Pregenerated sensors for MBLAC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049285Ensembl transcript IDs: ENSMUST00000057773.5
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATCATTCTGTCCTGTTTGGAAGCTGCCTCCTAGAAAGCTGCACGTaGCAAATATTGCTTGTCTTGACTGTGTCCTCTAGGTCTCCCGGA | + |
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Preference number: 1 (lower is better) Translates to: NHSVLFGSCLLESCT*QILLVLTVSSRSPG Trigger: TCCGGGAGACCTAGAGGACACAGTCAAGACAAGCAATATTTGTCACGTGCAGCTTTCTAGGAGGCAGCTTCCAAACAGGACAGAATGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| 3UTR TCA 90 bp | GAGGATGTGGATCTAAGCCAGTCCTTTGTCCTGCTTAGGTTGCAATaGTTAAAGGGGACTGATGTCAATCATTCTGTCCTGTTTGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: EDVDLSQSFVLLRLQ*LKGTDVNHSVLFGS Trigger: GCTTCCAAACAGGACAGAATGATTGACATCAGTCCCCTTTAATCATTGCAACCTAAGCAGGACAAAGGACTGGCTTAGATCCACATCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTCCGACAACCTGAACTCGATCCTGGGGACCCACAGGATGGAGAGAACCGACAAATATTGCTTGTCTTaGCTGTGTCCTCTAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: KSDNLNSILGTHRMERTDKYCLS*LCPLGL Trigger: GAGACCTAGAGGACACAGTCAAGACAAGCAATATTT...GTCGGTTCTCTCCATCCTGTGGGTCCCCAGGATCGAGTTCAGGTTGTCGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTCCGACAACCTGAACTCGATCCTGGGGACCCACAGGATGGAGAGAACCGACCTAGAAAGCTGCACGTaGCAAATATTGCTTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: KSDNLNSILGTHRMERTDLESCT*QILLVL Trigger: CAAGACAAGCAATATTTGTCACGTGCAGCTTTCTAG...GTCGGTTCTCTCCATCCTGTGGGTCCCCAGGATCGAGTTCAGGTTGTCGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| 3UTR TCA 72 bp | GCAGGTAAAGGGTCCCTGGCGTCAAGTCCGACAACCTaGACTCGATCCTGGGGACCCACAGGATGGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: AGKGSLASSPTT*TRSWGPTGWRE Trigger: TTCTCTCCATCCTGTGGGTCCCCAGGATCGAGTTCAGGTTGTCGGACTTGACGCCAGGGACCCTTTACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| 3UTR-3UTR CAA 90 bp | AAGTCCGACAACCTGAACTCGATCCTGGGGACCCACAGGATGGAGAGAACCGACCAAATATTGCTTGTCTaGACTGTGTCCTCTAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: KSDNLNSILGTHRMERTDQILLV*TVSSRS Trigger: AGACCTAGAGGACACAGTCAAGACAAGCAATATTTG...GTCGGTTCTCTCCATCCTGTGGGTCCCCAGGATCGAGTTCAGGTTGTCGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| 3UTR TCA 72 bp | GTCCTGTTTGGAAGCTGCCTCCTAGAAAGCTGCACGTaGCAAATATTGCTTGTCTTGACTGTGTCCTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: VLFGSCLLESCT*QILLVLTVSSR Trigger: CCTAGAGGACACAGTCAAGACAAGCAATATTTGTCACGTGCAGCTTTCTAGGAGGCAGCTTCCAAACAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| 3UTR TCA 72 bp | GATCTAAGCCAGTCCTTTGTCCTGCTTAGGTTGCAATaGTTAAAGGGGACTGATGTCAATCATTCTGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: DLSQSFVLLRLQ*LKGTDVNHSVL Trigger: CAGGACAGAATGATTGACATCAGTCCCCTTTAATCATTGCAACCTAAGCAGGACAAAGGACTGGCTTAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS-3UTR CCA 90 bp | GTCAAGTCCGACAACCTGAACTCGATCCTGGGGACCCACAGGATGGAGAGAACCCTCCGTGGCCCGGCGTaGCCCACACCTGCAGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VKSDNLNSILGTHRMERTLRGPA*PTPAVP Trigger: CGGGACTGCAGGTGTGGGCCACGCCGGGCCACGGAG...GGTTCTCTCCATCCTGTGGGTCCCCAGGATCGAGTTCAGGTTGTCGGACTTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS-3UTR GCA 90 bp | AAGTCCGACAACCTGAACTCGATCCTGGGGACCCACAGGATGGAGAGAACCGACCGGTGCCCAGGCTGGTaGCCTCCACTACGACGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KSDNLNSILGTHRMERTDRCPGW*PPLRRS Trigger: TGAGCGTCGTAGTGGAGGGCACCAGCCTGGGCACCG...GTCGGTTCTCTCCATCCTGTGGGTCCCCAGGATCGAGTTCAGGTTGTCGGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS-3UTR CCA 90 bp | GACTCTTCCAAAGTAGCCTTCAGAATTCCACAGGCACACACGCACATCCCAAATTCCCGCTGTCCTCCGTaGCCCGGCGTGGCCCACACC | + |
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Preference number: 4 (lower is better) Translates to: DSSKVAFRIPQAHTHIPNSRCPP*PGVAHT Trigger: GGTGTGGGCCACGCCGGGCCACGGAGGACAGCGGGA...ATTTGGGATGTGCGTGTGTGCCTGTGGAATTCTGAAGGCTACTTTGGAAGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS-3UTR GCA 90 bp | GGTCCTAACAAGAATATAAATCAGGATGGCTCAGCAGGTAAAGGGTCCCTGGCGCAGCCACCACCACGGTaGCCAGGCTGGTGCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GPNKNINQDGSAGKGSLAQPPPR*PGWCPP Trigger: TGGAGGGCACCAGCCTGGGCACCGTGGTGGTGGCTG...CGCCAGGGACCCTTTACCTGCTGAGCCATCCTGATTTATATTCTTGTTAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS-3UTR TCA 90 bp | AAGAATATAAATCAGGATGGCTCAGCAGGTAAAGGGTCCCTGGCGTCAAGTCCGTCCCGGCTCCGCTGCTaGGCTACTGGGTCTTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: KNINQDGSAGKGSLASSPSRLRC*ATGSSL Trigger: GAGCGAAGACCCAGTAGCTCAGCAGCGGAGCCGGGA...CGGACTTGACGCCAGGGACCCTTTACCTGCTGAGCCATCCTGATTTATATTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS-3UTR GCA 90 bp | GGGACTGATGTCAATCATTCTGTCCTGTTTGGAAGCTGCCTCCTAGAAAGCTGCGGCGTGGCCCACACCTaGAGTCCCGAGCCCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: GTDVNHSVLFGSCLLESCGVAHT*SPEPSI Trigger: GATACTGGGCTCGGGACTGCAGGTGTGGGCCACGCC...GCAGCTTTCTAGGAGGCAGCTTCCAAACAGGACAGAATGATTGACATCAGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS-3UTR CCA 90 bp | GACTCTTCCAAAGTAGCCTTCAGAATTCCACAGGCACACACGCACATCCCAAATCCACGGTGCCCAGGCTaGTGCCCTCCACTACGACGC | + |
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Preference number: 4 (lower is better) Translates to: DSSKVAFRIPQAHTHIPNPRCPG*CPPLRR Trigger: GCGTCGTAGTGGAGGGCACCAGCCTGGGCACCGTGG...ATTTGGGATGTGCGTGTGTGCCTGTGGAATTCTGAAGGCTACTTTGGAAGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS-3UTR CCA 90 bp | GTCAAGTCCGACAACCTGAACTCGATCCTGGGGACCCACAGGATGGAGAGAACCGGAAGGCAGAAGTCATaGGAGACTAACAAAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VKSDNLNSILGTHRMERTGRQKS*ETNKAA Trigger: GGCAGCTTTGTTAGTCTCCCATGACTTCTGCCTTCC...GGTTCTCTCCATCCTGTGGGTCCCCAGGATCGAGTTCAGGTTGTCGGACTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS-3UTR TCA 90 bp | TTAAAGGGGACTGATGTCAATCATTCTGTCCTGTTTGGAAGCTGCCTCCTAGAAACATATCAAATCCTCTaGACTTTTCACTGTTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LKGTDVNHSVLFGSCLLETYQIL*TFHCFP Trigger: AGGGAAACAGTGAAAAGTTCAGAGGATTTGATATGT...TTCTAGGAGGCAGCTTCCAAACAGGACAGAATGATTGACATCAGTCCCCTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS GCA 90 bp | GGCTGGAGTCCGAGGCCCAGCCCCGAGGCAGGACGAGAGTCACAGTaGCATCAGCACGCACCGCGTCGCCCGCTCCCTGCGGCTCCGCGT | + |
