RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MBNL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027763

Ensembl transcript IDs: ENSMUST00000099087.8, ENSMUST00000191747.6, ENSMUST00000192607.6, ENSMUST00000192757.6, ENSMUST00000192807.6, ENSMUST00000193517.6, ENSMUST00000193518.6, ENSMUST00000193647.6, ENSMUST00000194069.6, ENSMUST00000194201.6, ENSMUST00000195077.6, ENSMUST00000195817.3

Found 773 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCCAGCTGCAGTaGCAGCTGGGCAACCAAGTCATTAAACAAGTGGCCATTGTCACA +
Preference number: 1 (lower is better)
Translates to: GGWVAGKCNISSQLQ*QLGNQVIKQVAIVT
Trigger: TGTGACAATGGCCACTTGTTTAATGACTTGGTTGCCCAGCTGTCACTGCAGCTGGCTACTGATGTTGCACTTACCAGCAACCCACCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR TCA 90 bp TCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTGTTTaGAGGGTATGGAGTGCTAACTCTGTGCCACTTTTGCAAGCAATT +
Preference number: 1 (lower is better)
Translates to: SWQTTSCPQKAKRRV*RVWSANSVPLLQAI
Trigger: AATTGCTTGCAAAAGTGGCACAGAGTTAGCACTCCATACCCTTCAAACACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR CCA 90 bp GATTTGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATaGCAAATCTTTCCAGCTGAAAAATCCTGGCAAACTACAAGCTGT +
Preference number: 1 (lower is better)
Translates to: DLAQWSFVSHEILEG*QIFPAEKSWQTTSC
Trigger: ACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGGAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR CCA 90 bp TTCAGGCAGATTTGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTaGAAGGATGGCAAATCTTTCCAGCTGAAAAATCCTGGCAAACTA +
Preference number: 1 (lower is better)
Translates to: FRQIWPNGVLSVMRS*KDGKSFQLKNPGKL
Trigger: TAGTTTGCCAGGATTTTTCAGCTGGAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCAAATCTGCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR GCA 90 bp TACTTAAAGCCATGGTGTGCTTTAAAATATACACAGTTGTGGTTTTaGTTGGCACATTCATCTGTCAGTTCCCTCCCTCACCATGTCGTA +
Preference number: 1 (lower is better)
Translates to: YLKPWCALKYTQLWF*LAHSSVSSLPHHVV
Trigger: TACGACATGGTGAGGGAGGGAACTGACAGATGAATGTGCCAAGCAAAACCACAACTGTGTATATTTTAAAGCACACCATGGCTTTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR GCA 90 bp ATGCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTaGTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTC +
Preference number: 1 (lower is better)
Translates to: MQYVDVLWLRDFCMC*LTVYTIWLMTSSLL
Trigger: GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR GCA 90 bp GTGCAAAAAGTCAACCTTCTCTCTAGACTTTCCAACATGCTAAATTaGAGCATCATCAACCCTCAAGAGTTTGCACACACGCTAAAATTC +
Preference number: 1 (lower is better)
Translates to: VQKVNLLSRLSNMLN*SIINPQEFAHTLKF
Trigger: GAATTTTAGCGTGTGTGCAAACTCTTGAGGGTTGATGATGCTGCAATTTAGCATGTTGGAAAGTCTAGAGAGAAGGTTGACTTTTTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR CCA 90 bp ATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTaGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATA +
Preference number: 1 (lower is better)
Translates to: MLSFLLVNMQYVDVL*LRDFCMCCLTVYTI
Trigger: TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp GTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCAGCTGCAGTGACAGCTaGGCAACCAAGTCATTAAAC +
Preference number: 2 (lower is better)
Translates to: VLSADEGGWVAGKCNISSSCSDS*ATKSLN
Trigger: GTTTAATGACTTGGTTGCCCAGCTGTCACTGCAGCT...GCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR-3UTR CCA 90 bp ACTGTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCTGCAGTGACAGCTaGGCAACCAAGTCATTAAAC +
Preference number: 2 (lower is better)
Translates to: TVLSADEGGWVAGKCNISSCSDS*ATKSLN
Trigger: GTTTAATGACTTGGTTGCCCAGCTGTCACTGCAGCT...ACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR-3UTR GCA 90 bp CTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCCAGTCCAACATGCTAAATTaGAGCATCATCAACCCTCAA +
Preference number: 2 (lower is better)
Translates to: LSADEGGWVAGKCNISSQSNMLN*SIINPQ
Trigger: TTGAGGGTTGATGATGCTGCAATTTAGCATGTTGGA...CTGGCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR-3UTR CCA 90 bp ACTGTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTATCTTCAGGCAGATTTaGCCCAATGGAGTTTTGTCA +
Preference number: 2 (lower is better)
Translates to: TVLSADEGGWVAGKCNISIFRQI*PNGVLS
Trigger: TGACAAAACTCCATTGGGCCAAATCTGCCTGAAGAT...ACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR-3UTR CCA 90 bp GTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCTACAGGTGTGCTGTTTaGTTTGCCTGTTTATGGTTA +
Preference number: 2 (lower is better)
Translates to: VLSADEGGWVAGKCNISSYRCAV*FACLWL
Trigger: TAACCATAAACAGGCAAACCAAACAGCACACCTGTA...GCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR-3UTR TCA 90 bp CTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCCAGCAGGTTTCTCTCTTTTaGCTATATACAGAAGTGCAA +
Preference number: 2 (lower is better)
Translates to: LSADEGGWVAGKCNISSQQVSLF*LYTEVQ
Trigger: TTGCACTTCTGTATATAGTCAAAAGAGAGAAACCTG...CTGGCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR-3UTR TCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCCCTTTCCTCTTTGTATaGTTGTTTTGTGACGACAGC +
Preference number: 2 (lower is better)
Translates to: NDSACALSALTAILNTRCPFLFV*LFCDDS
Trigger: GCTGTCGTCACAAAACAATCATACAAAGAGGAAAGG...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCTGGATGTCTTGTGGCTaGGGGATTTTTGTATGTGTT +
Preference number: 2 (lower is better)
Translates to: NDSACALSALTAILNTRCWMSCG*GIFVCV
Trigger: AACACATACAAAAATCCCTCAGCCACAAGACATCCA...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTATGGTGCCCTTTGATTaGTTAGTACTAGCAAATAAG +
Preference number: 2 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFMVPFD*LVLANK
Trigger: CTTATTTGCTAGTACTAATCAATCAAAGGGCACCAT...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp ACTGTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTATACAAGGTGCACCTTaGTTACTTGTAAACCTTGAA +
Preference number: 2 (lower is better)
Translates to: TVLSADEGGWVAGKCNISIQGAP*LLVNLE
Trigger: TTCAAGGTTTACAAGTAACCAAGGTGCACCTTGTAT...ACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR-3UTR CCA 90 bp ACTGTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTGAATCCTTAACAACATaGTACTTAAAGCCATGGTGT +
Preference number: 2 (lower is better)
Translates to: TVLSADEGGWVAGKCNISESLTT*YLKPWC
Trigger: ACACCATGGCTTTAAGTACCATGTTGTTAAGGATTC...ACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR-3UTR CCA 90 bp GTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCAAGTCATTAAACAAGTaGCCATTGTCACATTTTGCT +
Preference number: 2 (lower is better)
Translates to: VLSADEGGWVAGKCNISSKSLNK*PLSHFA
Trigger: AGCAAAATGTGACAATGGCCACTTGTTTAATGACTT...GCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR CAA 90 bp CTTCAGGCAGATTTGGCCCAATGGAGTTTTGTCAGTCATGAGATCTaGGAAGGATGGCAAATCTTTCCAGCTGAAAAATCCTGGCAAACT +
Preference number: 2 (lower is better)
Translates to: LQADLAQWSFVSHEI*EGWQIFPAEKSWQT
Trigger: AGTTTGCCAGGATTTTTCAGCTGGAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCAAATCTGCCTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR TCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTCCTTTCCTCTTTGTATaGTTGTTTTGTGACGACAGC +
Preference number: 2 (lower is better)
Translates to: ALSALTAILNTRCTLVTCPFLFV*LFCDDS
Trigger: GCTGTCGTCACAAAACAATCATACAAAGAGGAAAGG...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTTGGATGTCTTGTGGCTaGGGGATTTTTGTATGTGTT +
Preference number: 2 (lower is better)
Translates to: ALSALTAILNTRCTLVTCWMSCG*GIFVCV
Trigger: AACACATACAAAAATCCCTCAGCCACAAGACATCCA...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCAGCACAAATACCAACTaGATGTACAAAGTGTGTAGG +
Preference number: 2 (lower is better)
Translates to: NDSACALSALTAILNTRCSTNTN*MYKVCR
Trigger: CCTACACACTTTGTACATTCAGTTGGTATTTGTGCT...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR GCA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTCAACCCTCAAGAGTTTaGACACACGCTAAAATTCTC +
Preference number: 2 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRQPSRV*THAKIL
Trigger: GAGAATTTTAGCGTGTGTGCAAACTCTTGAGGGTTG...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGTATGTGGATGTCTTGTaGCTGAGGGATTTTTGTATG +
Preference number: 2 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLYVDVL*LRDFCM
Trigger: CATACAAAAATCCCTCAGCCACAAGACATCCACATA...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR CAA 90 bp GTACTTAAAGCCATGGTGTGCTTTAAAATATACACAGTTGTGGTTTaGCTTGGCACATTCATCTGTCAGTTCCCTCCCTCACCATGTCGT +
Preference number: 2 (lower is better)
Translates to: VLKAMVCFKIYTVVV*LGTFICQFPPSPCR
Trigger: ACGACATGGTGAGGGAGGGAACTGACAGATGAATGTGCCAAGCAAAACCACAACTGTGTATATTTTAAAGCACACCATGGCTTTAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCTTTGTATGTGTTGCTTaGCGGTATATACAATATGGC +
Preference number: 2 (lower is better)
Translates to: NDSACALSALTAILNTRCFVCVA*RYIQYG
Trigger: GCCATATTGTATATACCGTCAAGCAACACATACAAA...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR GCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCGTCTGCCAGGATTGTTaGCATAGCAACAACTTAACT +
Preference number: 2 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFVCQDC*HSNNLT
Trigger: AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR GCA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTTATTACTCAATTGTCTaGCAGGATTGTTGCCATAGC +
Preference number: 2 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRYYSIV*QDCCHS
Trigger: GCTATGGCAACAATCCTGGCAGACAATTGAGTAATA...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTTATGTGGATGTCTTGTaGCTGAGGGATTTTTGTATG +
Preference number: 2 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRYVDVL*LRDFCM
Trigger: CATACAAAAATCCCTCAGCCACAAGACATCCACATA...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCATACAAGGTGCACCTTaGTTACTTGTAAACCTTGAA +
Preference number: 2 (lower is better)
Translates to: NDSACALSALTAILNTRCIQGAP*LLVNLE
Trigger: TTCAAGGTTTACAAGTAACCAAGGTGCACCTTGTAT...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR CAA 90 bp TTAAAGCCATGGTGTGCTTTAAAATATACACAGTTGTGGTTTTGCTaGGCACATTCATCTGTCAGTTCCCTCCCTCACCATGTCGTACAA +
Preference number: 2 (lower is better)
Translates to: LKPWCALKYTQLWFC*AHSSVSSLPHHVVQ
Trigger: TTGTACGACATGGTGAGGGAGGGAACTGACAGATGAATGTGCCAAGCAAAACCACAACTGTGTATATTTTAAAGCACACCATGGCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR CAA 90 bp ACAACATGGTACTTAAAGCCATGGTGTGCTTTAAAATATACACAGTaGTGGTTTTGCTTGGCACATTCATCTGTCAGTTCCCTCCCTCAC +
Preference number: 2 (lower is better)
Translates to: TTWYLKPWCALKYTQ*WFCLAHSSVSSLPH
Trigger: GTGAGGGAGGGAACTGACAGATGAATGTGCCAAGCAAAACCACAACTGTGTATATTTTAAAGCACACCATGGCTTTAAGTACCATGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATACGGTATATACAATATaGCTAATGACGTCGTCCTTA +
Preference number: 2 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNTVYTI*LMTSSL
Trigger: TAAGGACGACGTCATTAGCCATATTGTATATACCGT...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATACAAGGTGCACCTTaGTTACTTGTAAACCTTGAA +
Preference number: 2 (lower is better)
Translates to: ILLSNKNDSACALSALTAIQGAP*LLVNLE
Trigger: TTCAAGGTTTACAAGTAACCAAGGTGCACCTTGTAT...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTCCTTTCCTCTTTGTATaGTTGTTTTGTGACGACAGC +
Preference number: 2 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTPFLFV*LFCDDS
Trigger: GCTGTCGTCACAAAACAATCATACAAAGAGGAAAGG...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCCCTTTCCTCTTTGTATaGTTGTTTTGTGACGACAGC +
Preference number: 2 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLPFLFV*LFCDDS
Trigger: GCTGTCGTCACAAAACAATCATACAAAGAGGAAAGG...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCTTTGTATGTGTTGCTTaGCGGTATATACAATATGGC +
Preference number: 2 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFFVCVA*RYIQYG
Trigger: GCCATATTGTATATACCGTCAAGCAACACATACAAA...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR TCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGCACAAATACCAACTaGATGTACAAAGTGTGTAGG +
Preference number: 2 (lower is better)
Translates to: NKNDSACALSALTAILNTSTNTN*MYKVCR
Trigger: CCTACACACTTTGTACATTCAGTTGGTATTTGTGCT...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCACGGTATATACAATATaGCTAATGACGTCGTCCTTA +
Preference number: 2 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFTVYTI*LMTSSL
Trigger: TAAGGACGACGTCATTAGCCATATTGTATATACCGT...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCTATGTGGATGTCTTGTaGCTGAGGGATTTTTGTATG +
Preference number: 2 (lower is better)
Translates to: AILELLNRAKIAFPSCNIYVDVL*LRDFCM
Trigger: CATACAAAAATCCCTCAGCCACAAGACATCCACATA...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR TCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGCCTTTCCTCTTTGTATaGTTGTTTTGTGACGACAGC +
Preference number: 2 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSPFLFV*LFCDDS
Trigger: GCTGTCGTCACAAAACAATCATACAAAGAGGAAAGG...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACATTTGTATGTGTTGCTTaGCGGTATATACAATATGGC +
Preference number: 2 (lower is better)
Translates to: NKNDSACALSALTAILNTFVCVA*RYIQYG
Trigger: GCCATATTGTATATACCGTCAAGCAACACATACAAA...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCAAGAATGGTGCCCTTTaGTTGATTAGTACTAGCAAA +
Preference number: 2 (lower is better)
Translates to: AILELLNRAKIAFPSCNIKNGAL*LISTSK
Trigger: TTTGCTAGTACTAATCAATCAAAGGGCACCATTCTT...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR TCA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCAAAGGTTATCTGTATTaGGTTTGTGTTGTGCTGTCT +
Preference number: 2 (lower is better)
Translates to: AILELLNRAKIAFPSCNIKGYLY*VCVVLS
Trigger: AGACAGCACAACACAAACTCAATACAGATAACCTTT...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR TCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTTGTATGATTGTTTTGTaGCGACAGCTCTACATCTGG +
Preference number: 2 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLCMIVL*RQLYIW
Trigger: CCAGATGTAGAGCTGTCGTCACAAAACAATCATACA...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000192607.6
ENSMUST00000194069.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTTGTATGATTGTTTTGTaGCGACAGCTCTACATCTGG +
Preference number: 2 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTCMIVL*RQLYIW
Trigger: CCAGATGTAGAGCTGTCGTCACAAAACAATCATACA...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000192607.6
ENSMUST00000194069.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAACGGTATATACAATATaGCTAATGACGTCGTCCTTA +
Preference number: 2 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTTVYTI*LMTSSL
Trigger: TAAGGACGACGTCATTAGCCATATTGTATATACCGT...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCACGGTATATACAATATaGCTAATGACGTCGTCCTTA +
Preference number: 2 (lower is better)
Translates to: AILELLNRAKIAFPSCNITVYTI*LMTSSL
Trigger: TAAGGACGACGTCATTAGCCATATTGTATATACCGT...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACATGTTGTCGTTTCTTCTaGTTAACATGCAATATGTGG +
Preference number: 2 (lower is better)
Translates to: NKNDSACALSALTAILNTCCRFF*LTCNMW
Trigger: CCACATATTGCATGTTAACCAGAAGAAACGACAACA...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR CAA 90 bp ATGCATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTaGAATGTGACTGTGATGAAGCGTTTAAGCAAACGTGAACCCATT +
Preference number: 2 (lower is better)
Translates to: MHLMTVLFSLFRVTI*NVTVMKRLSKREPI
Trigger: AATGGGTTCACGTTTGCTTAAACGCTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR TCA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCTTTGTATGTGTTGCTTaGCGGTATATACAATATGGC +
Preference number: 2 (lower is better)
Translates to: DRNITSAQIPTECTKCVGFVCVA*RYIQYG
Trigger: GCCATATTGTATATACCGTCAAGCAACACATACAAA...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR TCA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTAGCACAAATACCAACTaGATGTACAAAGTGTGTAGG +
Preference number: 2 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMISTNTN*MYKVCR
Trigger: CCTACACACTTTGTACATTCAGTTGGTATTTGTGCT...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR TCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGGTCTATGGCACTTCATaGGAATCCTTAACAACATGG +
Preference number: 2 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKVYGTS*ESLTTW
Trigger: CCATGTTGTTAAGGATTCTCATGAAGTGCCATAGAC...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR GCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACATTCTTCTGGTTAACATaGAATATGTGGATGTCTTGT +
Preference number: 2 (lower is better)
Translates to: NKNDSACALSALTAILNTFFWLT*NMWMSC
Trigger: ACAAGACATCCACATATTGCATGTTAACCAGAAGAA...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR GCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGACACAGTTGTGGTTTTaGTTGGCACATTCATCTGTC +
Preference number: 2 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKTQLWF*LAHSSV
Trigger: GACAGATGAATGTGCCAAGCAAAACCACAACTGTGT...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCTATGTGGATGTCTTGTaGCTGAGGGATTTTTGTATG +
Preference number: 2 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLYVDVL*LRDFCM
Trigger: CATACAAAAATCCCTCAGCCACAAGACATCCACATA...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCAAATATACACAGTTGTaGTTTTGCTTGGCACATTCA +
Preference number: 2 (lower is better)
Translates to: AILELLNRAKIAFPSCNIKYTQL*FCLAHS
Trigger: TGAATGTGCCAAGCAAAACCACAACTGTGTATATTT...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR TCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTGGATGTCTTGTGGCTaGGGGATTTTTGTATGTGTT +
Preference number: 2 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTWMSCG*GIFVCV
Trigger: AACACATACAAAAATCCCTCAGCCACAAGACATCCA...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR TCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTAGCACAAATACCAACTaGATGTACAAAGTGTGTAGG +
Preference number: 2 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSSTNTN*MYKVCR
Trigger: CCTACACACTTTGTACATTCAGTTGGTATTTGTGCT...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR GCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTCTTCTGGTTAACATaGAATATGTGGATGTCTTGT +
Preference number: 2 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSFFWLT*NMWMSC
Trigger: ACAAGACATCCACATATTGCATGTTAACCAGAAGAA...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACTACATAATAGAATCATaGTCACACCATAGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHYIIES*SHHSLS
Trigger: AGACAGACTATGGTGTGACCATGATTCTATTATGTA...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACAAATATACACAGTTGTaGTTTTGCTTGGCACATTCA +
Preference number: 2 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHKYTQL*FCLAHS
Trigger: TGAATGTGCCAAGCAAAACCACAACTGTGTATATTT...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR GCA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCTTCTTCTGGTTAACATaGAATATGTGGATGTCTTGT +
Preference number: 2 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLFFWLT*NMWMSC
Trigger: ACAAGACATCCACATATTGCATGTTAACCAGAAGAA...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATTATGTGGATGTCTTGTaGCTGAGGGATTTTTGTATG +
Preference number: 2 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDYVDVL*LRDFCM
Trigger: CATACAAAAATCCCTCAGCCACAAGACATCCACATA...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGTGTTGTCGTTTCTTCTaGTTAACATGCAATATGTGG +
Preference number: 2 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKCCRFF*LTCNMW
Trigger: CCACATATTGCATGTTAACCAGAAGAAACGACAACA...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTATACAAGGTGCACCTTaGTTACTTGTAAACCTTGAA +
Preference number: 2 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTIQGAP*LLVNLE
Trigger: TTCAAGGTTTACAAGTAACCAAGGTGCACCTTGTAT...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTCGATTGAAATTACATTaGTATGGGTTCCAACCCGTA +
Preference number: 2 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTRLKLH*YGFQPV
Trigger: TACGGGTTGGAACCCATACCAATGTAATTTCAATCG...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATACGGTATATACAATATaGCTAATGACGTCGTCCTTA +
Preference number: 2 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNTVYTI*LMTSSL
Trigger: TAAGGACGACGTCATTAGCCATATTGTATATACCGT...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATTGTTGTCGTTTCTTCTaGTTAACATGCAATATGTGG +
Preference number: 2 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDCCRFF*LTCNMW
Trigger: CCACATATTGCATGTTAACCAGAAGAAACGACAACA...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTATGTTGTCGTTTCTTCTaGTTAACATGCAATATGTGG +
Preference number: 2 (lower is better)
Translates to: LDRNITSAQIPTECTKCVCCRFF*LTCNMW
Trigger: CCACATATTGCATGTTAACCAGAAGAAACGACAACA...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTATACAAGGTGCACCTTaGTTACTTGTAAACCTTGAA +
Preference number: 2 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTIQGAP*LLVNLE
Trigger: TTCAAGGTTTACAAGTAACCAAGGTGCACCTTGTAT...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR GCA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATTCTTCTGGTTAACATaGAATATGTGGATGTCTTGT +
Preference number: 2 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPFFWLT*NMWMSC
Trigger: ACAAGACATCCACATATTGCATGTTAACCAGAAGAA...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
34% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR CCA 72 bp ACCAAGCTCACTGTCCTTTCGGCAGATGAAGGTGGGTaGGTTGCTGGTAAGTGCAACATCAGTAGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: TKLTVLSADEGG*VAGKCNISSQL
Trigger: CAGCTGGCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGACAGTGAGCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR CCA 72 bp CACTTCTCCCATTCCACACTAGAACTGCCAGTGACCTaGCCCCTACTCAGCGATTTTAGAACTGCTGAACAG +
Preference number: 3 (lower is better)
Translates to: HFSHSTLELPVT*PLLSDFRTAEQ
Trigger: CTGTTCAGCAGTTCTAAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTCAGCAGGTTCCCATGTaGTCGTTTCTTCTGGTTAAC +
Preference number: 3 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFQQVPM*SFLLVN
Trigger: GTTAACCAGAAGAAACGACAACATGGGAACCTGCTG...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTCAGCAGGTTCCCATGTaGTCGTTTCTTCTGGTTAAC +
Preference number: 3 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGQQVPM*SFLLVN
Trigger: GTTAACCAGAAGAAACGACAACATGGGAACCTGCTG...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTCAATATGTGGATGTCTaGTGGCTGAGGGATTTTTGT +
Preference number: 3 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFQYVDV*WLRDFC
Trigger: ACAAAAATCCCTCAGCCACAAGACATCCACATATTG...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTTACACAGTTGTGGTTTaGCTTGGCACATTCATCTGT +
Preference number: 3 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFYTVVV*LGTFIC
Trigger: ACAGATGAATGTGCCAAGCAAAACCACAACTGTGTA...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp GTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCGAAAGGTTATCTGTATaGAGTTTGTGTTGTGCTGTC +
Preference number: 3 (lower is better)
Translates to: VLSADEGGWVAGKCNISSERLSV*SLCCAV
Trigger: GACAGCACAACACAAACTCAATACAGATAACCTTTC...GCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR-3UTR CAA 90 bp GTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCAGTACCTGCTATTTTTaGGTAATGATCTTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: VLSADEGGWVAGKCNISSSTCYF*VMIFRQ
Trigger: CTGCCTGAAGATCATTACCAAAAAATAGCAGGTACT...GCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR-3UTR CAA 90 bp GTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCACTCTCTTAACACGATaGAAATTACATTGGTATGGG +
Preference number: 3 (lower is better)
Translates to: VLSADEGGWVAGKCNISSTLLTR*KLHWYG
Trigger: CCCATACCAATGTAATTTCAATCGTGTTAAGAGAGT...GCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR TCA 72 bp ACTACAAGCTGTCCACAAAAAGCAAAGCGACGTGTTTaGAGGGTATGGAGTGCTAACTCTGTGCCACTTTTG +
