Pregenerated sensors for MBL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037780Ensembl transcript IDs: ENSMUST00000047095.4, ENSMUST00000225792.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGCTGAGATCAGCTACCACTCGGGCACAGGTATGGCCAGCCTTTaGTCCTTTGGTGAAAAGGCGGGGTGGCTGGCTATTTATTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: MAEISYHSGTGMASL*SFGEKAGWLAIYCR Trigger: CCTACAATAAATAGCCAGCCACCCCGCCTTTTCACCAAAGGATCAAAGGCTGGCCATACCTGTGCCCGAGTGGTAGCTGATCTCAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR GCA 90 bp | CTTGGCAGGGAGTTCTTAGGACTGAGTGTGTTTACTCACAAAGGTTaGTGTCCTTCTTTACAGTCAGGTAGACAGAGGGCTCCTGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LGREFLGLSVFTHKG*CPSLQSGRQRAPGA Trigger: TGCCCCAGGAGCCCTCTGTCTACCTGACTGTAAAGAAGGACAGCAACCTTTGTGAGTAAACACACTCAGTCCTAAGAACTCCCTGCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR GCA 90 bp | ATTCCTTGCTGTATTCCTAGCAAAACGGGTGTGACCTTTGCTCTGTaGTCAACCAGACCCTGGTGCCTCATGGTCAGCTTCCATTCATGT | + |
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Preference number: 1 (lower is better) Translates to: IPCCIPSKTGVTFAL*STRPWCLMVSFHSC Trigger: ACATGAATGGAAGCTGACCATGAGGCACCAGGGTCTGGTTGAGCACAGAGCAAAGGTCACACCCGTTTTGCTAGGAATACAGCAAGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR GCA 90 bp | CGGGGTGGCTGGCTATTTATTGTAGGTTCTCTATTGACGATTCCTTaGTGTATTCCTAGCAAAACGGGTGTGACCTTTGCTCTGTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: RGGWLFIVGSLLTIP*CIPSKTGVTFALCS Trigger: TGAGCACAGAGCAAAGGTCACACCCGTTTTGCTAGGAATACAGCAAGGAATCGTCAATAGAGAACCTACAATAAATAGCCAGCCACCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR GCA 90 bp | CCAGACTTTTTGCCCATTGAGAAGGCATGCAACTTGTTGGTTAGCTaGAGTTTTGATTTCAGGATCCTTATCTCTGCCTCCATATTTGCC | + |
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Preference number: 1 (lower is better) Translates to: PDFLPIEKACNLLVS*SFDFRILISASIFA Trigger: GGCAAATATGGAGGCAGAGATAAGGATCCTGAAATCAAAACTGCAGCTAACCAACAAGTTGCATGCCTTCTCAATGGGCAAAAAGTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTACCACTCGGGCACAGGTATGGCCAGCCTTTGATCCTTTGGTGAAAAGGTCAACCAGACCCTGGTaGCTCATGGTCAGCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: SATTRAQVWPAFDPLVKRSTRPW*LMVSFH Trigger: ATGGAAGCTGACCATGAGGCACCAGGGTCTGGTTGA...CCTTTTCACCAAAGGATCAAAGGCTGGCCATACCTGTGCCCGAGTGGTAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGGGAGTTCTTAGGACTGAGTGTGTTTACTCACAAAGGTTGCTGTCCTTCGGTATGGCCAGCCTTTaGTCCTTTGGTGAAAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: WQGVLRTECVYSQRLLSFGMASL*SFGEKA Trigger: CGCCTTTTCACCAAAGGATCAAAGGCTGGCCATACC...GAAGGACAGCAACCTTTGTGAGTAAACACACTCAGTCCTAAGAACTCCCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACACCGTTCCTTGGCAGGGAGTTCTTAGGACTGAGTGTGTTTACTCACAAAGGTGAAAAGGCGGGGTaGCTGGCTATTTATTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: GTPFLGREFLGLSVFTHKGEKAG*LAIYCR Trigger: CCTACAATAAATAGCCAGCCACCCCGCCTTTTCACC...TTTGTGAGTAAACACACTCAGTCCTAAGAACTCCCTGCCAAGGAACGGTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR CAA 90 bp | GGGATAGCCACAGTGCCTTGGAGCTCTGTGCACAGAGACTTCACTTaGGAAAAGGGCATCTTCTCATGGTTGGTCACAAACAACTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: GIATVPWSSVHRDFT*EKGIFSWLVTNNFF Trigger: