Pregenerated sensors for MBLAC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051098Ensembl transcript IDs: ENSMUST00000057598.7, ENSMUST00000224299.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTAGAAGCTAAGCGAAACAGCCTTTCGGCACCAAAGGTATTGAAGTaGCCAGGAAGCACCTTCTCCACAAGGCCTCGGTCCACCAACTCT | + |
|
Preference number: 1 (lower is better) Translates to: LEAKRNSLSAPKVLK*PGSTFSTRPRSTNS Trigger: AGAGTTGGTGGACCGAGGCCTTGTGGAGAAGGTGCTTCCTGGGCACTTCAATACCTTTGGTGCCGAAAGGCTGTTTCGCTTAGCTTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR TCA 90 bp | TCCAACATAGTCACTGATCCTGCTGTATGGGAGCCAGTCAATCAGTaGTCCATCATACACGACGTCACCACTGAAGAGCACCTTACGGTC | + |
|
Preference number: 1 (lower is better) Translates to: SNIVTDPAVWEPVNQ*SIIHDVTTEEHLTV Trigger: GACCGTAAGGTGCTCTTCAGTGGTGACGTCGTGTATGATGGATCACTGATTGACTGGCTCCCATACAGCAGGATCAGTGACTATGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR TCA 90 bp | AGCACCTTACGGTCTTTATCATGTAAGCAAATACTGCCTCTGGAGTaGCCTGGCATGTGCATAACAGTGAGCTGTCTGTCGCCAAGGTTG | + |
|
Preference number: 1 (lower is better) Translates to: STLRSLSCKQILPLE*PGMCITVSCLSPRL Trigger: CAACCTTGGCGACAGACAGCTCACTGTTATGCACATGCCAGGTCACTCCAGAGGCAGTATTTGCTTACATGATAAAGACCGTAAGGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR TCA 90 bp | ATGGGAGCCAGTCAATCAGTGATCCATCATACACGACGTCACCACTaGAGAGCACCTTACGGTCTTTATCATGTAAGCAAATACTGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: MGASQSVIHHTRRHH*RAPYGLYHVSKYCL Trigger: GAGGCAGTATTTGCTTACATGATAAAGACCGTAAGGTGCTCTTCAGTGGTGACGTCGTGTATGATGGATCACTGATTGACTGGCTCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR GCA 90 bp | GAGCAGGCAAACCTGTGTGCAGTTACTAGCATTGTTTCTAGCCCATaGTGTCTGAGGATGGTCAGTTACCTCCAGGATGCACATTTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: EQANLCAVTSIVSSP*CLRMVSYLQDAHLK Trigger: TTTTAAATGTGCATCCTGGAGGTAACTGACCATCCTCAGACAGCATGGGCTAGAAACAATGCTAGTAACTGCACACAGGTTTGCCTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR TCA 90 bp | ATGCATGGAGCACTTCACAACATTGCCAGGACACACACTCTGAAATaGCAGCATTGGCCAATTGCAAGCTTATTTAAGTGGCTTCTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: MHGALHNIARTHTLK*QHWPIASLFKWLLP Trigger: AGGAAGAAGCCACTTAAATAAGCTTGCAATTGGCCAATGCTGTCATTTCAGAGTGTGTGTCCTGGCAATGTTGTGAAGTGCTCCATGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR CCA 90 bp | GTAAAGTATAAGCACAGAACCCCATATGATTTCCCCCTCATTATCTaGGGAAGTAAACTATGGGACAAGGGCAGTTCTTTGAGATGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: VKYKHRTPYDFPLII*GSKLWDKGSSLRCC Trigger: ACAGCATCTCAAAGAACTGCCCTTGTCCCATAGTTTACTTCCCCAGATAATGAGGGGGAAATCATATGGGGTTCTGTGCTTATACTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR CCA 90 bp | ACCAAAGGTATTGAAGTGCCCAGGAAGCACCTTCTCCACAAGGCCTCGGTCCACGCCTCTGGAGTGACCTaGCATGTGCATAACAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TKGIEVPRKHLLHKASVHASGVT*HVHNSE Trigger: CTCACTGTTATGCACATGCCAGGTCACTCCAGAGGC...GTGGACCGAGGCCTTGTGGAGAAGGTGCTTCCTGGGCACTTCAATACCTTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGGGGCGTGGTCGGGAGCAGGCAAACCTGTGTGCAGTTACTAGCATTGTTTGAGAGCGTACATGCATaGCTGCATGTGTGTCTACTG | + |
|
Preference number: 2 (lower is better) Translates to: RGGVVGSRQTCVQLLALFESVHA*LHVCLL Trigger: CAGTAGACACACATGCAGGCATGCATGTACGCTCTC...AAACAATGCTAGTAACTGCACACAGGTTTGCCTGCTCCCGACCACGCCCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR TCA 90 bp | AGCACCTTCTCCACAAGGCCTCGGTCCACCAACTCTATGAGACGCTCACAAGTTATACTGCCTCTGGAGTaGCCTGGCATGTGCATAACA | + |
|