Preference number: 3 (lower is better)
Translates to: TTSCPQKAKRRV*RVWSANSVPLL
Trigger: CAAAAGTGGCACAGAGTTAGCACTCCATACCCTTCAAACACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAGTGGCTGAGGGATTTTaGTATGTGTTGCTTGACGGT +
Preference number: 3 (lower is better)
Translates to: NKNDSACALSALTAILNTVAEGF*YVLLDG
Trigger: ACCGTCAAGCAACACATACAAAAATCCCTCAGCCAC...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTCAATATGTGGATGTCTaGTGGCTGAGGGATTTTTGT +
Preference number: 3 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRQYVDV*WLRDFC
Trigger: ACAAAAATCCCTCAGCCACAAGACATCCACATATTG...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCCAGCAGGTTCCCATGTaGTCGTTTCTTCTGGTTAAC +
Preference number: 3 (lower is better)
Translates to: AILELLNRAKIAFPSCNIQQVPM*SFLLVN
Trigger: GTTAACCAGAAGAAACGACAACATGGGAACCTGCTG...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTACGATTGAAATTACATaGGTATGGGTTCCAACCCGT +
Preference number: 3 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRTIEIT*VWVPTR
Trigger: ACGGGTTGGAACCCATACCAATGTAATTTCAATCGT...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTACTGTCCTTTCCTCTTaGTATGATTGTTTTGTGACG +
Preference number: 3 (lower is better)
Translates to: ALSALTAILNTRCTLVTCTVLSS*YDCFVT
Trigger: CGTCACAAAACAATCATACAAAGAGGAAAGGACAGT...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTGTGGCTGAGGGATTTTaGTATGTGTTGCTTGACGGT +
Preference number: 3 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSVAEGF*YVLLDG
Trigger: ACCGTCAAGCAACACATACAAAAATCCCTCAGCCAC...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCCAGTTGTGGTTTTGCTaGGCACATTCATCTGTCAGT +
Preference number: 3 (lower is better)
Translates to: AILELLNRAKIAFPSCNIQLWFC*AHSSVS
Trigger: ACTGACAGATGAATGTGCCAAGCAAAACCACAACTG...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCTTCCAACATGCTAAATaGCAGCATCATCAACCCTCA +
Preference number: 3 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFFQHAK*QHHQPS
Trigger: TGAGGGTTGATGATGCTGCAATTTAGCATGTTGGAA...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR GCA 72 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTaGTTGACGGTATATACAATATGGCTAATGACGTCG +
Preference number: 3 (lower is better)
Translates to: VDVLWLRDFCMC*LTVYTIWLMTS
Trigger: CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTACTGTCCTTTCCTCTTaGTATGATTGTTTTGTGACG +
Preference number: 3 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGTVLSS*YDCFVT
Trigger: CGTCACAAAACAATCATACAAAGAGGAAAGGACAGT...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCGTGGCTGAGGGATTTTaGTATGTGTTGCTTGACGGT +
Preference number: 3 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLVAEGF*YVLLDG
Trigger: ACCGTCAAGCAACACATACAAAAATCCCTCAGCCAC...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTCAGCAGGTTCCCATGTaGTCGTTTCTTCTGGTTAAC +
Preference number: 3 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMIQQVPM*SFLLVN
Trigger: GTTAACCAGAAGAAACGACAACATGGGAACCTGCTG...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCCAGCAGGTTCCCATGTaGTCGTTTCTTCTGGTTAAC +
Preference number: 3 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLQQVPM*SFLLVN
Trigger: GTTAACCAGAAGAAACGACAACATGGGAACCTGCTG...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTACAGGTTTCTCTCTTTaGACTATATACAGAAGTGCA +
Preference number: 3 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRTGFSL*TIYRSA
Trigger: TGCACTTCTGTATATAGTCAAAAGAGAGAAACCTGT...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAACTGTCCTTTCCTCTTaGTATGATTGTTTTGTGACG +
Preference number: 3 (lower is better)
Translates to: NKNDSACALSALTAILNTTVLSS*YDCFVT
Trigger: CGTCACAAAACAATCATACAAAGAGGAAAGGACAGT...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATGTGGCTGAGGGATTTTaGTATGTGTTGCTTGACGGT +
Preference number: 3 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNVAEGF*YVLLDG
Trigger: ACCGTCAAGCAACACATACAAAAATCCCTCAGCCAC...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTACAGCAGGTTCCCATGTaGTCGTTTCTTCTGGTTAAC +
Preference number: 3 (lower is better)
Translates to: LDRNITSAQIPTECTKCVQQVPM*SFLLVN
Trigger: GTTAACCAGAAGAAACGACAACATGGGAACCTGCTG...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTACGATTGAAATTACATaGGTATGGGTTCCAACCCGT +
Preference number: 3 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMITIEIT*VWVPTR
Trigger: ACGGGTTGGAACCCATACCAATGTAATTTCAATCGT...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR CCA 72 bp TTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTaGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTA +
Preference number: 3 (lower is better)
Translates to: FLLVNMQYVDVL*LRDFCMCCLTV
Trigger: TACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGCATGTTAACCAGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR CCA 72 bp CTTGGTCTACAGACGTACCAATACATAATAGAATCATaGTCACACCATAGTCTGTCTTTTCAAGATGGCATG +
Preference number: 3 (lower is better)
Translates to: LGLQTYQYIIES*SHHSLSFQDGM
Trigger: CATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTTACACAGTTGTGGTTTaGCTTGGCACATTCATCTGT +
Preference number: 3 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTYTVVV*LGTFIC
Trigger: ACAGATGAATGTGCCAAGCAAAACCACAACTGTGTA...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACTACTGTAAAGTTAAATaGGCCATTTCTGAGACAGCT +
Preference number: 3 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHYCKVK*AISETA
Trigger: AGCTGTCTCAGAAATGGCCAATTTAACTTTACAGTA...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTACTGTCCTTTCCTCTTaGTATGATTGTTTTGTGACG +
Preference number: 3 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTTVLSS*YDCFVT
Trigger: CGTCACAAAACAATCATACAAAGAGGAAAGGACAGT...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATCAATATGTGGATGTCTaGTGGCTGAGGGATTTTTGT +
Preference number: 3 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDQYVDV*WLRDFC
Trigger: ACAAAAATCCCTCAGCCACAAGACATCCACATATTG...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTACGATTGAAATTACATaGGTATGGGTTCCAACCCGT +
Preference number: 3 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTTIEIT*VWVPTR
Trigger: ACGGGTTGGAACCCATACCAATGTAATTTCAATCGT...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCAACTGTCCTTTCCTCTTaGTATGATTGTTTTGTGACG +
Preference number: 3 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPTVLSS*YDCFVT
Trigger: CGTCACAAAACAATCATACAAAGAGGAAAGGACAGT...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR-3UTR CAA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGTACTGTAAAGTTAAATaGGCCATTTCTGAGACAGCT +
Preference number: 3 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKYCKVK*AISETA
Trigger: AGCTGTCTCAGAAATGGCCAATTTAACTTTACAGTA...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTGTATTGAGTTTGTGTaGTGCTGTCTATTGTTACTG +
Preference number: 3 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTCIEFV*CCLLLL
Trigger: CAGTAACAATAGACAGCACAACACAAACTCAATACA...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR-3UTR CAA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTACTCTCTTAACACGATaGAAATTACATTGGTATGGG +
Preference number: 3 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTTLLTR*KLHWYG
Trigger: CCCATACCAATGTAATTTCAATCGTGTTAAGAGAGT...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR TCA 72 bp CATAATTTTAAGCCACTACAAGCAGAAAGTAAGTTGTaGTTACATAATCGTAAAACCAAGCTCACTGTCCTT +
Preference number: 3 (lower is better)
Translates to: HNFKPLQAESKL*LHNRKTKLTVL
Trigger: AAGGACAGTGAGCTTGGTTTTACGATTATGTAATCACAACTTACTTTCTGCTTGTAGTGGCTTAAAATTATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR GCA 72 bp TCATCAAAATATTACTCAATTGTCTGCCAGGATTGTTaGCATAGCAACAACTTAACTTCTTACTTAGCAATG +
Preference number: 3 (lower is better)
Translates to: SSKYYSIVCQDC*HSNNLTSYLAM
Trigger: CATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp CTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCCAGGCTGGCGTAGCACCGTaGACCATGGGAACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSADEGGWVAGKCNISSQAGVAP*TMGTGG
Trigger: CCCACCAGTTCCCATGGTGCACGGTGCTACGCCAGC...CTGGCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193517.6
CDS-3UTR TCA 90 bp CTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCCAGCTCCAGGATTCCCCGTaGCCAACATTGGTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LSADEGGWVAGKCNISSQLQDSP*PTLVQS
Trigger: CGACTGCACCAATGTTGGTCACGGGGAATCCTGGAG...CTGGCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCGGCAGCTGCAGTAGCTaGAGCCTGTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NDSACALSALTAILNTRCGSCSS*SLCCCS
Trigger: GCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCC...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTCTGAGTCATGGCAGCTaGAGTAGCTGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFLSHGS*SSCSLC
Trigger: GCACAGGCTGCAGCTACTGCAGCTGCCATGACTCAG...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194069.6
3UTR CAA 72 bp AGCTCACTGTCCTTTCGGCAGATGAAGGTGGGTGGGTaGCTGGTAAGTGCAACATCAGTAGCCAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSLSFRQMKVGG*LVSATSVASCS
Trigger: ACTGCAGCTGGCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGACAGTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR TCA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGCTGCTGCAGCCTGGTTaGCCTGGTATTGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLLLQPG*PGIGQP
Trigger: AGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAG...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTGGGGGAAGTACAGCTTaGGGAATTCCCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFGGSTA*GIPMAA
Trigger: AGCTGCCATGGGAATTCCTCAAGCTGTACTTCCCCC...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGCTTCTGTGCAGCAGCTaGGGCAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: ILLSNKNDSACALSALTALLCSS*GSCWHW
Trigger: CCAGTGCCAGCAGCTGCCGCAGCTGCTGCACAGAAG...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTAGTAGCTGCAGCCTGTaGTGCTGCAGCCTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGSSCSL*CCSLVD
Trigger: GTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACT...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTGGCAGCTGCAGTAGCTaGAGCCTGTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRGSCSS*SLCCCS
Trigger: GCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCC...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp ACTGTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTTGTGGCAGATGTTGTTaGTGCGGACACAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TVLSADEGGWVAGKCNISCGRCC*CGHSGW
Trigger: CCAGCCACTGTGTCCGCAGCAACAACATCTGCCACA...ACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
CDS-3UTR GCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATGCTGGCGTAGCACCGTaGACCATGGGAACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNAGVAP*TMGTGG
Trigger: CCCACCAGTTCCCATGGTGCACGGTGCTACGCCAGC...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTGGGGGAAGTACAGCTTaGGGAATTCCCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGGGSTA*GIPMAA
Trigger: AGCTGCCATGGGAATTCCTCAAGCTGTACTTCCCCC...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTGAGGGGTCGCTTCAGTaGTTTGACAGCCGACTGAGT +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGEGSLQ*FDSRLS
Trigger: ACTCAGTCGGCTGTCAAATCACTGAAGCGACCCCTC...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR TCA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTGGGGGAAGTACAGCTTaGGGAATTCCCAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFGGSTA*GIPRSK
Trigger: CTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCC...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGAC +
Preference number: 4 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFLLCCN*HAGTLD
Trigger: GTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAG...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCGCCTTGATCTTGGCTTaGAGGTGTGCGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: NDSACALSALTAILNTRCALILA*RCAGGW
Trigger: CCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGC...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGTGCTGGAACCAGGCTTaGGGAAACAGGCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLCWNQA*GNRPQV
Trigger: TACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCA...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTCGGCAAGATCTCTGCTaGAACCAGGCTTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGRQDLC*NQAWGN
Trigger: GTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCG...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTTTGCAATTGCCACGCTaGTACTCTCGACACACCTCC +
Preference number: 4 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFLQLPR*YSRHTS
Trigger: GGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAA...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR TCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCGGTATTGGGCAGCCTTaGTCTTGGCTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: NDSACALSALTAILNTRCGIGQP*SWLAGV
Trigger: CACACCTGCAAGCCAAGATCAAGGCTGCCCAATACC...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATCTTCTGTGCAGCAGCTaGGGCAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYLLCSS*GSCWHW
Trigger: CCAGTGCCAGCAGCTGCCGCAGCTGCTGCACAGAAG...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGAC +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGLLCCN*HAGTLD
Trigger: GTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAG...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATGCCTTGATCTTGGCTTaGAGGTGTGCGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNALILA*RCAGGW
Trigger: CCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGC...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCAGCTGCAGCCTGTGCTaGTGCAGCCTGGTTGACCTG +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFSCSLC*CSLVDL
Trigger: CAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCT...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGGCAGCTGCAGTAGCTaGAGCCTGTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYGSCSS*SLCCCS
Trigger: GCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCC...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAGGCAGCTGCAGTAGCTaGAGCCTGTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTGSCSS*SLCCCS
Trigger: GCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCC...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACGGCAGCTGCAGTAGCTaGAGCCTGTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYGSCSS*SLCCCS
Trigger: GCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCC...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGAATTCCCATGGCAGCTaGAGTAGCTGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLNSHGS*SSCSLC
Trigger: GCACAGGCTGCAGCTACTGCAGCTGCCATGGGAATT...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTGCTAACTGCATTTGCTaGGCCAGCATGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGANCIC*ASMAMF
Trigger: GAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGC...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCCGGCAAGATCTCTGCTaGAACCAGGCTTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: NDSACALSALTAILNTRCRQDLC*NQAWGN
Trigger: GTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCG...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCCCCCGTGACCAACATTaGTGCAGTCGGCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: NDSACALSALTAILNTRCPRDQH*CSRQDL
Trigger: GAGATCTTGCCGACTGCACCAATGTTGGTCACGGGG...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGAGCTGCGGCAGCTGCTaGCACTGGAACTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: ILLSNKNDSACALSALTASCGSC*HWNSRI
Trigger: AATCCTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCT...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATAGCTGCGGCAGCTGCTaGCACTGGAACTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNSCGSC*HWNSRI
Trigger: AATCCTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCT...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTTGCAATTGCCACGCTaGTACTCTCGACACACCTCC +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGLQLPR*YSRHTS
Trigger: GGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAA...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGTTCCGTGTCTGGTCGTaGGCAAGTCCCCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLFRVWS*ASPPLK
Trigger: TTTCAAAGGGGGACTTGCTCACGACCAGACACGGAA...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGGGTATTGGGCAGCCTTaGTCTTGGCTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWGIGQP*SWLAGV
Trigger: CACACCTGCAAGCCAAGATCAAGGCTGCCCAATACC...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATCTGCTGCAGCCTGGTTaGCCTGGTATTGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYLLQPG*PGIGQP
Trigger: AGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAG...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGGGGGAAGTACAGCTTaGGGAATTCCCAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLGGSTA*GIPRSK
Trigger: CTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCC...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTAGTCGGCAAGATCTCTaGTGGAACCAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ALSALTAILNTRCTLVTCSRQDL*WNQAWG
Trigger: TCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACT...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGAGTCGGCAAGATCTCTaGTGGAACCAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWSRQDL*WNQAWG
Trigger: TCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACT...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCCTTCTGTGCAGCAGCTaGGGCAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLILLCSS*GSCWHW
Trigger: CCAGTGCCAGCAGCTGCCGCAGCTGCTGCACAGAAG...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCCTTCTGTGCAGCAGCTaGGGCAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLLLCSS*GSCWHW
Trigger: CCAGTGCCAGCAGCTGCCGCAGCTGCTGCACAGAAG...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTCTTGGCTTGCAGGTGTaGGGGAGGATGGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGLGLQV*GRMEVF
Trigger: AAATACTTCCATCCTCCCGCACACCTGCAAGCCAAG...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATAGCTGCAGCCTGTGCTaGTGCAGCCTGGTTGACCTG +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYSCSLC*CSLVDL
Trigger: CAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCT...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTAGTAGCTGCAGCCTGTaGTGCTGCAGCCTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGSSCSL*CCSLVD
Trigger: GTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACT...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGGGCAGCTGCAGTAGCTaGAGCCTGTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWGSCSS*SLCCCS
Trigger: GCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCC...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTAATTCCCATGGCAGCTaGAGTAGCTGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: ALSALTAILNTRCTLVTCNSHGS*SSCSLC
Trigger: GCACAGGCTGCAGCTACTGCAGCTGCCATGGGAATT...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp CTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCCAGGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: LSADEGGWVAGKCNISSQGRNAV*CCNCML
Trigger: CAACATGCAGTTACAGCAGCATACAGCATTTCTCCC...CTGGCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGGCTGGCGTAGCACCGTaGACCATGGGAACAACACTT +
Preference number: 4 (lower is better)
Translates to: ILLSNKNDSACALSALTAAGVAP*TMGTTL
Trigger: AAGTGTTGTTCCCATGGTGCACGGTGCTACGCCAGC...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
CDS-3UTR GCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCGGCAGATGTTGTTGCTaGGGACACAGTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFGRCCC*GHSGWR
Trigger: ACGCCAGCCACTGTGTCCGCAGCAACAACATCTGCC...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGTGTGGCAGATGTTGTTaGTGCGGACACAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWCGRCC*CGHSGW
Trigger: CCAGCCACTGTGTCCGCAGCAACAACATCTGCCACA...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCTGCTGGAACCAGGCTTaGGGAAACAGGCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFCWNQA*GNRPQV
Trigger: TACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCA...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTCGGCAAGATCTCTGCTaGAACCAGGCTTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: ALSALTAILNTRCTLVTCRQDLC*NQAWGN
Trigger: GTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCG...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGCCCCGTGACCAACATTaGTGCAGTCGGCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWPRDQH*CSRQDL
Trigger: GAGATCTTGCCGACTGCACCAATGTTGGTCACGGGG...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTGCAGCCTGGTTGACCTaGTATTGGGCAGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRAAWLT*YWAALI
Trigger: GATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGC...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGTGTGCTGCTGCAGCCTaGTTGACCTGGTATTGGGCA +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWCAAAA*LTWYWA
Trigger: TGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACA...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTTGTGCTGCTGCAGCCTaGTTGACCTGGTATTGGGCA +
Preference number: 4 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRCAAAA*LTWYWA
Trigger: TGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACA...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGTTCCGTGTCTGGTCGTaGGCAAGTCCCCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWFRVWS*ASPPLK
Trigger: TTTCAAAGGGGGACTTGCTCACGACCAGACACGGAA...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTTTCCGTGTCTGGTCGTaGGCAAGTCCCCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: ALSALTAILNTRCTLVTCFRVWS*ASPPLK
Trigger: TTTCAAAGGGGGACTTGCTCACGACCAGACACGGAA...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTGGTATTGGGCAGCCTTaGTCTTGGCTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGGIGQP*SWLAGV
Trigger: CACACCTGCAAGCCAAGATCAAGGCTGCCCAATACC...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCCTGCTGCAGCCTGGTTaGCCTGGTATTGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLILLQPG*PGIGQP
Trigger: AGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAG...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTTTGGCTAACTGCATTTaGTGGGCCAGCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: ALSALTAILNTRCTLVTCLANCI*WASMAM
Trigger: CATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAA...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCAGTCGGCAAGATCTCTaGTGGAACCAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFSRQDL*WNQAWG
Trigger: TCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACT...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTCGTGACCAACATTGGTaGAGTCGGCAAGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALSALTAILNTRCTLVTCRDQHW*SRQDLC
Trigger: GCAGAGATCTTGCCGACTGCACCAATGTTGGTCACG...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGCTTCTGTGCAGCAGCTaGGGCAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSLLCSS*GSCWHW
Trigger: CCAGTGCCAGCAGCTGCCGCAGCTGCTGCACAGAAG...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACTGCAGCCTGTGCTGCTaGAGCCTGGTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYCSLCC*SLVDLV
Trigger: TACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCA...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACATGCAGCCTGTGCTGCTaGAGCCTGGTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTCSLCC*SLVDLV
