGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: EPHTLMCPLAIVLELPLRCRSCC*RDSGGR Trigger: ACGTCCGCCACTGTCTCTGCAGCAACAACTCCTGCA...TCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTGACCTACAGGAAAAGTaGGCACAGGATGGAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVRDLQEK*AQDGAA Trigger: CGCCGCTCCATCCTGTGCCCACTTTTCCTGTAGGTC...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTTTGAACAGCGGCCCTTaGGGGAATCAAAGCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PHTLMCPLAIVLELPLRLLNSGP*GNQSRQ Trigger: TTGCCTGCTTTGATTCCCTCAAGGGCCGCTGTTCAA...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGCAGTCGACTGAGTCATaGCTGTGGCCGCGGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRSESYPSIQSGNEMQSTES*LWPRPR Trigger: CCGCGGCCGCGGCCACAGTCATGACTCAGTCGACTG...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATCAGTCGACTGAGTCATaGCTGTGGCCGCGGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHQSTES*LWPRPR Trigger: CCGCGGCCGCGGCCACAGTCATGACTCAGTCGACTG...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | ACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGAGCTGTCTGCCGGGTGTaGAAAGCGGCAGTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSLCCDCPSPQEVNHTLRAVCRV*KAAVCL Trigger: GAGACAGACTGCCGCTTTGCACACCCGGCAGACAGC...TCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTTGGTTGGCTTGGTGCTaGGCAGCTTTGATTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PHTLMCPLAIVLELPLRLWLAWC*AALILA Trigger: GGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCA...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGAGCCTGGTTGGCTTGGTaGTGCGCAGCTTTGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EPHTLMCPLAIVLELPLRAWLAW*CAALIL Trigger: CAAAATCAAAGCTGCGCAGCACCAAGCCAACCAGGC...TCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCGGCCAGGTCTACAGTTaGTTCGAGAGGTCGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EAGVCFTSLLSAATVRLLGQVYS*FERSLQ Trigger: CTGAAGCGACCTCTCGAAGCAACTGTAGACCTGGCC...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTGCGGACGTAGCGCTGTaGATCATGGGTACTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCADVAL*IMGTVG Trigger: CCCCACAGTACCCATGATGCACAGCGCTACGTCCGC...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088419.13 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTGAGCACGTTCCTCTCTaGTACTGTCTGCAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVREHVPL*YCLQTS Trigger: GGAGGTCTGCAGACAGTACCAGAGAGGAACGTGCTC...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTGCGGCCACCGCGGCCTaGTTGGCTTGGTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLKDQSLRFDYWHEPFIAATAA*LAWCCA Trigger: TGCGCAGCACCAAGCCAACCAGGCCGCGGTGGCCGC...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR CCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTGCTGCAGCTGCGCACTaGTCAGAGCCTGCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCAAAAH*SEPAGS Trigger: ACTACCAGCAGGCTCTGACCAGTGCGCAGCTGCAGC...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | ACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGAGCTGCAGCTGCGCACTaGTCAGAGCCTGCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSLCCDCPSPQEVNHTLRAAAAH*SEPAGS Trigger: ACTACCAGCAGGCTCTGACCAGTGCGCAGCTGCAGC...TCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTTTGAGCCCGGGACAGTaGCCGGTGGACTTCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGLSPGQ*PVDFRE Trigger: TTCCCGGAAGTCCACCGGTCACTGTCCCGGGCTCAA...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | GCCACTCAGACTTTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTTTCTGAGTTGCAGTTaGGCCCGGGACAGTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: ATQTLDLRGRRMFYFTSLFLSCS*ARDSDR Trigger: CCGGTCACTGTCCCGGGCTCAACTGCAACTCAGAAA...GAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTTTCTGAGTTGCAGTTaGGCCCGGGACAGTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVCFTSLLSAATVRLLKKFLSCS*ARDSDR Trigger: CCGGTCACTGTCCCGGGCTCAACTGCAACTCAGAAA...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGGATCATGGTGCTGTCTaGCGGGTGTGCAAAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVCFTSLLSAATVRLLKKDHGAV*RVCKAA Trigger: TGCCGCTTTGCACACCCGGCAGACAGCACCATGATC...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTGATCATGGTGCTGTCTaGCGGGTGTGCAAAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCDHGAV*RVCKAA Trigger: TGCCGCTTTGCACACCCGGCAGACAGCACCATGATC...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCTGGTTGGCTTGGTGCTaGGCAGCTTTGATTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EAGVCFTSLLSAATVRLLWLAWC*AALILA Trigger: GGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCA...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTGCCTGGTTGGCTTGGTaGTGCGCAGCTTTGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVRAWLAW*CAALIL Trigger: CAAAATCAAAGCTGCGCAGCACCAAGCCAACCAGGC...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGCGGACGTAGCGCTGTaGATCATGGGTACTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSVSSRSESYPSIQSGNADVAL*IMGTVG Trigger: CCCCACAGTACCCATGATGCACAGCGCTACGTCCGC...ATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000088419.13 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAGCACGTTCCTCTCTaGTACTGTCTGCAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQEHVPL*YCLQTS Trigger: GGAGGTCTGCAGACAGTACCAGAGAGGAACGTGCTC...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GCCACTCAGACTTTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCGACCTACAGGAAAAGTaGGCACAGGATGGAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ATQTLDLRGRRMFYFTSLDLQEK*AQDGAA Trigger: CGCCGCTCCATCCTGTGCCCACTTTTCCTGTAGGTC...GAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTCCGCATTTGTCCCTATaGTGGGACCTACAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHTLMCPLAIVLELPLRLPHLSL*WDLQEK Trigger: CTTTTCCTGTAGGTCCCACCATAGGGACAAATGCGG...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGCGTTTGTGTCGATCATaGTGCTGTCTGCCGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQRLCRS*CCLPGV Trigger: CACACCCGGCAGACAGCACCATGATCGACACAAACG...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTGCGGCCTGGTTGGCTTaGTGCTGCGCAGCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCAAWLA*CCAALI Trigger: AATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGC...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | AACCGGAGGGCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGACCCAACTCCAGGGGTaGCAGGCGCTAAGTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NRRASLKDQSLRFDYWHETQLQG*QALSKE Trigger: CTCCTTACTTAGCGCCTGTCACCCCTGGAGTTGGGT...CTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGCCCTCCGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR TCA 90 bp | CGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATACCCAACTCCAGGGGTaGCAGGCGCTAAGTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSVSSRSESYPSIQSGNTQLQG*QALSKE Trigger: CTCCTTACTTAGCGCCTGTCACCCCTGGAGTTGGGT...ATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCTCTTTGGTAAGGGATaGAGAGCACCCGGAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCLFGKG*RAPGGK Trigger: CTTCCCTCCGGGTGCTCTTCATCCCTTACCAAAGAG...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | GGACAGAAACTATGCTCAGAACCCTGTGAAAGAAAACCTCATCCTGTATGTCTTGCAAGACGCTGGGGTTaGAGACCGTGCTGGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GQKLCSEPCERKPHPVCLARRWG*RPCWPR Trigger: ACGGGGCCAGCACGGTCTTCAACCCCAGCGTCTTGC...AAGACATACAGGATGAGGTTTTCTTTCACAGGGTTCTGAGCATAGTTTCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAGCTGTCTGCCGGGTGTaGAAAGCGGCAGTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSRSESYPSIQSGNEAVCRV*KAAVCL Trigger: GAGACAGACTGCCGCTTTGCACACCCGGCAGACAGC...