GAAGAAGTTGTTTGTGACCAACCATGAGAAGATGCCCTTTTCCAAAGTGAAGTCTCTGTGCACAGAGCTCCAAGGCACTGTGGCTATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR-3UTR TCA 90 bp | GTGACAATTCACGGAGAAAGGAAATTGGATGCTTTTATGGCTGAGATCAGCTACCCTTTGATCCTTTGGTaGAAAGGCGGGGTGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: VTIHGERKLDAFMAEISYPLILW*KGGVAG Trigger: GCCAGCCACCCCGCCTTTTCACCAAAGGATCAAAGG...GTAGCTGATCTCAGCCATAAAAGCATCCAATTTCCTTTCTCCGTGAATTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGATCTAGATAGCCTATGCCTGGGGTATAGTAAGTATCCAGAAGTGTTAGCTGTGACCTTTGCTCTGTaGTCAACCAGACCCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: EDLDSLCLGYSKYPEVLAVTFAL*STRPWC Trigger: GCACCAGGGTCTGGTTGAGCACAGAGCAAAGGTCAC...AGCTAACACTTCTGGATACTTACTATACCCCAGGCATAGGCTATCTAGATCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR-3UTR GCA 90 bp | TTCACGGAGAAAGGAAATTGGATGCTTTTATGGCTGAGATCAGCTACCACTCGGAACGGGTGTGACCTTTaGTCTGTGCTCAACCAGACC | + |
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Preference number: 2 (lower is better) Translates to: FTEKGNWMLLWLRSATTRNGCDL*SVLNQT Trigger: GGTCTGGTTGAGCACAGAGCAAAGGTCACACCCGTT...CCGAGTGGTAGCTGATCTCAGCCATAAAAGCATCCAATTTCCTTTCTCCGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR-3UTR GCA 90 bp | GAAACAAGTACTGAATTTTCTTTGGAAGCAAGTGAGAGTCCAGAGAGGAGGCAAGTCACGTACATGAACTaGCCTTCAGTCGCCTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: ETSTEFSLEASESPERRQVTYMN*PSVASS Trigger: GGACGAGGCGACTGAAGGGCAGTTCATGTACGTGAC...TTGCCTCCTCTCTGGACTCTCACTTGCTTCCAAAGAAAATTCAGTACTTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGTACTGAATTTTCTTTGGAAGCAAGTGAGAGTCCAGAGAGGAGGCAAGATAGCCACAGTGCCTTaGAGCTCTGTGCACAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: KQVLNFLWKQVRVQRGGKIATVP*SSVHRD Trigger: GTCTCTGTGCACAGAGCTCCAAGGCACTGTGGCTAT...CTTGCCTCCTCTCTGGACTCTCACTTGCTTCCAAAGAAAATTCAGTACTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGGGAGTTCTTAGGACTGAGTGTGTTTACTCACAAAGGTTGCTGTCCTTCCCATTCATGTCCTCATaGCACAACCAAATATATCCT | + |
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Preference number: 2 (lower is better) Translates to: WQGVLRTECVYSQRLLSFPFMSS*HNQIYP Trigger: AGGATATATTTGGTTGTGGCATGAGGACATGAATGG...GAAGGACAGCAACCTTTGTGAGTAAACACACTCAGTCCTAAGAACTCCCTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR-3UTR GCA 90 bp | GAAACAAGTACTGAATTTTCTTTGGAAGCAAGTGAGAGTCCAGAGAGGAGGCAATCTTCCCAGACTTTTTaGCCATTGAGAAGGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: ETSTEFSLEASESPERRQSSQTF*PLRRHA Trigger: TGCATGCCTTCTCAATGGGCAAAAAGTCTGGGAAGA...TTGCCTCCTCTCTGGACTCTCACTTGCTTCCAAAGAAAATTCAGTACTTGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR-3UTR GCA 90 bp | AAACCATTATCTAATATAATGACACAGTCTTCCCCAGAGCCATGGTTATTTGGCCAGGATCCTTATCTCTaGCTCCATATTTGCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: KPLSNIMTQSSPEPWLFGQDPYL*LHICQL Trigger: AAGCTGGCAAATATGGAGGCAGAGATAAGGATCCTG...GCCAAATAACCATGGCTCTGGGGAAGACTGTGTCATTATATTAGATAATGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGTACTGAATTTTCTTTGGAAGCAAGTGAGAGTCCAGAGAGGAGGCAAGACAGAGACTTCACTTTaGAAAAGGGCATCTTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: KQVLNFLWKQVRVQRGGKTETSL*KRASSH Trigger: ATGAGAAGATGCCCTTTTCCAAAGTGAAGTCTCTGT...CTTGCCTCCTCTCTGGACTCTCACTTGCTTCCAAAGAAAATTCAGTACTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR-3UTR GCA 90 bp | AAACAAGTACTGAATTTTCTTTGGAAGCAAGTGAGAGTCCAGAGAGGAGGCAAGAACTTGTTGGTTAGCTaGAGTTTTGATTTCAGGATC | + |