Trigger: TACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCA...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACAGCTGCAGCCTGTGCTaGTGCAGCCTGGTTGACCTG +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHSCSLC*CSLVDL
Trigger: CAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCT...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTAGCTGCAGCCTGTGCTaGTGCAGCCTGGTTGACCTG +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTSCSLC*CSLVDL
Trigger: CAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCT...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGTAGCTGCAGCCTGTaGTGCTGCAGCCTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTSSCSL*CCSLVD
Trigger: GTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACT...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTGGCAGCTGCAGTAGCTaGAGCCTGTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTGSCSS*SLCCCS
Trigger: GCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCC...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGVCCCN*MLARAC
Trigger: ACAGGCTCTAGCCAACATGCAGTTACAGCAGCATAC...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCATG +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGVCCCN*MLARAM
Trigger: CATGGCTCTAGCCAACATGCAGTTACAGCAGCATAC...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000191747.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGCGGGCATCATGGCATTaGCTAACTGCATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILLSNKNDSACALSALTARASWH*LTAFAG
Trigger: CCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCG...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGCTGCTGATGCACTGGTaGCTAAGCTTGGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: ILLSNKNDSACALSALTALLMHW*LSLVQL
Trigger: CAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCAG...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACATGCTGGAACCAGGCTTaGGGAAACAGGCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTCWNQA*GNRPQV
Trigger: TACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCA...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTCCCCGTGACCAACATTaGTGCAGTCGGCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGPRDQH*CSRQDL
Trigger: GAGATCTTGCCGACTGCACCAATGTTGGTCACGGGG...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGAAGAGCAGGCCTCTTTaGCAATGGGGGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: ILLSNKNDSACALSALTAKSRPL*QWGKYS
Trigger: GCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTT...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTGTATCTGGTTGGCTGTaGCTGTTGCAGCGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: ALSALTAILNTRCTLVTCVSGWL*LLQRRE
Trigger: TTCCCTTCGCTGCAACAGCCACAGCCAACCAGATAC...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCGCAACGACCTTTCAGTaGATCAAAGCAGGCGATTAC +
Preference number: 4 (lower is better)
Translates to: NDSACALSALTAILNTRCATTFQ*IKAGDY
Trigger: GTAATCGCCTGCTTTGATTCACTGAAAGGTCGTTGC...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGCCATGTTCTTCTGCTaGATCAAGTTATTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLAMFFC*IKLFRP
Trigger: TGGGCGGAATAACTTGATTCAGCAGAAGAACATGGC...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACCTCCAGGATTCCCCGTaGCCAACATTGGTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHLQDSP*PTLVQS
Trigger: CGACTGCACCAATGTTGGTCACGGGGAATCCTGGAG...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR TCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTCTCCAGGATTCCCCGTaGCCAACATTGGTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSLQDSP*PTLVQS
Trigger: CGACTGCACCAATGTTGGTCACGGGGAATCCTGGAG...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAGGTATTGGGCAGCCTTaGTCTTGGCTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTGIGQP*SWLAGV
Trigger: CACACCTGCAAGCCAAGATCAAGGCTGCCCAATACC...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTGCTGCAGCCTGGTTaGCCTGGTATTGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTLLQPG*PGIGQP
Trigger: AGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAG...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTCTGCTGCAGCCTGGTTaGCCTGGTATTGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMILLQPG*PGIGQP
Trigger: AGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAG...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTTTGGCTAACTGCATTTaGTGGGCCAGCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGLANCI*WASMAM
Trigger: CATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAA...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTATGGCATTGGCTAACTaGATTTGCTGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: ALSALTAILNTRCTLVTCMALAN*ICWASM
Trigger: CATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCAT...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGGCATTGGCTAACTaGATTTGCTGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNMALAN*ICWASM
Trigger: CATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCAT...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTATGGCATTGGCTAACTaGATTTGCTGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRMALAN*ICWASM
Trigger: CATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCAT...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATAGTCGGCAAGATCTCTaGTGGAACCAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYSRQDL*WNQAWG
Trigger: TCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACT...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGTCGGCAAGATCTCTaGTGGAACCAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTSRQDL*WNQAWG
Trigger: TCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACT...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTTCTGTGCAGCAGCTaGGGCAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSLLCSS*GSCWHW
Trigger: CCAGTGCCAGCAGCTGCCGCAGCTGCTGCACAGAAG...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGAC +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFLLCCN*HAGTLD
Trigger: GTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAG...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGCTTGGCTTGCAGGTGTaGGGGAGGATGGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWLGLQV*GRMEVF
Trigger: AAATACTTCCATCCTCCCGCACACCTGCAAGCCAAG...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGCCTTGATCTTGGCTTaGAGGTGTGCGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTALILA*RCAGGW
Trigger: CCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGC...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTGCCTTGATCTTGGCTTaGAGGTGTGCGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: RFPCCRFFWLTCNMWMSCALILA*RCAGGW
Trigger: CCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGC...ACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTTGCAGCCTGTGCTGCTaGAGCCTGGTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTCSLCC*SLVDLV
Trigger: TACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCA...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTTGCAGCCTGTGCTGCTaGAGCCTGGTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: RFPCCRFFWLTCNMWMSCCSLCC*SLVDLV
Trigger: TACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCA...ACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGTGCAGCCTGTGCTGCTaGAGCCTGGTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWCSLCC*SLVDLV
Trigger: TACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCA...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTAGCTGCAGCCTGTGCTaGTGCAGCCTGGTTGACCTG +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTSCSLC*CSLVDL
Trigger: CAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCT...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTAGCTGCAGCCTGTGCTaGTGCAGCCTGGTTGACCTG +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLSCSLC*CSLVDL
Trigger: CAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCT...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGAGTAGCTGCAGCCTGTaGTGCTGCAGCCTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWSSCSL*CCSLVD
Trigger: GTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACT...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCAGTAGCTGCAGCCTGTaGTGCTGCAGCCTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLSSCSL*CCSLVD
Trigger: GTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACT...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTAGTAGCTGCAGCCTGTaGTGCTGCAGCCTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTSSCSL*CCSLVD
Trigger: GTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACT...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTAGTAGCTGCAGCCTGTaGTGCTGCAGCCTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSSSCSL*CCSLVD
Trigger: GTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACT...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACAGTAGCTGCAGCCTGTaGTGCTGCAGCCTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHSSCSL*CCSLVD
Trigger: GTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACT...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGGGCAGCTGCAGTAGCTaGAGCCTGTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKGSCSS*SLCCCS
Trigger: GCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCC...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTGGCAGCTGCAGTAGCTaGAGCCTGTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSGSCSS*SLCCCS
Trigger: GCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCC...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCGGCAGATGTTGTTGCTaGGGACACAGTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLIGRCCC*GHSGWR
Trigger: ACGCCAGCCACTGTGTCCGCAGCAACAACATCTGCC...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGGGCAGATGTTGTTGCTaGGGACACAGTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWGRCCC*GHSGWR
Trigger: ACGCCAGCCACTGTGTCCGCAGCAACAACATCTGCC...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACTGTGGCAGATGTTGTTaGTGCGGACACAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYCGRCC*CGHSGW
Trigger: CCAGCCACTGTGTCCGCAGCAACAACATCTGCCACA...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCCTGAGTCATGGCAGCTaGAGTAGCTGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLLSHGS*SSCSLC
Trigger: GCACAGGCTGCAGCTACTGCAGCTGCCATGACTCAG...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTATTTGCAGTTCTCTCTaGAGCAACGACCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGICSSL*SNDLSV
Trigger: CACTGAAAGGTCGTTGCTCCAGAGAGAACTGCAAAT...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACTGCTGGAACCAGGCTTaGGGAAACAGGCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHCWNQA*GNRPQV
Trigger: TACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCA...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTTGCTGGAACCAGGCTTaGGGAAACAGGCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTCWNQA*GNRPQV
Trigger: TACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCA...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATCCCCGTGACCAACATTaGTGCAGTCGGCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYPRDQH*CSRQDL
Trigger: GAGATCTTGCCGACTGCACCAATGTTGGTCACGGGG...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTAGCTGCGGCAGCTGCTaGCACTGGAACTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSSCGSC*HWNSRI
Trigger: AATCCTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCT...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAGCTGCGGCAGCTGCTaGCACTGGAACTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLISCGSC*HWNSRI
Trigger: AATCCTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCT...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCTTGCAATTGCCACGCTaGTACTCTCGACACACCTCC +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFLQLPR*YSRHTS
Trigger: GGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAA...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCAGGTGTGCGGGAGGATaGAAGTATTTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: NDSACALSALTAILNTRCRCAGG*KYLHFS
Trigger: GGAAAAGTGCAAATACTTCCATCCTCCCGCACACCT...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTTGGTTGACCTGGTATTaGGCAGCCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRWLTWY*AALILA
Trigger: AGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCA...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGCAGCCTGGTTGACCTaGTATTGGGCAGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYAAWLT*YWAALI
Trigger: GATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGC...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACATGTGCTGCTGCAGCCTaGTTGACCTGGTATTGGGCA +
Preference number: 4 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTCAAAA*LTWYWA
Trigger: TGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACA...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGTTATGGGTATCTGGTTaGCTGTGGCTGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWLWVSG*LWLLQR
Trigger: TCGCTGCAACAGCCACAGCCAACCAGATACCCATAA...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTGGGTAACATACTTGTaGCTAGTCAGATGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGWVTYL*LVRCSA
Trigger: TGCCGAACATCTGACTAGCCACAAGTATGTTACCCA...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATGCCATGTTCTTCTGCTaGATCAAGTTATTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNAMFFC*IKLFRP
Trigger: TGGGCGGAATAACTTGATTCAGCAGAAGAACATGGC...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACCTCCAGGATTCCCCGTaGCCAACATTGGTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDLQDSP*PTLVQS
Trigger: CGACTGCACCAATGTTGGTCACGGGGAATCCTGGAG...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTACTCCAGGATTCCCCGTaGCCAACATTGGTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLLQDSP*PTLVQS
Trigger: CGACTGCACCAATGTTGGTCACGGGGAATCCTGGAG...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGGGTATTGGGCAGCCTTaGTCTTGGCTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWGIGQP*SWLAGV
Trigger: CACACCTGCAAGCCAAGATCAAGGCTGCCCAATACC...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCGGTATTGGGCAGCCTTaGTCTTGGCTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLIGIGQP*SWLAGV
Trigger: CACACCTGCAAGCCAAGATCAAGGCTGCCCAATACC...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGCTGCAGCCTGGTTaGCCTGGTATTGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSLLQPG*PGIGQP
Trigger: AGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAG...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCGGGGGAAGTACAGCTTaGGGAATTCCCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLIGGSTA*GIPMAA
Trigger: AGCTGCCATGGGAATTCCTCAAGCTGTACTTCCCCC...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp AGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTGGGGGAAGTACAGCTTaGGGAATTCCCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RFPCCRFFWLTCNMWMSCGGSTA*GIPMAA
Trigger: AGCTGCCATGGGAATTCCTCAAGCTGTACTTCCCCC...ACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATTGTCATGCACAATATTaGGCCTGGTGGGAGAAATGC +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNCHAQY*AWWEKC
Trigger: GCATTTCTCCCACCAGGCTCAATATTGTGCATGACA...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATGGCATTGGCTAACTaGATTTGCTGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGMALAN*ICWASM
Trigger: CATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCAT...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTAGTCGGCAAGATCTCTaGTGGAACCAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSSRQDL*WNQAWG
Trigger: TCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACT...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACCGTGACCAACATTGGTaGAGTCGGCAAGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYRDQHW*SRQDLC
Trigger: GCAGAGATCTTGCCGACTGCACCAATGTTGGTCACG...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTCTTCTGTGCAGCAGCTaGGGCAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTLLCSS*GSCWHW
Trigger: CCAGTGCCAGCAGCTGCCGCAGCTGCTGCACAGAAG...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCTGCAGCCTGTGCTGCTaGAGCCTGGTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLCSLCC*SLVDLV
Trigger: TACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCA...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TCTTTGTATGATTGTTTTGTGACGACAGCTCTACATCTGGGTAACATACTTGTGTGCAGCCTGTGCTGCTaGAGCCTGGTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: SLYDCFVTTALHLGNILVCSLCC*SLVDLV
Trigger: TACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCA...CACAAGTATGTTACCCAGATGTAGAGCTGTCGTCACAAAACAATCATACAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000192607.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTAGCTGCAGCCTGTGCTaGTGCAGCCTGGTTGACCTG +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSSCSLC*CSLVDL
Trigger: CAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCT...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCAATTCCCATGGCAGCTaGAGTAGCTGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: DRNITSAQIPTECTKCVGNSHGS*SSCSLC
Trigger: GCACAGGCTGCAGCTACTGCAGCTGCCATGGGAATT...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACAATTCCCATGGCAGCTaGAGTAGCTGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHNSHGS*SSCSLC
Trigger: GCACAGGCTGCAGCTACTGCAGCTGCCATGGGAATT...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGACCAGTGTTAAAGACTaGGGTGGCACCGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWTSVKD*GGTVGF
Trigger: AAAACCAACGGTGCCACCGCAGTCTTTAACACTGGT...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWVCCCN*MLARAC
Trigger: ACAGGCTCTAGCCAACATGCAGTTACAGCAGCATAC...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLGRNAV*CCNCML
Trigger: CAACATGCAGTTACAGCAGCATACAGCATTTCTCCC...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTGCTGGCGTAGCACCGTaGACCATGGGAACAACACTT +
Preference number: 4 (lower is better)
Translates to: RFPCCRFFWLTCNMWMSCAGVAP*TMGTTL
Trigger: AAGTGTTGTTCCCATGGTGCACGGTGCTACGCCAGC...ACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193518.6
CDS-3UTR GCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTGGCAGATGTTGTTGCTaGGGACACAGTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTGRCCC*GHSGWR
Trigger: ACGCCAGCCACTGTGTCCGCAGCAACAACATCTGCC...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTTGTGGCAGATGTTGTTaGTGCGGACACAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTCGRCC*CGHSGW
Trigger: CCAGCCACTGTGTCCGCAGCAACAACATCTGCCACA...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACACGGGCATCATGGCATTaGCTAACTGCATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTRASWH*LTAFAG
Trigger: CCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCG...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCCTGCTGATGCACTGGTaGCTAAGCTTGGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: AILELLNRAKIAFPSCNILLMHW*LSLVQL
Trigger: CAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCAG...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGCTGCTGATGCACTaGTGGCTAAGCTTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTRLLMH*WLSLVQ
Trigger: TTGCACCAAGCTTAGCCACCAGTGCATCAGCAGCCT...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACTGCTGGAACCAGGCTTaGGGAAACAGGCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDCWNQA*GNRPQV
Trigger: TACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCA...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTTGCTGGAACCAGGCTTaGGGAAACAGGCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTCWNQA*GNRPQV
Trigger: TACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCA...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTCGGCAAGATCTCTGCTaGAACCAGGCTTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTRQDLC*NQAWGN
Trigger: GTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCG...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATAAGCTGCGGCAGCTGCTaGCACTGGAACTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTISCGSC*HWNSRI
Trigger: AATCCTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCT...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCAGCTGCGGCAGCTGCTaGCACTGGAACTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLSCGSC*HWNSRI
Trigger: AATCCTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCT...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACATTGCAATTGCCACGCTaGTACTCTCGACACACCTCC +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTLQLPR*YSRHTS
Trigger: GGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAA...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACATTGCAATTGCCACGCTaGTACTCTCGACACACCTCC +
Preference number: 4 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTLQLPR*YSRHTS
Trigger: GGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAA...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGAGGTGTGCGGGAGGATaGAAGTATTTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: ILLSNKNDSACALSALTARCAGG*KYLHFS
Trigger: GGAAAAGTGCAAATACTTCCATCCTCCCGCACACCT...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTAGGTGTGCGGGAGGATaGAAGTATTTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRRCAGG*KYLHFS
Trigger: GGAAAAGTGCAAATACTTCCATCCTCCCGCACACCT...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGAGGTGTGCGGGAGGATaGAAGTATTTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWRCAGG*KYLHFS
Trigger: GGAAAAGTGCAAATACTTCCATCCTCCCGCACACCT...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTAGGTGTGCGGGAGGATaGAAGTATTTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: ALSALTAILNTRCTLVTCRCAGG*KYLHFS
Trigger: GGAAAAGTGCAAATACTTCCATCCTCCCGCACACCT...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCTGGTTGACCTGGTATTaGGCAGCCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFWLTWY*AALILA
Trigger: AGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCA...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTGCAGCCTGGTTGACCTaGTATTGGGCAGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSAAWLT*YWAALI
Trigger: GATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGC...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTGTGCTGCTGCAGCCTaGTTGACCTGGTATTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSCAAAA*LTWYWA
Trigger: TGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACA...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCTGTGCTGCTGCAGCCTaGTTGACCTGGTATTGGGCA +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLICAAAA*LTWYWA
Trigger: TGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACA...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATAGGCCTCTTTGGCAATaGGGGAAGTACAGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYRPLWQ*GKYSLR
Trigger: CCTCAAGCTGTACTTCCCCCATTGCCAAAGAGGCCT...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAAGAGCAGGCCTCTTTaGCAATGGGGGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYKSRPL*QWGKYS
Trigger: GCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTT...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATAAGAGCAGGCCTCTTTaGCAATGGGGGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYKSRPL*QWGKYS
Trigger: GCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTT...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCGTATCTGGTTGGCTGTaGCTGTTGCAGCGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: AILELLNRAKIAFPSCNIVSGWL*LLQRRE
Trigger: TTCCCTTCGCTGCAACAGCCACAGCCAACCAGATAC...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTTTATGGGTATCTGGTTaGCTGTGGCTGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGLWVSG*LWLLQR
