Pregenerated sensors for MBD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030322Ensembl transcript IDs: ENSMUST00000032469.13, ENSMUST00000122816.3, ENSMUST00000147282.4, ENSMUST00000203643.2
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAACCTTCAGGAGTGTGTTCCAGGGATGGAATTCAGATCATCATaGCTGGCAGCAAGTGACTTCATTTACTGGGCCACTTGCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: ANLQECVPGMEFRSS*LAASDFIYWATCWP Trigger: GGGCCAGCAAGTGGCCCAGTAAATGAAGTCACTTGCTGCCAGGCATGATGATCTGAATTCCATCCCTGGAACACACTCCTGAAGGTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR CCA 90 bp | ACCTTCAGGAGTGTGTTCCAGGGATGGAATTCAGATCATCATGCCTaGCAGCAAGTGACTTCATTTACTGGGCCACTTGCTGGCCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: TFRSVFQGWNSDHHA*QQVTSFTGPLAGPA Trigger: GGCAGGGCCAGCAAGTGGCCCAGTAAATGAAGTCACTTGCTGCCAGGCATGATGATCTGAATTCCATCCCTGGAACACACTCCTGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR CCA 90 bp | GCATCAATCCCAGGCACAGAGGAGACACACAATTATGGATGGGACTaGAGACAGAACTCAAGCGTTACCCTTGTTCCACCAATCTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: ASIPGTEETHNYGWD*RQNSSVTLVPPICA Trigger: TGCACAGATTGGTGGAACAAGGGTAACGCTTGAGTTCTGTCTCCAGTCCCATCCATAATTGTGTGTCTCCTCTGTGCCTGGGATTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR GCA 90 bp | TCAGTTACAGGATGGAGATGTAACTCAGTTGATAGAGTGCTTAGCTaGCACGCATTAAGCCCTGGGTTCTGTGCCCAGCACCACATAAAC | + |
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Preference number: 1 (lower is better) Translates to: SVTGWRCNSVDRVLS*HALSPGFCAQHHIN Trigger: GTTTATGTGGTGCTGGGCACAGAACCCAGGGCTTAATGCGTGGCAGCTAAGCACTCTATCAACTGAGTTACATCTCCATCCTGTAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| 3UTR CCA 90 bp | AAAGACGCATCAATCCCAGGCACAGAGGAGACACACAATTATGGATaGGACTGGAGACAGAACTCAAGCGTTACCCTTGTTCCACCAATC | + |
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Preference number: 1 (lower is better) Translates to: KDASIPGTEETHNYG*DWRQNSSVTLVPPI Trigger: GATTGGTGGAACAAGGGTAACGCTTGAGTTCTGTCTCCAGTCCCATCCATAATTGTGTGTCTCCTCTGTGCCTGGGATTGATGCGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR TCA 90 bp | AAGTCTCTCCAGCTATACAGTGAGACCCAGGCTGGCTGGGATACATaGAACCCTGTTCTCAAAAATCACTTAGGGCAGATATTGGGATCA | + |
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Preference number: 1 (lower is better) Translates to: KSLQLYSETQAGWDT*NPVLKNHLGQILGS Trigger: TGATCCCAATATCTGCCCTAAGTGATTTTTGAGAACAGGGTTTCATGTATCCCAGCCAGCCTGGGTCTCACTGTATAGCTGGAGAGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| 3UTR CCA 90 bp | TCAAGTGAAGGTAAGAGGCCAACCTTCAGGAGTGTGTTCCAGGGATaGAATTCAGATCATCATGCCTGGCAGCAAGTGACTTCATTTACT | + |
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Preference number: 1 (lower is better) Translates to: SSEGKRPTFRSVFQG*NSDHHAWQQVTSFT Trigger: AGTAAATGAAGTCACTTGCTGCCAGGCATGATGATCTGAATTCCATCCCTGGAACACACTCCTGAAGGTTGGCCTCTTACCTTCACTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR TCA 90 bp | CAGAGTCAGAAGGATACAATTTCGAAAGTCTCTCCAGCTATACAGTaGGACCCAGGCTGGCTGGGATACATGAAACCCTGTTCTCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: QSQKDTISKVSPAIQ*DPGWLGYMKPCSQK Trigger: TTTTTGAGAACAGGGTTTCATGTATCCCAGCCAGCCTGGGTCTCACTGTATAGCTGGAGAGACTTTCGAAATTGTATCCTTCTGACTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| 