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | GCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGATCATGGTGCTGTCTaGCGGGTGTGCAAAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AYVLLHFSLLRLSVSSRSDHGAV*RVCKAA Trigger: TGCCGCTTTGCACACCCGGCAGACAGCACCATGATC...ACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTGAAGGGGACACTTGTTaGAGGAGTTGTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVREGDTC*RSCCCR Trigger: TCTGCAGCAACAACTCCTGCAACAAGTGTCCCCTTC...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGAATAAATTGCATCTGCTaGGCAAGCATCGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPHTLMCPLAIVLELPLRINCIC*ASIAAA Trigger: TGCAGCAGCGATGCTTGCCCAGCAGATGCAATTTAT...TCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGAGCACAGTTTCCTCGCTaGAACTCCCTGCATACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLCCDCPSPQEVNHTLRAQFPR*NSLHTS Trigger: GGAGGTATGCAGGGAGTTCCAGCGAGGAAACTGTGC...TCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GCCACTCAGACTTTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCCGTTTGTGTCGATCATaGTGCTGTCTGCCGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATQTLDLRGRRMFYFTSLRLCRS*CCLPGV Trigger: CACACCCGGCAGACAGCACCATGATCGACACAAACG...GAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGCGGCCACCGCGGCCTaGTTGGCTTGGTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRNEYIVWTFCISYSYGAATAA*LAWCCA Trigger: TGCGCAGCACCAAGCCAACCAGGCCGCGGTGGCCGC...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTTTATCTGATTGGCTGTaGCTGTTGCTGCGAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVRLSDWL*LLLRRG Trigger: TCCCCTTCGCAGCAACAGCCACAGCCAATCAGATAA...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCTTATCTGATTGGCTGTaGCTGTTGCTGCGAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EAGVCFTSLLSAATVRLLLSDWL*LLLRRG Trigger: TCCCCTTCGCAGCAACAGCCACAGCCAATCAGATAA...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTTGTGTCGATCATGGTaGTGTCTGCCGGGTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVCFTSLLSAATVRLLKKLCRSW*CLPGVQ Trigger: TTGCACACCCGGCAGACAGCACCATGATCGACACAA...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGAGTGTGCTGCTGCAGCTaGGCACTGGTCAGAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLEELFGNRQPEGEFERVCCCS*ALVRAC Trigger: GCAGGCTCTGACCAGTGCGCAGCTGCAGCAGCACAC...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR CCA 90 bp | GAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGAATGGAGCGGCGTTCCTaGAAACATAAATTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPHTLMCPLAIVLELPLRMERRS*KHKLHL Trigger: CAGATGCAATTTATGTTTCCAGGAACGCCGCTCCAT...TCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTATGGAGCGGCGTTCCTaGAAACATAAATTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHTLMCPLAIVLELPLRLMERRS*KHKLHL Trigger: CAGATGCAATTTATGTTTCCAGGAACGCCGCTCCAT...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTAAAGTGGGCACAGGATaGAGCGGCGTTCCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AYVLLHFSLLRLSVSSRSKVGTG*SGVPGN Trigger: GTTTCCAGGAACGCCGCTCCATCCTGTGCCCACTTT...ACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTCGGGACAGTGACCGGTaGACTTCCGGGAACAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGRDSDR*TSGNND Trigger: GTCATTGTTCCCGGAAGTCCACCGGTCACTGTCCCG...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | CCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGCGGGACAGTGACCGGTaGACTTCCGGGAACAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPQEVNHTLRSSQEMKWRDSDR*TSGNND Trigger: GTCATTGTTCCCGGAAGTCCACCGGTCACTGTCCCG...CCATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAACGGGACAGTGACCGGTaGACTTCCGGGAACAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSRSESYPSIQSGNERDSDR*TSGNND Trigger: GTCATTGTTCCCGGAAGTCCACCGGTCACTGTCCCG...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | CGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGCACAGTTTCCTCGCTaGAACTCCCTGCATACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSVSSRSESYPSIQSGNAQFPR*NSLHTS Trigger: GGAGGTATGCAGGGAGTTCCAGCGAGGAAACTGTGC...ATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTCGTTTGTGTCGATCATaGTGCTGTCTGCCGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AYVLLHFSLLRLSVSSRSRLCRS*CCLPGV Trigger: CACACCCGGCAGACAGCACCATGATCGACACAAACG...ACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTGCGGCCTGGTTGGCTTaGTGCTGCGCAGCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGAAWLA*CCAALI Trigger: AATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGC...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTTCAGAATTATCTGATTaGCTGTGGCTGTTGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PHTLMCPLAIVLELPLRLSELSD*LWLLLR Trigger: TCGCAGCAACAGCCACAGCCAATCAGATAATTCTGA...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | CGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATTTGAACAGCGGCCCTTaGGGGAATCAAAGCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLSVSSRSESYPSIQSGNLNSGP*GNQSRQ Trigger: TTGCCTGCTTTGATTCCCTCAAGGGCCGCTGTTCAA...ATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGACCCAACTCCAGGGGTaGCAGGCGCTAAGTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRSESYPSIQSGNEMTQLQG*QALSKE Trigger: CTCCTTACTTAGCGCCTGTCACCCCTGGAGTTGGGT...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGTTTCTGAGTTGCAGTTaGGCCCGGGACAGTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRSESYPSIQSGNEMFLSCS*ARDSDR Trigger: CCGGTCACTGTCCCGGGCTCAACTGCAACTCAGAAA...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTGTCCTGAGAAGTTTCTaGGTTGCAGTTGAGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGVLRSF*VAVEPG Trigger: CCCGGGCTCAACTGCAACTCAGAAACTTCTCAGGAC...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCCAGTTTATCAGTCCTaGGAAGTTTCTGAGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVRPVYQS*EVSELQ Trigger: CTGCAACTCAGAAACTTCTCAGGACTGATAAACTGG...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAACTCTTTGGTAAGGGATaGAGAGCACCCGGAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSRSESYPSIQSGNELFGKG*RAPGGK Trigger: CTTCCCTCCGGGTGCTCTTCATCCCTTACCAAAGAG...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAACATAAATTGCATCTaGTGGGCAAGCATCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EAGVCFTSLLSAATVRLLNINCI*WASIAA Trigger: AGCAGCGATGCTTGCCCAGCAGATGCAATTTATGTT...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGCTCGCTGGAACTCCCTaGATACCTCCAGTTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVCFTSLLSAATVRLLKKLAGTP*IPPVYQ Trigger: CTGATAAACTGGAGGTATGCAGGGAGTTCCAGCGAG...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GGAAATGAAATGGTTGTGATTGGAGTTACAATCGAACCTGCCCTTGGAATAGGTGCTGTCTGCCGGGTGTaGAAAGCGGCAGTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNEMVVIGVTIEPALGIGAVCRV*KAAVCL Trigger: GAGACAGACTGCCGCTTTGCACACCCGGCAGACAGC...ACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | AACCGGAGGGCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGTTGTGTCGATCATGGTaGTGTCTGCCGGGTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NRRASLKDQSLRFDYWHELCRSW*CLPGVQ Trigger: TTGCACACCCGGCAGACAGCACCATGATCGACACAA...CTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGCCCTCCGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR GCA 90 bp | GAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGATGCATTTCTCCCTCATaGAACGCCCCTTTATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EPHTLMCPLAIVLELPLRCISPS*NAPLCN Trigger: ATTACATAAAGGGGCGTTGCATGAGGGAGAAATGCA...TCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAGGCCAGGTCTACAGTTaGTTCGAGAGGTCGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSRSESYPSIQSGNEGQVYS*FERSLQ Trigger: CTGAAGCGACCTCTCGAAGCAACTGTAGACCTGGCC...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGTGGTCTGTCCAGAAGAACTAAATTTAGCATGCAGTTTGTGGCAATTCTAGTGTGCTGCTGCAGCTaGGCACTGGTCAGAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCGLSRRTKFSMQFVAILVCCCS*ALVRAC Trigger: GCAGGCTCTGACCAGTGCGCAGCTGCAGCAGCACAC...TAGAATTGCCACAAACTGCATGCTAAATTTAGTTCTTCTGGACAGACCACAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | CCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGTGCAGGAGTTGTTGCTaGAGAGACAGTGGCGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPQEVNHTLRSSQEMKWCRSCC*RDSGGR Trigger: ACGTCCGCCACTGTCTCTGCAGCAACAACTCCTGCA...CCATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | AACCGGAGGGCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGGCGGACGTAGCGCTGTaGATCATGGGTACAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: NRRASLKDQSLRFDYWHEADVAL*IMGTIL Trigger: CAGTATTGTACCCATGATGCACAGCGCTACGTCCGC...CTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGCCCTCCGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167459.3 |