Trigger: TCGCTGCAACAGCCACAGCCAACCAGATACCCATAA...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGGTTCGGCAGATATTATaGGTATCTGGTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWVRQIL*VSGWLW
Trigger: CCACAGCCAACCAGATACCCATAATATCTGCCGAAC...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGGTTCGGCAGATATTATaGGTATCTGGTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ILLSNKNDSACALSALTAVRQIL*VSGWLW
Trigger: CCACAGCCAACCAGATACCCATAATATCTGCCGAAC...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATAAGTGTGGGGGTGGATaGAGATATTTGCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNKCGGG*RYLQFS
Trigger: AGAGAACTGCAAATATCTTCATCCACCCCCACACTT...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTGCCATGTTCTTCTGCTaGATCAAGTTATTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGAMFFC*IKLFRP
Trigger: TGGGCGGAATAACTTGATTCAGCAGAAGAACATGGC...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAGTGCTGTCAGCAGGATaGGCAAACCGACAGTCATTT +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTVLSAG*ANRQSF
Trigger: AAATGACTGTCGGTTTGCTCATCCTGCTGACAGCAC...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTGGTATTGGGCAGCCTTaGTCTTGGCTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTGIGQP*SWLAGV
Trigger: CACACCTGCAAGCCAAGATCAAGGCTGCCCAATACC...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGGGTATTGGGCAGCCTTaGTCTTGGCTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSGIGQP*SWLAGV
Trigger: CACACCTGCAAGCCAAGATCAAGGCTGCCCAATACC...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATCTGCTGCAGCCTGGTTaGCCTGGTATTGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDLLQPG*PGIGQP
Trigger: AGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAG...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTACTGCTGCAGCCTGGTTaGCCTGGTATTGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVLLQPG*PGIGQP
Trigger: AGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAG...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp AGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTGTCGCTTCAGTGATTTaGCAGCCGACTGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: RFPCCRFFWLTCNMWMSCVASVI*QPTESW
Trigger: CCATGACTCAGTCGGCTGTCAAATCACTGAAGCGAC...ACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
CDS-3UTR TCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCGCTTCAGTGATTTaGCAGCCGACTGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTVASVI*QPTESW
Trigger: CCATGACTCAGTCGGCTGTCAAATCACTGAAGCGAC...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACTTGGCTAACTGCATTTaGTGGGCCAGCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHLANCI*WASMAM
Trigger: CATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAA...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCCGTGACCAACATTGGTaGAGTCGGCAAGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLRDQHW*SRQDLC
Trigger: GCAGAGATCTTGCCGACTGCACCAATGTTGGTCACG...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGAC +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWLLCCN*HAGTLD
Trigger: GTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAG...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGAC +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTLLCCN*HAGTLD
Trigger: GTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAG...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGCATTTTCTCCTCTGTTaGAATTGCCACGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWHFLLC*NCHAGT
Trigger: AGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATG...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATCATTTTCTCCTCTGTTaGAATTGCCACGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNHFLLC*NCHAGT
Trigger: AGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATG...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACACTTGGCTTGCAGGTGTaGGGGAGGATGGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTLGLQV*GRMEVF
Trigger: AAATACTTCCATCCTCCCGCACACCTGCAAGCCAAG...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTGCCTTGATCTTGGCTTaGAGGTGTGCGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSALILA*RCAGGW
Trigger: CCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGC...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTTGCAGCCTGTGCTGCTaGAGCCTGGTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTCSLCC*SLVDLV
Trigger: TACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCA...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGGCAGATGTTGTTGCTaGGGACACAGTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTGRCCC*GHSGWR
Trigger: ACGCCAGCCACTGTGTCCGCAGCAACAACATCTGCC...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATTTTGCTGGGCCAGCATaGCCATGTTCTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYFAGPA*PCSSAE
Trigger: TTCAGCAGAAGAACATGGCCATGCTGGCCCAGCAAA...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGCTAACTGCATTTGCTaGGCCAGCATGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTANCIC*ASMAMF
Trigger: GAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGC...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTGCTAACTGCATTTGCTaGGCCAGCATGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSANCIC*ASMAMF
Trigger: GAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGC...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCCGGGCATCATGGCATTaGCTAACTGCATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLRASWH*LTAFAG
Trigger: CCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCG...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCCTGCTGATGCACTGGTaGCTAAGCTTGGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLLLMHW*LSLVQL
Trigger: CAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCAG...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGAGGCTGCTGATGCACTaGTGGCTAAGCTTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWRLLMH*WLSLVQ
Trigger: TTGCACCAAGCTTAGCCACCAGTGCATCAGCAGCCT...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCAGGCTGCTGATGCACTaGTGGCTAAGCTTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: DRNITSAQIPTECTKCVGRLLMH*WLSLVQ
Trigger: TTGCACCAAGCTTAGCCACCAGTGCATCAGCAGCCT...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTTGCTGGAACCAGGCTTaGGGAAACAGGCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTCWNQA*GNRPQV
Trigger: TACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCA...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACCGGCAAGATCTCTGCTaGAACCAGGCTTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDRQDLC*NQAWGN
Trigger: GTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCG...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TCTTTGTATGATTGTTTTGTGACGACAGCTCTACATCTGGGTAACATACTTGTGCGGCAAGATCTCTGCTaGAACCAGGCTTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SLYDCFVTTALHLGNILVRQDLC*NQAWGN
Trigger: GTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCG...CACAAGTATGTTACCCAGATGTAGAGCTGTCGTCACAAAACAATCATACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000192607.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTACGGCAAGATCTCTGCTaGAACCAGGCTTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLRQDLC*NQAWGN
Trigger: GTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCG...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTCCCCGTGACCAACATTaGTGCAGTCGGCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLPRDQH*CSRQDL
Trigger: GAGATCTTGCCGACTGCACCAATGTTGGTCACGGGG...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCTTGCAATTGCCACGCTaGTACTCTCGACACACCTCC +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLILQLPR*YSRHTS
Trigger: GGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAA...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCAGGTGTGCGGGAGGATaGAAGTATTTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFRCAGG*KYLHFS
Trigger: GGAAAAGTGCAAATACTTCCATCCTCCCGCACACCT...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATTGGTTGACCTGGTATTaGGCAGCCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYWLTWY*AALILA
Trigger: AGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCA...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACATGGTTGACCTGGTATTaGGCAGCCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTWLTWY*AALILA
Trigger: AGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCA...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTGCAGCCTGGTTGACCTaGTATTGGGCAGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLAAWLT*YWAALI
Trigger: GATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGC...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTGCAGCCTGGTTGACCTaGTATTGGGCAGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMIAAWLT*YWAALI
Trigger: GATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGC...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACAGGCCTCTTTGGCAATaGGGGAAGTACAGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHRPLWQ*GKYSLR
Trigger: CCTCAAGCTGTACTTCCCCCATTGCCAAAGAGGCCT...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAGGCCTCTTTGGCAATaGGGGAAGTACAGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLIRPLWQ*GKYSLR
Trigger: CCTCAAGCTGTACTTCCCCCATTGCCAAAGAGGCCT...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTAGGCCTCTTTGGCAATaGGGGAAGTACAGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSRPLWQ*GKYSLR
Trigger: CCTCAAGCTGTACTTCCCCCATTGCCAAAGAGGCCT...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACAAGAGCAGGCCTCTTTaGCAATGGGGGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHKSRPL*QWGKYS
Trigger: GCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTT...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACTGTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGAGCCTGTTGGTATTaGAAAATACCAGTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: TVLSADEGGWVAGKCNISRACWY*KIPVLK
Trigger: CTTTAACACTGGTATTTTCCAATACCAACAGGCTCT...ACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTGTATCTGGTTGGCTGTaGCTGTTGCAGCGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSVSGWL*LLQRRE
Trigger: TTCCCTTCGCTGCAACAGCCACAGCCAACCAGATAC...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATTGGGTAACATACTTGTaGCTAGTCAGATGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNWVTYL*LVRCSA
Trigger: TGCCGAACATCTGACTAGCCACAAGTATGTTACCCA...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGCTGTAACTGCATGTTaGCTAGAGCCATGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTAVTAC*LEPWQL
Trigger: CAGCTGCCATGGCTCTAGCCAACATGCAGTTACAGC...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000191747.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCGCTGTAACTGCATGTTaGCTAGAGCCATGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DRNITSAQIPTECTKCVGAVTAC*LEPWQL
Trigger: CAGCTGCCATGGCTCTAGCCAACATGCAGTTACAGC...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000191747.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TCTTTGTATGATTGTTTTGTGACGACAGCTCTACATCTGGGTAACATACTTGTGTTCCGTGTCTGGTCGTaGGCAAGTCCCCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SLYDCFVTTALHLGNILVFRVWS*ASPPLK
Trigger: TTTCAAAGGGGGACTTGCTCACGACCAGACACGGAA...CACAAGTATGTTACCCAGATGTAGAGCTGTCGTCACAAAACAATCATACAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000192607.6
ENSMUST00000194069.6
CDS-3UTR TCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGCAACGACCTTTCAGTaGATCAAAGCAGGCGATTAC +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYATTFQ*IKAGDY
Trigger: GTAATCGCCTGCTTTGATTCACTGAAAGGTCGTTGC...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCACTCCAGGATTCCCCGTaGCCAACATTGGTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPLQDSP*PTLVQS
Trigger: CGACTGCACCAATGTTGGTCACGGGGAATCCTGGAG...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTGTGCTGTCAGCAGGATaGGCAAACCGACAGTCATTT +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSVLSAG*ANRQSF
Trigger: AAATGACTGTCGGTTTGCTCATCCTGCTGACAGCAC...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp AGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTGTGCTGTCAGCAGGATaGGCAAACCGACAGTCATTT +
Preference number: 4 (lower is better)
Translates to: RFPCCRFFWLTCNMWMSCVLSAG*ANRQSF
Trigger: AAATGACTGTCGGTTTGCTCATCCTGCTGACAGCAC...ACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGGAGAGCATCTCCCCTTaGTGTAATCCATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWESISP*CNPCRQ
Trigger: CTGTCTGCATGGATTACATCAAGGGGAGATGCTCTC...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGGGTATTGGGCAGCCTTaGTCTTGGCTTGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKGIGQP*SWLAGV
Trigger: CACACCTGCAAGCCAAGATCAAGGCTGCCCAATACC...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGGATTTGACAGCCGACTaGGTCATGGCAGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSDLTAD*VMAAAV
Trigger: TACTGCAGCTGCCATGACTCAGTCGGCTGTCAAATC...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
CDS-3UTR TCA 90 bp TCTTTGTATGATTGTTTTGTGACGACAGCTCTACATCTGGGTAACATACTTGTGGATTTGACAGCCGACTaGGTCATGGCAGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SLYDCFVTTALHLGNILVDLTAD*VMAAAV
Trigger: TACTGCAGCTGCCATGACTCAGTCGGCTGTCAAATC...CACAAGTATGTTACCCAGATGTAGAGCTGTCGTCACAAAACAATCATACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194069.6
CDS-3UTR TCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGAGGGGTCGCTTCAGTaGTTTGACAGCCGACTGAGT +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTEGSLQ*FDSRLS
Trigger: ACTCAGTCGGCTGTCAAATCACTGAAGCGACCCCTC...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR TCA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTGGGGGAAGTACAGCTTaGGGAATTCCCAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMIGGSTA*GIPRSK
Trigger: CTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCC...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATTGGCTAACTGCATTTaGTGGGCCAGCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTILANCI*WASMAM
Trigger: CATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAA...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCATGGCATTGGCTAACTaGATTTGCTGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLMALAN*ICWASM
Trigger: CATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCAT...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCGTGACCAACATTGGTaGAGTCGGCAAGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTRDQHW*SRQDLC
Trigger: GCAGAGATCTTGCCGACTGCACCAATGTTGGTCACG...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTCGTGACCAACATTGGTaGAGTCGGCAAGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLRDQHW*SRQDLC
Trigger: GCAGAGATCTTGCCGACTGCACCAATGTTGGTCACG...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATACTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGAC +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTILLCCN*HAGTLD
Trigger: GTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAG...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTCTTGGCTTGCAGGTGTaGGGGAGGATGGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSLGLQV*GRMEVF
Trigger: AAATACTTCCATCCTCCCGCACACCTGCAAGCCAAG...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTCTTGGCTTGCAGGTGTaGGGGAGGATGGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTLGLQV*GRMEVF
Trigger: AAATACTTCCATCCTCCCGCACACCTGCAAGCCAAG...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATGCCTTGATCTTGGCTTaGAGGTGTGCGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNALILA*RCAGGW
Trigger: CCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGC...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCAGCCTTGATCTTGGCTTaGAGGTGTGCGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPALILA*RCAGGW
Trigger: CCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGC...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATGCAGCCTGTGCTGCTaGAGCCTGGTTGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPCSLCC*SLVDLV
Trigger: TACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCA...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCAAGTAGCTGCAGCCTGTaGTGCTGCAGCCTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPSSCSL*CCSLVD
Trigger: GTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACT...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: AILELLNRAKIAFPSCNIVCCCN*MLARAC
Trigger: ACAGGCTCTAGCCAACATGCAGTTACAGCAGCATAC...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNRNAVC*CNCMLA
Trigger: AGCCAACATGCAGTTACAGCAGCATACAGCATTTCT...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTGCTGGCGTAGCACCGTaGACCATGGGAACAACACTT +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSAGVAP*TMGTTL
Trigger: AAGTGTTGTTCCCATGGTGCACGGTGCTACGCCAGC...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193518.6
CDS-3UTR GCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTACTGAGTCATGGCAGCTaGAGTAGCTGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVLSHGS*SSCSLC
Trigger: GCACAGGCTGCAGCTACTGCAGCTGCCATGACTCAG...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCATG +
Preference number: 4 (lower is better)
Translates to: AILELLNRAKIAFPSCNIVCCCN*MLARAM
Trigger: CATGGCTCTAGCCAACATGCAGTTACAGCAGCATAC...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191747.6
CDS-3UTR CCA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATCGTCCATTTTCAACTTaGCAGCTTTTCGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNRPFST*QLFEGC
Trigger: ACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACG...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGCGTCCATTTTCAACTTaGCAGCTTTTCGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWRPFST*QLFEGC
Trigger: ACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACG...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGTTTGCTGGGCCAGCATaGCCATGTTCTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWFAGPA*PCSSAE
Trigger: TTCAGCAGAAGAACATGGCCATGCTGGCCCAGCAAA...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATAGCTAACTGCATTTGCTaGGCCAGCATGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIANCIC*ASMAMF
Trigger: GAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGC...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAGCTAACTGCATTTGCTaGGCCAGCATGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLANCIC*ASMAMF
Trigger: GAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGC...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATACGGGCATCATGGCATTaGCTAACTGCATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIRASWH*LTAFAG
Trigger: CCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCG...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTCTGCTGATGCACTGGTaGCTAAGCTTGGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLLLMHW*LSLVQL
Trigger: CAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCAG...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTGCTGATGCACTGGTaGCTAAGCTTGGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTLLMHW*LSLVQL
Trigger: CAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCAG...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATACTGCTGATGCACTGGTaGCTAAGCTTGGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTILLMHW*LSLVQL
Trigger: CAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCAG...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGAGGCTGCTGATGCACTaGTGGCTAAGCTTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSRLLMH*WLSLVQ
Trigger: TTGCACCAAGCTTAGCCACCAGTGCATCAGCAGCCT...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGCCCCGTGACCAACATTaGTGCAGTCGGCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKPRDQH*CSRQDL
Trigger: GAGATCTTGCCGACTGCACCAATGTTGGTCACGGGG...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATAGCTGCGGCAGCTGCTaGCACTGGAACTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNSCGSC*HWNSRI
Trigger: AATCCTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCT...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATAGCTGCGGCAGCTGCTaGCACTGGAACTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDSCGSC*HWNSRI
Trigger: AATCCTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCT...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTGCAGCCTGGTTGACCTaGTATTGGGCAGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSAAWLT*YWAALI
Trigger: GATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGC...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGAGGCCTCTTTGGCAATaGGGGAAGTACAGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSRPLWQ*GKYSLR
Trigger: CCTCAAGCTGTACTTCCCCCATTGCCAAAGAGGCCT...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTAAGAGCAGGCCTCTTTaGCAATGGGGGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLKSRPL*QWGKYS
Trigger: GCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTT...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAAAGAGCAGGCCTCTTTaGCAATGGGGGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLKSRPL*QWGKYS
Trigger: GCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTT...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTAAGAGCAGGCCTCTTTaGCAATGGGGGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTKSRPL*QWGKYS
Trigger: GCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTT...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTATCTGGTTGGCTGTaGCTGTTGCAGCGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDVSGWL*LLQRRE
Trigger: TTCCCTTCGCTGCAACAGCCACAGCCAACCAGATAC...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCTTATGGGTATCTGGTTaGCTGTGGCTGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLILWVSG*LWLLQR
Trigger: TCGCTGCAACAGCCACAGCCAACCAGATACCCATAA...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTTTATGGGTATCTGGTTaGCTGTGGCTGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: RFPCCRFFWLTCNMWMSCLWVSG*LWLLQR
Trigger: TCGCTGCAACAGCCACAGCCAACCAGATACCCATAA...ACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTTCGGCAGATATTATaGGTATCTGGTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYVRQIL*VSGWLW
Trigger: CCACAGCCAACCAGATACCCATAATATCTGCCGAAC...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCTGGGTAACATACTTGTaGCTAGTCAGATGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFWVTYL*LVRCSA
Trigger: TGCCGAACATCTGACTAGCCACAAGTATGTTACCCA...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTCACCATGGGAACTGGTaGGAGAAATGCTGTATGCTG +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSHHGNW*EKCCML
Trigger: CAGCATACAGCATTTCTCCCACCAGTTCCCATGGTG...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194201.6
3UTR CAA 72 bp GCCATGGTGTGCTTTAAAATATACACAGTTGTGGTTTaGCTTGGCACATTCATCTGTCAGTTCCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: AMVCFKIYTVVV*LGTFICQFPPS
Trigger: TGAGGGAGGGAACTGACAGATGAATGTGCCAAGCAAAACCACAACTGTGTATATTTTAAAGCACACCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGGCAACGACCTTTCAGTaGATCAAAGCAGGCGATTAC +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWATTFQ*IKAGDY
Trigger: GTAATCGCCTGCTTTGATTCACTGAAAGGTCGTTGC...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGCAACGACCTTTCAGTaGATCAAAGCAGGCGATTAC +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTATTFQ*IKAGDY
Trigger: GTAATCGCCTGCTTTGATTCACTGAAAGGTCGTTGC...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAAGTGTGGGGGTGGATaGAGATATTTGCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTKCGGG*RYLQFS
Trigger: AGAGAACTGCAAATATCTTCATCCACCCCCACACTT...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTGCTGTCAGCAGGATaGGCAAACCGACAGTCATTT +