3UTR CCA 90 bp | AAAGGACATACATTGAGGAATTCTTATCCATTTCCTAGGTATATGTaGCCATCTGTTAAAGACGCATCAATCCCAGGCACAGAGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: KGHTLRNSYPFPRYM*PSVKDASIPGTEET Trigger: TGTCTCCTCTGTGCCTGGGATTGATGCGTCTTTAACAGATGGCCACATATACCTAGGAAATGGATAAGAATTCCTCAATGTATGTCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR GCA 90 bp | AGATCTTTTTATCTATTATTCACTGAGGCATTGTATAGACAAGTCTaGCAAGCCCAGGACTCTTGTGTGAAGAGCACAGTACAAATAATA | + |
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Preference number: 1 (lower is better) Translates to: RSFYLLFTEALYRQV*QAQDSCVKSTVQII Trigger: TATTATTTGTACTGTGCTCTTCACACAAGAGTCCTGGGCTTGGCAGACTTGTCTATACAATGCCTCAGTGAATAATAGATAAAAAGATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR TCA 90 bp | TGGGAAACTTCAAACAGGCAGCTTCAAGATAGACTTAATTTTTCATaGTTCTCCCAAAGCCAGTCATGGTATTTATTTAACTTGTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: WETSNRQLQDRLNFS*FSQSQSWYLFNLWS Trigger: AGACCACAAGTTAAATAAATACCATGACTGGCTTTGGGAGAATCATGAAAAATTAAGTCTATCTTGAAGCTGCCTGTTTGAAGTTTCCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR-3UTR TCA 90 bp | AAATCCACGTGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGCTGGCTGGGATACATaGAACCCTGTTCTCAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: KSTCREGSSLHTTGPLETAGWDT*NPVLKN Trigger: ATTTTTGAGAACAGGGTTTCATGTATCCCAGCCAGC...GGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCACGTGGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR-3UTR TCA 90 bp | CACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGAGGGGTCCATTTCTTaGAGGATTTGCGTCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HRALRNRSTRRRMGNFKQEGSIS*RICVLG Trigger: CCCCAAGACGCAAATCCTTCAAGAAATGGACCCCTC...CTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCAGAAGCCCTGGGTTCTGTaGCCAGCACCACATAAACTT | + |
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Preference number: 2 (lower is better) Translates to: GPLETEAQGDAWETSNRQKPWVL*PAPHKL Trigger: AAGTTTATGTGGTGCTGGGCACAGAACCCAGGGCTT...CTGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR-3UTR TCA 90 bp | CACTCTCATAAGCCAGGCTGCCTTGAATTCAGAGGTCCTCTTGCATCAGCATCCGAAGCCAAAAGAAGGTaGCAGATCCCCAGGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HSHKPGCLEFRGPLASASEAKRR*QIPRSC Trigger: ACAGCTCCTGGGGATCTGTCACCTTCTTTTGGCTTC...GGATGCTGATGCAAGAGGACCTCTGAATTCAAGGCAGCCTGGCTTATGAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR-3UTR GCA 90 bp | CGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCTGCCATATTTACCAATaGCATGAAGCTCAATCGGAT | + |
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Preference number: 2 (lower is better) Translates to: REGSSLHTTGPLETEAQGCHIYQ*HEAQSD Trigger: ATCCGATTGAGCTTCATGGCATTGGTAAATATGGCA...GCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR CAA 90 bp | AGAAACTCCCACAGCACAGGGATGGCCATCTTGCCTGAGGTCCGATaGAGAAATATAGTCGCGATGAGGAGCTTCCATGGGTCATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RNSHSTGMAILPEVR*RNIVAMRSFHGSWK Trigger: TTTCCATGACCCATGGAAGCTCCTCATCGCGACTATATTTCTCAATCGGACCTCAGGCAAGATGGCCATCCCTGTGCTGTGGGAGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR CAA 90 bp | GAAGGGTACTTCTCTAGAAACTCCCACAGCACAGGGATGGCCATCTaGCCTGAGGTCCGATTGAGAAATATAGTCGCGATGAGGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: EGYFSRNSHSTGMAI*PEVRLRNIVAMRSF Trigger: GAAGCTCCTCATCGCGACTATATTTCTCAATCGGACCTCAGGCAAGATGGCCATCCCTGTGCTGTGGGAGTTTCTAGAGAAGTACCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGACGCATCAATCCCAGGCACAGAGGAGACACACAATTATGGATGGGACTCCACGCATTAAGCCCTaGGTTCTGTGCCCAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: LKTHQSQAQRRHTIMDGTPRIKP*VLCPAP Trigger: TGGTGCTGGGCACAGAACCCAGGGCTTAATGCGTGG...AGTCCCATCCATAATTGTGTGTCTCCTCTGTGCCTGGGATTGATGCGTCTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR-3UTR CCA 90 bp | CGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCAGATCAGTTACAGGATaGAGATGTAACTCAGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: REGSSLHTTGPLETEAQGRSVTG*RCNSVD Trigger: ATCAACTGAGTTACATCTCCATCCTGTAACTGATCT...GCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCAGTATTTATTTAACTTGTaGTCTTCAGGGTGCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: GPLETEAQGDAWETSNRQYLFNL*SSGCTC Trigger: GCAGGTGCACCCTGAAGACCACAAGTTAAATAAATA...CTGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR CAA 90 bp | CACACAATTATGGATGGGACTGGAGACAGAACTCAAGCGTTACCCTaGTTCCACCAATCTGTGCAGGCTGTGTTCCCAAAGGAATCTAAG | + |
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Preference number: 2 (lower is better) Translates to: HTIMDGTGDRTQALP*FHQSVQAVFPKESK Trigger: CTTAGATTCCTTTGGGAACACAGCCTGCACAGATTGGTGGAACAAGGGTAACGCTTGAGTTCTGTCTCCAGTCCCATCCATAATTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGACTCCCAAGTGTTAGGATTATAGTAGTATACCATGATGACTGGCATGGGATGCCTGGCAGCAAGTaGCTTCATTTACTGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SRLPSVRIIVVYHDDWHGMPGSK*LHLLGH Trigger: GTGGCCCAGTAAATGAAGTCACTTGCTGCCAGGCAT...CCCATGCCAGTCATCATGGTATACTACTATAATCCTAACACTTGGGAGTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTCGGGCCACTTCAGCTGAAGGGTACTTCTCTAGAAACTCCCACAGCACACTTCTTTGTTGTACTTaGTGGAAAAATACAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: AARATSAEGYFSRNSHSTLLCCT*WKNTGL Trigger: CAAGCCTGTATTTTTCCAGCAAGTACAACAAAGAAG...TGTGCTGTGGGAGTTTCTAGAGAAGTACCCTTCAGCTGAAGTGGCCCGAGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTCGGGCCACTTCAGCTGAAGGGTACTTCTCTAGAAACTCCCACAGCACACTTTGTTGTACTTGCTaGAAAAATACAGGCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: AARATSAEGYFSRNSHSTLCCTC*KNTGLF Trigger: AAACAAGCCTGTATTTTTCCAGCAAGTACAACAAAG...TGTGCTGTGGGAGTTTCTAGAGAAGTACCCTTCAGCTGAAGTGGCCCGAGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR CAA 90 bp | AACCCAGGGCTGCTCAGATCTTTTTATCTATTATTCACTGAGGCATaGTATAGACAAGTCTGCCAAGCCCAGGACTCTTGTGTGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: NPGLLRSFYLLFTEA*YRQVCQAQDSCVKS Trigger: GCTCTTCACACAAGAGTCCTGGGCTTGGCAGACTTGTCTATACAATGCCTCAGTGAATAATAGATAAAAAGATCTGAGCAGCCCTGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR-3UTR TCA 90 bp | ACATTGAGGAATTCTTATCCATTTCCTAGGTATATGTGGCCATCTGTTAAAGACTCTCCAGCTATACAGTaGGACCCAGGCTGGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TLRNSYPFPRYMWPSVKDSPAIQ*DPGWLG Trigger: TCCCAGCCAGCCTGGGTCTCACTGTATAGCTGGAGA...GTCTTTAACAGATGGCCACATATACCTAGGAAATGGATAAGAATTCCTCAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR-3UTR CCA 90 bp | ATTCCATTAAACAAGACAGACAGACACTTCTGCAGACATAGCTTATTTAGTCCAGTAGCCAGGCAGTGGTaGCGCATGCCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: IPLNKTDRHFCRHSLFSPVARQW*RMPLIP Trigger: TGGGATTAAAGGCATGCGCCACCACTGCCTGGCTAC...TGGACTAAATAAGCTATGTCTGCAGAAGTGTCTGTCTGTCTTGTTTAATGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGGTCCTCTTGCATCAGCATCCCAGGTACTGTGTATGTATTTTCATCACAGCATATTAAACTACTaGACCATCTCTCTGCAGACC | + |