||
| CDS-3UTR CCA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTAAAGTGGGCACAGGATaGAGCGGCGTTCCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGKVGTG*SGVPGN Trigger: GTTTCCAGGAACGCCGCTCCATCCTGTGCCCACTTT...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GCCACTCAGACTTTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCCCGCATTTGTCCCTATaGTGGGACCTACAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATQTLDLRGRRMFYFTSLPHLSL*WDLQEK Trigger: CTTTTCCTGTAGGTCCCACCATAGGGACAAATGCGG...GAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | ACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGACCGCATTTGTCCCTATaGTGGGACCTACAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSLCCDCPSPQEVNHTLRPHLSL*WDLQEK Trigger: CTTTTCCTGTAGGTCCCACCATAGGGACAAATGCGG...TCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGCGGGACAGTGACCGGTaGACTTCCGGGAACAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRSESYPSIQSGNEMRDSDR*TSGNND Trigger: GTCATTGTTCCCGGAAGTCCACCGGTCACTGTCCCG...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | CCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGCGTTTGTGTCGATCATaGTGCTGTCTGCCGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPQEVNHTLRSSQEMKWRLCRS*CCLPGV Trigger: CACACCCGGCAGACAGCACCATGATCGACACAAACG...CCATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGAGCGGCCACCGCGGCCTaGTTGGCTTGGTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EMSILSGLSASAIVMEIRAATAA*LAWCCA Trigger: TGCGCAGCACCAAGCCAACCAGGCCGCGGTGGCCGC...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTTCAGAATTATCTGATTaGCTGTGGCTGTTGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVRSELSD*LWLLLR Trigger: TCGCAGCAACAGCCACAGCCAATCAGATAATTCTGA...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGCCAGTTTATCAGTCCTaGGAAGTTTCTGAGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQPVYQS*EVSELQ Trigger: CTGCAACTCAGAAACTTCTCAGGACTGATAAACTGG...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGCTCTTTGGTAAGGGATaGAGAGCACCCGGAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRSESYPSIQSGNEMLFGKG*RAPGGK Trigger: CTTCCCTCCGGGTGCTCTTCATCCCTTACCAAAGAG...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATCTCTTTGGTAAGGGATaGAGAGCACCCGGAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHLFGKG*RAPGGK Trigger: CTTCCCTCCGGGTGCTCTTCATCCCTTACCAAAGAG...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | GAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGATATTTCAGAATTATCTaGTTGGCTGTGGCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPHTLMCPLAIVLELPLRYFRII*LAVAVA Trigger: AGCAACAGCCACAGCCAATCAGATAATTCTGAAATA...TCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GGAAATGAAATGGTTGTGATTGGAGTTACAATCGAACCTGCCCTTGGAATAGGTGATCATGGTGCTGTCTaGCGGGTGTGCAAAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNEMVVIGVTIEPALGIGDHGAV*RVCKAA Trigger: TGCCGCTTTGCACACCCGGCAGACAGCACCATGATC...ACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTTTGTGTCGATCATGGTaGTGTCTGCCGGGTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGLCRSW*CLPGVQ Trigger: TTGCACACCCGGCAGACAGCACCATGATCGACACAA...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCTGCATTTCTCCCTCATaGAACGCCCCTTTATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EAGVCFTSLLSAATVRLLCISPS*NAPLCN Trigger: ATTACATAAAGGGGCGTTGCATGAGGGAGAAATGCA...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTGAGGGTGAAAATATTTaGATTTCTCCCTCATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PHTLMCPLAIVLELPLRLEGENI*ISPSCN Trigger: GTTGCATGAGGGAGAAATGCAAATATTTTCACCCTC...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAATGTTGCAGGAGTTGTTaGTGCAGAGACAGTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSRSESYPSIQSGNECCRSC*CRDSGG Trigger: TCCGCCACTGTCTCTGCAGCAACAACTCCTGCAACA...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAAGGGGACACTTGTTaGAGGAGTTGTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AYVLLHFSLLRLSVSSRSEGDTC*RSCCCR Trigger: TCTGCAGCAACAACTCCTGCAACAAGTGTCCCCTTC...ACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTGACCTACAGGAAAAGTaGGCACAGGATGGAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ASLKDQSLRFDYWHEPFIDLQEK*AQDGAA Trigger: CGCCGCTCCATCCTGTGCCCACTTTTCCTGTAGGTC...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR CCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCATTTGTCCCTATGGTaGGACCTACAGGAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCHLSLW*DLQEKW Trigger: CCACTTTTCCTGTAGGTCCCACCATAGGGACAAATG...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | AATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTCTTGTCAAGCTGGATGCGGGACAGTGACCGGTaGACTTCCGGGAACAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NPLDSTIGMSLSFLSSWMRDSDR*TSGNND Trigger: GTCATTGTTCCCGGAAGTCCACCGGTCACTGTCCCG...CATCCAGCTTGACAAGAATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR CCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATGCACAGTTTCCTCGCTaGAACTCCCTGCATACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHAQFPR*NSLHTS Trigger: GGAGGTATGCAGGGAGTTCCAGCGAGGAAACTGTGC...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGTCAGAATTATCTGATTaGCTGTGGCTGTTGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQSELSD*LWLLLR Trigger: TCGCAGCAACAGCCACAGCCAATCAGATAATTCTGA...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | AATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTCTTGTCAAGCTGGATGGTCCTGAGAAGTTTCTaGGTTGCAGTTGAGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NPLDSTIGMSLSFLSSWMVLRSF*VAVEPG Trigger: CCCGGGCTCAACTGCAACTCAGAAACTTCTCAGGAC...CATCCAGCTTGACAAGAATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTTATTTCAGAATTATCTaGTTGGCTGTGGCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCEAGVCFTSLLSAATVRYFRII*LAVAVA Trigger: AGCAACAGCCACAGCCAATCAGATAATTCTGAAATA...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTCTCGCTGGAACTCCCTaGATACCTCCAGTTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGLAGTP*IPPVYQ Trigger: CTGATAAACTGGAGGTATGCAGGGAGTTCCAGCGAG...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATGCCTGGTTGGCTTGGTaGTGCGCAGCTTTGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHAWLAW*CAALIL Trigger: CAAAATCAAAGCTGCGCAGCACCAAGCCAACCAGGC...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GGACAGAAACTATGCTCAGAACCCTGTGAAAGAAAACCTCATCCTGTATGTCTTTGCAGGAGTTGTTGCTaGAGAGACAGTGGCGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: GQKLCSEPCERKPHPVCLCRSCC*RDSGGR Trigger: ACGTCCGCCACTGTCTCTGCAGCAACAACTCCTGCA...AAGACATACAGGATGAGGTTTTCTTTCACAGGGTTCTGAGCATAGTTTCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GGAAATGAAATGGTTGTGATTGGAGTTACAATCGAACCTGCCCTTGGAATAGGTTGCAGGAGTTGTTGCTaGAGAGACAGTGGCGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: GNEMVVIGVTIEPALGIGCRSCC*RDSGGR Trigger: ACGTCCGCCACTGTCTCTGCAGCAACAACTCCTGCA...ACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAGAAGGGGACACTTGTTaGAGGAGTTGTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSRSESYPSIQSGNEEGDTC*RSCCCR Trigger: TCTGCAGCAACAACTCCTGCAACAAGTGTCCCCTTC...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAATTATCTGATTGGCTGTaGCTGTTGCTGCGAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSRSESYPSIQSGNELSDWL*LLLRRG Trigger: TCCCCTTCGCAGCAACAGCCACAGCCAATCAGATAA...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGATTGAACAGCGGCCCTTaGGGGAATCAAAGCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLEELFGNRQPEGEFERLNSGP*GNQSRQ Trigger: TTGCCTGCTTTGATTCCCTCAAGGGCCGCTGTTCAA...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR GCA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGATTGTGTCGATCATGGTaGTGTCTGCCGGGTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLEELFGNRQPEGEFERLCRSW*CLPGVQ Trigger: TTGCACACCCGGCAGACAGCACCATGATCGACACAA...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR GCA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGCATTTCTCCCTCATaGAACGCCCCTTTATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVCFTSLLSAATVRLLKKCISPS*NAPLCN Trigger: ATTACATAAAGGGGCGTTGCATGAGGGAGAAATGCA...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTTTTGGCCTGCAAGTGTaGAGGAGGGTGAAAATATTT | + |