Preference number: 2 (lower is better) Translates to: STFSTRPRSTNSMRRSQVILPLE*PGMCIT Trigger: TGTTATGCACATGCCAGGTCACTCCAGAGGCAGTAT...AACTTGTGAGCGTCTCATAGAGTTGGTGGACCGAGGCCTTGTGGAGAAGGTGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTAAGCGAAACAGCCTTTCGGCACCAAAGGTATTGAAGTGCCCAGGAAGCACCGGTCCACCAACTCTATaGGACGCTCACAAGTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: AKRNSLSAPKVLKCPGSTGPPTL*DAHKFQ Trigger: TTGGAACTTGTGAGCGTCTCATAGAGTTGGTGGACC...GGTGCTTCCTGGGCACTTCAATACCTTTGGTGCCGAAAGGCTGTTTCGCTTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGGGGCGTGGTCGGGAGCAGGCAAACCTGTGTGCAGTTACTAGCATTGTTTAGCACTTCACAACATTaGCAGGACACACACTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RGGVVGSRQTCVQLLALFSTSQH*QDTHSE Trigger: TTCAGAGTGTGTGTCCTGGCAATGTTGTGAAGTGCT...AAACAATGCTAGTAACTGCACACAGGTTTGCCTGCTCCCGACCACGCCCCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR TCA 90 bp | CGGAGAGCTAAACTTGCAAGAGACCTCATGGCAAAAGTAGACACTTTGTGGCATCGGCACCAAAGGTATTaGAGTGCCCAGGAAGCACCT | + |
|
Preference number: 2 (lower is better) Translates to: RRAKLARDLMAKVDTLWHRHQRY*SAQEAP Trigger: AGGTGCTTCCTGGGCACTTCAATACCTTTGGTGCCG...ATGCCACAAAGTGTCTACTTTTGCCATGAGGTCTCTTGCAAGTTTAGCTCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCTAAGCGAAACAGCCTTTCGGCACCAAAGGTATTGAAGTGCCCAGGAAGCCATGTAAGCAAATACTaGCTCTGGAGTGACCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: EAKRNSLSAPKVLKCPGSHVSKY*LWSDLA Trigger: TGCCAGGTCACTCCAGAGGCAGTATTTGCTTACATG...GCTTCCTGGGCACTTCAATACCTTTGGTGCCGAAAGGCTGTTTCGCTTAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGAGGTCCTAGGATTTGTTACACGGAGAGCTAAACTTGCAAGAGACCTCATGAGCAAATACTGCCTCTaGAGTGACCTGGCATGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GEVLGFVTRRAKLARDLMSKYCL*SDLACA Trigger: TGCACATGCCAGGTCACTCCAGAGGCAGTATTTGCT...CATGAGGTCTCTTGCAAGTTTAGCTCTCCGTGTAACAAATCCTAGGACCTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR-3UTR TCA 90 bp | CGGAGAGCTAAACTTGCAAGAGACCTCATGGCAAAAGTAGACACTTTGTGGCATGAGCCAGTCAATCAGTaGTCCATCATACACGACGTC | + |
|
Preference number: 2 (lower is better) Translates to: RRAKLARDLMAKVDTLWHEPVNQ*SIIHDV Trigger: GACGTCGTGTATGATGGATCACTGATTGACTGGCTC...ATGCCACAAAGTGTCTACTTTTGCCATGAGGTCTCTTGCAAGTTTAGCTCTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR-3UTR TCA 90 bp | GAACTGCTGGTACGGAGTGATCTGAGTTTCAAAAGTGGATCTGTTTGGTCAACAACACACACTCTGAAATaGCAGCATTGGCCAATTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ELLVRSDLSFKSGSVWSTTHTLK*QHWPIA Trigger: TGCAATTGGCCAATGCTGTCATTTCAGAGTGTGTGT...TGTTGACCAAACAGATCCACTTTTGAAACTCAGATCACTCCGTACCAGCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTTTCTGAGTGTCAGCAAAGGTTTATATGGTGGCACATGACAGCTCAGTTCTGCATCCTTAATGCATaGAGCACTTCACAACATTGC | + |
|
Preference number: 2 (lower is better) Translates to: LLSECQQRFIWWHMTAQFCILNA*STSQHC Trigger: GCAATGTTGTGAAGTGCTCCATGCATTAAGGATGCA...GAACTGAGCTGTCATGTGCCACCATATAAACCTTTGCTGACACTCAGAAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGGATGGTCAGTTACCTCCAGGATGCACATTTAAAATGGATCATGAATACTGGGGAAGTAAACTATaGGACAAGGGCAGTTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SEDGQLPPGCTFKMDHEYWGSKL*DKGSSL Trigger: CAAAGAACTGCCCTTGTCCCATAGTTTACTTCCCCA...GTATTCATGATCCATTTTAAATGTGCATCCTGGAGGTAACTGACCATCCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAGGATGGTCAGTTACCTCCAGGATGCACATTTAAAATGGATCATGAATACGGCAGTTCTTTGAGATaGTGTGAGTGCATCCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SEDGQLPPGCTFKMDHEYGSSLR*CECILN Trigger: ATTAAGGATGCACTCACAGCATCTCAAAGAACTGCC...GTATTCATGATCCATTTTAAATGTGCATCCTGGAGGTAACTGACCATCCTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR CCA 90 bp | TTGAACATCCTACATTGTTTAGCACAGTACTGTGTACCTATGTGTAAATGTGGCTTCCCCCTCATTATCTaGGGAAGTAAACTATGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LNILHCLAQYCVPMCKCGFPLII*GSKLWD Trigger: GTCCCATAGTTTACTTCCCCAGATAATGAGGGGGAA...GCCACATTTACACATAGGTACACAGTACTGTGCTAAACAATGTAGGATGTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR GCA 90 bp | CATTGGCCAATTGCAAGCTTATTTAAGTGGCTTCTTCCTCGAAGAAAAGAAAAAAAGCACTTTTTGAAATaGTCACTAGTAACTGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: HWPIASLFKWLLPRRKEKKHFLK*SLVTVS Trigger: GGAAACAGTTACTAGTGAGCATTTCAAAAAGTGCTT...TTTTTCTTTTCTTCGAGGAAGAAGCCACTTAAATAAGCTTGCAATTGGCCAATG 36% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCTGTATTTTCACAGGGTAGCAATAGTGAAATATCGCAATCTTACATTGCAATGATTAAGGACTTTTaGCTTTATTTTGTGCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TSVFSQGSNSEISQSYIAMIKDF*LYFVLL Trigger: CAGCAGCACAAAATAAAGCCAAAAGTCCTTAATCAT...TGCAATGTAAGATTGCGATATTTCACTATTGCTACCCTGTGAAAATACAGAAGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR GCA 72 bp | AAGCGAAACAGCCTTTCGGCACCAAAGGTATTGAAGTaGCCAGGAAGCACCTTCTCCACAAGGCCTCGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KRNSLSAPKVLK*PGSTFSTRPRS Trigger: GGACCGAGGCCTTGTGGAGAAGGTGCTTCCTGGGCACTTCAATACCTTTGGTGCCGAAAGGCTGTTTCGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR TCA 72 bp | AAGCTAAGCGAAACAGCCTTTCGGCACCAAAGGTATTaGAGTGCCCAGGAAGCACCTTCTCCACAAGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KLSETAFRHQRY*SAQEAPSPQGL Trigger: GAGGCCTTGTGGAGAAGGTGCTTCCTGGGCACTTCAATACCTTTGGTGCCGAAAGGCTGTTTCGCTTAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR TCA 72 bp | GTCACTGATCCTGCTGTATGGGAGCCAGTCAATCAGTaGTCCATCATACACGACGTCACCACTGAAGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VTDPAVWEPVNQ*SIIHDVTTEEH Trigger: GTGCTCTTCAGTGGTGACGTCGTGTATGATGGATCACTGATTGACTGGCTCCCATACAGCAGGATCAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR TCA 72 bp | CGGTCTTTATCATGTAAGCAAATACTGCCTCTGGAGTaGCCTGGCATGTGCATAACAGTGAGCTGTCTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: RSLSCKQILPLE*PGMCITVSCLS Trigger: CGACAGACAGCTCACTGTTATGCACATGCCAGGTCACTCCAGAGGCAGTATTTGCTTACATGATAAAGACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR GCA 72 bp | GAGTGCATCCTTAATGCATGGAGCACTTCACAACATTaGCAGGACACACACTCTGAAATGACAGCATTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ECILNAWSTSQH*QDTHSEMTALA Trigger: GGCCAATGCTGTCATTTCAGAGTGTGTGTCCTGGCAATGTTGTGAAGTGCTCCATGCATTAAGGATGCACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR GCA 72 bp | AACCTGTGTGCAGTTACTAGCATTGTTTCTAGCCCATaGTGTCTGAGGATGGTCAGTTACCTCCAGGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: NLCAVTSIVSSP*CLRMVSYLQDA Trigger: TGCATCCTGGAGGTAACTGACCATCCTCAGACAGCATGGGCTAGAAACAATGCTAGTAACTGCACACAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGGGCGTGGTCGGGAGCAGGCAAACCTGTGTGCAGTTACTAGCATTGTTTTTTGAACATCCTACATaGTTTAGCACAGTACTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGGVVGSRQTCVQLLALFFEHPT*FSTVLC Trigger: ACACAGTACTGTGCTAAACAATGTAGGATGTTCAAA...AAACAATGCTAGTAACTGCACACAGGTTTGCCTGCTCCCGACCACGCCCCCTCT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR TCA 72 bp | TCTGGGGAAGTAAACTATGGGACAAGGGCAGTTCTTTaGGATGCTGTGAGTGCATCCTTAATGCATGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SGEVNYGTRAVL*DAVSASLMHGA Trigger: TGCTCCATGCATTAAGGATGCACTCACAGCATCTCAAAGAACTGCCCTTGTCCCATAGTTTACTTCCCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR CCA 72 bp | AGTTCTTTGAGATGCTGTGAGTGCATCCTTAATGCATaGAGCACTTCACAACATTGCCAGGACACACACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSLRCCECILNA*STSQHCQDTHS Trigger: AGAGTGTGTGTCCTGGCAATGTTGTGAAGTGCTCCATGCATTAAGGATGCACTCACAGCATCTCAAAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR CCA 72 bp | TATGATTTCCCCCTCATTATCTGGGGAAGTAAACTATaGGACAAGGGCAGTTCTTTGAGATGCTGTGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: YDFPLIIWGSKL*DKGSSLRCCEC Trigger: GCACTCACAGCATCTCAAAGAACTGCCCTTGTCCCATAGTTTACTTCCCCAGATAATGAGGGGGAAATCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR CCA 72 bp | AAGCACAGAACCCCATATGATTTCCCCCTCATTATCTaGGGAAGTAAACTATGGGACAAGGGCAGTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KHRTPYDFPLII*GSKLWDKGSSL Trigger: CAAAGAACTGCCCTTGTCCCATAGTTTACTTCCCCAGATAATGAGGGGGAAATCATATGGGGTTCTGTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAGGATGGTCAGTTACCTCCAGGATGCACATTTAAAATGGATCATGAATACGACAAGGGCAGTTCTTaGAGATGCTGTGAGTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SEDGQLPPGCTFKMDHEYDKGSS*RCCECI Trigger: GATGCACTCACAGCATCTCAAAGAACTGCCCTTGTC...GTATTCATGATCCATTTTAAATGTGCATCCTGGAGGTAACTGACCATCCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR TCA 72 bp | GCACTTCACAACATTGCCAGGACACACACTCTGAAATaGCAGCATTGGCCAATTGCAAGCTTATTTAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ALHNIARTHTLK*QHWPIASLFKW Trigger: CCACTTAAATAAGCTTGCAATTGGCCAATGCTGTCATTTCAGAGTGTGTGTCCTGGCAATGTTGTGAAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR TCA 72 bp | ATGGAGCACTTCACAACATTGCCAGGACACACACTCTaGAATGACAGCATTGGCCAATTGCAAGCTTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: MEHFTTLPGHTL*NDSIGQLQAYL Trigger: TAAATAAGCTTGCAATTGGCCAATGCTGTCATTTCAGAGTGTGTGTCCTGGCAATGTTGTGAAGTGCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR TCA 72 bp | AGTCAATCAGTGATCCATCATACACGACGTCACCACTaGAGAGCACCTTACGGTCTTTATCATGTAAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SQSVIHHTRRHH*RAPYGLYHVSK Trigger: TTTGCTTACATGATAAAGACCGTAAGGTGCTCTTCAGTGGTGACGTCGTGTATGATGGATCACTGATTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| 3UTR GCA 72 bp | CCCATGCTGTCTGAGGATGGTCAGTTACCTCCAGGATaGACATTTAAAATGGATCATGAATACCAAATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PMLSEDGQLPPG*TFKMDHEYQMS Trigger: ACTCATTTGGTATTCATGATCCATTTTAAATGTGCATCCTGGAGGTAACTGACCATCCTCAGACAGCATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR TCA 72 bp | CTTGACAGAAACAAGAACTGCTGGTACGGAGTGATCTaGGTTTCAAAAGTGGATCTGTTTGGTCAACAATGT | + |
|
Preference number: 3 (lower is better) Translates to: LDRNKNCWYGVI*VSKVDLFGQQC Trigger: ACATTGTTGACCAAACAGATCCACTTTTGAAACTCAGATCACTCCGTACCAGCAGTTCTTGTTTCTGTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR TCA 72 bp | TTTAAGACAACGAATACTGAACAGGAACAGGTGTTGTaGATCAGGATAAGAAGGCCGTTGGCTCTAGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: FKTTNTEQEQVL*IRIRRPLALVN Trigger: ATTAACTAGAGCCAACGGCCTTCTTATCCTGATTCACAACACCTGTTCCTGTTCAGTATTCGTTGTCTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCTGTATTTTCACAGGGTAGCAATAGTGAAATATCGCAATCTTACATTGCATCTGAAATGACAGCATaGGCCAATTGCAAGCTTATT | + |
|