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Preference number: 2 (lower is better) Translates to: FRGPLASASQVLCMYFHHSILNY*TISLQT Trigger: GGTCTGCAGAGAGATGGTTCAGTAGTTTAATATGCT...GTGATGAAAATACATACACAGTACCTGGGATGCTGATGCAAGAGGACCTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR-3UTR CCA 90 bp | CTATTATTCACTGAGGCATTGTATAGACAAGTCTGCCAAGCCCAGGACTCTTGTCAGATGAAATTAAATTaGGAGTCACACAGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LLFTEALYRQVCQAQDSCQMKLN*ESHSSS Trigger: GCTGCTGCTGTGTGACTCCCAATTTAATTTCATCTG...ACAAGAGTCCTGGGCTTGGCAGACTTGTCTATACAATGCCTCAGTGAATAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGACGCATCAATCCCAGGCACAGAGGAGACACACAATTATGGATGGGACTAGATCAGTTACAGGATaGAGATGTAACTCAGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LKTHQSQAQRRHTIMDGTRSVTG*RCNSVD Trigger: ATCAACTGAGTTACATCTCCATCCTGTAACTGATCT...AGTCCCATCCATAATTGTGTGTCTCCTCTGTGCCTGGGATTGATGCGTCTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR-3UTR GCA 90 bp | ATTCCATTAAACAAGACAGACAGACACTTCTGCAGACATAGCTTATTTAGTCCAGAATTCAGATCATCATaGCTGGCAGCAAGTGACTTC | + |
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Preference number: 2 (lower is better) Translates to: IPLNKTDRHFCRHSLFSPEFRSS*LAASDF Trigger: GAAGTCACTTGCTGCCAGGCATGATGATCTGAATTC...TGGACTAAATAAGCTATGTCTGCAGAAGTGTCTGTCTGTCTTGTTTAATGGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR-3UTR CAA 90 bp | CCGACACGTCCCTCCAGTCGGCAGCTCGGGCCACTTCAGCTGAAGGGTACTTCTTTGCCTGAGGTCCGATaGAGAAATATAGTCGCGATG | + |
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Preference number: 3 (lower is better) Translates to: PTRPSSRQLGPLQLKGTSLPEVR*RNIVAM Trigger: CATCGCGACTATATTTCTCAATCGGACCTCAGGCAA...AGAAGTACCCTTCAGCTGAAGTGGCCCGAGCTGCCGACTGGAGGGACGTGTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR TCA 72 bp | TGGTTTTTGCACGGAGATCGTAGAGACCAAGAGGCTTaGGAAGCTCCGACACGTCCCTCCAGTCGGCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: WFLHGDRRDQEA*EAPTRPSSRQL Trigger: GAGCTGCCGACTGGAGGGACGTGTCGGAGCTTCTCAAGCCTCTTGGTCTCTACGATCTCCGTGCAAAAACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR GCA 72 bp | TCTACTTGTGTCCGTGGGATGCTGTCTTCTCTTAGCTaGTGTCCAGGGAGAGGTGGTAGCAGCCATCACACA | + |
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Preference number: 3 (lower is better) Translates to: STCVRGMLSSLS*CPGRGGSSHHT Trigger: TGTGTGATGGCTGCTACCACCTCTCCCTGGACAGCAGCTAAGAGAAGACAGCATCCCACGGACACAAGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR-3UTR CAA 90 bp | CACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGCTGCCCTGTTTGTGCTaGAGGCAGAGTCTCTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: HRALRNRSTRRRMGNFKQLPCLC*RQSLSL Trigger: TAGAGAGAGACTCTGCCTCAAGCACAAACAGGGCAG...CTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR-3UTR CAA 90 bp | CACGTGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCGCTTCTTTGTTGTACTaGCTGGAAAAATACAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: HVPGRELTAHHRALRNRSASLLY*LEKYRL Trigger: AAGCCTGTATTTTTCCAGCAAGTACAACAAAGAAGC...GCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCACGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR TCA 72 bp | CGGGGCCAGAGCAGGGCCAGAAGCAAGCAGAGGTCCTaGGTTCAATTCCCAACAATCACATTATGGCTCATA | + |