|
Preference number: 4 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCFGLQV*RRVKIF Trigger: AAATATTTTCACCCTCCTGCACACTTGCAGGCCAAA...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | AATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTCTTGTCAAGCTGGATGTGGTTGGCTTGGTGCTaGGCAGCTTTGATTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPLDSTIGMSLSFLSSWMWLAWC*AALILA Trigger: GGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCA...CATCCAGCTTGACAAGAATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR GCA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGATGGTTGGCTTGGTGCTaGGCAGCTTTGATTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLEELFGNRQPEGEFERWLAWC*AALILA Trigger: GGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCA...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR GCA 90 bp | GGAAATGAAATGGTTGTGATTGGAGTTACAATCGAACCTGCCCTTGGAATAGGTGCCTGGTTGGCTTGGTaGTGCGCAGCTTTGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GNEMVVIGVTIEPALGIGAWLAW*CAALIL Trigger: CAAAATCAAAGCTGCGCAGCACCAAGCCAACCAGGC...ACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGAGCCTGGTTGGCTTGGTaGTGCGCAGCTTTGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLEELFGNRQPEGEFERAWLAW*CAALIL Trigger: CAAAATCAAAGCTGCGCAGCACCAAGCCAACCAGGC...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR GCA 90 bp | CTATTTTTCCATGCTGCAGTTACTTACAACCCTTTAATCCAACTCTTAAAATGCGTGTGCTGCTGCAGCTaGGCACTGGTCAGAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFFHAAVTYNPLIQLLKCVCCCS*ALVRAC Trigger: GCAGGCTCTGACCAGTGCGCAGCTGCAGCAGCACAC...GCATTTTAAGAGTTGGATTAAAGGGTTGTAAGTAACTGCAGCATGGAAAAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR GCA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTTGTTGCAGGAGTTGTTaGTGCAGAGACAGTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASLKDQSLRFDYWHEPFICCRSC*CRDSGG Trigger: TCCGCCACTGTCTCTGCAGCAACAACTCCTGCAACA...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR GCA 90 bp | GGAAATGAAATGGTTGTGATTGGAGTTACAATCGAACCTGCCCTTGGAATAGGTTGTTGCAGGAGTTGTTaGTGCAGAGACAGTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNEMVVIGVTIEPALGIGCCRSC*CRDSGG Trigger: TCCGCCACTGTCTCTGCAGCAACAACTCCTGCAACA...ACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGTGGTCTGTCCAGAAGAACTAAATTTAGCATGCAGTTTGTGGCAATTCTAGAGCACGTTCCTCTCTaGTACTGTCTGCAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCGLSRRTKFSMQFVAILEHVPL*YCLQTS Trigger: GGAGGTCTGCAGACAGTACCAGAGAGGAACGTGCTC...TAGAATTGCCACAAACTGCATGCTAAATTTAGTTCTTCTGGACAGACCACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTATGGAGCGGCGTTCCTaGAAACATAAATTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: AYVLLHFSLLRLSVSSRSMERRS*KHKLHL Trigger: CAGATGCAATTTATGTTTCCAGGAACGCCGCTCCAT...ACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGTGGTCTGTCCAGAAGAACTAAATTTAGCATGCAGTTTGTGGCAATTCTAAAAGTGGGCACAGGATaGAGCGGCGTTCCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GCGLSRRTKFSMQFVAILKVGTG*SGVPGN Trigger: GTTTCCAGGAACGCCGCTCCATCCTGTGCCCACTTT...TAGAATTGCCACAAACTGCATGCTAAATTTAGTTCTTCTGGACAGACCACAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGTGGTCTGTCCAGAAGAACTAAATTTAGCATGCAGTTTGTGGCAATTCTAGCACAGTTTCCTCGCTaGAACTCCCTGCATACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCGLSRRTKFSMQFVAILAQFPR*NSLHTS Trigger: GGAGGTATGCAGGGAGTTCCAGCGAGGAAACTGTGC...TAGAATTGCCACAAACTGCATGCTAAATTTAGTTCTTCTGGACAGACCACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGTGGTCTGTCCAGAAGAACTAAATTTAGCATGCAGTTTGTGGCAATTCTACGTTTGTGTCGATCATaGTGCTGTCTGCCGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCGLSRRTKFSMQFVAILRLCRS*CCLPGV Trigger: CACACCCGGCAGACAGCACCATGATCGACACAAACG...TAGAATTGCCACAAACTGCATGCTAAATTTAGTTCTTCTGGACAGACCACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGTCCTGAGAAGTTTCTaGGTTGCAGTTGAGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSRNEYIVWTFCISYSYGVLRSF*VAVEPG Trigger: CCCGGGCTCAACTGCAACTCAGAAACTTCTCAGGAC...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | CCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGCCAGTTTATCAGTCCTaGGAAGTTTCTGAGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPQEVNHTLRSSQEMKWPVYQS*EVSELQ Trigger: CTGCAACTCAGAAACTTCTCAGGACTGATAAACTGG...CCATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGACTCTTTGGTAAGGGATaGAGAGCACCCGGAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRNEYIVWTFCISYSYGLFGKG*RAPGGK Trigger: CTTCCCTCCGGGTGCTCTTCATCCCTTACCAAAGAG...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | ACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATATTTCAGAATTATCTaGTTGGCTGTGGCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLCCDCPSPQEVNHTLRYFRII*LAVAVA Trigger: AGCAACAGCCACAGCCAATCAGATAATTCTGAAATA...TCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAAACATAAATTGCATCTaGTGGGCAAGCATCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSRSESYPSIQSGNENINCI*WASIAA Trigger: AGCAGCGATGCTTGCCCAGCAGATGCAATTTATGTT...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | GCCACTCAGACTTTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCGAGGGTGAAAATATTTaGATTTCTCCCTCATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ATQTLDLRGRRMFYFTSLEGENI*ISPSCN Trigger: GTTGCATGAGGGAGAAATGCAAATATTTTCACCCTC...GAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATTTTGGCCTGCAAGTGTaGAGGAGGGTGAAAATATTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSVSSRSESYPSIQSGNFGLQV*RRVKIF Trigger: AAATATTTTCACCCTCCTGCACACTTGCAGGCCAAA...ATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGGCCAGGTCTACAGTTaGTTCGAGAGGTCGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRNEYIVWTFCISYSYGGQVYS*FERSLQ Trigger: CTGAAGCGACCTCTCGAAGCAACTGTAGACCTGGCC...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | GGAAATGAAATGGTTGTGATTGGAGTTACAATCGAACCTGCCCTTGGAATAGGTGAAGGGGACACTTGTTaGAGGAGTTGTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNEMVVIGVTIEPALGIGEGDTC*RSCCCR Trigger: TCTGCAGCAACAACTCCTGCAACAAGTGTCCCCTTC...ACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATCATTTGTCCCTATGGTaGGACCTACAGGAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHHLSLW*DLQEKW Trigger: CCACTTTTCCTGTAGGTCCCACCATAGGGACAAATG...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTTCAGAATTATCTGATTaGCTGTGGCTGTTGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGSELSD*LWLLLR Trigger: TCGCAGCAACAGCCACAGCCAATCAGATAATTCTGA...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR CAA 72 bp | AAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTaGAAAGACCAATCCCTTAGATTCGACTATTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSYSVTGNRRAS*KDQSLRFDYWH Trigger: ATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR TCA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGAACCCAACTCCAGGGGTaGCAGGCGCTAAGTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EMSILSGLSASAIVMEIRTQLQG*QALSKE Trigger: CTCCTTACTTAGCGCCTGTCACCCCTGGAGTTGGGT...