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Preference number: 2 (lower is better) Translates to: KQVLNFLWKQVRVQRGGKNLLVS*SFDFRI Trigger: GATCCTGAAATCAAAACTGCAGCTAACCAACAAGTT...CTTGCCTCCTCTCTGGACTCTCACTTGCTTCCAAAGAAAATTCAGTACTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR-3UTR CCA 90 bp | AAACCATTATCTAATATAATGACACAGTCTTCCCCAGAGCCATGGTTATTTGGCGCATCTTCTCATGGTTaGTCACAAACAACTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KPLSNIMTQSSPEPWLFGASSHG*SQTTSS Trigger: GGAAGAAGTTGTTTGTGACCAACCATGAGAAGATGC...GCCAAATAACCATGGCTCTGGGGAAGACTGTGTCATTATATTAGATAATGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR TCA 72 bp | ATCAGCTACCACTCGGGCACAGGTATGGCCAGCCTTTaGTCCTTTGGTGAAAAGGCGGGGTGGCTGGCTATT | + |
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Preference number: 3 (lower is better) Translates to: ISYHSGTGMASL*SFGEKAGWLAI Trigger: AATAGCCAGCCACCCCGCCTTTTCACCAAAGGATCAAAGGCTGGCCATACCTGTGCCCGAGTGGTAGCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR CCA 72 bp | GGCAAGGAGAATATGGAGGCACTCGTTTCCTCAGGCTaGGAACTCGCAGACAGCCTTGAAGGAAGCTTGACA | + |
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Preference number: 3 (lower is better) Translates to: GKENMEALVSSG*ELADSLEGSLT Trigger: TGTCAAGCTTCCTTCAAGGCTGTCTGCGAGTTCCCAGCCTGAGGAAACGAGTGCCTCCATATTCTCCTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR CCA 72 bp | CCTTTGCTCTGTGCTCAACCAGACCCTGGTGCCTCATaGTCAGCTTCCATTCATGTCCTCATGCCACAACCA | + |
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Preference number: 3 (lower is better) Translates to: PLLCAQPDPGAS*SASIHVLMPQP Trigger: TGGTTGTGGCATGAGGACATGAATGGAAGCTGACCATGAGGCACCAGGGTCTGGTTGAGCACAGAGCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR CCA 72 bp | TTATGGCTGAGATCAGCTACCACTCGGGCACAGGTATaGCCAGCCTTTGATCCTTTGGTGAAAAGGCGGGGT | + |
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Preference number: 3 (lower is better) Translates to: LWLRSATTRAQV*PAFDPLVKRRG Trigger: ACCCCGCCTTTTCACCAAAGGATCAAAGGCTGGCCATACCTGTGCCCGAGTGGTAGCTGATCTCAGCCATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR GCA 72 bp | TGTATTCCTAGCAAAACGGGTGTGACCTTTGCTCTGTaGTCAACCAGACCCTGGTGCCTCATGGTCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: CIPSKTGVTFAL*STRPWCLMVSF Trigger: GAAGCTGACCATGAGGCACCAGGGTCTGGTTGAGCACAGAGCAAAGGTCACACCCGTTTTGCTAGGAATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR TCA 72 bp | GTGATGCCTAGGAAGGCAATGCCTGTGGCCACTTCTTaGATGGCCTTGTTCTCTTCAGCATTCCTGGGGATA | + |
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Preference number: 3 (lower is better) Translates to: VMPRKAMPVATS*MALFSSAFLGI Trigger: TATCCCCAGGAATGCTGAAGAGAACAAGGCCATTCAAGAAGTGGCCACAGGCATTGCCTTCCTAGGCATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR TCA 72 bp | AATTCACGGAGAAAGGAAATTGGATGCTTTTATGGCTaGGATCAGCTACCACTCGGGCACAGGTATGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: NSRRKEIGCFYG*DQLPLGHRYGQ Trigger: CTGGCCATACCTGTGCCCGAGTGGTAGCTGATCTCAGCCATAAAAGCATCCAATTTCCTTTCTCCGTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR CCA 72 bp | CAGTGCCTTGGAGCTCTGTGCACAGAGACTTCACTTTaGAAAAGGGCATCTTCTCATGGTTGGTCACAAACA | + |