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Preference number: 3 (lower is better) Translates to: RGQSRARSKQRS*VQFPTITLWLI Trigger: TATGAGCCATAATGTGATTGTTGGGAATTGAACTCAGGACCTCTGCTTGCTTCTGGCCCTGCTCTGGCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR GCA 72 bp | GGATGGAGATGTAACTCAGTTGATAGAGTGCTTAGCTaGCACGCATTAAGCCCTGGGTTCTGTGCCCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GWRCNSVDRVLS*HALSPGFCAQH Trigger: GTGCTGGGCACAGAACCCAGGGCTTAATGCGTGGCAGCTAAGCACTCTATCAACTGAGTTACATCTCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| 3UTR-3UTR CAA 90 bp | AAATCCACGTGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGATACCTCCACTGCTTaGTCAGATATTCATCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: KSTCREGSSLHTTGPLETDTSTA*SDIHLR Trigger: TCTCAGATGAATATCTGACAAAGCAGTGGAGGTATC...GGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCACGTGGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR CCA 72 bp | GGTAAGAGGCCAACCTTCAGGAGTGTGTTCCAGGGATaGAATTCAGATCATCATGCCTGGCAGCAAGTGACT | + |
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Preference number: 3 (lower is better) Translates to: GKRPTFRSVFQG*NSDHHAWQQVT Trigger: AGTCACTTGCTGCCAGGCATGATGATCTGAATTCCATCCCTGGAACACACTCCTGAAGGTTGGCCTCTTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR CCA 72 bp | CGCATCAATCCCAGGCACAGAGGAGACACACAATTATaGATGGGACTGGAGACAGAACTCAAGCGTTACCCT | + |
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Preference number: 3 (lower is better) Translates to: RINPRHRGDTQL*MGLETELKRYP Trigger: AGGGTAACGCTTGAGTTCTGTCTCCAGTCCCATCCATAATTGTGTGTCTCCTCTGTGCCTGGGATTGATGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGCACCGGAGGGGCAGGAAGGTGCCGACTATTCTTGGTCAGTTTATAAAACAGCACCACATAAACTaGCATAGTGGCACATGCCTT | + |
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Preference number: 3 (lower is better) Translates to: QQHRRGRKVPTILGQFIKQHHIN*HSGTCL Trigger: AAGGCATGTGCCACTATGCAAGTTTATGTGGTGCTG...TTTTATAAACTGACCAAGAATAGTCGGCACCTTCCTGCCCCTCCGGTGCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| 3UTR CCA 72 bp | ACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATaGGAAACTTCAAACAGGCAGCTTCAAGATAGACTT | + |
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Preference number: 3 (lower is better) Translates to: TGPLETEAQGDA*ETSNRQLQDRL Trigger: AAGTCTATCTTGAAGCTGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
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| 3UTR GCA 72 bp | TTCCTCAGCCTCCTGAGTGCTGGGATTACAGGGGTGTaGCACCATGTAAGGTCAATTCGGTTTTTAGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: FLSLLSAGITGV*HHVRSIRFLVS Trigger: ACTAACTAAAAACCGAATTGACCTTACATGGTGGCACACCCCTGTAATCCCAGCACTCAGGAGGCTGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR CCA 72 bp | AGTGTGTTCCAGGGATGGAATTCAGATCATCATGCCTaGCAGCAAGTGACTTCATTTACTGGGCCACTTGCT | + |