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | TACAATCGAACCTGCCCTTGGAATAGGTACTTAAAACTAAAGCTAACTGTTTATTTTCTGAGTTGCAGTTaGGCCCGGGACAGTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: YNRTCPWNRYLKLKLTVYFLSCS*ARDSDR Trigger: CCGGTCACTGTCCCGGGCTCAACTGCAACTCAGAAA...ATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | AAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTTACCAGTTTATCAGTCCTaGGAAGTTTCTGAGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKTSSCMSSNITAGLRWLPVYQS*EVSELQ Trigger: CTGCAACTCAGAAACTTCTCAGGACTGATAAACTGG...TAACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGATTGTGTCGATCATGGTaGTGTCTGCCGGGTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSRNEYIVWTFCISYSYGLCRSW*CLPGVQ Trigger: TTGCACACCCGGCAGACAGCACCATGATCGACACAA...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAATGCATTTCTCCCTCATaGAACGCCCCTTTATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSRSESYPSIQSGNECISPS*NAPLCN Trigger: ATTACATAAAGGGGCGTTGCATGAGGGAGAAATGCA...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGTGCATTTCTCCCTCATaGAACGCCCCTTTATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPQEVNHTLRSSQEMKWCISPS*NAPLCN Trigger: ATTACATAAAGGGGCGTTGCATGAGGGAGAAATGCA...CCATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGATGTTGCAGGAGTTGTTaGTGCAGAGACAGTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSRNEYIVWTFCISYSYGCCRSC*CRDSGG Trigger: TCCGCCACTGTCTCTGCAGCAACAACTCCTGCAACA...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATATGGAGCGGCGTTCCTaGAAACATAAATTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHMERRS*KHKLHL Trigger: CAGATGCAATTTATGTTTCCAGGAACGCCGCTCCAT...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | CTATTTTTCCATGCTGCAGTTACTTACAACCCTTTAATCCAACTCTTAAAATGCGACCTACAGGAAAAGTaGGCACAGGATGGAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LFFHAAVTYNPLIQLLKCDLQEK*AQDGAA Trigger: CGCCGCTCCATCCTGTGCCCACTTTTCCTGTAGGTC...GCATTTTAAGAGTTGGATTAAAGGGTTGTAAGTAACTGCAGCATGGAAAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR CCA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTCATTTGTCCCTATGGTaGGACCTACAGGAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLKDQSLRFDYWHEPFIHLSLW*DLQEKW Trigger: CCACTTTTCCTGTAGGTCCCACCATAGGGACAAATG...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR CCA 90 bp | TACAATCGAACCTGCCCTTGGAATAGGTACTTAAAACTAAAGCTAACTGTTTATGCGGCCTGGTTGGCTTaGTGCTGCGCAGCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: YNRTCPWNRYLKLKLTVYAAWLA*CCAALI Trigger: AATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGC...ATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | CTATTTTTCCATGCTGCAGTTACTTACAACCCTTTAATCCAACTCTTAAAATGCGTCCTGAGAAGTTTCTaGGTTGCAGTTGAGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFFHAAVTYNPLIQLLKCVLRSF*VAVEPG Trigger: CCCGGGCTCAACTGCAACTCAGAAACTTCTCAGGAC...GCATTTTAAGAGTTGGATTAAAGGGTTGTAAGTAACTGCAGCATGGAAAAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR GCA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTAACATAAATTGCATCTaGTGGGCAAGCATCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLKDQSLRFDYWHEPFININCI*WASIAA Trigger: AGCAGCGATGCTTGCCCAGCAGATGCAATTTATGTT...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR GCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATTTTGGCCTGCAAGTGTaGAGGAGGGTGAAAATATTT | + |
|
Preference number: 4 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHFGLQV*RRVKIF Trigger: AAATATTTTCACCCTCCTGCACACTTGCAGGCCAAA...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR GCA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGTTTGGCCTGCAAGTGTaGAGGAGGGTGAAAATATTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRSESYPSIQSGNEMFGLQV*RRVKIF Trigger: AAATATTTTCACCCTCCTGCACACTTGCAGGCCAAA...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | TACAATCGAACCTGCCCTTGGAATAGGTACTTAAAACTAAAGCTAACTGTTTATGAGCACGTTCCTCTCTaGTACTGTCTGCAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YNRTCPWNRYLKLKLTVYEHVPL*YCLQTS Trigger: GGAGGTCTGCAGACAGTACCAGAGAGGAACGTGCTC...ATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGAAAAGTGGGCACAGGATaGAGCGGCGTTCCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EMSILSGLSASAIVMEIRKVGTG*SGVPGN Trigger: GTTTCCAGGAACGCCGCTCCATCCTGTGCCCACTTT...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGACCGCATTTGTCCCTATaGTGGGACCTACAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRNEYIVWTFCISYSYGPHLSL*WDLQEK Trigger: CTTTTCCTGTAGGTCCCACCATAGGGACAAATGCGG...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CCA 90 bp | TACAATCGAACCTGCCCTTGGAATAGGTACTTAAAACTAAAGCTAACTGTTTATGCACAGTTTCCTCGCTaGAACTCCCTGCATACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YNRTCPWNRYLKLKLTVYAQFPR*NSLHTS Trigger: GGAGGTATGCAGGGAGTTCCAGCGAGGAAACTGTGC...ATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR TCA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGATTGAACAGCGGCCCTTaGGGGAATCAAAGCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EMSILSGLSASAIVMEIRLNSGP*GNQSRQ Trigger: TTGCCTGCTTTGATTCCCTCAAGGGCCGCTGTTCAA...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | TTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATTATTTCAGAATTATCTaGTTGGCTGTGGCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FYFTSLCCDCPSPQEVNHYFRII*LAVAVA Trigger: AGCAACAGCCACAGCCAATCAGATAATTCTGAAATA...ATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | TCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGAGGGTGAAAATATTTaGATTTCTCCCTCATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRSESYPSIQSGNEMEGENI*ISPSCN Trigger: GTTGCATGAGGGAGAAATGCAAATATTTTCACCCTC...CATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | AAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTTAGAGGGTGAAAATATTTaGATTTCTCCCTCATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KKTSSCMSSNITAGLRWLEGENI*ISPSCN Trigger: GTTGCATGAGGGAGAAATGCAAATATTTTCACCCTC...TAACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | GGACAGAAACTATGCTCAGAACCCTGTGAAAGAAAACCTCATCCTGTATGTCTTTTTGGCCTGCAAGTGTaGAGGAGGGTGAAAATATTT | + |
|
Preference number: 4 (lower is better) Translates to: GQKLCSEPCERKPHPVCLFGLQV*RRVKIF Trigger: AAATATTTTCACCCTCCTGCACACTTGCAGGCCAAA...AAGACATACAGGATGAGGTTTTCTTTCACAGGGTTCTGAGCATAGTTTCTGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR GCA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGAGAGGGTGAAAATATTTaGATTTCTCCCTCATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSLEELFGNRQPEGEFEREGENI*ISPSCN Trigger: GTTGCATGAGGGAGAAATGCAAATATTTTCACCCTC...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR CCA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAATGGAGCGGCGTTCCTaGAAACATAAATTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRNEYIVWTFCISYSYGMERRS*KHKLHL Trigger: CAGATGCAATTTATGTTTCCAGGAACGCCGCTCCAT...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGACCGCATTTGTCCCTATaGTGGGACCTACAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EMSILSGLSASAIVMEIRPHLSL*WDLQEK Trigger: CTTTTCCTGTAGGTCCCACCATAGGGACAAATGCGG...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGATTATCTGATTGGCTGTaGCTGTTGCTGCGAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EMSILSGLSASAIVMEIRLSDWL*LLLRRG Trigger: TCCCCTTCGCAGCAACAGCCACAGCCAATCAGATAA...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGACATTTGTCCCTATGGTaGGACCTACAGGAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EMSILSGLSASAIVMEIRHLSLW*DLQEKW Trigger: CCACTTTTCCTGTAGGTCCCACCATAGGGACAAATG...