Preference number: 4 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDVLSAG*ANRQSF
Trigger: AAATGACTGTCGGTTTGCTCATCCTGCTGACAGCAC...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTGTGCTGTCAGCAGGATaGGCAAACCGACAGTCATTT +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLVLSAG*ANRQSF
Trigger: AAATGACTGTCGGTTTGCTCATCCTGCTGACAGCAC...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATAGAGAGCATCTCCCCTTaGTGTAATCCATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIESISP*CNPCRQ
Trigger: CTGTCTGCATGGATTACATCAAGGGGAGATGCTCTC...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAGAGAGCATCTCCCCTTaGTGTAATCCATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLESISP*CNPCRQ
Trigger: CTGTCTGCATGGATTACATCAAGGGGAGATGCTCTC...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCGAGAGCATCTCCCCTTaGTGTAATCCATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLESISP*CNPCRQ
Trigger: CTGTCTGCATGGATTACATCAAGGGGAGATGCTCTC...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTGAGAGCATCTCCCCTTaGTGTAATCCATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLESISP*CNPCRQ
Trigger: CTGTCTGCATGGATTACATCAAGGGGAGATGCTCTC...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTGAGAGCATCTCCCCTTaGTGTAATCCATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTESISP*CNPCRQ
Trigger: CTGTCTGCATGGATTACATCAAGGGGAGATGCTCTC...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTGTCATGCACAATATTaGGCCTGGTGGGAGAAATGC +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSCHAQY*AWWEKC
Trigger: GCATTTCTCCCACCAGGCTCAATATTGTGCATGACA...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGATTTGACAGCCGACTaGGTCATGGCAGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTDLTAD*VMAAAV
Trigger: TACTGCAGCTGCCATGACTCAGTCGGCTGTCAAATC...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR TCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATGAGGGGTCGCTTCAGTaGTTTGACAGCCGACTGAGT +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNEGSLQ*FDSRLS
Trigger: ACTCAGTCGGCTGTCAAATCACTGAAGCGACCCCTC...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGGCTTTTCGAAGGATGTaGAAATTTACATTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWAFRRM*KFTFRV
Trigger: GACACGGAATGTAAATTTGCACATCCTTCGAAAAGC...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATAATGGCATTGGCTAACTaGATTTGCTGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIMALAN*ICWASM
Trigger: CATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCAT...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATAGTCGGCAAGATCTCTaGTGGAACCAGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDSRQDL*WNQAWG
Trigger: TCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACT...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATCATTTTCTCCTCTGTTaGAATTGCCACGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYHFLLC*NCHAGT
Trigger: AGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATG...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAGAGGATGGAAGTATTTaGACTTTTCCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: NKNDSACALSALTAILNTEDGSI*TFPESI
Trigger: GATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTC...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTCTTGGCTTGCAGGTGTaGGGGAGGATGGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLLGLQV*GRMEVF
Trigger: AAATACTTCCATCCTCCCGCACACCTGCAAGCCAAG...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTACCAGTGTTAAAGACTaGGGTGGCACCGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSTSVKD*GGTVGF
Trigger: AAAACCAACGGTGCCACCGCAGTCTTTAACACTGGT...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCACCAGTGTTAAAGACTaGGGTGGCACCGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLTSVKD*GGTVGF
Trigger: AAAACCAACGGTGCCACCGCAGTCTTTAACACTGGT...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCACCAGTGTTAAAGACTaGGGTGGCACCGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLITSVKD*GGTVGF
Trigger: AAAACCAACGGTGCCACCGCAGTCTTTAACACTGGT...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHVCCCN*MLARAC
Trigger: ACAGGCTCTAGCCAACATGCAGTTACAGCAGCATAC...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFRNAVC*CNCMLA
Trigger: AGCCAACATGCAGTTACAGCAGCATACAGCATTTCT...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTGRNAV*CCNCML
Trigger: CAACATGCAGTTACAGCAGCATACAGCATTTCTCCC...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGCTGGCGTAGCACCGTaGACCATGGGAACAACACTT +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVAGVAP*TMGTTL
Trigger: AAGTGTTGTTCCCATGGTGCACGGTGCTACGCCAGC...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193518.6
CDS-3UTR GCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTGTGGCAGATGTTGTTaGTGCGGACACAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTCGRCC*CGHSGW
Trigger: CCAGCCACTGTGTCCGCAGCAACAACATCTGCCACA...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGCGGGCATCATGGCATTaGCTAACTGCATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKRASWH*LTAFAG
Trigger: CCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCG...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGCTGCTGATGCACTGGTaGCTAAGCTTGGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKLLMHW*LSLVQL
Trigger: CAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCAG...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGAGGCTGCTGATGCACTaGTGGCTAAGCTTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKRLLMH*WLSLVQ
Trigger: TTGCACCAAGCTTAGCCACCAGTGCATCAGCAGCCT...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATCCCCGTGACCAACATTaGTGCAGTCGGCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNPRDQH*CSRQDL
Trigger: GAGATCTTGCCGACTGCACCAATGTTGGTCACGGGG...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGTTGCAATTGCCACGCTaGTACTCTCGACACACCTCC +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKLQLPR*YSRHTS
Trigger: GGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAA...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTAGGTGTGCGGGAGGATaGAAGTATTTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTRCAGG*KYLHFS
Trigger: GGAAAAGTGCAAATACTTCCATCCTCCCGCACACCT...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTTGGTTGACCTGGTATTaGGCAGCCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMIWLTWY*AALILA
Trigger: AGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCA...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCTGGTTGACCTGGTATTaGGCAGCCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLWLTWY*AALILA
Trigger: AGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCA...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGTTGACCTGGTATTaGGCAGCCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIWLTWY*AALILA
Trigger: AGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCA...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTGCAGCCTGGTTGACCTaGTATTGGGCAGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTAAWLT*YWAALI
Trigger: GATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGC...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGCAGCCTGGTTGACCTaGTATTGGGCAGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDAAWLT*YWAALI
Trigger: GATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGC...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTATGTGCTGCTGCAGCCTaGTTGACCTGGTATTGGGCA +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVCAAAA*LTWYWA
Trigger: TGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACA...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCAGAGCCTGTTGGTATTaGAAAATACCAGTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: NDSACALSALTAILNTRCRACWY*KIPVLK
Trigger: CTTTAACACTGGTATTTTCCAATACCAACAGGCTCT...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGAGAGCCTGTTGGTATTaGAAAATACCAGTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLRACWY*KIPVLK
Trigger: CTTTAACACTGGTATTTTCCAATACCAACAGGCTCT...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGCTGTAACTGCATGTTaGCTAGAGCCTGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYAVTAC*LEPVGI
Trigger: AATACCAACAGGCTCTAGCCAACATGCAGTTACAGC...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACGCTGTAACTGCATGTTaGCTAGAGCCTGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYAVTAC*LEPVGI
Trigger: AATACCAACAGGCTCTAGCCAACATGCAGTTACAGC...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTTTATGGGTATCTGGTTaGCTGTGGCTGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLLWVSG*LWLLQR
Trigger: TCGCTGCAACAGCCACAGCCAACCAGATACCCATAA...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCGTTCGGCAGATATTATaGGTATCTGGTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DRNITSAQIPTECTKCVGVRQIL*VSGWLW
Trigger: CCACAGCCAACCAGATACCCATAATATCTGCCGAAC...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTGCACCATGGGAACTaGTGGGAGAAATGCTGTATG +
Preference number: 4 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDVHHGN*WEKCCM
Trigger: CATACAGCATTTCTCCCACCAGTTCCCATGGTGCAC...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATTATGGGTATCTGGTaGGAGAAATGCTGTATGCTG +
Preference number: 4 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGIMGIW*EKCCML
Trigger: CAGCATACAGCATTTCTCCCACCAGATACCCATAAT...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194069.6
3UTR CAA 72 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTaGACGGTATATACAATATGGCTAATGACGTCGTCC +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCC*TVYTIWLMTSS
Trigger: GGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
3UTR CAA 72 bp GATTTGGCCCAATGGAGTTTTGTCAGTCATGAGATCTaGGAAGGATGGCAAATCTTTCCAGCTGAAAAATCC +
Preference number: 4 (lower is better)
Translates to: DLAQWSFVSHEI*EGWQIFPAEKS
Trigger: GGATTTTTCAGCTGGAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATTTCCGTGTCTGGTCGTaGGCAAGTCCCCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNFRVWS*ASPPLK
Trigger: TTTCAAAGGGGGACTTGCTCACGACCAGACACGGAA...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTGCAACGACCTTTCAGTaGATCAAAGCAGGCGATTAC +
Preference number: 4 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMIATTFQ*IKAGDY
Trigger: GTAATCGCCTGCTTTGATTCACTGAAAGGTCGTTGC...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATAGCCATGTTCTTCTGCTaGATCAAGTTATTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIAMFFC*IKLFRP
Trigger: TGGGCGGAATAACTTGATTCAGCAGAAGAACATGGC...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTGTGCTGTCAGCAGGATaGGCAAACCGACAGTCATTT +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSVLSAG*ANRQSF
Trigger: AAATGACTGTCGGTTTGCTCATCCTGCTGACAGCAC...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATCCATGCAGACAGTaGCTGTGTTGTCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYNPCRQ*LCCHWY
Trigger: ATACCAATGACAACACAGTCACTGTCTGCATGGATT...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAAATCCATGCAGACAGTaGCTGTGTTGTCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTNPCRQ*LCCHWY
Trigger: ATACCAATGACAACACAGTCACTGTCTGCATGGATT...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGGAGAGCATCTCCCCTTaGTGTAATCCATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKESISP*CNPCRQ
Trigger: CTGTCTGCATGGATTACATCAAGGGGAGATGCTCTC...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACTGTCATGCACAATATTaGGCCTGGTGGGAGAAATGC +
Preference number: 4 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDCHAQY*AWWEKC
Trigger: GCATTTCTCCCACCAGGCTCAATATTGTGCATGACA...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGTCGCTTCAGTGATTTaGCAGCCGACTGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDVASVI*QPTESW
Trigger: CCATGACTCAGTCGGCTGTCAAATCACTGAAGCGAC...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
CDS-3UTR GCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATTTGGCTAACTGCATTTaGTGGGCCAGCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDLANCI*WASMAM
Trigger: CATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAA...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATCGTGACCAACATTGGTaGAGTCGGCAAGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNRDQHW*SRQDLC
Trigger: GCAGAGATCTTGCCGACTGCACCAATGTTGGTCACG...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATCGTGACCAACATTGGTaGAGTCGGCAAGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDRDQHW*SRQDLC
Trigger: GCAGAGATCTTGCCGACTGCACCAATGTTGGTCACG...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGAC +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNLLCCN*HAGTLD
Trigger: GTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAG...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGAC +
Preference number: 4 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTLLCCN*HAGTLD
Trigger: GTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAG...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCCATTTTCTCCTCTGTTaGAATTGCCACGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: DRNITSAQIPTECTKCVGHFLLC*NCHAGT
Trigger: AGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATG...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACCATTTTCTCCTCTGTTaGAATTGCCACGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHHFLLC*NCHAGT
Trigger: AGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATG...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACGAGGATGGAAGTATTTaGACTTTTCCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHEDGSI*TFPESI
Trigger: GATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTC...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTGAGGATGGAAGTATTTaGACTTTTCCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSEDGSI*TFPESI
Trigger: GATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTC...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGGAGGATGGAAGTATTTaGACTTTTCCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWEDGSI*TFPESI
Trigger: GATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTC...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCGAGGATGGAAGTATTTaGACTTTTCCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLEDGSI*TFPESI
Trigger: GATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTC...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGCTTGGCTTGCAGGTGTaGGGGAGGATGGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKLGLQV*GRMEVF
Trigger: AAATACTTCCATCCTCCCGCACACCTGCAAGCCAAG...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTTGGCTTGCAGGTGTaGGGGAGGATGGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSLGLQV*GRMEVF
Trigger: AAATACTTCCATCCTCCCGCACACCTGCAAGCCAAG...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTACCAGTGTTAAAGACTaGGGTGGCACCGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMITSVKD*GGTVGF
Trigger: AAAACCAACGGTGCCACCGCAGTCTTTAACACTGGT...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATAACCAGTGTTAAAGACTaGGGTGGCACCGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTITSVKD*GGTVGF
Trigger: AAAACCAACGGTGCCACCGCAGTCTTTAACACTGGT...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTVCCCN*MLARAC
Trigger: ACAGGCTCTAGCCAACATGCAGTTACAGCAGCATAC...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLVCCCN*MLARAC
Trigger: ACAGGCTCTAGCCAACATGCAGTTACAGCAGCATAC...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYRNAVC*CNCMLA
Trigger: AGCCAACATGCAGTTACAGCAGCATACAGCATTTCT...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHGRNAV*CCNCML
Trigger: CAACATGCAGTTACAGCAGCATACAGCATTTCTCCC...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLGRNAV*CCNCML
Trigger: CAACATGCAGTTACAGCAGCATACAGCATTTCTCCC...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTATTTGCAGTTCTCTCTaGAGCAACGACCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSICSSL*SNDLSV
Trigger: CACTGAAAGGTCGTTGCTCCAGAGAGAACTGCAAAT...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCATTTGCAGTTCTCTCTaGAGCAACGACCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLICSSL*SNDLSV
Trigger: CACTGAAAGGTCGTTGCTCCAGAGAGAACTGCAAAT...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATCGGGCATCATGGCATTaGCTAACTGCATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNRASWH*LTAFAG
Trigger: CCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCG...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCACGGGCATCATGGCATTaGCTAACTGCATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPRASWH*LTAFAG
Trigger: CCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCG...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATCTGCTGATGCACTGGTaGCTAAGCTTGGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDLLMHW*LSLVQL
Trigger: CAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCAG...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATAGGCTGCTGATGCACTaGTGGCTAAGCTTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNRLLMH*WLSLVQ
Trigger: TTGCACCAAGCTTAGCCACCAGTGCATCAGCAGCCT...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAAGGCTGCTGATGCACTaGTGGCTAAGCTTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVRLLMH*WLSLVQ
Trigger: TTGCACCAAGCTTAGCCACCAGTGCATCAGCAGCCT...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTATTGCAATTGCCACGCTaGTACTCTCGACACACCTCC +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVLQLPR*YSRHTS
Trigger: GGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAA...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTAGGTGTGCGGGAGGATaGAAGTATTTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLRCAGG*KYLHFS
Trigger: GGAAAAGTGCAAATACTTCCATCCTCCCGCACACCT...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTTGGTTGACCTGGTATTaGGCAGCCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTWLTWY*AALILA
Trigger: AGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCA...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATAGGCCTCTTTGGCAATaGGGGAAGTACAGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNRPLWQ*GKYSLR
Trigger: CCTCAAGCTGTACTTCCCCCATTGCCAAAGAGGCCT...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTAGAGCCTGTTGGTATTaGAAAATACCAGTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRRACWY*KIPVLK
Trigger: CTTTAACACTGGTATTTTCCAATACCAACAGGCTCT...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGTATCTGGTTGGCTGTaGCTGTTGCAGCGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDVSGWL*LLQRRE
Trigger: TTCCCTTCGCTGCAACAGCCACAGCCAACCAGATAC...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGTATCTGGTTGGCTGTaGCTGTTGCAGCGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVVSGWL*LLQRRE
Trigger: TTCCCTTCGCTGCAACAGCCACAGCCAACCAGATAC...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCGATATTATGGGTATCTaGTTGGCTGTGGCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: DRNITSAQIPTECTKCVGDIMGI*LAVAVA
Trigger: TGCAACAGCCACAGCCAACCAGATACCCATAATATC...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATAGTTCGGCAGATATTATaGGTATCTGGTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIVRQIL*VSGWLW
Trigger: CCACAGCCAACCAGATACCCATAATATCTGCCGAAC...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAGTTCGGCAGATATTATaGGTATCAACACTTGTAGCG +
Preference number: 4 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTVRQIL*VSTLVA
Trigger: CGCTACAAGTGTTGATACCCATAATATCTGCCGAAC...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192607.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTTGCAATTGCCACGCTaGTACTCTCGACACACCACG +
Preference number: 4 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTLQLPR*YSRHTT
Trigger: CGTGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAA...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194201.6
3UTR CAA 72 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTaGCTTGACGGTATATACAATATGGCTAATGACGTC +
Preference number: 4 (lower is better)
Translates to: CGCLVAEGFLYV*LDGIYNMANDV
Trigger: GACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTAAGTGTGGGGGTGGATaGAGATATTTGCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLKCGGG*RYLQFS
Trigger: AGAGAACTGCAAATATCTTCATCCACCCCCACACTT...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACAATCCATGCAGACAGTaGCTGTGTTGTCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHNPCRQ*LCCHWY
Trigger: ATACCAATGACAACACAGTCACTGTCTGCATGGATT...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATGAGAGCATCTCCCCTTaGTGTAATCCATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNESISP*CNPCRQ
Trigger: CTGTCTGCATGGATTACATCAAGGGGAGATGCTCTC...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTTGTCATGCACAATATTaGGCCTGGTGGGAGAAATGC +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTCHAQY*AWWEKC
Trigger: GCATTTCTCCCACCAGGCTCAATATTGTGCATGACA...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
CDS-3UTR GCA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACGCTTTTCGAAGGATGTaGAAATTTACATTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYAFRRM*KFTFRV
Trigger: GACACGGAATGTAAATTTGCACATCCTTCGAAAAGC...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTATGGCATTGGCTAACTaGATTTGCTGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTMALAN*ICWASM
Trigger: CATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCAT...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCGAGGATGGAAGTATTTaGACTTTTCCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLEDGSI*TFPESI
Trigger: GATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTC...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTGAGGATGGAAGTATTTaGACTTTTCCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLEDGSI*TFPESI
Trigger: GATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTC...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGGAGGATGGAAGTATTTaGACTTTTCCCGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSEDGSI*TFPESI
Trigger: GATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTC...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RFPCCRFFWLTCNMWMSCRNAVC*CNCMLA
Trigger: AGCCAACATGCAGTTACAGCAGCATACAGCATTTCT...ACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSRNAVC*CNCMLA
Trigger: AGCCAACATGCAGTTACAGCAGCATACAGCATTTCT...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWRNAVC*CNCMLA
Trigger: AGCCAACATGCAGTTACAGCAGCATACAGCATTTCT...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLGRNAV*CCNCML
Trigger: CAACATGCAGTTACAGCAGCATACAGCATTTCTCCC...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSGRNAV*CCNCML
Trigger: CAACATGCAGTTACAGCAGCATACAGCATTTCTCCC...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTATTTGCAGTTCTCTCTaGAGCAACGACCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMIICSSL*SNDLSV
Trigger: CACTGAAAGGTCGTTGCTCCAGAGAGAACTGCAAAT...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTATTTGCTGGGCCAGCATaGCCATGTTCTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVFAGPA*PCSSAE
Trigger: TTCAGCAGAAGAACATGGCCATGCTGGCCCAGCAAA...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATTTTGCTGGGCCAGCATaGCCATGTTCTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNFAGPA*PCSSAE
Trigger: TTCAGCAGAAGAACATGGCCATGCTGGCCCAGCAAA...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTAGGTGTGCGGGAGGATaGAAGTATTTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSRCAGG*KYLHFS
Trigger: GGAAAAGTGCAAATACTTCCATCCTCCCGCACACCT...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCAGAGCCTGTTGGTATTaGAAAATACCAGTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFRACWY*KIPVLK
Trigger: CTTTAACACTGGTATTTTCCAATACCAACAGGCTCT...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGGCTGTAACTGCATGTTaGCTAGAGCCTGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSAVTAC*LEPVGI