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Preference number: 3 (lower is better) Translates to: SVFQGWNSDHHA*QQVTSFTGPLA Trigger: AGCAAGTGGCCCAGTAAATGAAGTCACTTGCTGCCAGGCATGATGATCTGAATTCCATCCCTGGAACACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| 3UTR-3UTR CAA 90 bp | GCAGCTCGGGCCACTTCAGCTGAAGGGTACTTCTCTAGAAACTCCCACAGCACACTAAGAGCTTCTTTGTaGTACTTGCTGGAAAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: AARATSAEGYFSRNSHSTLRASL*YLLEKY Trigger: GTATTTTTCCAGCAAGTACAACAAAGAAGCTCTTAG...TGTGCTGTGGGAGTTTCTAGAGAAGTACCCTTCAGCTGAAGTGGCCCGAGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| 3UTR TCA 72 bp | CAGCTATACAGTGAGACCCAGGCTGGCTGGGATACATaGAACCCTGTTCTCAAAAATCACTTAGGGCAGATA | + |
|
Preference number: 3 (lower is better) Translates to: QLYSETQAGWDT*NPVLKNHLGQI Trigger: TATCTGCCCTAAGTGATTTTTGAGAACAGGGTTTCATGTATCCCAGCCAGCCTGGGTCTCACTGTATAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| 3UTR TCA 72 bp | AAGGATACAATTTCGAAAGTCTCTCCAGCTATACAGTaGGACCCAGGCTGGCTGGGATACATGAAACCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KDTISKVSPAIQ*DPGWLGYMKPC Trigger: ACAGGGTTTCATGTATCCCAGCCAGCCTGGGTCTCACTGTATAGCTGGAGAGACTTTCGAAATTGTATCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| 3UTR CCA 72 bp | GGGCCTGATGACCAAGCTCAAAGATCAGTTACAGGATaGAGATGTAACTCAGTTGATAGAGTGCTTAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GPDDQAQRSVTG*RCNSVDRVLSC Trigger: GCAGCTAAGCACTCTATCAACTGAGTTACATCTCCATCCTGTAACTGATCTTTGAGCTTGGTCATCAGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| 3UTR CCA 72 bp | GCAGCACCGGAGGGGCAGGAAGGTGCCGACTATTCTTaGTCAGTTTATAAAAGGAGTCTTATCTACATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AAPEGQEGADYS*SVYKRSLIYIL Trigger: AAGAATGTAGATAAGACTCCTTTTATAAACTGACCAAGAATAGTCGGCACCTTCCTGCCCCTCCGGTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| 3UTR GCA 72 bp | TATCTATTATTCACTGAGGCATTGTATAGACAAGTCTaGCAAGCCCAGGACTCTTGTGTGAAGAGCACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: YLLFTEALYRQV*QAQDSCVKSTV Trigger: TACTGTGCTCTTCACACAAGAGTCCTGGGCTTGGCAGACTTGTCTATACAATGCCTCAGTGAATAATAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| 3UTR CCA 72 bp | ACATTGAGGAATTCTTATCCATTTCCTAGGTATATGTaGCCATCTGTTAAAGACGCATCAATCCCAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: TLRNSYPFPRYM*PSVKDASIPGT Trigger: TGTGCCTGGGATTGATGCGTCTTTAACAGATGGCCACATATACCTAGGAAATGGATAAGAATTCCTCAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| 3UTR GCA 72 bp | ATGTATTTTCATCACATATACATTATAAGGCCCATCTaGTCATTGTCTGTGTGTGTGCCACTAGTGGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: MYFHHIYIIRPI*SLSVCVPLVDL Trigger: AAGATCCACTAGTGGCACACACACAGACAATGAGCAGATGGGCCTTATAATGTATATGTGATGAAAATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| 3UTR TCA 72 bp | CAATCCAATGCTTTAAGAAGCTCAAAGGACATACATTaGGGAATTCTTATCCATTTCCTAGGTATATGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QSNALRSSKDIH*GILIHFLGICG Trigger: GCCACATATACCTAGGAAATGGATAAGAATTCCTCAATGTATGTCCTTTGAGCTTCTTAAAGCATTGGATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| 3UTR GCA 72 bp | AAAAGAATTCCATTAAACAAGACAGACAGACACTTCTaGAGACATAGCTTATTTAGTCCAACAAACTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KRIPLNKTDRHF*RHSLFSPTNLV Trigger: AACCAAGTTTGTTGGACTAAATAAGCTATGTCTGCAGAAGTGTCTGTCTGTCTTGTTTAATGGAATTCTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR TCA 90 bp | ATCCACGTGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGAGACCAAGAGGCTTaGGAAGCTCCGACACGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IHVPGRELTAHHRALRNRRDQEA*EAPTRP Trigger: GGGACGTGTCGGAGCTTCTCAAGCCTCTTGGTCTCT...TCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCACGTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR TCA 90 bp | CGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCCAGTCCTGGGCTTGGTaGTTTTTCTTCCCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REGSSLHTTGPLETEAQGQSWAW*FFFPSQ Trigger: CTGGCTGGGGAAGAAAAATCACCAAGCCCAGGACTG...GCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | ATCCACGTGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAGAGGGGTCCATTTCTTaGAGGATTTGCGTCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHVPGRELTAHHRALRNREGSIS*RICVLG Trigger: CCCCAAGACGCAAATCCTTCAAGAAATGGACCCCTC...TCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCACGTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR TCA 90 bp | CGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGAGGGGTCCATTTCTTaGAGGATTTGCGTCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: REGSSLHTTGPLETEAQGEGSIS*RICVLG Trigger: CCCCAAGACGCAAATCCTTCAAGAAATGGACCCCTC...GCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR GCA 90 bp | AAATCCACGTGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCCCTTGCACAGGCATCTaGAGGGCAGAGGGTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSTCREGSSLHTTGPLETPCTGI*RAEGSV Trigger: AACAGAACCCTCTGCCCTGCAGATGCCTGTGCAAGG...GGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCACGTGGATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGTGGTAGCAGCCATCACACACCAGTCTTCCAATGCTGAGCATCCTGGCGCCAACAGTCTCCCTTaGACAGGCATCTGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEVVAAITHQSSNAEHPGANSLP*TGICRA Trigger: TGCCCTGCAGATGCCTGTGCAAGGGAGACTGTTGGC...GCCAGGATGCTCAGCATTGGAAGACTGGTGTGTGATGGCTGCTACCACCTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | GAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGCAGAGGGTTCTGTTaGGTTGACTTTCCTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELTAHHRALRNRSTRRRMGRGFC*VDFPVA Trigger: TGCCACAGGAAAGTCAACTCAACAGAACCCTCTGCC...CATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | TCGGCAGCTCGGGCCACTTCAGCTGAAGGGTACTTCTCTAGAAACTCCCACAGCCAGTCCTGGGCTTGGTaGTTTTTCTTCCCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAARATSAEGYFSRNSHSQSWAW*FFFPSQ Trigger: CTGGCTGGGGAAGAAAAATCACCAAGCCCAGGACTG...GCTGTGGGAGTTTCTAGAGAAGTACCCTTCAGCTGAAGTGGCCCGAGCTGCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGTGGTAGCAGCCATCACACACCAGTCTTCCAATGCTGAGCATCCTGGCGGGAGCTGCGCTCACTaGTTATCACCAGGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GEVVAAITHQSSNAEHPGGSCAH*LSPGPF Trigger: GAAAGGACCTGGTGATAAGCAGTGAGCGCAGCTCCC...GCCAGGATGCTCAGCATTGGAAGACTGGTGTGTGATGGCTGCTACCACCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | GGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCAGGCCAACAGTCTCCCTTaGACAGGCATCTGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPLETEAQGDAWETSNRQANSLP*TGICRA