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CCA 90 bp | TACAATCGAACCTGCCCTTGGAATAGGTACTTAAAACTAAAGCTAACTGTTTATCATTTGTCCCTATGGTaGGACCTACAGGAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YNRTCPWNRYLKLKLTVYHLSLW*DLQEKW Trigger: CCACTTTTCCTGTAGGTCCCACCATAGGGACAAATG...ATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGACCAGTTTATCAGTCCTaGGAAGTTTCTGAGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EMSILSGLSASAIVMEIRPVYQS*EVSELQ Trigger: CTGCAACTCAGAAACTTCTCAGGACTGATAAACTGG...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR TCA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGATATTTCAGAATTATCTaGTTGGCTGTGGCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EMSILSGLSASAIVMEIRYFRII*LAVAVA Trigger: AGCAACAGCCACAGCCAATCAGATAATTCTGAAATA...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| 3UTR CAA 72 bp | AGAACTAAATTTAGCATGCAGTTTGTGGCAATTCTATaGAGGAGGAAACGGGGTAATATGTACAGTAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTKFSMQFVAIL*RRKRGNMYSNN Trigger: ATTGTTACTGTACATATTACCCCGTTTCCTCCTCAATAGAATTGCCACAAACTGCATGCTAAATTTAGTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCGCCACCGCGGCCTGGTaGGCTTGGTGCTGCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EAGVCFTSLLSAATVRLLATAAW*AWCCAA Trigger: AGCTGCGCAGCACCAAGCCAACCAGGCCGCGGTGGC...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTTGCAAGACGCTGGGGTaGAAGACCGTGCTGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPCKTLG*KTVLAP Trigger: CGGGGCCAGCACGGTCTTCAACCCCAGCGTCTTGCA...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTCGCGGCCTGGTTGGCTaGGTGCTGCGCAGCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPRGLVG*VLRSFD Trigger: ATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGCG...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS GCA 90 bp | TACGGTGTTGTCGTTTGTGTCGATCATGGTGCTGTCTGCCGGGTGTaGAAAGCGGCAGTCTGTCTCTCCCCGGGCACAGTTTCCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YGVVVCVDHGAVCRV*KAAVCLSPGTVSSL Trigger: CAGCGAGGAAACTGTGCCCGGGGAGAGACAGACTGCCGCTTTGCACACCCGGCAGACAGCACCATGATCGACACAAACGACAACACCGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS-3UTR CAA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCCGCGGCCTGGTTGGCTaGGTGCTGCGCAGCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EAGVCFTSLLSAATVRLLRGLVG*VLRSFD Trigger: ATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGCG...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGCCACCGCGGCCTGGTaGGCTTGGTGCTGCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AYVLLHFSLLRLSVSSRSATAAW*AWCCAA Trigger: AGCTGCGCAGCACCAAGCCAACCAGGCCGCGGTGGC...ACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS GCA 90 bp | ACAAACGGTTACGGTGTTGTCGTTTGTGTCGATCATGGTGCTGTCTaGCGGGTGTGCAAAGCGGCAGTCTGTCTCTCCCCGGGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TNGYGVVVCVDHGAV*RVCKAAVCLSPGTV Trigger: AACTGTGCCCGGGGAGAGACAGACTGCCGCTTTGCACACCCGGCAGACAGCACCATGATCGACACAAACGACAACACCGTAACCGTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS-3UTR CAA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCCCAGCGTCAGCCACTTaGTGTCTCTCACGGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EAGVCFTSLLSAATVRLLPASAT*CLSRGQ Trigger: TTGCCCCCGTGAGAGACACAAAGTGGCTGACGCTGG...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTGCCACCGCGGCCTGGTaGGCTTGGTGCTGCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGATAAW*AWCCAA Trigger: AGCTGCGCAGCACCAAGCCAACCAGGCCGCGGTGGC...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GCCACTCAGACTTTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCAAGACGCTGGGGTaGAAGACCGTGCTGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ATQTLDLRGRRMFYFTSLCKTLG*KTVLAP Trigger: CGGGGCCAGCACGGTCTTCAACCCCAGCGTCTTGCA...GAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS GCA 90 bp | AATCCATACAAACGGTTACGGTGTTGTCGTTTGTGTCGATCATGGTaGTGTCTGCCGGGTGTGCAAAGCGGCAGTCTGTCTCTCCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: NPYKRLRCCRLCRSW*CLPGVQSGSLSLPG Trigger: CCCGGGGAGAGACAGACTGCCGCTTTGCACACCCGGCAGACAGCACCATGATCGACACAAACGACAACACCGTAACCGTTTGTATGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS-3UTR CAA 90 bp | GATTCAGTGCGGCATCTCCTGGCAAAGCGAACCCCACACTCTGATGTGTCCCCTTGCGCAGCTTTGATTTaGGCCTGCAAGTGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DSVRHLLAKRTPHSDVSPCAALI*ACKCAG Trigger: TCCTGCACACTTGCAGGCCAAAATCAAAGCTGCGCA...AGGGGACACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | AACCGGAGGGCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGTGCAAGACGCTGGGGTaGAAGACCGTGCTGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: NRRASLKDQSLRFDYWHECKTLG*KTVLAP Trigger: CGGGGCCAGCACGGTCTTCAACCCCAGCGTCTTGCA...CTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGCCCTCCGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS TCA 90 bp | GCATACCTCCAGTTTATCAGTCCTGAGAAGTTTCTGAGTTGCAGTTaGGCCCGGGACAGTGACCGGTGGACTTCCGGGAACAATGACCGG | + |
|
Preference number: 5 (lower is better) Translates to: AYLQFISPEKFLSCS*ARDSDRWTSGNNDR Trigger: CCGGTCATTGTTCCCGGAAGTCCACCGGTCACTGTCCCGGGCTCAACTGCAACTCAGAAACTTCTCAGGACTGATAAACTGGAGGTATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS TCA 90 bp | TGGAACTCCCTGCATACCTCCAGTTTATCAGTCCTGAGAAGTTTCTaGGTTGCAGTTGAGCCCGGGACAGTGACCGGTGGACTTCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WNSLHTSSLSVLRSF*VAVEPGTVTGGLPG Trigger: TCCCGGAAGTCCACCGGTCACTGTCCCGGGCTCAACTGCAACTCAGAAACTTCTCAGGACTGATAAACTGGAGGTATGCAGGGAGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS-3UTR CAA 90 bp | ACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGACCAGCGTCAGCCACTTaGTGTCTCTCACGGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TSLCCDCPSPQEVNHTLRPASAT*CLSRGQ Trigger: TTGCCCCCGTGAGAGACACAAAGTGGCTGACGCTGG...TCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | CCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACTTTGGGTAGAACCTCTGTaGGGACTAACCCAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PHTLMCPLAIVLELPLRLWVEPL*GLTQLQ Trigger: CTGGAGTTGGGTTAGTCCCAACAGAGGTTCTACCCA...AAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGATGCGCAGCTTTGATTTaGGCCTGCAAGTGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EPHTLMCPLAIVLELPLRCAALI*ACKCAG Trigger: TCCTGCACACTTGCAGGCCAAAATCAAAGCTGCGCA...TCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTTGCAAGACGCTGGGGTaGAAGACCGTGCTGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGCKTLG*KTVLAP Trigger: CGGGGCCAGCACGGTCTTCAACCCCAGCGTCTTGCA...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCCTGCGAAGGGGACACTaGTTGCAGGAGTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EAGVCFTSLLSAATVRLLLRRGH*LQELLL Trigger: CAGCAACAACTCCTGCAACAAGTGTCCCCTTCGCAG...GAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGATTACGGTGTTGTCGTTaGTGTCGATCATGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EPHTLMCPLAIVLELPLRLRCCR*CRSWCC Trigger: ACAGCACCATGATCGACACAAACGACAACACCGTAA...TCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGTGGTGCTGCGCAGCTTaGATTTTGGCCTGCAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQWCCAA*ILACKC Trigger: ACACTTGCAGGCCAAAATCAAAGCTGCGCAGCACCA...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTAGGCCAGGTCTACAGTaGCTTCGAGAGGTCGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCRPGLQ*LREVAS Trigger: TGAAGCGACCTCTCGAAGCAACTGTAGACCTGGCCT...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GAACCCCACACTCTGATGTGTCCCCTGGCAATTGTGCTTGAGCTGCCACTCAGACAAGTGCTTGTCTCTTaGGTAAGGGATGAAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EPHTLMCPLAIVLELPLRQVLVS*VRDEEH Trigger: GTGCTCTTCATCCCTTACCAAAGAGACAAGCACTTG...TCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGCTGCGAAGGGGACACTaGTTGCAGGAGTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVCFTSLLSAATVRLLKKLRRGH*LQELLL Trigger: CAGCAACAACTCCTGCAACAAGTGTCCCCTTCGCAG...