Trigger: AATACCAACAGGCTCTAGCCAACATGCAGTTACAGC...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TCTTTGTATGATTGTTTTGTGACGACAGCTCTACATCTGGGTAACATACTTGTGGCTGTAACTGCATGTTaGCTAGAGCCTGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: SLYDCFVTTALHLGNILVAVTAC*LEPVGI
Trigger: AATACCAACAGGCTCTAGCCAACATGCAGTTACAGC...CACAAGTATGTTACCCAGATGTAGAGCTGTCGTCACAAAACAATCATACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192607.6
ENSMUST00000194069.6
CDS-3UTR CCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATAGATATTATGGGTATCTaGTTGGCTGTGGCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIDIMGI*LAVAVA
Trigger: TGCAACAGCCACAGCCAACCAGATACCCATAATATC...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAGATATTATGGGTATCTaGTTGGCTGTGGCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLDIMGI*LAVAVA
Trigger: TGCAACAGCCACAGCCAACCAGATACCCATAATATC...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTGATATTATGGGTATCTaGTTGGCTGTGGCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLDIMGI*LAVAVA
Trigger: TGCAACAGCCACAGCCAACCAGATACCCATAATATC...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGGTTCGGCAGATATTATaGGTATCTGGTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKVRQIL*VSGWLW
Trigger: CCACAGCCAACCAGATACCCATAATATCTGCCGAAC...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTACACCATGGGAACTGGTaGGAGAAATGCTGTATGCTG +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVHHGNW*EKCCML
Trigger: CAGCATACAGCATTTCTCCCACCAGTTCCCATGGTG...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTGTGCACCATGGGAACTaGTGGGAGAAATGCTGTATG +
Preference number: 4 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTVHHGN*WEKCCM
Trigger: CATACAGCATTTCTCCCACCAGTTCCCATGGTGCAC...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTGTTCGGCAGATATTATaGGTATCAACACTTGTAGCG +
Preference number: 4 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSVRQIL*VSTLVA
Trigger: CGCTACAAGTGTTGATACCCATAATATCTGCCGAAC...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192607.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTAAGTGTGGGGGTGGATaGAGATATTTGCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSKCGGG*RYLQFS
Trigger: AGAGAACTGCAAATATCTTCATCCACCCCCACACTT...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATGCCATGTTCTTCTGCTaGATCAAGTTATTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNAMFFC*IKLFRP
Trigger: TGGGCGGAATAACTTGATTCAGCAGAAGAACATGGC...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGAATCCATGCAGACAGTaGCTGTGTTGTCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSNPCRQ*LCCHWY
Trigger: ATACCAATGACAACACAGTCACTGTCTGCATGGATT...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATAAATCCATGCAGACAGTaGCTGTGTTGTCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTINPCRQ*LCCHWY
Trigger: ATACCAATGACAACACAGTCACTGTCTGCATGGATT...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTATGTCATGCACAATATTaGGCCTGGTGGGAGAAATGC +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVCHAQY*AWWEKC
Trigger: GCATTTCTCCCACCAGGCTCAATATTGTGCATGACA...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATTGTCATGCACAATATTaGGCCTGGTGGGAGAAATGC +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNCHAQY*AWWEKC
Trigger: GCATTTCTCCCACCAGGCTCAATATTGTGCATGACA...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCGCTTTTCGAAGGATGTaGAAATTTACATTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: VLLDGIYNMANDVVLTLIAFRRM*KFTFRV
Trigger: GACACGGAATGTAAATTTGCACATCCTTCGAAAAGC...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGCATTTTCTCCTCTGTTaGAATTGCCACGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKHFLLC*NCHAGT
Trigger: AGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATG...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCATTTTCTCCTCTGTTaGAATTGCCACGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSHFLLC*NCHAGT
Trigger: AGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATG...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDVCCCN*MLARAC
Trigger: ACAGGCTCTAGCCAACATGCAGTTACAGCAGCATAC...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTATTTTGTGTCCCGAATTaGTGTGACACTAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLFCVPN*CDTNSH
Trigger: ATGGCTGTTAGTGTCACACCAATTCGGGACACAAAA...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTTTTTGTGTCCCGAATTaGTGTGACACTAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMIFCVPN*CDTNSH
Trigger: ATGGCTGTTAGTGTCACACCAATTCGGGACACAAAA...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTTTTGTGTCCCGAATTaGTGTGACACTAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSFCVPN*CDTNSH
Trigger: ATGGCTGTTAGTGTCACACCAATTCGGGACACAAAA...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTCGTCCATTTTCAACTTaGCAGCTTTTCGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLRPFST*QLFEGC
Trigger: ACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACG...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCGTCCATTTTCAACTTaGCAGCTTTTCGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTRPFST*QLFEGC
Trigger: ACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACG...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGGCTGTAACTGCATGTTaGCTAGAGCCTGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKAVTAC*LEPVGI
Trigger: AATACCAACAGGCTCTAGCCAACATGCAGTTACAGC...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTGCTGTAACTGCATGTTaGCTAGAGCCTGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSAVTAC*LEPVGI
Trigger: AATACCAACAGGCTCTAGCCAACATGCAGTTACAGC...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGTGGGTAACATACTTGTaGCTAGTCAGATGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKWVTYL*LVRCSA
Trigger: TGCCGAACATCTGACTAGCCACAAGTATGTTACCCA...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTTGGGTAACATACTTGTaGCTAGTCAGATGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTWVTYL*LVRCSA
Trigger: TGCCGAACATCTGACTAGCCACAAGTATGTTACCCA...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTTCGGCAGATATTATaGGTATCTGGTGGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDVRQIL*VSGGRN
Trigger: ATTTCTCCCACCAGATACCCATAATATCTGCCGAAC...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194069.6
3UTR CAA 72 bp CATGCAATATGTGGATGTCTTGTGGCTGAGGGATTTTaGTATGTGTTGCTTGACGGTATATACAATATGGCT +
Preference number: 4 (lower is better)
Translates to: HAICGCLVAEGF*YVLLDGIYNMA
Trigger: AGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAAAGTGTGGGGGTGGATaGAGATATTTGCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVKCGGG*RYLQFS
Trigger: AGAGAACTGCAAATATCTTCATCCACCCCCACACTT...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR TCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTAATCCATGCAGACAGTaGCTGTGTTGTCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSNPCRQ*LCCHWY
Trigger: ATACCAATGACAACACAGTCACTGTCTGCATGGATT...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTAATCCATGCAGACAGTaGCTGTGTTGTCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTNPCRQ*LCCHWY
Trigger: ATACCAATGACAACACAGTCACTGTCTGCATGGATT...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTGCTTTTCGAAGGATGTaGAAATTTACATTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTAFRRM*KFTFRV
Trigger: GACACGGAATGTAAATTTGCACATCCTTCGAAAAGC...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATCATTTTCTCCTCTGTTaGAATTGCCACGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDHFLLC*NCHAGT
Trigger: AGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATG...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSRNAVC*CNCMLA
Trigger: AGCCAACATGCAGTTACAGCAGCATACAGCATTTCT...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTRNAVC*CNCMLA
Trigger: AGCCAACATGCAGTTACAGCAGCATACAGCATTTCT...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVGRNAV*CCNCML
Trigger: CAACATGCAGTTACAGCAGCATACAGCATTTCTCCC...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNGRNAV*CCNCML
Trigger: CAACATGCAGTTACAGCAGCATACAGCATTTCTCCC...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTTTTTGTGTCCCGAATTaGTGTGACACTAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTFCVPN*CDTNSH
Trigger: ATGGCTGTTAGTGTCACACCAATTCGGGACACAAAA...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTTTTTGTGTCCCGAATTaGTGTGACACTAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSFCVPN*CDTNSH
Trigger: ATGGCTGTTAGTGTCACACCAATTCGGGACACAAAA...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTCGTCCATTTTCAACTTaGCAGCTTTTCGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTRPFST*QLFEGC
Trigger: ACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACG...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATATTTGCAGTTCTCTCTaGAGCAACGACCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDICSSL*SNDLSV
Trigger: CACTGAAAGGTCGTTGCTCCAGAGAGAACTGCAAAT...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGAGAGCCTGTTGGTATTaGAAAATACCAGTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWRACWY*KIPVLK
Trigger: CTTTAACACTGGTATTTTCCAATACCAACAGGCTCT...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCAGCTGTAACTGCATGTTaGCTAGAGCCTGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPAVTAC*LEPVGI
Trigger: AATACCAACAGGCTCTAGCCAACATGCAGTTACAGC...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGATATTATGGGTATCTaGTTGGCTGTGGCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVDIMGI*LAVAVA
Trigger: TGCAACAGCCACAGCCAACCAGATACCCATAATATC...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATGATATTATGGGTATCTaGTTGGCTGTGGCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNDIMGI*LAVAVA
Trigger: TGCAACAGCCACAGCCAACCAGATACCCATAATATC...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTATGGGTAACATACTTGTaGCTAGTCAGATGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: LDRNITSAQIPTECTKCVWVTYL*LVRCSA
Trigger: TGCCGAACATCTGACTAGCCACAAGTATGTTACCCA...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CCA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCGATATTATGGGTATCTaGTGGGAGAAATGCTGTATG +
Preference number: 4 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLDIMGI*WEKCCM
Trigger: CATACAGCATTTCTCCCACCAGATACCCATAATATC...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194069.6
3UTR CAA 72 bp TACTTAAAGCCATGGTGTGCTTTAAAATATACACAGTaGTGGTTTTGCTTGGCACATTCATCTGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: YLKPWCALKYTQ*WFCLAHSSVSS
Trigger: GGAACTGACAGATGAATGTGCCAAGCAAAACCACAACTGTGTATATTTTAAAGCACACCATGGCTTTAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR TCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATAATCCATGCAGACAGTaGCTGTGTTGTCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNNPCRQ*LCCHWY
Trigger: ATACCAATGACAACACAGTCACTGTCTGCATGGATT...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR GCA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNRNAVC*CNCMLA
Trigger: AGCCAACATGCAGTTACAGCAGCATACAGCATTTCT...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CCA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTAGAGCCTGTTGGTATTaGAAAATACCAGTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTRACWY*KIPVLK
Trigger: CTTTAACACTGGTATTTTCCAATACCAACAGGCTCT...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
3UTR CAA 72 bp ATAACATGTGAAGTCACCATTACTCTCTTAACACGATaGAAATTACATTGGTATGGGTTCCAACCCGTAATG +
Preference number: 4 (lower is better)
Translates to: ITCEVTITLLTR*KLHWYGFQPVM
Trigger: CATTACGGGTTGGAACCCATACCAATGTAATTTCAATCGTGTTAAGAGAGTAATGGTGACTTCACATGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR GCA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTGCTTTTCGAAGGATGTaGAAATTTACATTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTAFRRM*KFTFRV
Trigger: GACACGGAATGTAAATTTGCACATCCTTCGAAAAGC...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS TCA 90 bp CAGCAGCTGCGGCAGCTGCTGGCACTGGAACTCCAGGATTCCCCGTaGCCAACATTGGTGCAGTCGGCAAGATCTCTGCTGGAACCAGGC +
Preference number: 5 (lower is better)
Translates to: QQLRQLLALELQDSP*PTLVQSARSLLEPG
Trigger: GCCTGGTTCCAGCAGAGATCTTGCCGACTGCACCAATGTTGGTCACGGGGAATCCTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000195077.6
ENSMUST00000195817.3
CDS CCA 90 bp GCAGCTGCAGTAGCTGCAGCCTGTGCTGCTGCAGCCTGGTTGACCTaGTATTGGGCAGCCTTGATCTTGGCTTGCAGGTGTGCGGGAGGA +
Preference number: 5 (lower is better)
Translates to: AAAVAAACAAAAWLT*YWAALILACRCAGG
Trigger: TCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS CCA 90 bp GCAGTAGCTGCAGCCTGTGCTGCTGCAGCCTGGTTGACCTGGTATTaGGCAGCCTTGATCTTGGCTTGCAGGTGTGCGGGAGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: AVAAACAAAAWLTWY*AALILACRCAGGWK
Trigger: CTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS CCA 90 bp CTCGACACACCACGGGCTGCAACGGGGCACCGGGCATCATGGCATTaGCTAACTGCATTTGCTGGGCCAGCATGGCCATGTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LDTPRAATGHRASWH*LTAFAGPAWPCSSA
Trigger: AGCAGAAGAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGGTGTGTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194201.6
CDS CCA 90 bp GGTACTCTCGACACACCACGGGCTGCAACGGGGCACCGGGCATCATaGCATTGGCTAACTGCATTTGCTGGGCCAGCATGGCCATGTTCT +
Preference number: 5 (lower is better)
Translates to: GTLDTPRAATGHRAS*HWLTAFAGPAWPCS
Trigger: AGAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGGTGTGTCGAGAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194201.6
CDS CCA 90 bp GGCAGCTGCTGGCACTGGAACTCCAGGATTCCCCGTGACCAACATTaGTGCAGTCGGCAAGATCTCTGCTGGAACCAGGCTTGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: GSCWHWNSRIPRDQH*CSRQDLCWNQAWGN
Trigger: GTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACTGCACCAATGTTGGTCACGGGGAATCCTGGAGTTCCAGTGCCAGCAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000195077.6
ENSMUST00000195817.3
CDS GCA 90 bp CAGCAGGATGAGCAAACCGACAGTCATTTTCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGACACACCACGGGCTGCAACGGGGCAC +
Preference number: 5 (lower is better)
Translates to: QQDEQTDSHFLLCCN*HAGTLDTPRAATGH
Trigger: GTGCCCCGTTGCAGCCCGTGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTCATCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194201.6
CDS CCA 90 bp AAAACATTGGCACGGGCTGCAACGGGGCACCGGGCATCATGGCATTaGCTAACTGCATTTGCTGGGCCAGCATGGCCATGTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: KTLARAATGHRASWH*LTAFAGPAWPCSSA
Trigger: AGCAGAAGAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGCCAATGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195077.6
CDS CCA 90 bp CAACTGAAAACATTGGCACGGGCTGCAACGGGGCACCGGGCATCATaGCATTGGCTAACTGCATTTGCTGGGCCAGCATGGCCATGTTCT +
Preference number: 5 (lower is better)
Translates to: QLKTLARAATGHRAS*HWLTAFAGPAWPCS
Trigger: AGAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGCCAATGTTTTCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195077.6
CDS CCA 90 bp GCATTATGTTCACGGGCTGCAACGGGGCACCGGGCATCATGGCATTaGCTAACTGCATTTGCTGGGCCAGCATGGCCATGTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ALCSRAATGHRASWH*LTAFAGPAWPCSSA
Trigger: AGCAGAAGAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGAACATAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192757.6
CDS GCA 90 bp GCTGCAGCCTGGTTGACCTGGTATTGGGCAGCCTTGATCTTGGCTTaGAGGTGTGCGGGAGGATGGAAGTATTTGCACTTTTCCCGAGAG +
Preference number: 5 (lower is better)
Translates to: AAAWLTWYWAALILA*RCAGGWKYLHFSRE
Trigger: CTCTCGGGAAAAGTGCAAATACTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS GCA 90 bp TACAGCTTGAGGAATTCCCATGGCAGCTGCAGTAGCTGCAGCCTGTaGTGCTGCAGCCTGGTTGACCTGGTATTGGGCAGCCTTGATCTT +
Preference number: 5 (lower is better)
Translates to: YSLRNSHGSCSSCSL*CCSLVDLVLGSLDL
Trigger: AAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCCATGGGAATTCCTCAAGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTAGCTTCCCAGGTCAAAGGTaGCCTCGAGGGGTCGCTTCA +
Preference number: 5 (lower is better)
Translates to: VLSADEGGWVAGKCNISSFPGQR*PRGVAS
Trigger: TGAAGCGACCCCTCGAGGCAACCTTTGACCTGGGAA...GCTACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS GCA 90 bp TGCTGTCAGCAGGATGAGCAAACCGACAGTCATTTTCTCCTCTGTTaGAATTGCCACGCTGGTACTCTCGACACACCACGGGCTGCAACG +
Preference number: 5 (lower is better)
Translates to: CCQQDEQTDSHFLLC*NCHAGTLDTPRAAT
Trigger: CGTTGCAGCCCGTGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTCATCCTGCTGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194201.6
CDS CCA 90 bp ATTGTTGCATTATGTTCACGGGCTGCAACGGGGCACCGGGCATCATaGCATTGGCTAACTGCATTTGCTGGGCCAGCATGGCCATGTTCT +
Preference number: 5 (lower is better)
Translates to: IVALCSRAATGHRAS*HWLTAFAGPAWPCS
Trigger: AGAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGAACATAATGCAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192757.6
CDS GCA 90 bp CAGCAGGATGAGCAAACCGACAGTCATTTTCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGACACACCTCCAGTCTGTCTGTCCGCA +
Preference number: 5 (lower is better)
Translates to: QQDEQTDSHFLLCCN*HAGTLDTPPVCLSA
Trigger: TGCGGACAGACAGACTGGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTCATCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTCTGCTGGAACCAGGCTaGGGGAAACAGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: ALSALTAILNTRCTLVTCLLEPG*GKQAPG
Trigger: ACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAG...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATCTGCTGGAACCAGGCTaGGGGAAACAGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNLLEPG*GKQAPG
Trigger: ACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAG...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTTTGTGGCAGATGTTGTaGCTGCGGACACAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFLWQML*LRTQWL
Trigger: CAGCCACTGTGTCCGCAGCAACAACATCTGCCACAA...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS GCA 90 bp TGCTGTCAGCAGGATGAGCAAACCGACAGTCATTTTCTCCTCTGTTaGAATTGCCACGCTGGTACTCTCGACACACCTCCAGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: CCQQDEQTDSHFLLC*NCHAGTLDTPPVCL
Trigger: CAGACAGACTGGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTCATCCTGCTGACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTCCGGGCATCATGGCATaGGCTAACTGCATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGPGIMA*ANCICW
Trigger: CCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGG...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGTGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: ILLSNKNDSACALSALTAWAALI*ACRCAG
Trigger: TCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCA...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATTGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNWAALI*ACRCAG
Trigger: TCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCA...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTTGTGGCAGATGTTGTaGCTGCGGACACAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGLWQML*LRTQWL
Trigger: CAGCCACTGTGTCCGCAGCAACAACATCTGCCACAA...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ACTGTCCTTTCGGCAGATGAAGGTGGGTGGGTTGCTGGTAAGTGCAACATCAGTATTATGGGTATCTGGTaGGCTGTGGCTGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: TVLSADEGGWVAGKCNISIMGIW*AVAVAA
Trigger: CGCTGCAACAGCCACAGCCAACCAGATACCCATAAT...ACTGATGTTGCACTTACCAGCAACCCACCCACCTTCATCTGCCGAAAGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099087.8
ENSMUST00000193517.6
CDS-3UTR CAA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCCCGGGCATCATGGCATaGGCTAACTGCATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: NDSACALSALTAILNTRCPGIMA*ANCICW
Trigger: CCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGG...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACACTGCTGGAACCAGGCTaGGGGAAACAGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: NKNDSACALSALTAILNTLLEPG*GKQAPG
Trigger: ACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAG...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCCTGCTGGAACCAGGCTaGGGGAAACAGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: AILELLNRAKIAFPSCNILLEPG*GKQAPG
Trigger: ACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAG...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CAA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTCTCCTCTGTTGCAATaGCCACGCTGGTACTCTCGA +
Preference number: 5 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGSPLLQ*PRWYSR
Trigger: TCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGA...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTAGCCTTGATCTTGGCTaGCAGGTGTGCGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: ALSALTAILNTRCTLVTCSLDLG*QVCGRM
Trigger: CATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCT...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTGGTATTGGGCAGCCTaGATCTTGGCTTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGWYWAA*ILACRC
Trigger: ACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCA...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TTCTCCCATTCCACACTAGAACTGCCAGTGACCTGGCCCCTACTCAGCGATTTTCACTGGTGGCTAAGCTaGGTGCAACTGAAAACATTG +
Preference number: 5 (lower is better)
Translates to: FSHSTLELPVTWPLLSDFHWWLS*VQLKTL
Trigger: CAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTG...AAAATCGCTGAGTAGGGGCCAGGTCACTGGCAGTTCTAGTGTGGAATGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CAA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTGCTGGAACCAGGCTaGGGGAAACAGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWLLEPG*GKQAPG
Trigger: ACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAG...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCAGCCTTGATCTTGGCTaGCAGGTGTGCGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFSLDLG*QVCGRM
Trigger: CATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCT...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACTGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYWAALI*ACRCAG
Trigger: TCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCA...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGTGGTATTGGGCAGCCTaGATCTTGGCTTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLWYWAA*ILACRC
Trigger: ACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCA...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTTGGGGGAAGTACAGCTaGAGGAATTCCCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRWGKYS*RNSHGS
Trigger: GCTGCCATGGGAATTCCTCAAGCTGTACTTCCCCCA...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGCAAGAGCAGGCCTCTTaGGCAATGGGGGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWQEQAS*AMGEVQ
Trigger: CTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTG...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGCAAGAGCAGGCCTCTTaGGCAATGGGGGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: ILLSNKNDSACALSALTAQEQAS*AMGEVQ
Trigger: CTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTG...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS GCA 90 bp GTAGCACCGTGCACCATGGGAACTGGTGGGAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCTAGAGCCTGTTGGTATTGGAAAATA +
Preference number: 5 (lower is better)
Translates to: VAPCTMGTGGRNAVC*CNCMLARACWYWKI
Trigger: TATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGTTCCCATGGTGCACGGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAAGCCTTGATCTTGGCTaGCAGGTGTGCGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTSLDLG*QVCGRM
Trigger: CATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCT...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCTGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: DRNITSAQIPTECTKCVGWAALI*ACRCAG