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Preference number: 3 (lower is better) Translates to: QCLGALCTETSL*KRASSHGWSQT Trigger: TGTTTGTGACCAACCATGAGAAGATGCCCTTTTCCAAAGTGAAGTCTCTGTGCACAGAGCTCCAAGGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR-3UTR CAA 90 bp | GAAACAAGTACTGAATTTTCTTTGGAAGCAAGTGAGAGTCCAGAGAGGAGGCAAGCCTGTGGCCACTTCTaGAATGGCCTTGTTCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: ETSTEFSLEASESPERRQACGHF*NGLVLF Trigger: GAAGAGAACAAGGCCATTCAAGAAGTGGCCACAGGC...TTGCCTCCTCTCTGGACTCTCACTTGCTTCCAAAGAAAATTCAGTACTTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR GCA 72 bp | CTGGTGCCTCATGGTCAGCTTCCATTCATGTCCTCATaGCACAACCAAATATATCCTCTCCCCTCAAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: LVPHGQLPFMSS*HNQIYPLPSKE Trigger: TTCTTTTGAGGGGAGAGGATATATTTGGTTGTGGCATGAGGACATGAATGGAAGCTGACCATGAGGCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR CCA 72 bp | CCAGCCTTTGATCCTTTGGTGAAAAGGCGGGGTGGCTaGCTATTTATTGTAGGTTCTCTATTGACGATTCCT | + |
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Preference number: 3 (lower is better) Translates to: PAFDPLVKRRGG*LFIVGSLLTIP Trigger: AGGAATCGTCAATAGAGAACCTACAATAAATAGCCAGCCACCCCGCCTTTTCACCAAAGGATCAAAGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGATACATGTAAAGAAACACACAATAGGCAAGAACGCCGTATAAACAGAGGACCAGCCTTTGATCCTTaGGTGAAAAGGCGGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: IDTCKETHNRQERRINRGPAFDP*VKRRGG Trigger: GCCACCCCGCCTTTTCACCAAAGGATCAAAGGCTGG...TCCTCTGTTTATACGGCGTTCTTGCCTATTGTGTGTTTCTTTACATGTATCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR TCA 72 bp | CAGGCTGGGAACTCGCAGACAGCCTTGAAGGAAGCTTaGCAGGAAATGTCATTCCACAAACCATTATCTAAT | + |
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Preference number: 3 (lower is better) Translates to: QAGNSQTALKEA*QEMSFHKPLSN Trigger: ATTAGATAATGGTTTGTGGAATGACATTTCCTGTCAAGCTTCCTTCAAGGCTGTCTGCGAGTTCCCAGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR GCA 72 bp | TTGCCCATTGAGAAGGCATGCAACTTGTTGGTTAGCTaGAGTTTTGATTTCAGGATCCTTATCTCTGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LPIEKACNLLVS*SFDFRILISAS Trigger: GGAGGCAGAGATAAGGATCCTGAAATCAAAACTGCAGCTAACCAACAAGTTGCATGCCTTCTCAATGGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR GCA 72 bp | CAACAGCTCAGTCACAGAGAGGATCTAGATAGCCTATaGCTGGGGTATAGTAAGTATCCAGAAGTGTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: QQLSHREDLDSL*LGYSKYPEVLA Trigger: AGCTAACACTTCTGGATACTTACTATACCCCAGGCATAGGCTATCTAGATCCTCTCTGTGACTGAGCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGGGAGTTCTTAGGACTGAGTGTGTTTACTCACAAAGGTTGCTGTCCTTCAGTACTGAATTTTCTTaGGAAGCAAGTGAGAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: WQGVLRTECVYSQRLLSFSTEFS*EASESP Trigger: TGGACTCTCACTTGCTTCCAAAGAAAATTCAGTACT...GAAGGACAGCAACCTTTGTGAGTAAACACACTCAGTCCTAAGAACTCCCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR-3UTR CAA 90 bp | AAACAAGTACTGAATTTTCTTTGGAAGCAAGTGAGAGTCCAGAGAGGAGGCAAGGAGAAGGCATGCAACTaGTTGGTTAGCTGCAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: KQVLNFLWKQVRVQRGGKEKACN*LVSCSF Trigger: AAAACTGCAGCTAACCAACAAGTTGCATGCCTTCTC...CTTGCCTCCTCTCTGGACTCTCACTTGCTTCCAAAGAAAATTCAGTACTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR GCA 72 bp | TGGCTATTTATTGTAGGTTCTCTATTGACGATTCCTTaGTGTATTCCTAGCAAAACGGGTGTGACCTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: WLFIVGSLLTIP*CIPSKTGVTFA Trigger: AGCAAAGGTCACACCCGTTTTGCTAGGAATACAGCAAGGAATCGTCAATAGAGAACCTACAATAAATAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR CCA 72 bp | CAGACTTTTTGCCCATTGAGAAGGCATGCAACTTGTTaGTTAGCTGCAGTTTTGATTTCAGGATCCTTATCT | + |