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Preference number: 5 (lower is better) Translates to: GWSPRPSPEAGRESQ*HQHAPRRPLPAAPR Trigger: ACGCGGAGCCGCAGGGAGCGGGCGACGCGGTGCGTGCTGATGGCACTGTGACTCTCGTCCTGCCTCGGGGCTGGGCCTCGGACTCCAGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS CCA 90 bp | ACGCACCGCCTCCTCCAGGGCAGTCTTAGAGCCGCCGTCTGCGGATaGGGCCAAACCGCGGCTGGAGTCCGAGGCCCAGCCCCGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: THRLLQGSLRAAVCG*GQTAAGVRGPAPRQ Trigger: CTGCCTCGGGGCTGGGCCTCGGACTCCAGCCGCGGTTTGGCCCCATCCGCAGACGGCGGCTCTAAGACTGCCCTGGAGGAGGCGGTGCGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS GCA 90 bp | GTCGCTCGAACACATCGCCAGCCACCACCACGGTGCCCAGGCTGGTaGCCTCCACTACGACGCTCACGTCCCGCTGTCCTCCGTGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: VARTHRQPPPRCPGW*PPLRRSRPAVLRGP Trigger: CGGGCCACGGAGGACAGCGGGACGTGAGCGTCGTAGTGGAGGGCACCAGCCTGGGCACCGTGGTGGTGGCTGGCGATGTGTTCGAGCGAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS GCA 90 bp | ACGCTCACGTCCCGCTGTCCTCCGTGGCCCGGCGTGGCCCACACCTaGAGTCCCGAGCCCAGTATCAAGGGCTGCGTTTCACACAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: TLTSRCPPWPGVAHT*SPEPSIKGCVSHSP Trigger: TGGGCTGTGTGAAACGCAGCCCTTGATACTGGGCTCGGGACTGCAGGTGTGGGCCACGCCGGGCCACGGAGGACAGCGGGACGTGAGCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS CCA 90 bp | CCTCCACTACGACGCTCACGTCCCGCTGTCCTCCGTGGCCCGGCGTaGCCCACACCTGCAGTCCCGAGCCCAGTATCAAGGGCTGCGTTT | + |
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Preference number: 5 (lower is better) Translates to: PPLRRSRPAVLRGPA*PTPAVPSPVSRAAF Trigger: AAACGCAGCCCTTGATACTGGGCTCGGGACTGCAGGTGTGGGCCACGCCGGGCCACGGAGGACAGCGGGACGTGAGCGTCGTAGTGGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS CCA 90 bp | CAAGTCGCTCGAACACATCGCCAGCCACCACCACGGTGCCCAGGCTaGTGCCCTCCACTACGACGCTCACGTCCCGCTGTCCTCCGTGGC | + |
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Preference number: 5 (lower is better) Translates to: QVARTHRQPPPRCPG*CPPLRRSRPAVLRG Trigger: GCCACGGAGGACAGCGGGACGTGAGCGTCGTAGTGGAGGGCACCAGCCTGGGCACCGTGGTGGTGGCTGGCGATGTGTTCGAGCGACTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS GCA 90 bp | CCTCGTCACCAAGTCGCTCGAACACATCGCCAGCCACCACCACGGTaGCCAGGCTGGTGCCCTCCACTACGACGCTCACGTCCCGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: PRHQVARTHRQPPPR*PGWCPPLRRSRPAV Trigger: GACAGCGGGACGTGAGCGTCGTAGTGGAGGGCACCAGCCTGGGCACCGTGGTGGTGGCTGGCGATGTGTTCGAGCGACTTGGTGACGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS CCA 90 bp | ATCAGCTACGCTCAGAATCCTCTCCCGGCTCCGCTGCTGAGCTACTaGGTCTTCGCTCAGGGCCTGCCAGGAGTCCTCGTCACCAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: ISYAQNPLPAPLLSY*VFAQGLPGVLVTKS Trigger: CGACTTGGTGACGAGGACTCCTGGCAGGCCCTGAGCGAAGACCCAGTAGCTCAGCAGCGGAGCCGGGAGAGGATTCTGAGCGTAGCTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS TCA 90 bp | TCTGAACTTTTCACTGTTTCCCTGACCACTCGAAAGGGGGCTCCGTaGCCAGGCACCACCACATCAGCTACGCTCAGAATCCTCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: SELFTVSLTTRKGAP*PGTTTSATLRILSR Trigger: CCGGGAGAGGATTCTGAGCGTAGCTGATGTGGTGGTGCCTGGTCACGGAGCCCCCTTTCGAGTGGTCAGGGAAACAGTGAAAAGTTCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS GCA 72 bp | CACCGCCTCCTCCAGGGCAGTCTTAGAGCCGCCGTCTaGGGATGGGGCCAAACCGCGGCTGGAGTCCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: HRLLQGSLRAAV*GWGQTAAGVRG Trigger: GCCTCGGACTCCAGCCGCGGTTTGGCCCCATCCGCAGACGGCGGCTCTAAGACTGCCCTGGAGGAGGCGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS CCA 72 bp | CGACGCTCACGTCCCGCTGTCCTCCGTGGCCCGGCGTaGCCCACACCTGCAGTCCCGAGCCCAGTATCAAGG | + |
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Preference number: 6 (lower is better) Translates to: RRSRPAVLRGPA*PTPAVPSPVSR Trigger: CCTTGATACTGGGCTCGGGACTGCAGGTGTGGGCCACGCCGGGCCACGGAGGACAGCGGGACGTGAGCGTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS GCA 72 bp | TCCCGCTGTCCTCCGTGGCCCGGCGTGGCCCACACCTaGAGTCCCGAGCCCAGTATCAAGGGCTGCGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SRCPPWPGVAHT*SPEPSIKGCVS Trigger: TGAAACGCAGCCCTTGATACTGGGCTCGGGACTGCAGGTGTGGGCCACGCCGGGCCACGGAGGACAGCGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS CCA 72 bp | CGAACACATCGCCAGCCACCACCACGGTGCCCAGGCTaGTGCCCTCCACTACGACGCTCACGTCCCGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RTHRQPPPRCPG*CPPLRRSRPAV Trigger: GACAGCGGGACGTGAGCGTCGTAGTGGAGGGCACCAGCCTGGGCACCGTGGTGGTGGCTGGCGATGTGTTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS GCA 72 bp | CAAGTCGCTCGAACACATCGCCAGCCACCACCACGGTaGCCAGGCTGGTGCCCTCCACTACGACGCTCACGT | + |
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Preference number: 6 (lower is better) Translates to: QVARTHRQPPPR*PGWCPPLRRSR Trigger: ACGTGAGCGTCGTAGTGGAGGGCACCAGCCTGGGCACCGTGGTGGTGGCTGGCGATGTGTTCGAGCGACTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS GCA 72 bp | GCCCCAGGTTCCCAATATGATCCGAGTGTCCGTGGGTaGCCACCACCAGAGTCACATCTTCGGGGGCCACGC | + |
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Preference number: 6 (lower is better) Translates to: APGSQYDPSVRG*PPPESHLRGPR Trigger: GCGTGGCCCCCGAAGATGTGACTCTGGTGGTGGGCACCCACGGACACTCGGATCATATTGGGAACCTGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS TCA 72 bp | TTCACTGTTTCCCTGACCACTCGAAAGGGGGCTCCGTaGCCAGGCACCACCACATCAGCTACGCTCAGAATC | + |
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Preference number: 6 (lower is better) Translates to: FTVSLTTRKGAP*PGTTTSATLRI Trigger: GATTCTGAGCGTAGCTGATGTGGTGGTGCCTGGTCACGGAGCCCCCTTTCGAGTGGTCAGGGAAACAGTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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| CDS TCA 72 bp | TCAAGCAACCGCCTTGCCTTCACATATCAAATCCTCTaGACTTTTCACTGTTTCCCTGACCACTCGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SSNRLAFTYQIL*TFHCFPDHSKG Trigger: CCCTTTCGAGTGGTCAGGGAAACAGTGAAAAGTTCAGAGGATTTGATATGTGAAGGCAAGGCGGTTGCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057773.5 |
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