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | AAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTTACCAGCGTCAGCCACTTaGTGTCTCTCACGGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KKTSSCMSSNITAGLRWLPASAT*CLSRGQ Trigger: TTGCCCCCGTGAGAGACACAAAGTGGCTGACGCTGG...TAACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGCGCAGCTTTGATTTaGGCCTGCAAGTGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVCFTSLLSAATVRLLKKCAALI*ACKCAG Trigger: TCCTGCACACTTGCAGGCCAAAATCAAAGCTGCGCA...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGGTGCTGCGCAGCTTaGATTTTGGCCTGCAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GVCFTSLLSAATVRLLKKWCCAA*ILACKC Trigger: ACACTTGCAGGCCAAAATCAAAGCTGCGCAGCACCA...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GGTTGTGGTCTGTCCAGAAGAACTAAATTTAGCATGCAGTTTGTGGCAATTCTATGCAAGACGCTGGGGTaGAAGACCGTGCTGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GCGLSRRTKFSMQFVAILCKTLG*KTVLAP Trigger: CGGGGCCAGCACGGTCTTCAACCCCAGCGTCTTGCA...TAGAATTGCCACAAACTGCATGCTAAATTTAGTTCTTCTGGACAGACCACAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTCCAGCGTCAGCCACTTaGTGTCTCTCACGGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASLKDQSLRFDYWHEPFIPASAT*CLSRGQ Trigger: TTGCCCCCGTGAGAGACACAAAGTGGCTGACGCTGG...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR CAA 90 bp | GCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTTGGGTAGAACCTCTGTaGGGACTAACCCAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AYVLLHFSLLRLSVSSRSWVEPL*GLTQLQ Trigger: CTGGAGTTGGGTTAGTCCCAACAGAGGTTCTACCCA...ACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGAGCCACCGCGGCCTGGTaGGCTTGGTGCTGCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EMSILSGLSASAIVMEIRATAAW*AWCCAA Trigger: AGCTGCGCAGCACCAAGCCAACCAGGCCGCGGTGGC...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | TACAATCGAACCTGCCCTTGGAATAGGTACTTAAAACTAAAGCTAACTGTTTATGCCACCGCGGCCTGGTaGGCTTGGTGCTGCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YNRTCPWNRYLKLKLTVYATAAW*AWCCAA Trigger: AGCTGCGCAGCACCAAGCCAACCAGGCCGCGGTGGC...ATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | CCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGAGGCCAGGTCTACAGTaGCTTCGAGAGGTCGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPQEVNHTLRSSQEMKWRPGLQ*LREVAS Trigger: TGAAGCGACCTCTCGAAGCAACTGTAGACCTGGCCT...CCATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAACTGCGAAGGGGACACTaGTTGCAGGAGTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSVSSRSESYPSIQSGNELRRGH*LQELLL Trigger: CAGCAACAACTCCTGCAACAAGTGTCCCCTTCGCAG...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGCGCTGCTGCAGTTTTTaGCTGGATCAAATTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQRCCSF*LDQIVP Trigger: AGGAACAATTTGATCCAGCAAAAAACTGCAGCAGCG...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | ACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGACAAACGGTTACGGTGTaGTCGTTTGTGTCGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: TSLCCDCPSPQEVNHTLRQTVTV*SFVSIM Trigger: CATGATCGACACAAACGACAACACCGTAACCGTTTG...TCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGCAAACGGTTACGGTGTaGTCGTTTGTGTCGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: GVCFTSLLSAATVRLLKKQTVTV*SFVSIM Trigger: CATGATCGACACAAACGACAACACCGTAACCGTTTG...CTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAATGGTGCTGCGCAGCTTaGATTTTGGCCTGCAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSVSSRSESYPSIQSGNEWCCAA*ILACKC Trigger: ACACTTGCAGGCCAAAATCAAAGCTGCGCAGCACCA...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GCCACTCAGACTTTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCCAAGTGCTTGTCTCTTaGGTAAGGGATGAAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ATQTLDLRGRRMFYFTSLQVLVS*VRDEEH Trigger: GTGCTCTTCATCCCTTACCAAAGAGACAAGCACTTG...GAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | TTAGACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCGCTGCTGCAGTTTTTaGCTGGATCAAATTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LDLRGRRMFYFTSLCCDCRCCSF*LDQIVP Trigger: AGGAACAATTTGATCCAGCAAAAAACTGCAGCAGCG...ACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | CGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATCAAACGGTTACGGTGTaGTCGTTTGTGTCGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: RLSVSSRSESYPSIQSGNQTVTV*SFVSIM Trigger: CATGATCGACACAAACGACAACACCGTAACCGTTTG...ATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | AAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTTATGCGCAGCTTTGATTTaGGCCTGCAAGTGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KKTSSCMSSNITAGLRWLCAALI*ACKCAG Trigger: TCCTGCACACTTGCAGGCCAAAATCAAAGCTGCGCA...TAACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGAAGGCCAGGTCTACAGTaGCTTCGAGAGGTCGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSLEELFGNRQPEGEFERRPGLQ*LREVAS Trigger: TGAAGCGACCTCTCGAAGCAACTGTAGACCTGGCCT...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 |
||
| CDS-3UTR CAA 90 bp | GGAAATGAAATGGTTGTGATTGGAGTTACAATCGAACCTGCCCTTGGAATAGGTCTGCGAAGGGGACACTaGTTGCAGGAGTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GNEMVVIGVTIEPALGIGLRRGH*LQELLL Trigger: CAGCAACAACTCCTGCAACAAGTGTCCCCTTCGCAG...ACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCGAGGCAGGCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTTTTTGCTGGATCAAATaGTTCCTCCCATTAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TCEAGVCFTSLLSAATVRFCWIK*FLPLIS Trigger: AGAGATTAATGGGAGGAACAATTTGATCCAGCAAAA...ACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGCCTGCCTCGCAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GCGTATGTTTTACTTCACTTCTCTCTGCTGCGACTGTCCGTCTCCTCAAGAAGTCGCTGCTGCAGTTTTTaGCTGGATCAAATTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AYVLLHFSLLRLSVSSRSRCCSF*LDQIVP Trigger: AGGAACAATTTGATCCAGCAAAAAACTGCAGCAGCG...ACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GGAAATGAAATGGTTGTGATTGGAGTTACAATCGAACCTGCCCTTGGAATAGGTTGGGTAGAACCTCTGTaGGGACTAACCCAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GNEMVVIGVTIEPALGIGWVEPL*GLTQLQ Trigger: CTGGAGTTGGGTTAGTCCCAACAGAGGTTCTACCCA...ACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | CCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGTTACGGTGTTGTCGTTaGTGTCGATCATGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSPQEVNHTLRSSQEMKWLRCCR*CRSWCC Trigger: ACAGCACCATGATCGACACAAACGACAACACCGTAA...CCATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAACAAACGGTTACGGTGTaGTCGTTTGTGTCGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSVSSRSESYPSIQSGNEQTVTV*SFVSIM Trigger: CATGATCGACACAAACGACAACACCGTAACCGTTTG...TTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGACGCGGCCTGGTTGGCTaGGTGCTGCGCAGCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EMSILSGLSASAIVMEIRRGLVG*VLRSFD Trigger: ATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGCG...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTCAAGTGCTTGTCTCTTaGGTAAGGGATGAAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGQVLVS*VRDEEH Trigger: GTGCTCTTCATCCCTTACCAAAGAGACAAGCACTTG...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGACTTGAACAGCGGCCCTaGAGGGAATCAAAGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSRNEYIVWTFCISYSYGLEQRP*RESKQA Trigger: TGCCTGCTTTGATTCCCTCAAGGGCCGCTGTTCAAG...