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Preference number: 3 (lower is better) Translates to: QTFCPLRRHATC*LAAVLISGSLS Trigger: AGATAAGGATCCTGAAATCAAAACTGCAGCTAACCAACAAGTTGCATGCCTTCTCAATGGGCAAAAAGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| CDS-3UTR CCA 90 bp | TCAGCTACCACTCGGGCACAGGTATGGCCAGCCTTTGATCCTTTGGTGAAAAGGCCTGAGCCCTTGACCTaGTTCTCCCTTCTCCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: SATTRAQVWPAFDPLVKRPEPLT*FSLLPF Trigger: AAAGGGGAGAAGGGAGAACCAGGTCAAGGGCTCAGG...CCTTTTCACCAAAGGATCAAAGGCTGGCCATACCTGTGCCCGAGTGGTAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR TCA 90 bp | CACAAAGGTTGCTGTCCTTCTTTACAGTCAGGTAGACAGAGGGCTCCTGGGGCACCTGTGGCCACTTCTTaGATGGCCTTGTTCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: HKGCCPSLQSGRQRAPGAPVATS*MALFSS Trigger: TGAAGAGAACAAGGCCATTCAAGAAGTGGCCACAGG...TGCCCCAGGAGCCCTCTGTCTACCTGACTGTAAAGAAGGACAGCAACCTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR GCA 90 bp | GGGACACCGTTCCTTGGCAGGGAGTTCTTAGGACTGAGTGTGTTTACTCACAAAGTCACGTACATGAACTaGCCTTCAGTCGCCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: GTPFLGREFLGLSVFTHKVTYMN*PSVASS Trigger: GGACGAGGCGACTGAAGGGCAGTTCATGTACGTGAC...TTTGTGAGTAAACACACTCAGTCCTAAGAACTCCCTGCCAAGGAACGGTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CCA 90 bp | GGGACACCGTTCCTTGGCAGGGAGTTCTTAGGACTGAGTGTGTTTACTCACAAAGCTTCCAACACTTCCTaGAGGCCCCAATTTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GTPFLGREFLGLSVFTHKASNTS*RPQFPW Trigger: CCAGGGAAATTGGGGCCTCCAGGAAGTGTTGGAAGC...TTTGTGAGTAAACACACTCAGTCCTAAGAACTCCCTGCCAAGGAACGGTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR GCA 90 bp | TCAGCTACCACTCGGGCACAGGTATGGCCAGCCTTTGATCCTTTGGTGAAAAGGCAGGATCCTTATCTCTaGCTCCATATTTGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SATTRAQVWPAFDPLVKRQDPYL*LHICQL Trigger: AAGCTGGCAAATATGGAGGCAGAGATAAGGATCCTG...CCTTTTCACCAAAGGATCAAAGGCTGGCCATACCTGTGCCCGAGTGGTAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGGTTGCTGTCCTTCTTTACAGTCAGGTAGACAGAGGGCTCCTGGGGCATCCCATTGAGAAGGCATaGAACTTGTTGGTTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TKVAVLLYSQVDRGLLGHPIEKA*NLLVSC Trigger: GCAGCTAACCAACAAGTTGCATGCCTTCTCAATGGG...ATGCCCCAGGAGCCCTCTGTCTACCTGACTGTAAAGAAGGACAGCAACCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR TCA 90 bp | TGCAACTTGTTGGTTAGCTGCAGTTTTGATTTCAGGATCCTTATCTCTGCCTCCAAGCCCCTGAGCCCTTaGCTCTATACCTGGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: CNLLVSCSFDFRILISASKPLSP*LYTWFS Trigger: GGAGAACCAGGTATAGAGTCAAGGGCTCAGGGGCTT...GGAGGCAGAGATAAGGATCCTGAAATCAAAACTGCAGCTAACCAACAAGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| CDS-3UTR GCA 90 bp | ACAAAGGTTGCTGTCCTTCTTTACAGTCAGGTAGACAGAGGGCTCCTGGGGCATTCTTCCCAGACTTTTTaGCCATTGAGAAGGCATGCA | + |