Preference number: 3 (lower is better) Translates to: TSVFSQGSNSEISQSYIASEMTA*ANCKLI Trigger: AATAAGCTTGCAATTGGCCAATGCTGTCATTTCAGA...TGCAATGTAAGATTGCGATATTTCACTATTGCTACCCTGTGAAAATACAGAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR GCA 90 bp | AGAGGGGGCGTGGTCGGGAGCAGGCAAACCTGTGTGCAGTTACTAGCATTGTTTTCTATCACCACGTCCTaGTCCGAGCCGCGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGGVVGSRQTCVQLLALFSITTS*SEPRTS Trigger: GCTGGTGCGCGGCTCGGAGCAGGACGTGGTGATAGA...AAACAATGCTAGTAACTGCACACAGGTTTGCCTGCTCCCGACCACGCCCCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGTATTGAAGTGCCCAGGAAGCACCTTCTCCACAAGGCCTCGGTCCACCTCGCCCAGAGACTTGTaGGCATACCACTCGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PKVLKCPGSTFSTRPRSTSPRDL*AYHSSA Trigger: GGCGCTCGAGTGGTATGCCCACAAGTCTCTGGGCGA...GGTGGACCGAGGCCTTGTGGAGAAGGTGCTTCCTGGGCACTTCAATACCTTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGCACCTTCTCCACAAGGCCTCGGTCCACCAACTCTATGAGACGCTCACAAGCACCAGCCAAATGTTaGCCCGGTTGCCTGACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSTFSTRPRSTNSMRRSQAPAKC*PGCLTR Trigger: ACGAGTCAGGCAACCGGGCCAACATTTGGCTGGTGC...TTGTGAGCGTCTCATAGAGTTGGTGGACCGAGGCCTTGTGGAGAAGGTGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGGGGCGTGGTCGGGAGCAGGCAAACCTGTGTGCAGTTACTAGCATTGTTTATCACATCCCCATCCTaGAGAATGAGGGTGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGGVVGSRQTCVQLLALFITSPS*RMRVGC Trigger: GCAACCCACCCTCATTCTGCAGGATGGGGATGTGAT...AAACAATGCTAGTAACTGCACACAGGTTTGCCTGCTCCCGACCACGCCCCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR CAA 72 bp | GAAGCTAAGCGAAACAGCCTTTCGGCACCAAAGGTATaGAAGTGCCCAGGAAGCACCTTCTCCACAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EAKRNSLSAPKV*KCPGSTFSTRP Trigger: AGGCCTTGTGGAGAAGGTGCTTCCTGGGCACTTCAATACCTTTGGTGCCGAAAGGCTGTTTCGCTTAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| CDS-3UTR TCA 90 bp | ACTTCACAACATTGCCAGGACACACACTCTGAAATGACAGCATTGGCCAATTGCCCCCATCCTGCAGAATaGGGGTGGGTTGCACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSQHCQDTHSEMTALANCPHPAE*GWVALP Trigger: AGGCAGTGCAACCCACCCTCATTCTGCAGGATGGGG...GCAATTGGCCAATGCTGTCATTTCAGAGTGTGTGTCCTGGCAATGTTGTGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CCA 90 bp | ACTTCACAACATTGCCAGGACACACACTCTGAAATGACAGCATTGGCCAATTGCGCACCAGCCAAATGTTaGCCCGGTTGCCTGACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TSQHCQDTHSEMTALANCAPAKC*PGCLTR Trigger: ACGAGTCAGGCAACCGGGCCAACATTTGGCTGGTGC...GCAATTGGCCAATGCTGTCATTTCAGAGTGTGTGTCCTGGCAATGTTGTGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CCA 90 bp | TTGAACATCCTACATTGTTTAGCACAGTACTGTGTACCTATGTGTAAATGTGGCGCACTCGGAACTGCCTaGCCCTCCAGCCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNILHCLAQYCVPMCKCGALGTA*PSSQGW Trigger: CCAGCCCTGGCTGGAGGGCCAGGCAGTTCCGAGTGC...GCCACATTTACACATAGGTACACAGTACTGTGCTAAACAATGTAGGATGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR GCA 90 bp | CATTGGCCAATTGCAAGCTTATTTAAGTGGCTTCTTCCTCGAAGAAAAGAAAAATCGGCCTCGGCGCGGTaGACAGCCACCTGGTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HWPIASLFKWLLPRRKEKSASAR*TATWSN Trigger: GTTCGACCAGGTGGCTGTGCACCGCGCCGAGGCCGA...TTTTTCTTTTCTTCGAGGAAGAAGCCACTTAAATAAGCTTGCAATTGGCCAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CCA 90 bp | CATTGGCCAATTGCAAGCTTATTTAAGTGGCTTCTTCCTCGAAGAAAAGAAAAACGAAGTGCACGTGGGTaGCCACGGCCAGCAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HWPIASLFKWLLPRRKEKRSARG*PRPAVA Trigger: GGCCACTGCTGGCCGTGGCCACCCACGTGCACTTCG...TTTTTCTTTTCTTCGAGGAAGAAGCCACTTAAATAAGCTTGCAATTGGCCAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR TCA 90 bp | GAACTGCTGGTACGGAGTGATCTGAGTTTCAAAAGTGGATCTGTTTGGTCAACACGGCACCAAAGGTATTaGAGTGCCCAGGAAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ELLVRSDLSFKSGSVWSTRHQRY*SAQEAP