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGCGACTGTCCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGTTTTGCTGGATCAAATaGTTCCTCCCATTAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CCDCPSPQEVNHTLRSSQFCWIK*FLPLIS Trigger: AGAGATTAATGGGAGGAACAATTTGATCCAGCAAAA...CTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTCGCTGCTGCAGTTTTTaGCTGGATCAAATTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ERKPHPVCLRTSQLVSGGRCCSF*LDQIVP Trigger: AGGAACAATTTGATCCAGCAAAAAACTGCAGCAGCG...ACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | AAGAAAACCTCATCCTGTATGTCTTCGAACATCACAGCTGGTCTCAGGTGGTTACGCTGCTGCAGTTTTTaGCTGGATCAAATTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KKTSSCMSSNITAGLRWLRCCSF*LDQIVP Trigger: AGGAACAATTTGATCCAGCAAAAAACTGCAGCAGCG...TAACCACCTGAGACCAGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGTTTAGAAGAGTTATTCGGTAACAGGCAACCGGAGGGCGAGTTTGAAAGATTACGGTGTTGTCGTTaGTGTCGATCATGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSLEELFGNRQPEGEFERLRCCR*CRSWCC Trigger: ACAGCACCATGATCGACACAAACGACAACACCGTAA...TCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTTCTAAACTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR CAA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTTTACGGTGTTGTCGTTaGTGTCGATCATGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASLKDQSLRFDYWHEPFILRCCR*CRSWCC Trigger: ACAGCACCATGATCGACACAAACGACAACACCGTAA...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR CAA 90 bp | GCGAGTTTGAAAGACCAATCCCTTAGATTCGACTATTGGCATGAGCCTTTCATTCAAACGGTTACGGTGTaGTCGTTTGTGTCGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: ASLKDQSLRFDYWHEPFIQTVTV*SFVSIM Trigger: CATGATCGACACAAACGACAACACCGTAACCGTTTG...AATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGTCGAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGATGGTGCTGCGCAGCTTaGATTTTGGCCTGCAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSRNEYIVWTFCISYSYGWCCAA*ILACKC Trigger: ACACTTGCAGGCCAAAATCAAAGCTGCGCAGCACCA...TCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | GGAAATGAAATGGTTGTGATTGGAGTTACAATCGAACCTGCCCTTGGAATAGGTCAAGTGCTTGTCTCTTaGGTAAGGGATGAAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GNEMVVIGVTIEPALGIGQVLVS*VRDEEH Trigger: GTGCTCTTCATCCCTTACCAAAGAGACAAGCACTTG...ACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
||
| CDS-3UTR CAA 90 bp | CCGTCTCCTCAAGAAGTGAATCATACCCTTCGATCCAGTCAGGAAATGAAATGGTTTTGCTGGATCAAATaGTTCCTCCCATTAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSPQEVNHTLRSSQEMKWFCWIK*FLPLIS Trigger: AGAGATTAATGGGAGGAACAATTTGATCCAGCAAAA...CCATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | TACAATCGAACCTGCCCTTGGAATAGGTACTTAAAACTAAAGCTAACTGTTTATTGGGTAGAACCTCTGTaGGGACTAACCCAACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: YNRTCPWNRYLKLKLTVYWVEPL*GLTQLQ Trigger: CTGGAGTTGGGTTAGTCCCAACAGAGGTTCTACCCA...ATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGATGCGCAGCTTTGATTTaGGCCTGCAAGTGTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: EMSILSGLSASAIVMEIRCAALI*ACKCAG Trigger: TCCTGCACACTTGCAGGCCAAAATCAAAGCTGCGCA...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGATGGTGCTGCGCAGCTTaGATTTTGGCCTGCAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: EMSILSGLSASAIVMEIRWCCAA*ILACKC Trigger: ACACTTGCAGGCCAAAATCAAAGCTGCGCAGCACCA...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | CTATTTTTCCATGCTGCAGTTACTTACAACCCTTTAATCCAACTCTTAAAATGCCAAGTGCTTGTCTCTTaGGTAAGGGATGAAGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: LFFHAAVTYNPLIQLLKCQVLVS*VRDEEH Trigger: GTGCTCTTCATCCCTTACCAAAGAGACAAGCACTTG...GCATTTTAAGAGTTGGATTAAAGGGTTGTAAGTAACTGCAGCATGGAAAAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 |
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| CDS-3UTR CAA 90 bp | GGTTGTGGTCTGTCCAGAAGAACTAAATTTAGCATGCAGTTTGTGGCAATTCTATTTTGCTGGATCAAATaGTTCCTCCCATTAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: GCGLSRRTKFSMQFVAILFCWIK*FLPLIS Trigger: AGAGATTAATGGGAGGAACAATTTGATCCAGCAAAA...TAGAATTGCCACAAACTGCATGCTAAATTTAGTTCTTCTGGACAGACCACAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS-3UTR CAA 90 bp | GAAATGAGTATATTGTCTGGACTTTCTGCATCAGCTATAGTTATGGAGATAAGATTTTGCTGGATCAAATaGTTCCTCCCATTAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: EMSILSGLSASAIVMEIRFCWIK*FLPLIS Trigger: AGAGATTAATGGGAGGAACAATTTGATCCAGCAAAA...TCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS CAA 72 bp | CGCGGCTGCCTGGGCGGCCACCGCGGCCTGGTTGGCTaGGTGCTGCGCAGCTTTGATTTTGGCCTGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: RGCLGGHRGLVG*VLRSFDFGLQV Trigger: CACTTGCAGGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGCGGTGGCCGCCCAGGCAGCCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS CCA 72 bp | GCGGCTGCCTGGGCGGCCACCGCGGCCTGGTTGGCTTaGTGCTGCGCAGCTTTGATTTTGGCCTGCAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: AAAWAATAAWLA*CCAALILACKC Trigger: ACACTTGCAGGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGCGGTGGCCGCCCAGGCAGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS GCA 72 bp | GTCGTTTGTGTCGATCATGGTGCTGTCTGCCGGGTGTaGAAAGCGGCAGTCTGTCTCTCCCCGGGCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: VVCVDHGAVCRV*KAAVCLSPGTV Trigger: AACTGTGCCCGGGGAGAGACAGACTGCCGCTTTGCACACCCGGCAGACAGCACCATGATCGACACAAACGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS GCA 72 bp | TACGGTGTTGTCGTTTGTGTCGATCATGGTGCTGTCTaGCGGGTGTGCAAAGCGGCAGTCTGTCTCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: YGVVVCVDHGAV*RVCKAAVCLSP Trigger: CGGGGAGAGACAGACTGCCGCTTTGCACACCCGGCAGACAGCACCATGATCGACACAAACGACAACACCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS CCA 72 bp | CGGCAGTCTGTCTCTCCCCGGGCACAGTTTCCTCGCTaGAACTCCCTGCATACCTCCAGTTTATCAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RQSVSPRAQFPR*NSLHTSSLSVL Trigger: CAGGACTGATAAACTGGAGGTATGCAGGGAGTTCCAGCGAGGAAACTGTGCCCGGGGAGAGACAGACTGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS GCA 72 bp | TGCTGCGAAGGGGACACTTGTTGCAGGAGTTGTTGCTaGAGAGACAGTGGCGGACGTAGCGCTGTGCATCAT | + |
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Preference number: 6 (lower is better) Translates to: CCEGDTCCRSCC*RDSGGRSAVHH Trigger: ATGATGCACAGCGCTACGTCCGCCACTGTCTCTGCAGCAACAACTCCTGCAACAAGTGTCCCCTTCGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS GCA 72 bp | TGTTGCTGCGAAGGGGACACTTGTTGCAGGAGTTGTTaGTGCAGAGACAGTGGCGGACGTAGCGCTGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: CCCEGDTCCRSC*CRDSGGRSAVH Trigger: ATGCACAGCGCTACGTCCGCCACTGTCTCTGCAGCAACAACTCCTGCAACAAGTGTCCCCTTCGCAGCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 |
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| CDS TCA 72 bp | CAGTTTATCAGTCCTGAGAAGTTTCTGAGTTGCAGTTaGGCCCGGGACAGTGACCGGTGGACTTCCGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: QFISPEKFLSCS*ARDSDRWTSGN Trigger: GTTCCCGGAAGTCCACCGGTCACTGTCCCGGGCTCAACTGCAACTCAGAAACTTCTCAGGACTGATAAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS GCA 72 bp | AAACGGTTACGGTGTTGTCGTTTGTGTCGATCATGGTaGTGTCTGCCGGGTGTGCAAAGCGGCAGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: KRLRCCRLCRSW*CLPGVQSGSLS Trigger: AGACAGACTGCCGCTTTGCACACCCGGCAGACAGCACCATGATCGACACAAACGACAACACCGTAACCGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS TCA 72 bp | CTGCATACCTCCAGTTTATCAGTCCTGAGAAGTTTCTaGGTTGCAGTTGAGCCCGGGACAGTGACCGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LHTSSLSVLRSF*VAVEPGTVTGG Trigger: TCCACCGGTCACTGTCCCGGGCTCAACTGCAACTCAGAAACTTCTCAGGACTGATAAACTGGAGGTATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS TCA 72 bp | GCTGGAACTCCCTGCATACCTCCAGTTTATCAGTCCTaGGAAGTTTCTGAGTTGCAGTTGAGCCCGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: AGTPCIPPVYQS*EVSELQLSPGQ Trigger: CTGTCCCGGGCTCAACTGCAACTCAGAAACTTCTCAGGACTGATAAACTGGAGGTATGCAGGGAGTTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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| CDS CCA 72 bp | TACAGGAAAAGTGGGCACAGGATGGAGCGGCGTTCCTaGAAACATAAATTGCATCTGCTGGGCAAGCATCGC | + |
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Preference number: 6 (lower is better) Translates to: YRKSGHRMERRS*KHKLHLLGKHR Trigger: GCGATGCTTGCCCAGCAGATGCAATTTATGTTTCCAGGAACGCCGCTCCATCCTGTGCCCACTTTTCCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000088419.13 ENSMUST00000167459.3 ENSMUST00000226800.2 ENSMUST00000227012.2 ENSMUST00000227594.2 ENSMUST00000228115.2 |
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