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Preference number: 4 (lower is better) Translates to: TKVAVLLYSQVDRGLLGHSSQTF*PLRRHA Trigger: TGCATGCCTTCTCAATGGGCAAAAAGTCTGGGAAGA...ATGCCCCAGGAGCCCTCTGTCTACCTGACTGTAAAGAAGGACAGCAACCTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CCA 90 bp | AGGCATGCAACTTGTTGGTTAGCTGCAGTTTTGATTTCAGGATCCTTATCTCTGGCTTCCAACACTTCCTaGAGGCCCCAATTTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RHATCWLAAVLISGSLSLASNTS*RPQFPW Trigger: CCAGGGAAATTGGGGCCTCCAGGAAGTGTTGGAAGC...CAGAGATAAGGATCCTGAAATCAAAACTGCAGCTAACCAACAAGTTGCATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| CDS-3UTR CCA 90 bp | GGGACACCGTTCCTTGGCAGGGAGTTCTTAGGACTGAGTGTGTTTACTCACAAAGCATCTTCTCATGGTTaGTCACAAACAACTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GTPFLGREFLGLSVFTHKASSHG*SQTTSS Trigger: GGAAGAAGTTGTTTGTGACCAACCATGAGAAGATGC...TTTGTGAGTAAACACACTCAGTCCTAAGAACTCCCTGCCAAGGAACGGTGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR CAA 72 bp | AGGCGGGGTGGCTGGCTATTTATTGTAGGTTCTCTATaGACGATTCCTTGCTGTATTCCTAGCAAAACGGGT | + |
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Preference number: 4 (lower is better) Translates to: RRGGWLFIVGSL*TIPCCIPSKTG Trigger: ACCCGTTTTGCTAGGAATACAGCAAGGAATCGTCAATAGAGAACCTACAATAAATAGCCAGCCACCCCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR TCA 90 bp | TGGCAGGGAGTTCTTAGGACTGAGTGTGTTTACTCACAAAGGTTGCTGTCCTTCAGACTTTTTGCCCATTaGGAAGGCATGCAACTTGTT | + |
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Preference number: 4 (lower is better) Translates to: WQGVLRTECVYSQRLLSFRLFAH*EGMQLV Trigger: AACAAGTTGCATGCCTTCTCAATGGGCAAAAAGTCT...GAAGGACAGCAACCTTTGTGAGTAAACACACTCAGTCCTAAGAACTCCCTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CCA 90 bp | TCTCCACCAAACATAGATACATGTAAAGAAACACACAATAGGCAAGAACGCCGTATAGCCACAGTGCCTTaGAGCTCTGTGCACAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: SPPNIDTCKETHNRQERRIATVP*SSVHRD Trigger: GTCTCTGTGCACAGAGCTCCAAGGCACTGTGGCTAT...ACGGCGTTCTTGCCTATTGTGTGTTTCTTTACATGTATCTATGTTTGGTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR TCA 90 bp | GTGACAATTCACGGAGAAAGGAAATTGGATGCTTTTATGGCTGAGATCAGCTACGCCTTGAAGGAAGCTTaGCAGGAAATGTCATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VTIHGERKLDAFMAEISYALKEA*QEMSFH Trigger: GTGGAATGACATTTCCTGTCAAGCTTCCTTCAAGGC...GTAGCTGATCTCAGCCATAAAAGCATCCAATTTCCTTTCTCCGTGAATTGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CCA 90 bp | GTGACAATTCACGGAGAAAGGAAATTGGATGCTTTTATGGCTGAGATCAGCTACCCAGCTTCTCCTCAATaGCTCTATTGTCTCCATGGT | + |
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Preference number: 4 (lower is better) Translates to: VTIHGERKLDAFMAEISYPASPQ*LYCLHG Trigger: ACCATGGAGACAATAGAGCCATTGAGGAGAAGCTGG...GTAGCTGATCTCAGCCATAAAAGCATCCAATTTCCTTTCTCCGTGAATTGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR CAA 72 bp | TGGTACCTCTTAGTGACAATTCACGGAGAAAGGAAATaGGATGCTTTTATGGCTGAGATCAGCTACCACTCG | + |
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Preference number: 4 (lower is better) Translates to: WYLLVTIHGERK*DAFMAEISYHS Trigger: CGAGTGGTAGCTGATCTCAGCCATAAAAGCATCCAATTTCCTTTCTCCGTGAATTGTCACTAAGAGGTACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CCA 90 bp | GAGGATCTAGATAGCCTATGCCTGGGGTATAGTAAGTATCCAGAAGTGTTAGCTAAGGGCATCTTCTCATaGTTGGTCACAAACAACTTC | + |