Trigger: AGGTGCTTCCTGGGCACTTCAATACCTTTGGTGCCG...TGTTGACCAAACAGATCCACTTTTGAAACTCAGATCACTCCGTACCAGCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR TCA 90 bp | ACTTCACAACATTGCCAGGACACACACTCTGAAATGACAGCATTGGCCAATTGCATACTGCCTCTGGAGTaGCCTGGCATGTGCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: TSQHCQDTHSEMTALANCILPLE*PGMCIT Trigger: TGTTATGCACATGCCAGGTCACTCCAGAGGCAGTAT...GCAATTGGCCAATGCTGTCATTTCAGAGTGTGTGTCCTGGCAATGTTGTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR TCA 90 bp | ACTTCACAACATTGCCAGGACACACACTCTGAAATGACAGCATTGGCCAATTGCGGTCCACCAACTCTATaGGACGCTCACAAGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSQHCQDTHSEMTALANCGPPTL*DAHKFQ Trigger: TTGGAACTTGTGAGCGTCTCATAGAGTTGGTGGACC...GCAATTGGCCAATGCTGTCATTTCAGAGTGTGTGTCCTGGCAATGTTGTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR GCA 90 bp | CGGAGAGCTAAACTTGCAAGAGACCTCATGGCAAAAGTAGACACTTTGTGGCATAAATGTTGGCCCGGTTaGCTGACTCGTAGAACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRAKLARDLMAKVDTLWHKCWPG*LTRRTV Trigger: AACGGTTCTACGAGTCAGGCAACCGGGCCAACATTT...ATGCCACAAAGTGTCTACTTTTGCCATGAGGTCTCTTGCAAGTTTAGCTCTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| CDS-3UTR GCA 90 bp | CGGAGAGCTAAACTTGCAAGAGACCTCATGGCAAAAGTAGACACTTTGTGGCATCTTGAATCCAGAAGATaGCATCGCCCAGAGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRAKLARDLMAKVDTLWHLESRR*HRPETC Trigger: ACAAGTCTCTGGGCGATGGCATCTTCTGGATTCAAG...ATGCCACAAAGTGTCTACTTTTGCCATGAGGTCTCTTGCAAGTTTAGCTCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| CDS-3UTR CCA 90 bp | CATTGGCCAATTGCAAGCTTATTTAAGTGGCTTCTTCCTCGAAGAAAAGAAAAATCGCCCAGAGACTTGTaGGCATACCACTCGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HWPIASLFKWLLPRRKEKSPRDL*AYHSSA Trigger: GGCGCTCGAGTGGTATGCCCACAAGTCTCTGGGCGA...TTTTTCTTTTCTTCGAGGAAGAAGCCACTTAAATAAGCTTGCAATTGGCCAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR TCA 90 bp | TTGAACATCCTACATTGTTTAGCACAGTACTGTGTACCTATGTGTAAATGTGGCGTCTGTCGCCAAGGTTaGTCACATCCCCATCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNILHCLAQYCVPMCKCGVCRQG*SHPHPA Trigger: TGCAGGATGGGGATGTGATCAACCTTGGCGACAGAC...GCCACATTTACACATAGGTACACAGTACTGTGCTAAACAATGTAGGATGTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CCA 90 bp | TCTGAGGATGGTCAGTTACCTCCAGGATGCACATTTAAAATGGATCATGAATACGCCTCTGGAGTGACCTaGCATGTGCATAACAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEDGQLPPGCTFKMDHEYASGVT*HVHNSE Trigger: CTCACTGTTATGCACATGCCAGGTCACTCCAGAGGC...GTATTCATGATCCATTTTAAATGTGCATCCTGGAGGTAACTGACCATCCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR GCA 90 bp | TTGAACATCCTACATTGTTTAGCACAGTACTGTGTACCTATGTGTAAATGTGGCAAATGTTGGCCCGGTTaGCTGACTCGTAGAACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNILHCLAQYCVPMCKCGKCWPG*LTRRTV Trigger: AACGGTTCTACGAGTCAGGCAACCGGGCCAACATTT...GCCACATTTACACATAGGTACACAGTACTGTGCTAAACAATGTAGGATGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CCA 90 bp | TTGAACATCCTACATTGTTTAGCACAGTACTGTGTACCTATGTGTAAATGTGGCAGCAAATACTGCCTCTaGAGTGACCTGGCATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNILHCLAQYCVPMCKCGSKYCL*SDLACA Trigger: TGCACATGCCAGGTCACTCCAGAGGCAGTATTTGCT...GCCACATTTACACATAGGTACACAGTACTGTGCTAAACAATGTAGGATGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR TCA 90 bp | AGTAACTGTTTCCAACAACATGGGGGAACTGGGTTAATTTACACAGTTAATACAGAGCCAGTCAATCAGTaGTCCATCATACACGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: SNCFQQHGGTGLIYTVNTEPVNQ*SIIHDV Trigger: GACGTCGTGTATGATGGATCACTGATTGACTGGCTC...TGTATTAACTGTGTAAATTAACCCAGTTCCCCCATGTTGTTGGAAACAGTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR TCA 90 bp | CATTGGCCAATTGCAAGCTTATTTAAGTGGCTTCTTCCTCGAAGAAAAGAAAAATTCCAACATAGTCACTaGTCCTGCTGTATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HWPIASLFKWLLPRRKEKFQHSH*SCCMGA Trigger: GGCTCCCATACAGCAGGATCAGTGACTATGTTGGAA...TTTTTCTTTTCTTCGAGGAAGAAGCCACTTAAATAAGCTTGCAATTGGCCAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR GCA 90 bp | AGTAACTGTTTCCAACAACATGGGGGAACTGGGTTAATTTACACAGTTAATACACTTGAATCCAGAAGATaGCATCGCCCAGAGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNCFQQHGGTGLIYTVNTLESRR*HRPETC Trigger: ACAAGTCTCTGGGCGATGGCATCTTCTGGATTCAAG...TGTATTAACTGTGTAAATTAACCCAGTTCCCCCATGTTGTTGGAAACAGTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR GCA 90 bp | AGTAACTGTTTCCAACAACATGGGGGAACTGGGTTAATTTACACAGTTAATACACATGTAAGCAAATACTaGCTCTGGAGTGACCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNCFQQHGGTGLIYTVNTHVSKY*LWSDLA Trigger: TGCCAGGTCACTCCAGAGGCAGTATTTGCTTACATG...TGTATTAACTGTGTAAATTAACCCAGTTCCCCCATGTTGTTGGAAACAGTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGTATTTTCACAGGGTAGCAATAGTGAAATATCGCAATCTTACATTGCAAAAGTAGACACTTTGTaGCATATCCCAGCTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSVFSQGSNSEISQSYIAKVDTL*HIPAFE Trigger: TTCAAAAGCTGGGATATGCCACAAAGTGTCTACTTT...TGCAATGTAAGATTGCGATATTTCACTATTGCTACCCTGTGAAAATACAGAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| 3UTR CAA 72 bp | CAAGGAATTTGCCCTTACCCAACTTCACACCCTTCCTaGTATCCTTTACATTTAAGCATTACATTTATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGICPYPTSHPS*YPLHLSITFIN Trigger: ATTAATAAATGTAATGCTTAAATGTAAAGGATACAAGGAAGGGTGTGAAGTTGGGTAAGGGCAAATTCCTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS CCA 90 bp | GTTGCACTGCCTGCACTCGGAACTGCCTGGCCCTCCAGCCAGGGCTaGGCGCCCGCACCACCTCGCTGTCAGAAAGCCAGGTCACGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VALPALGTAWPSSQG*APAPPRCQKARSRS Trigger: AGACCGTGACCTGGCTTTCTGACAGCGAGGTGGTGCGGGCGCCCAGCCCTGGCTGGAGGGCCAGGCAGTTCCGAGTGCAGGCAGTGCAAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS GCA 90 bp | AAGGTTGATCACATCCCCATCCTGCAGAATGAGGGTGGGTTGCACTaGCTGCACTCGGAACTGCCTGGCCCTCCAGCCAGGGCTGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KVDHIPILQNEGGLH*LHSELPGPPARAGR Trigger: GCGCCCAGCCCTGGCTGGAGGGCCAGGCAGTTCCGAGTGCAGGCAGTGCAACCCACCCTCATTCTGCAGGATGGGGATGTGATCAACCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS GCA 90 bp | TCGCCAAGGTTGATCACATCCCCATCCTGCAGAATGAGGGTGGGTTaGACTGCCTGCACTCGGAACTGCCTGGCCCTCCAGCCAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPRLITSPSCRMRVG*TACTRNCLALQPGL Trigger: CAGCCCTGGCTGGAGGGCCAGGCAGTTCCGAGTGCAGGCAGTGCAACCCACCCTCATTCTGCAGGATGGGGATGTGATCAACCTTGGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGGCGTGGTCGGGAGCAGGCAAACCTGTGTGCAGTTACTAGCATTGTTTGTCACGGTCTCAAAGTaGTCCCCGCGAGCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGGVVGSRQTCVQLLALFVTVSK*SPRARA Trigger: GGCCCTGGCTCGCGGGGACAACTTTGAGACCGTGAC...AAACAATGCTAGTAACTGCACACAGGTTTGCCTGCTCCCGACCACGCCCCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CAA 90 bp | AGCACCTTCTCCACAAGGCCTCGGTCCACCAACTCTATGAGACGCTCACAAGTTCCATCGCCCAGAGACTaGTGGGCATACCACTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: STFSTRPRSTNSMRRSQVPSPRD*WAYHSS Trigger: GCTCGAGTGGTATGCCCACAAGTCTCTGGGCGATGG...AACTTGTGAGCGTCTCATAGAGTTGGTGGACCGAGGCCTTGTGGAGAAGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGGCGTGGTCGGGAGCAGGCAAACCTGTGTGCAGTTACTAGCATTGTTTCACGGAGAGCTAAACTaGCAAGAGACCTCATGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RGGVVGSRQTCVQLLALFHGELN*QETSWQ Trigger: TTGCCATGAGGTCTCTTGCAAGTTTAGCTCTCCGTG...AAACAATGCTAGTAACTGCACACAGGTTTGCCTGCTCCCGACCACGCCCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CAA 90 bp | CTCCTTTCTGAGTGTCAGCAAAGGTTTATATGGTGGCACATGACAGCTCAGTTCCCATCGCCCAGAGACTaGTGGGCATACCACTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSECQQRFIWWHMTAQFPSPRD*WAYHSS Trigger: GCTCGAGTGGTATGCCCACAAGTCTCTGGGCGATGG...GAACTGAGCTGTCATGTGCCACCATATAAACCTTTGCTGACACTCAGAAAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CAA 90 bp | GAACTGCTGGTACGGAGTGATCTGAGTTTCAAAAGTGGATCTGTTTGGTCAACATGTCTGTCGCCAAGGTaGATCACATCCCCATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ELLVRSDLSFKSGSVWSTCLSPR*ITSPSC Trigger: GCAGGATGGGGATGTGATCAACCTTGGCGACAGACA...TGTTGACCAAACAGATCCACTTTTGAAACTCAGATCACTCCGTACCAGCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CAA 90 bp | CTCCTTTCTGAGTGTCAGCAAAGGTTTATATGGTGGCACATGACAGCTCAGTTCCTCGTAGAACCGTTCTaGAATCCAGAAGATGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LLSECQQRFIWWHMTAQFLVEPF*NPEDAI Trigger: GATGGCATCTTCTGGATTCAAGAACGGTTCTACGAG...GAACTGAGCTGTCATGTGCCACCATATAAACCTTTGCTGACACTCAGAAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CAA 90 bp | CGGAGAGCTAAACTTGCAAGAGACCTCATGGCAAAAGTAGACACTTTGTGGCATCTCGTAGAACCGTTCTaGAATCCAGAAGATGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RRAKLARDLMAKVDTLWHLVEPF*NPEDAI Trigger: GATGGCATCTTCTGGATTCAAGAACGGTTCTACGAG...ATGCCACAAAGTGTCTACTTTTGCCATGAGGTCTCTTGCAAGTTTAGCTCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224299.2 |
||
| CDS-3UTR CAA 90 bp | AGTAACTGTTTCCAACAACATGGGGGAACTGGGTTAATTTACACAGTTAATACATCGGCACCAAAGGTATaGAAGTGCCCAGGAAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SNCFQQHGGTGLIYTVNTSAPKV*KCPGST Trigger: GGTGCTTCCTGGGCACTTCAATACCTTTGGTGCCGA...TGTATTAACTGTGTAAATTAACCCAGTTCCCCCATGTTGTTGGAAACAGTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS-3UTR CAA 90 bp | ACTTCTGTATTTTCACAGGGTAGCAATAGTGAAATATCGCAATCTTACATTGCAGCAAAAGTAGACACTTaGTGGCATATCCCAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSVFSQGSNSEISQSYIAAKVDT*WHIPAF Trigger: AAAAGCTGGGATATGCCACAAAGTGTCTACTTTTGC...TGCAATGTAAGATTGCGATATTTCACTATTGCTACCCTGTGAAAATACAGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||
| CDS GCA 72 bp | CACGTGGGTGGCCACGGCCAGCAGTGGCCGGCGTCCTaGATCCTCTTTAGACCCGCAATCCTGCAAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HVGGHGQQWPAS*ILFRPAILQEA Trigger: GGCCTCTTGCAGGATTGCGGGTCTAAAGAGGATGCAGGACGCCGGCCACTGCTGGCCGTGGCCACCCACGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057598.7 ENSMUST00000224299.2 |
||
| CDS CCA 72 bp | GATAGAGACCGCCGGAGTGATCGAAGTGCACGTGGGTaGCCACGGCCAGCAGTGGCCGGCGTCCTGCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: DRDRRSDRSARG*PRPAVAGVLHP Trigger: AGGATGCAGGACGCCGGCCACTGCTGGCCGTGGCCACCCACGTGCACTTCGATCACTCCGGCGGTCTCTATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057598.7 ENSMUST00000224299.2 |
||
| CDS CAA 72 bp | GGCATGTGCATAACAGTGAGCTGTCTGTCGCCAAGGTaGATCACATCCCCATCCTGCAGAATGAGGGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GMCITVSCLSPR*ITSPSCRMRVG Trigger: ACCCACCCTCATTCTGCAGGATGGGGATGTGATCAACCTTGGCGACAGACAGCTCACTGTTATGCACATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057598.7 |
||