Trigger: TCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCA...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGTGGTATTGGGCAGCCTaGATCTTGGCTTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: ILLSNKNDSACALSALTAWYWAA*ILACRC
Trigger: ACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCA...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTCTGGTTGACCTGGTATaGGGCAGCCTTGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGLVDLV*GSLDLG
Trigger: GCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAG...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTCACTTGTGGCAGATGTaGTTGCTGCGGACACAGTGG +
Preference number: 5 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGHLWQM*LLRTQW
Trigger: CCACTGTGTCCGCAGCAACAACATCTGCCACAAGTG...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTATTATGGGTATCTGGTaGGCTGTGGCTGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: ALSALTAILNTRCTLVTCIMGIW*AVAVAA
Trigger: CGCTGCAACAGCCACAGCCAACCAGATACCCATAAT...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTATTATGGGTATCTGGTaGGCTGTGGCTGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRIMGIW*AVAVAA
Trigger: CGCTGCAACAGCCACAGCCAACCAGATACCCATAAT...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTCGTCCATTTTCAACTaGGCAGCTTTTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: CMRALSSNGDFKYKVHLGSSIFN*AAFRRM
Trigger: CATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGA...ACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACACCGGGCATCATGGCATaGGCTAACTGCATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTPGIMA*ANCICW
Trigger: CCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGG...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGCACTGGTGGCTAAGCTaGGTGCAACTGAAAACATTG +
Preference number: 5 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLHWWLS*VQLKTL
Trigger: CAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTG...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCAGCCTTGATCTTGGCTaGCAGGTGTGCGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: DRNITSAQIPTECTKCVGSLDLG*QVCGRM
Trigger: CATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCT...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTATGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLWAALI*ACRCAG
Trigger: TCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCA...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTTGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLWAALI*ACRCAG
Trigger: TCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCA...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTTGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMIWAALI*ACRCAG
Trigger: TCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCA...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTTGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTWAALI*ACRCAG
Trigger: TCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCA...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCCAAGAGCAGGCCTCTTaGGCAATGGGGGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: AILELLNRAKIAFPSCNIQEQAS*AMGEVQ
Trigger: CTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTG...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATTTGTGGCAGATGTTGTaGCTGCGGACACAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYLWQML*LRTQWL
Trigger: CAGCCACTGTGTCCGCAGCAACAACATCTGCCACAA...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACACACTTGTGGCAGATGTaGTTGCTGCGGACACAGTGG +
Preference number: 5 (lower is better)
Translates to: NKNDSACALSALTAILNTHLWQM*LLRTQW
Trigger: CCACTGTGTCCGCAGCAACAACATCTGCCACAAGTG...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp AGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTTTCCCAGGTCAAAGGTaGCCTCGAGGGGTCGCTTCA +
Preference number: 5 (lower is better)
Translates to: RFPCCRFFWLTCNMWMSCFPGQR*PRGVAS
Trigger: TGAAGCGACCCCTCGAGGCAACCTTTGACCTGGGAA...ACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
CDS TCA 90 bp GTGACTGTGTTGTCATTGGTATCAATCATTGTGCTGTCAGCAGGATaGGCAAACCGACAGTCATTTTCTCCTCTGTTGCAATTGCCACGC +
Preference number: 5 (lower is better)
Translates to: VTVLSLVSIIVLSAG*ANRQSFSPLLQLPR
Trigger: GCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTCATCCTGCTGACAGCACAATGATTGATACCAATGACAACACAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS GCA 90 bp TGCACCATGGGAACTGGTGGGAGAAATGCTGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGTTGGTATTGGAAAATACCAGTGTTA +
Preference number: 5 (lower is better)
Translates to: CTMGTGGRNAVCCCN*MLARACWYWKIPVL
Trigger: TAACACTGGTATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGTTCCCATGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS GCA 90 bp CTGAAAACATTGGCTCGACTGTACAGTATTGATAAATGGTATCACTaGCGGTGTAATATGGGGATCCCTCCCACCTCGAAATGCAATCCC +
Preference number: 5 (lower is better)
Translates to: LKTLARLYSIDKWYH*RCNMGIPPTSKCNP
Trigger: GGGATTGCATTTCGAGGTGGGAGGGATCCCCATATTACACCGGCAGTGATACCATTTATCAATACTGTACAGTCGAGCCAATGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192757.6
CDS CCA 90 bp AGAAATGCTGTATGCTGCTGTAACTGCATGTTGGCTAGAGCCTGTTaGTATTGGAAAATACCAGTGTTAAAGACTGCGGTGGCACCGTTG +
Preference number: 5 (lower is better)
Translates to: RNAVCCCNCMLARAC*YWKIPVLKTAVAPL
Trigger: CAACGGTGCCACCGCAGTCTTTAACACTGGTATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCCCGGGCATCATGGCATaGGCTAACTGCATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: DRNITSAQIPTECTKCVGPGIMA*ANCICW
Trigger: CCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGG...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATCTGCTGGAACCAGGCTaGGGGAAACAGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDLLEPG*GKQAPG
Trigger: ACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAG...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTACTGCTGGAACCAGGCTaGGGGAAACAGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: LDRNITSAQIPTECTKCVLLEPG*GKQAPG
Trigger: ACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAG...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACTCTCCTCTGTTGCAATaGCCACGCTGGTACTCTCGA +
Preference number: 5 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYSPLLQ*PRWYSR
Trigger: TCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGA...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp AATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCCATTGGTATCAATCATaGTGCTGTCAGCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: NDSACALSALTAILNTRCHWYQS*CCQQDE
Trigger: CTCATCCTGCTGACAGCACAATGATTGATACCAATG...GCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATGGAGGATGGAAGTATTaGCACTTTTCCCGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNGGWKY*HFSREH
Trigger: ATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCC...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTCCTTAGCCTTGATCTTGGCTaGCAGGTGTGCGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: IYNMANDVVLTLIKHTVLSLDLG*QVCGRM
Trigger: CATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCT...AAGGACAGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACAGCCTTGATCTTGGCTaGCAGGTGTGCGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDSLDLG*QVCGRM
Trigger: CATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCT...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTAGCCTTGATCTTGGCTaGCAGGTGTGCGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMISLDLG*QVCGRM
Trigger: CATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCT...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCCTGGTTGACCTGGTATaGGGCAGCCTTGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: VLLDGIYNMANDVVLTLILVDLV*GSLDLG
Trigger: GCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAG...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGTGGGGGAAGTACAGCTaGAGGAATTCCCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWWGKYS*RNSHGS
Trigger: GCTGCCATGGGAATTCCTCAAGCTGTACTTCCCCCA...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATGTGTCATGCACAATATaGAGCCTGGTGGGAGAAATG +
Preference number: 5 (lower is better)
Translates to: ATVCSRFPCCRFFWLTCNVSCTI*SLVGEM
Trigger: CATTTCTCCCACCAGGCTCAATATTGTGCATGACAC...ATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCTTGTGGCAGATGTTGTaGCTGCGGACACAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: DRNITSAQIPTECTKCVGLWQML*LRTQWL
Trigger: CAGCCACTGTGTCCGCAGCAACAACATCTGCCACAA...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCCACTTGTGGCAGATGTaGTTGCTGCGGACACAGTGG +
Preference number: 5 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLHLWQM*LLRTQW
Trigger: CCACTGTGTCCGCAGCAACAACATCTGCCACAAGTG...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACATGCTGTAACTGCATGTaGGCTAGAGCCATGGCAGCT +
Preference number: 5 (lower is better)
Translates to: NKNDSACALSALTAILNTCCNCM*ARAMAA
Trigger: AGCTGCCATGGCTCTAGCCAACATGCAGTTACAGCA...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000191747.6
ENSMUST00000195817.3
CDS CCA 90 bp TTGGTGCAACTGAAAACATTGGCTCGACTGTACAGTATTGATAAATaGTATCACTGCCGGTGTAATATGGGGATCCCTCCCACCTCGAAA +
Preference number: 5 (lower is better)
Translates to: LVQLKTLARLYSIDK*YHCRCNMGIPPTSK
Trigger: TTTCGAGGTGGGAGGGATCCCCATATTACACCGGCAGTGATACCATTTATCAATACTGTACAGTCGAGCCAATGTTTTCAGTTGCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192757.6
CDS-3UTR CAA 90 bp GCGCTCTCAGCTCTAACGGCGATTTTAAATACAAGGTGCACCTTGGTTACTTGTTCGTCCATTTTCAACTaGGCAGCTTTTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: ALSALTAILNTRCTLVTCSSIFN*AAFRRM
Trigger: CATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGA...ACAAGTAACCAAGGTGCACCTTGTATTTAAAATCGCCGTTAGAGCTGAGAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCCCGGGCATCATGGCATaGGCTAACTGCATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLPGIMA*ANCICW
Trigger: CCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGG...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCCGGGCATCATGGCATaGGCTAACTGCATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTPGIMA*ANCICW
Trigger: CCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGG...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCCACTGGTGGCTAAGCTaGGTGCAACTGAAAACATTG +
Preference number: 5 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFHWWLS*VQLKTL
Trigger: CAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTG...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS-3UTR CAA 90 bp TGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTCTCCTCTGTTGCAATaGCCACGCTGGTACTCTCGA +
Preference number: 5 (lower is better)
Translates to: CMCCLTVYTIWLMTSSLLSPLLQ*PRWYSR
Trigger: TCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGA...GAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGTCTCCTCTGTTGCAATaGCCACGCTGGTACTCTCGA +
Preference number: 5 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWSPLLQ*PRWYSR
Trigger: TCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGA...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCTCTCCTCTGTTGCAATaGCCACGCTGGTACTCTCGA +
Preference number: 5 (lower is better)
Translates to: DRNITSAQIPTECTKCVGSPLLQ*PRWYSR
Trigger: TCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGA...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGCATTGGTATCAATCATaGTGCTGTCAGCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: ILLSNKNDSACALSALTAHWYQS*CCQQDE
Trigger: CTCATCCTGCTGACAGCACAATGATTGATACCAATG...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ACAAAGTGTGTAGGCAACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTGACTGTGTTGTCATaGGTATCAATCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: TKCVGNSVQQVPMLSFLLVTVLS*VSIIVL
Trigger: CAGCACAATGATTGATACCAATGACAACACAGTCAC...CAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTTGCCTACACACTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCAATATGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTGGAGGATGGAAGTATTaGCACTTTTCCCGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: AICGCLVAEGFLYVLLDGGGWKY*HFSREH
Trigger: ATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCC...ACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACATATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATTGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNWAALI*ACRCAG
Trigger: TCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCA...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCTGGTATTGGGCAGCCTaGATCTTGGCTTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: DRNITSAQIPTECTKCVGWYWAA*ILACRC
Trigger: ACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCA...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTACTGGTTGACCTGGTATaGGGCAGCCTTGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLLVDLV*GSLDLG
Trigger: GCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAG...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TCTTTGTATGATTGTTTTGTGACGACAGCTCTACATCTGGGTAACATACTTGTGCTGGTTGACCTGGTATaGGGCAGCCTTGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: SLYDCFVTTALHLGNILVLVDLV*GSLDLG
Trigger: GCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAG...CACAAGTATGTTACCCAGATGTAGAGCTGTCGTCACAAAACAATCATACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000192607.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTCTGGTTGACCTGGTATaGGGCAGCCTTGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMILVDLV*GSLDLG
Trigger: GCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAG...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTTGGGGGAAGTACAGCTaGAGGAATTCCCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMIWGKYS*RNSHGS
Trigger: GCTGCCATGGGAATTCCTCAAGCTGTACTTCCCCCA...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGGGGAAGTACAGCTaGAGGAATTCCCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIWGKYS*RNSHGS
Trigger: GCTGCCATGGGAATTCCTCAAGCTGTACTTCCCCCA...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTACAAGAGCAGGCCTCTTaGGCAATGGGGGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLQEQAS*AMGEVQ
Trigger: CTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTG...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTTACTTAGCAATGATTCAAGAGCAGGCCTCTTaGGCAATGGGGGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: VCQDCCHSNNLTSYLAMIQEQAS*AMGEVQ
Trigger: CTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTG...AATCATTGCTAAGTAAGAAGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACCACTTGTGGCAGATGTaGTTGCTGCGGACACAGTGG +
Preference number: 5 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDHLWQM*LLRTQW
Trigger: CCACTGTGTCCGCAGCAACAACATCTGCCACAAGTG...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGCACTTGTGGCAGATGTaGTTGCTGCGGACACAGTGG +
Preference number: 5 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSHLWQM*LLRTQW
Trigger: CCACTGTGTCCGCAGCAACAACATCTGCCACAAGTG...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp CCAGCTGAAAAATCCTGGCAAACTACAAGCTGTCCACAAAAAGCAAAGCGACGTATCTGGGTAACATACTaGTGGCTAGTCAGATGTTCG +
Preference number: 5 (lower is better)
Translates to: PAEKSWQTTSCPQKAKRRIWVTY*WLVRCS
Trigger: CGAACATCTGACTAGCCACAAGTATGTTACCCAGAT...ACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAGGATTTTTCAGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATCTGGGTAACATACTaGTGGCTAGTCAGATGTTCG +
Preference number: 5 (lower is better)
Translates to: ILLSNKNDSACALSALTAIWVTY*WLVRCS
Trigger: CGAACATCTGACTAGCCACAAGTATGTTACCCAGAT...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTTTCCCAGGTCAAAGGTaGCCTCGAGGGGTCGCTTCA +
Preference number: 5 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTFPGQR*PRGVAS
Trigger: TGAAGCGACCCCTCGAGGCAACCTTTGACCTGGGAA...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194069.6
CDS GCA 90 bp CACAATATTGAGCCTGGTGGGAGAAATGCTGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGTTGGTATTGGAAAATACCAGTGTTA +
Preference number: 5 (lower is better)
Translates to: HNIEPGGRNAVCCCN*MLARACWYWKIPVL
Trigger: TAACACTGGTATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGGCTCAATATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000193647.6
CDS GCA 90 bp GTTCGGCAGATATTATGGGTATCTGGTGGGAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCTAGAGCCTGTTGGTATTGGAAAATA +
Preference number: 5 (lower is better)
Translates to: VRQILWVSGGRNAVC*CNCMLARACWYWKI
Trigger: TATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGATACCCATAATATCTGCCGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194069.6
CDS-3UTR CAA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCCATTGGTATCAATCATaGTGCTGTCAGCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFHWYQS*CCQQDE
Trigger: CTCATCCTGCTGACAGCACAATGATTGATACCAATG...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp AACAGTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGGAGGATGGAAGTATTaGCACTTTTCCCGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: NSVQQVPMLSFLLVNMQYGGWKY*HFSREH
Trigger: ATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCC...ATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGTATTGGGCAGCCTaGATCTTGGCTTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIWYWAA*ILACRC
Trigger: ACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCA...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp CATCTGATGACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTCTGGTTGACCTGGTATaGGGCAGCCTTGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: HLMTVLFSLFRVTILNVTLVDLV*GSLDLG
Trigger: GCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAG...AGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGTCATCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGCTGGTTGACCTGGTATaGGGCAGCCTTGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKLVDLV*GSLDLG
Trigger: GCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAG...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCAAGAGCAGGCCTCTTaGGCAATGGGGGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSQEQAS*AMGEVQ
Trigger: CTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTG...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAGTGTCATGCACAATATaGAGCCTGGTGGGAGAAATG +
Preference number: 5 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTVSCTI*SLVGEM
Trigger: CATTTCTCCCACCAGGCTCAATATTGTGCATGACAC...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp AGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGATTATGGGTATCTGGTaGGCTGTGGCTGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: RDFCMCCLTVYTIWLMTSIMGIW*AVAVAA
Trigger: CGCTGCAACAGCCACAGCCAACCAGATACCCATAAT...CGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTATTATGGGTATCTGGTaGGCTGTGGCTGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTIMGIW*AVAVAA
Trigger: CGCTGCAACAGCCACAGCCAACCAGATACCCATAAT...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGCTGTAACTGCATGTaGGCTAGAGCCATGGCAGCT +
Preference number: 5 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTICCNCM*ARAMAA
Trigger: AGCTGCCATGGCTCTAGCCAACATGCAGTTACAGCA...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000191747.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCACTGGTGGCTAAGCTaGGTGCAACTGAAAACATTG +
Preference number: 5 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWHWWLS*VQLKTL
Trigger: CAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTG...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTTCTCCTCTGTTGCAATaGCCACGCTGGTACTCTCGA +
Preference number: 5 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSSPLLQ*PRWYSR
Trigger: TCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGA...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACCATTGGTATCAATCATaGTGCTGTCAGCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYHWYQS*CCQQDE
Trigger: CTCATCCTGCTGACAGCACAATGATTGATACCAATG...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp AACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGATTTTAAATACACATTGGTATCAATCATaGTGCTGTCAGCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: NKNDSACALSALTAILNTHWYQS*CCQQDE
Trigger: CTCATCCTGCTGACAGCACAATGATTGATACCAATG...TGTATTTAAAATCGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCGATTTTAGAACTGCTGAACAGAGCAAAAATAGCCTTTCCTAGCTGCAACATCCATTGGTATCAATCATaGTGCTGTCAGCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: AILELLNRAKIAFPSCNIHWYQS*CCQQDE
Trigger: CTCATCCTGCTGACAGCACAATGATTGATACCAATG...GATGTTGCAGCTAGGAAAGGCTATTTTTGCTCTGTTCAGCAGTTCTAAAATCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TGGCCCAATGGAGTTTTGTCAGTCATGAGATCTTGGAAGGATGGCAAATCTTTCGTGACTGTGTTGTCATaGGTATCAATCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: WPNGVLSVMRSWKDGKSFVTVLS*VSIIVL
Trigger: CAGCACAATGATTGATACCAATGACAACACAGTCAC...GAAAGATTTGCCATCCTTCCAAGATCTCATGACTGACAAAACTCCATTGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ATATTACTCTCAAACAAAAATGACTCTGCATGCGCGCTCTCAGCTCTAACGGCGCAGACAGTGACTGTGTaGTCATTGGTATCAATCATT +
Preference number: 5 (lower is better)
Translates to: ILLSNKNDSACALSALTAQTVTV*SLVSII
Trigger: AATGATTGATACCAATGACAACACAGTCACTGTCTG...CGCCGTTAGAGCTGAGAGCGCGCATGCAGAGTCATTTTTGTTTGAGAGTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTGTGCAGCAGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGCAGACAGTGACTGTGTaGTCATTGGTATCAATCATT +
Preference number: 5 (lower is better)
Translates to: VCSRFPCCRFFWLTCNMWQTVTV*SLVSII
Trigger: AATGATTGATACCAATGACAACACAGTCACTGTCTG...CCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCTGCTGCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGGGAGGATGGAAGTATTaGCACTTTTCCCGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWGGWKY*HFSREH
Trigger: ATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCC...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCGGAGGATGGAAGTATTaGCACTTTTCCCGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: DRNITSAQIPTECTKCVGGGWKY*HFSREH
Trigger: ATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCC...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGGAGGATGGAAGTATTaGCACTTTTCCCGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTGGWKY*HFSREH
Trigger: ATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCC...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTGGAGGATGGAAGTATTaGCACTTTTCCCGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSGGWKY*HFSREH
Trigger: ATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCC...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ACAGTGCTGTTCTCTTTGTTTAGAGTCACTATTTTGAATGTGACTGTGATGAAGTGGTATTGGGCAGCCTaGATCTTGGCTTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: TVLFSLFRVTILNVTVMKWYWAA*ILACRC
Trigger: ACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCA...CTTCATCACAGTCACATTCAAAATAGTGACTCTAAACAAAGAGAACAGCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTCTGGTTGACCTGGTATaGGGCAGCCTTGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTLVDLV*GSLDLG
Trigger: GCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAG...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATCTGGTTGACCTGGTATaGGGCAGCCTTGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNLVDLV*GSLDLG
Trigger: GCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAG...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTACAAGAGCAGGCCTCTTaGGCAATGGGGGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: LDRNITSAQIPTECTKCVQEQAS*AMGEVQ
Trigger: CTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTG...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTGTGTCATGCACAATATaGAGCCTGGTGGGAGAAATG +