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Preference number: 4 (lower is better) Translates to: EDLDSLCLGYSKYPEVLAKGIFS*LVTNNF Trigger: GAAGTTGTTTGTGACCAACCATGAGAAGATGCCCTT...AGCTAACACTTCTGGATACTTACTATACCCCAGGCATAGGCTATCTAGATCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CCA 90 bp | TTCACGGAGAAAGGAAATTGGATGCTTTTATGGCTGAGATCAGCTACCACTCGGAGAGCCATGGTTATTTaGCTCATCCTTTTTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: FTEKGNWMLLWLRSATTRRAMVI*LILFPV Trigger: AACTGGAAAAAGGATGAGCCAAATAACCATGGCTCT...CCGAGTGGTAGCTGATCTCAGCCATAAAAGCATCCAATTTCCTTTCTCCGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| 3UTR CAA 72 bp | CCAGACTTTTTGCCCATTGAGAAGGCATGCAACTTGTaGGTTAGCTGCAGTTTTGATTTCAGGATCCTTATC | + |
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Preference number: 4 (lower is better) Translates to: PDFLPIEKACNL*VSCSFDFRILI Trigger: GATAAGGATCCTGAAATCAAAACTGCAGCTAACCAACAAGTTGCATGCCTTCTCAATGGGCAAAAAGTCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| 3UTR CAA 72 bp | TTGAGAAGGCATGCAACTTGTTGGTTAGCTGCAGTTTaGATTTCAGGATCCTTATCTCTGCCTCCATATTTG | + |
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Preference number: 4 (lower is better) Translates to: LRRHATCWLAAV*ISGSLSLPPYL Trigger: CAAATATGGAGGCAGAGATAAGGATCCTGAAATCAAAACTGCAGCTAACCAACAAGTTGCATGCCTTCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| CDS-3UTR GCA 90 bp | CAGCTTCCATTCATGTCCTCATGCCACAACCAAATATATCCTCTCCCCTCAAAAAACTTGTTGGTTAGCTaGAGTTTTGATTTCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: QLPFMSSCHNQIYPLPSKNLLVS*SFDFRI Trigger: GATCCTGAAATCAAAACTGCAGCTAACCAACAAGTT...TTTTGAGGGGAGAGGATATATTTGGTTGTGGCATGAGGACATGAATGGAAGCTG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CCA 90 bp | GTGACAATTCACGGAGAAAGGAAATTGGATGCTTTTATGGCTGAGATCAGCTACACAGAGACTTCACTTTaGAAAAGGGCATCTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VTIHGERKLDAFMAEISYTETSL*KRASSH Trigger: ATGAGAAGATGCCCTTTTCCAAAGTGAAGTCTCTGT...GTAGCTGATCTCAGCCATAAAAGCATCCAATTTCCTTTCTCCGTGAATTGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CAA 90 bp | CAGGTATGGCCAGCCTTTGATCCTTTGGTGAAAAGGCGGGGTGGCTGGCTATTTCAAGCCCCTGAGCCCTaGACCTGGTTCTCCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QVWPAFDPLVKRRGGWLFQAPEP*TWFSLL Trigger: GAGAAGGGAGAACCAGGTCAAGGGCTCAGGGGCTTG...AAATAGCCAGCCACCCCGCCTTTTCACCAAAGGATCAAAGGCTGGCCATACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CAA 90 bp | CACAAAGGTTGCTGTCCTTCTTTACAGTCAGGTAGACAGAGGGCTCCTGGGGCATCTCCCTTCTCCCCTTaGGGTCCATCTCTCCCATCT | + |
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Preference number: 5 (lower is better) Translates to: HKGCCPSLQSGRQRAPGASPFSP*GPSLPS Trigger: AGATGGGAGAGATGGACCCAAAGGGGAGAAGGGAGA...TGCCCCAGGAGCCCTCTGTCTACCTGACTGTAAAGAAGGACAGCAACCTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CAA 90 bp | CACAAAGGTTGCTGTCCTTCTTTACAGTCAGGTAGACAGAGGGCTCCTGGGGCACACAGAGACTTCACTTaGGAAAAGGGCATCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HKGCCPSLQSGRQRAPGAHRDFT*EKGIFS Trigger: TGAGAAGATGCCCTTTTCCAAAGTGAAGTCTCTGTG...TGCCCCAGGAGCCCTCTGTCTACCTGACTGTAAAGAAGGACAGCAACCTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CAA 90 bp | TGCAACTTGTTGGTTAGCTGCAGTTTTGATTTCAGGATCCTTATCTCTGCCTCCTCCATGGTCCCCCTTTaGGCCTTTTGGTCCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: CNLLVSCSFDFRILISASSMVPL*AFWSWT Trigger: AGTCCAGGACCAAAAGGCCAAAAGGGGGACCATGGA...GGAGGCAGAGATAAGGATCCTGAAATCAAAACTGCAGCTAACCAACAAGTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047095.4 |
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| CDS-3UTR CAA 90 bp | AAACAAGTACTGAATTTTCTTTGGAAGCAAGTGAGAGTCCAGAGAGGAGGCAAGTCTCCCTTCTCCCCTTaGGGTCCATCTCTCCCATCT | + |
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Preference number: 5 (lower is better) Translates to: KQVLNFLWKQVRVQRGGKSPFSP*GPSLPS Trigger: AGATGGGAGAGATGGACCCAAAGGGGAGAAGGGAGA...CTTGCCTCCTCTCTGGACTCTCACTTGCTTCCAAAGAAAATTCAGTACTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047095.4 ENSMUST00000225792.2 |
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| CDS-3UTR CAA 90 bp | AAACAAGTACTGAATTTTCTTTGGAAGCAAGTGAGAGTCCAGAGAGGAGGCAAGTCCATGGTCCCCCTTTaGGCCTTTTGGTCCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: KQVLNFLWKQVRVQRGGKSMVPL*AFWSWT Trigger: AGTCCAGGACCAAAAGGCCAAAAGGGGGACCATGGA...CTTGCCTCCTCTCTGGACTCTCACTTGCTTCCAAAGAAAATTCAGTACTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047095.4 ENSMUST00000225792.2 |
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| CDS-3UTR CAA 90 bp | CAGCTTCCATTCATGTCCTCATGCCACAACCAAATATATCCTCTCCCCTCAAAAGCCTGTGGCCACTTCTaGAATGGCCTTGTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: QLPFMSSCHNQIYPLPSKACGHF*NGLVLF Trigger: GAAGAGAACAAGGCCATTCAAGAAGTGGCCACAGGC...TTTTGAGGGGAGAGGATATATTTGGTTGTGGCATGAGGACATGAATGGAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CAA 90 bp | CAGCTTCCATTCATGTCCTCATGCCACAACCAAATATATCCTCTCCCCTCAAAAAGCCTTGAAGGAAGCTaGACAGGAAATGTCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: QLPFMSSCHNQIYPLPSKSLEGS*TGNVIP Trigger: TGGAATGACATTTCCTGTCAAGCTTCCTTCAAGGCT...TTTTGAGGGGAGAGGATATATTTGGTTGTGGCATGAGGACATGAATGGAAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS-3UTR CAA 90 bp | GTGACAATTCACGGAGAAAGGAAATTGGATGCTTTTATGGCTGAGATCAGCTACGAGAAGGCATGCAACTaGTTGGTTAGCTGCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: VTIHGERKLDAFMAEISYEKACN*LVSCSF Trigger: AAAACTGCAGCTAACCAACAAGTTGCATGCCTTCTC...GTAGCTGATCTCAGCCATAAAAGCATCCAATTTCCTTTCTCCGTGAATTGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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| CDS GCA 72 bp | CTCCCTTCTCCCCTTTGGGTCCATCTCTCCCATCTCTaGCACAGGCTATCACAGAGCAAGTCTTCAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: LPSPLWVHLSHL*HRLSQSKSSGC Trigger: ACACCCTGAAGACTTGCTCTGTGATAGCCTGTGGCAGAGATGGGAGAGATGGACCCAAAGGGGAGAAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047095.4 ENSMUST00000225792.2 |
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| CDS CAA 90 bp | TTAGCTGCAGTTTTGATTTCAGGATCCTTATCTCTGCCTCCATATTaGCCAGCTTCTCCTCAATGGCTCTATTGTCTCCATGGTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: LAAVLISGSLSLPPY*PASPQWLYCLHGPP Trigger: AGGGGGACCATGGAGACAATAGAGCCATTGAGGAGAAGCTGGCAAATATGGAGGCAGAGATAAGGATCCTGAAATCAAAACTGCAGCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225792.2 |
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