Preference number: 5 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSVSCTI*SLVGEM
Trigger: CATTTCTCCCACCAGGCTCAATATTGTGCATGACAC...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCGTGTCATGCACAATATaGAGCCTGGTGGGAGAAATG +
Preference number: 5 (lower is better)
Translates to: DRNITSAQIPTECTKCVGVSCTI*SLVGEM
Trigger: CATTTCTCCCACCAGGCTCAATATTGTGCATGACAC...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTTGTGGCAGATGTTGTaGCTGCGGACACAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTLWQML*LRTQWL
Trigger: CAGCCACTGTGTCCGCAGCAACAACATCTGCCACAA...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATTGTGGCAGATGTTGTaGCTGCGGACACAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPLWQML*LRTQWL
Trigger: CAGCCACTGTGTCCGCAGCAACAACATCTGCCACAA...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACATCTGGGTAACATACTaGTGGCTAGTCAGATGTTCG +
Preference number: 5 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYIWVTY*WLVRCS
Trigger: CGAACATCTGACTAGCCACAAGTATGTTACCCAGAT...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS GCA 90 bp ATATTATGGGTATCTGGTGGGAGAAATGCTGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGTTGGTATTGGAAAATACCAGTGTTA +
Preference number: 5 (lower is better)
Translates to: ILWVSGGRNAVCCCN*MLARACWYWKIPVL
Trigger: TAACACTGGTATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGATACCCATAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194069.6
CDS-3UTR CAA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACCACTGGTGGCTAAGCTaGGTGCAACTGAAAACATTG +
Preference number: 5 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDHWWLS*VQLKTL
Trigger: CAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTG...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATACACTGGTGGCTAAGCTaGGTGCAACTGAAAACATTG +
Preference number: 5 (lower is better)
Translates to: DVLWLRDFCMCCLTVYTIHWWLS*VQLKTL
Trigger: CAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTG...TATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TCAAAATATTACTCAATTGTCTGCCAGGATTGTTGCCATAGCAACAACTTAACTTCTCCTCTGTTGCAATaGCCACGCTGGTACTCTCGA +
Preference number: 5 (lower is better)
Translates to: SKYYSIVCQDCCHSNNLTSPLLQ*PRWYSR
Trigger: TCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGA...AGTTAAGTTGTTGCTATGGCAACAATCCTGGCAGACAATTGAGTAATATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATTCTCCTCTGTTGCAATaGCCACGCTGGTACTCTCGA +
Preference number: 5 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDSPLLQ*PRWYSR
Trigger: TCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGA...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACCATTGGTATCAATCATaGTGCTGTCAGCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHHWYQS*CCQQDE
Trigger: CTCATCCTGCTGACAGCACAATGATTGATACCAATG...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTCATTGGTATCAATCATaGTGCTGTCAGCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: GLQTYQYIIESWSHHSLSHWYQS*CCQQDE
Trigger: CTCATCCTGCTGACAGCACAATGATTGATACCAATG...AGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAGTGACTGTGTTGTCATaGGTATCAATCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTVTVLS*VSIIVL
Trigger: CAGCACAATGATTGATACCAATGACAACACAGTCAC...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAGGAGGATGGAAGTATTaGCACTTTTCCCGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLGGWKY*HFSREH
Trigger: ATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCC...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATTGGTATTGGGCAGCCTaGATCTTGGCTTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDWYWAA*ILACRC
Trigger: ACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCA...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATTGGTATTGGGCAGCCTaGATCTTGGCTTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNWYWAA*ILACRC
Trigger: ACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCA...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGGCATCTGGGTAACATACTaGTGGCTAGTCAGATGTTCG +
Preference number: 5 (lower is better)
Translates to: DRNITSAQIPTECTKCVGIWVTY*WLVRCS
Trigger: CGAACATCTGACTAGCCACAAGTATGTTACCCAGAT...GCCTACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTTCGTCCATTTTCAACTaGGCAGCTTTTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: LYVLLDGIYNMANDVVLTSSIFN*AAFRRM
Trigger: CATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGA...AGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACTCGTCCATTTTCAACTaGGCAGCTTTTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDSSIFN*AAFRRM
Trigger: CATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGA...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp ACTTGGAAGTATGGAAAGTTCTATAACAGAACTCTCACTTCTCCCATTCCACACGTGACTGTGTTGTCATaGGTATCAATCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: TWKYGKFYNRTLTSPIPHVTVLS*VSIIVL
Trigger: CAGCACAATGATTGATACCAATGACAACACAGTCAC...GTGTGGAATGGGAGAAGTGAGAGTTCTGTTATAGAACTTTCCATACTTCCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp GACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCAAGCACACTGTGACTGTGTTGTCATaGGTATCAATCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: DGIYNMANDVVLTLIKHTVTVLS*VSIIVL
Trigger: CAGCACAATGATTGATACCAATGACAACACAGTCAC...AGTGTGCTTGATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TGTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACCAGACAGTGACTGTGTaGTCATTGGTATCAATCATT +
Preference number: 5 (lower is better)
Translates to: CGCLVAEGFLYVLLDGIYQTVTV*SLVSII
Trigger: AATGATTGATACCAATGACAACACAGTCACTGTCTG...GTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTGGATGTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACACAGACAGTGACTGTGTaGTCATTGGTATCAATCATT +
Preference number: 5 (lower is better)
Translates to: VDVLWLRDFCMCCLTVYTQTVTV*SLVSII
Trigger: AATGATTGATACCAATGACAACACAGTCACTGTCTG...TGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGACATCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATCTGGGTAACATACTaGTGGCTAGTCAGATGTTCG +
Preference number: 5 (lower is better)
Translates to: LWLRDFCMCCLTVYTIWLIWVTY*WLVRCS
Trigger: CGAACATCTGACTAGCCACAAGTATGTTACCCAGAT...TAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATCACTGGTGGCTAAGCTaGGTGCAACTGAAAACATTG +
Preference number: 5 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNHWWLS*VQLKTL
Trigger: CAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTG...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCTAATGACGTGACTGTGTTGTCATaGGTATCAATCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AEGFLYVLLDGIYNMANDVTVLS*VSIIVL
Trigger: CAGCACAATGATTGATACCAATGACAACACAGTCAC...GTCATTAGCCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp AGGTTCCCATGTTGTCGTTTCTTCTGGTTAACATGCAATATGTGGATGTCTTGTCAGACAGTGACTGTGTaGTCATTGGTATCAATCATT +
Preference number: 5 (lower is better)
Translates to: RFPCCRFFWLTCNMWMSCQTVTV*SLVSII
Trigger: AATGATTGATACCAATGACAACACAGTCACTGTCTG...ACAAGACATCCACATATTGCATGTTAACCAGAAGAAACGACAACATGGGAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTGTTGCTTGACGGTATATACAATATGGCTAATGACGTCGTCCTTACTCTAATCCAGACAGTGACTGTGTaGTCATTGGTATCAATCATT +
Preference number: 5 (lower is better)
Translates to: VLLDGIYNMANDVVLTLIQTVTV*SLVSII
Trigger: AATGATTGATACCAATGACAACACAGTCACTGTCTG...GATTAGAGTAAGGACGACGTCATTAGCCATATTGTATATACCGTCAAGCAACAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp GTCTTGTGGCTGAGGGATTTTTGTATGTGTTGCTTGACGGTATATACAATATGGCAGACAGTGACTGTGTaGTCATTGGTATCAATCATT +
Preference number: 5 (lower is better)
Translates to: VLWLRDFCMCCLTVYTIWQTVTV*SLVSII
Trigger: AATGATTGATACCAATGACAACACAGTCACTGTCTG...CCATATTGTATATACCGTCAAGCAACACATACAAAAATCCCTCAGCCACAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCAGGAGGATGGAAGTATTaGCACTTTTCCCGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPGGWKY*HFSREH
Trigger: ATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCC...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATGGCATGAATGTGTCATGCACAATATaGAGCCTGGTGGGAGAAATG +
Preference number: 5 (lower is better)
Translates to: YIIESWSHHSLSFQDGMNVSCTI*SLVGEM
Trigger: CATTTCTCCCACCAGGCTCAATATTGTGCATGACAC...ATTCATGCCATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ACGTACCAATACATAATAGAATCATGGTCACACCATAGTCTGTCTTTTCAAGATTCGTCCATTTTCAACTaGGCAGCTTTTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: TYQYIIESWSHHSLSFQDSSIFN*AAFRRM
Trigger: CATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGA...ATCTTGAAAAGACAGACTATGGTGTGACCATGATTCTATTATGTATTGGTACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTACATTGGTATCAATCATaGTGCTGTCAGCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: LDRNITSAQIPTECTKCVHWYQS*CCQQDE
Trigger: CTCATCCTGCTGACAGCACAATGATTGATACCAATG...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp TATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCATAGTGTGACTGTGTTGTCATaGGTATCAATCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: YLGLQTYQYIIESWSHHSVTVLS*VSIIVL
Trigger: CAGCACAATGATTGATACCAATGACAACACAGTCAC...ACTATGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp CAGTTCCCTCCCTCACCATGTCGTACAATCTATTACAGTAAAAATATTACTCTCCAGACAGTGACTGTGTaGTCATTGGTATCAATCATT +
Preference number: 5 (lower is better)
Translates to: QFPPSPCRTIYYSKNITLQTVTV*SLVSII
Trigger: AATGATTGATACCAATGACAACACAGTCACTGTCTG...GAGAGTAATATTTTTACTGTAATAGATTGTACGACATGGTGAGGGAGGGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCAATCTGGGTAACATACTaGTGGCTAGTCAGATGTTCG +
Preference number: 5 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPIWVTY*WLVRCS
Trigger: CGAACATCTGACTAGCCACAAGTATGTTACCCAGAT...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194201.6
CDS-3UTR CAA 90 bp TTAGATAGGAATATCACCTCAGCACAAATACCAACTGAATGTACAAAGTGTGTAGTGACTGTGTTGTCATaGGTATCAATCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LDRNITSAQIPTECTKCVVTVLS*VSIIVL
Trigger: CAGCACAATGATTGATACCAATGACAACACAGTCAC...TACACACTTTGTACATTCAGTTGGTATTTGTGCTGAGGTGATATTCCTATCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS-3UTR CAA 90 bp ATTATATCTTGGTCTACAGACGTACCAATACATAATAGAATCATGGTCACACCACAGACAGTGACTGTGTaGTCATTGGTATCAATCATT +
Preference number: 5 (lower is better)
Translates to: IISWSTDVPIHNRIMVTPQTVTV*SLVSII
Trigger: AATGATTGATACCAATGACAACACAGTCACTGTCTG...TGGTGTGACCATGATTCTATTATGTATTGGTACGTCTGTAGACCAAGATATAAT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS CAA 72 bp GGCACGGGCTGCAACGGGGCACCGGGCATCATGGCATaGGCTAACTGCATTTGCTGGGCCAGCATGGCCATG +
Preference number: 6 (lower is better)
Translates to: GTGCNGAPGIMA*ANCICWASMAM
Trigger: CATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195077.6
CDS CCA 72 bp GCACGGGCTGCAACGGGGCACCGGGCATCATGGCATTaGCTAACTGCATTTGCTGGGCCAGCATGGCCATGT +
Preference number: 6 (lower is better)
Translates to: ARAATGHRASWH*LTAFAGPAWPC
Trigger: ACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195077.6
CDS CCA 72 bp CCACGGGCTGCAACGGGGCACCGGGCATCATGGCATTaGCTAACTGCATTTGCTGGGCCAGCATGGCCATGT +
Preference number: 6 (lower is better)
Translates to: PRAATGHRASWH*LTAFAGPAWPC
Trigger: ACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194201.6
CDS CAA 72 bp ACCACGGGCTGCAACGGGGCACCGGGCATCATGGCATaGGCTAACTGCATTTGCTGGGCCAGCATGGCCATG +
Preference number: 6 (lower is better)
Translates to: TTGCNGAPGIMA*ANCICWASMAM
Trigger: CATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194201.6
CDS CCA 72 bp TCACGGGCTGCAACGGGGCACCGGGCATCATGGCATTaGCTAACTGCATTTGCTGGGCCAGCATGGCCATGT +
Preference number: 6 (lower is better)
Translates to: SRAATGHRASWH*LTAFAGPAWPC
Trigger: ACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192757.6
CDS CAA 72 bp TTCACGGGCTGCAACGGGGCACCGGGCATCATGGCATaGGCTAACTGCATTTGCTGGGCCAGCATGGCCATG +
Preference number: 6 (lower is better)
Translates to: FTGCNGAPGIMA*ANCICWASMAM
Trigger: CATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192757.6
CDS CAA 90 bp TCTCGACACACCACGGGCTGCAACGGGGCACCGGGCATCATGGCATaGGCTAACTGCATTTGCTGGGCCAGCATGGCCATGTTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SRHTTGCNGAPGIMA*ANCICWASMAMFFC
Trigger: GCAGAAGAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGGTGTGTCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194201.6
CDS TCA 72 bp CGGCAGCTGCTGGCACTGGAACTCCAGGATTCCCCGTaGCCAACATTGGTGCAGTCGGCAAGATCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: RQLLALELQDSP*PTLVQSARSLL
Trigger: CAGCAGAGATCTTGCCGACTGCACCAATGTTGGTCACGGGGAATCCTGGAGTTCCAGTGCCAGCAGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000195077.6
ENSMUST00000195817.3
CDS CAA 72 bp GCTGCTGCAGCCTGGTTGACCTGGTATTGGGCAGCCTaGATCTTGGCTTGCAGGTGTGCGGGAGGATGGAAG +
Preference number: 6 (lower is better)
Translates to: AAAAWLTWYWAA*ILACRCAGGWK
Trigger: CTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS CAA 90 bp TGCAGTAGCTGCAGCCTGTGCTGCTGCAGCCTGGTTGACCTGGTATaGGGCAGCCTTGATCTTGGCTTGCAGGTGTGCGGGAGGATGGAA +
Preference number: 6 (lower is better)
Translates to: CSSCSLCCCSLVDLV*GSLDLGLQVCGRME
Trigger: TTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS CAA 90 bp GAAAACATTGGCACGGGCTGCAACGGGGCACCGGGCATCATGGCATaGGCTAACTGCATTTGCTGGGCCAGCATGGCCATGTTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: ENIGTGCNGAPGIMA*ANCICWASMAMFFC
Trigger: GCAGAAGAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGCCAATGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000195077.6
CDS CAA 90 bp GCAGCCTGTGCTGCTGCAGCCTGGTTGACCTGGTATTGGGCAGCCTaGATCTTGGCTTGCAGGTGTGCGGGAGGATGGAAGTATTTGCAC +
Preference number: 6 (lower is better)
Translates to: AACAAAAWLTWYWAA*ILACRCAGGWKYLH
Trigger: GTGCAAATACTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS GCA 72 bp TGCAACGGGGCACCGGGCATCATGGCATTGGCTAACTaGATTTGCTGGGCCAGCATGGCCATGTTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: CNGAPGIMALAN*ICWASMAMFFC
Trigger: GCAGAAGAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195077.6
CDS CCA 72 bp GTAGCTGCAGCCTGTGCTGCTGCAGCCTGGTTGACCTaGTATTGGGCAGCCTTGATCTTGGCTTGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: VAAACAAAAWLT*YWAALILACRC
Trigger: ACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS CAA 72 bp ATGCACTGGTGGCTAAGCTTGGTGCAACTGAAAACATaGGCACGGGCTGCAACGGGGCACCGGGCATCATGG +
Preference number: 6 (lower is better)
Translates to: MHWWLSLVQLKT*ARAATGHRASW
Trigger: CCATGATGCCCGGTGCCCCGTTGCAGCCCGTGCCAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000195077.6
ENSMUST00000195817.3
CDS CAA 90 bp TGCATTATGTTCACGGGCTGCAACGGGGCACCGGGCATCATGGCATaGGCTAACTGCATTTGCTGGGCCAGCATGGCCATGTTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: CIMFTGCNGAPGIMA*ANCICWASMAMFFC
Trigger: GCAGAAGAACATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGAACATAATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192757.6
CDS TCA 72 bp TCCCAGGTCAAAGGTTGCCTCGAGGGGTCGCTTCAGTaGTTTGACAGCCGACTGAGTCATGGCAGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: SQVKGCLEGSLQ*FDSRLSHGSCS
Trigger: ACTGCAGCTGCCATGACTCAGTCGGCTGTCAAATCACTGAAGCGACCCCTCGAGGCAACCTTTGACCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
CDS GCA 72 bp CACTGGAACTCCAGGATTCCCCGTGACCAACATTGGTaGAGTCGGCAAGATCTCTGCTGGAACCAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: HWNSRIPRDQHW*SRQDLCWNQAW
Trigger: CCAAGCCTGGTTCCAGCAGAGATCTTGCCGACTGCACCAATGTTGGTCACGGGGAATCCTGGAGTTCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000195077.6
ENSMUST00000195817.3
CDS CCA 72 bp TGGCACTGGAACTCCAGGATTCCCCGTGACCAACATTaGTGCAGTCGGCAAGATCTCTGCTGGAACCAGGCT +
Preference number: 6 (lower is better)
Translates to: WHWNSRIPRDQH*CSRQDLCWNQA
Trigger: AGCCTGGTTCCAGCAGAGATCTTGCCGACTGCACCAATGTTGGTCACGGGGAATCCTGGAGTTCCAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000195077.6
ENSMUST00000195817.3
CDS CCA 72 bp CGACAGTCATTTTCTCCTCTGTTGCAATTGCCACGCTaGTACTCTCGACACACCACGGGCTGCAACGGGGCA +
Preference number: 6 (lower is better)
Translates to: RQSFSPLLQLPR*YSRHTTGCNGA
Trigger: TGCCCCGTTGCAGCCCGTGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194201.6
CDS TCA 72 bp AGAGCAGGCCTCTTTGGCAATGGGGGAAGTACAGCTTaGGGAATTCCCAGGTCAAAGGTTGCCTCGAGGGGT +
Preference number: 6 (lower is better)
Translates to: RAGLFGNGGSTA*GIPRSKVASRG
Trigger: ACCCCTCGAGGCAACCTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
CDS CCA 72 bp GCAGCCTTGATCTTGGCTTGCAGGTGTGCGGGAGGATaGAAGTATTTGCACTTTTCCCGAGAGCATCTCCCC +
Preference number: 6 (lower is better)
Translates to: AALILACRCAGG*KYLHFSREHLP
Trigger: GGGGAGATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS CAA 72 bp GCAGCCTGGTTGACCTGGTATTGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGAGGATGGAAGTATTTG +
Preference number: 6 (lower is better)
Translates to: AAWLTWYWAALI*ACRCAGGWKYL
Trigger: CAAATACTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS CAA 72 bp GGTGGGAGAAATGCTGTATGCTGCTGTAACTGCATGTaGGCTAGAGCCATGGCAGCTGCAGTAGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: GGRNAVCCCNCM*ARAMAAAVAAA
Trigger: GGCTGCAGCTACTGCAGCTGCCATGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000191747.6
ENSMUST00000195817.3
CDS CAA 90 bp TGCTGCAGCCTGGTTGACCTGGTATTGGGCAGCCTTGATCTTGGCTaGCAGGTGTGCGGGAGGATGGAAGTATTTGCACTTTTCCCGAGA +
Preference number: 6 (lower is better)
Translates to: CCSLVDLVLGSLDLG*QVCGRMEVFALFPR
Trigger: TCTCGGGAAAAGTGCAAATACTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS CAA 90 bp TGTGCTGCTGCAGCCTGGTTGACCTGGTATTGGGCAGCCTTGATCTaGGCTTGCAGGTGTGCGGGAGGATGGAAGTATTTGCACTTTTCC +
Preference number: 6 (lower is better)
Translates to: CAAAAWLTWYWAALI*ACRCAGGWKYLHFS
Trigger: GGAAAAGTGCAAATACTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS GCA 72 bp CCGTGCACCATGGGAACTGGTGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTGGCTAGAGCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: PCTMGTGGRNAV*CCNCMLARACW
Trigger: CCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGTTCCCATGGTGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS GCA 72 bp GAGCCTGGTGGGAGAAATGCTGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCATGGCAGCTGCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: EPGGRNAVCCCN*MLARAMAAAVA
Trigger: AGCTACTGCAGCTGCCATGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000191747.6
ENSMUST00000195817.3
CDS GCA 72 bp GAGCAAACCGACAGTCATTTTCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGACACACCACGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: EQTDSHFLLCCN*HAGTLDTPRAA
Trigger: TGCAGCCCGTGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194201.6
CDS CCA 72 bp CGACAGTCATTTTCTCCTCTGTTGCAATTGCCACGCTaGTACTCTCGACACACCTCCAGTCTGTCTGTCCGC +
Preference number: 6 (lower is better)
Translates to: RQSFSPLLQLPR*YSRHTSSLSVR
Trigger: GCGGACAGACAGACTGGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS GCA 72 bp GAGCAAACCGACAGTCATTTTCTCCTCTGTTGCAATTaGCACGCTGGTACTCTCGACACACCTCCAGTCTGT +
Preference number: 6 (lower is better)
Translates to: EQTDSHFLLCCN*HAGTLDTPPVC
Trigger: ACAGACTGGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000195817.3
CDS GCA 72 bp TGCACCATGGGAACTGGTGGGAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCTAGAGCCTGTTGGTAT +
Preference number: 6 (lower is better)
Translates to: CTMGTGGRNAVC*CNCMLARACWY
Trigger: ATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGTTCCCATGGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS GCA 72 bp CACAATATTGAGCCTGGTGGGAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCTAGAGCCATGGCAGCT +
Preference number: 6 (lower is better)
Translates to: HNIEPGGRNAVC*CNCMLARAMAA
Trigger: AGCTGCCATGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGGCTCAATATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000191747.6
ENSMUST00000195817.3
CDS GCA 72 bp ATGCACAATATTGAGCCTGGTGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTGGCTAGAGCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: MHNIEPGGRNAV*CCNCMLARACW
Trigger: CCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGGCTCAATATTGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000193647.6
CDS GCA 72 bp ATGCACAATATTGAGCCTGGTGGGAGAAATGCTGTATaGTGCTGTAACTGCATGTTGGCTAGAGCCATGGCA +
Preference number: 6 (lower is better)
Translates to: MHNIEPGGRNAV*CCNCMLARAMA
Trigger: TGCCATGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGGCTCAATATTGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000191747.6
ENSMUST00000195817.3
CDS GCA 72 bp GAGCCTGGTGGGAGAAATGCTGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGTTGGTATTGGAAAATA +
Preference number: 6 (lower is better)
Translates to: EPGGRNAVCCCN*MLARACWYWKI
Trigger: TATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000193647.6
CDS GCA 72 bp CACAATATTGAGCCTGGTGGGAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCTAGAGCCTGTTGGTAT +
Preference number: 6 (lower is better)
Translates to: HNIEPGGRNAVC*CNCMLARACWY
Trigger: ATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGGCTCAATATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000192807.6
ENSMUST00000193518.6
ENSMUST00000193647.6
CDS TCA 72 bp CGAAGGATGTGCAAATTTACATTCCGTGTCTGGTCGTaGGCAAGTCCCCCTTTGAAACTCTCTACATACTTC +
Preference number: 6 (lower is better)
Translates to: RRMCKFTFRVWS*ASPPLKLSTYF
Trigger: GAAGTATGTAGAGAGTTTCAAAGGGGGACTTGCTCACGACCAGACACGGAATGTAAATTTGCACATCCTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099087.8
ENSMUST00000192607.6
ENSMUST00000193517.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195077.6
CDS GCA 72 bp GGAACTGGTGGGAGAAATGCTGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGTTGGTATTGGAAAATA +
Preference number: 6 (lower is better)
Translates to: GTGGRNAVCCCN*MLARACWYWKI
Trigger: TATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000193517.6
ENSMUST00000194201.6
CDS CCA 72 bp CTGAAAACATTGGCTCGACTGTACAGTATTGATAAATaGTATCACTGCCGGTGTAATATGGGGATCCCTCCC +
Preference number: 6 (lower is better)
Translates to: LKTLARLYSIDK*YHCRCNMGIPP
Trigger: GGGAGGGATCCCCATATTACACCGGCAGTGATACCATTTATCAATACTGTACAGTCGAGCCAATGTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192757.6
CDS GCA 72 bp GTATCTGGTGGGAGAAATGCTGTATGCTGCTGTAACTaGATGTTGGCTAGAGCCTGTTGGTATTGGAAAATA +
Preference number: 6 (lower is better)
Translates to: VSGGRNAVCCCN*MLARACWYWKI
Trigger: TATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194069.6
CDS GCA 72 bp ATATTATGGGTATCTGGTGGGAGAAATGCTGTATGCTaGTGTAACTGCATGTTGGCTAGAGCCTGTTGGTAT +
Preference number: 6 (lower is better)
Translates to: ILWVSGGRNAVC*CNCMLARACWY
Trigger: ATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGATACCCATAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194069.6
CDS TCA 72 bp TTGTCATTGGTATCAATCATTGTGCTGTCAGCAGGATaGGCAAACCGACAGTCATTTTCTCCTCTGTTGCAA +
Preference number: 6 (lower is better)
Translates to: LSLVSIIVLSAG*ANRQSFSPLLQ
Trigger: TTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTCATCCTGCTGACAGCACAATGATTGATACCAATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000099087.8
ENSMUST00000191747.6
ENSMUST00000192607.6
ENSMUST00000192757.6
ENSMUST00000192807.6
ENSMUST00000193517.6
ENSMUST00000193518.6
ENSMUST00000193647.6
ENSMUST00000194069.6
ENSMUST00000194201.6
ENSMUST00000195817.3
CDS CAA 72 bp ATGCACTGGTGGCTAAGCTTGGTGCAACTGAAAACATaGGCTCGACTGTACAGTATTGATAAATGGTATCAC +
Preference number: 6 (lower is better)
Translates to: MHWWLSLVQLKT*ARLYSIDKWYH
Trigger: GTGATACCATTTATCAATACTGTACAGTCGAGCCAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192757.6