Trigger: TGCCCTGCAGATGCCTGTGCAAGGGAGACTGTTGGC...CTGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CCA 90 bp | CCCTGTTTGTGCTTGAGGCAGAGTCTCTCTCTACACAGAAGAGGCAGGCCCTCAGAAGCAGTGGGCTCTTaGAGAAGGGAGCTGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PCLCLRQSLSLHRRGRPSEAVGS*RRELRS Trigger: TGAGCGCAGCTCCCTTCTCCAAGAGCCCACTGCTTC...TGAGGGCCTGCCTCTTCTGTGTAGAGAGAGACTCTGCCTCAAGCACAAACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR CCA 90 bp | AGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGTGGCTTGTGAGCAGCTaGGCATTTCAGAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLHTTGPLETEAQGDAWWLVSS*AFQSHP Trigger: AGGATGGCTCTGAAATGCCCAGCTGCTCACAAGCCA...CCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| 3UTR CAA 72 bp | TTACTGGGCCACTTGCTGGCCCTGCCCTGTTTGTGCTaGAGGCAGAGTCTCTCTCTACACAGAAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGHLLALPCLC*RQSLSLHRRGR Trigger: CCTGCCTCTTCTGTGTAGAGAGAGACTCTGCCTCAAGCACAAACAGGGCAGGGCCAGCAAGTGGCCCAGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGTGGTAGCAGCCATCACACACCAGTCTTCCAATGCTGAGCATCCTGGCGGCAGAGGGTTCTGTTaGGTTGACTTTCCTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEVVAAITHQSSNAEHPGGRGFC*VDFPVA Trigger: TGCCACAGGAAAGTCAACTCAACAGAACCCTCTGCC...GCCAGGATGCTCAGCATTGGAAGACTGGTGTGTGATGGCTGCTACCACCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | TCGGCAGCTCGGGCCACTTCAGCTGAAGGGTACTTCTCTAGAAACTCCCACAGCGGCAGAGGGTTCTGTTaGGTTGACTTTCCTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAARATSAEGYFSRNSHSGRGFC*VDFPVA Trigger: TGCCACAGGAAAGTCAACTCAACAGAACCCTCTGCC...GCTGTGGGAGTTTCTAGAGAAGTACCCTTCAGCTGAAGTGGCCCGAGCTGCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | CGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCTTGTGGTCTTCAGGGTaGACCTGCTTCCATTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: REGSSLHTTGPLETEAQGLWSSG*TCFHSL Trigger: CAATGAATGGAAGCAGGTGCACCCTGAAGACCACAA...GCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR CCA 90 bp | ACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACGAAGCAGTGGGCTCTTaGAGAAGGGAGCTGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTGPLETEAQGDAWETSNEAVGS*RRELRS Trigger: TGAGCGCAGCTCCCTTCTCCAAGAGCCCACTGCTTC...GTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGTGGTAGCAGCCATCACACACCAGTCTTCCAATGCTGAGCATCCTGGCTGGCTTGTGAGCAGCTaGGCATTTCAGAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GEVVAAITHQSSNAEHPGWLVSS*AFQSHP Trigger: AGGATGGCTCTGAAATGCCCAGCTGCTCACAAGCCA...GCCAGGATGCTCAGCATTGGAAGACTGGTGTGTGATGGCTGCTACCACCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | CACGTGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACCTGCTGCTTCAGTTaGATGGAATTTGTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HVPGRELTAHHRALRNRSTCCFS*MEFVCG Trigger: ACCACAAACAAATTCCATTCAACTGAAGCAGCAGGT...GCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | CACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGCCTTGCACAGGCATCTaGAGGGCAGAGGGTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HRALRNRSTRRRMGNFKQPCTGI*RAEGSV Trigger: AACAGAACCCTCTGCCCTGCAGATGCCTGTGCAAGG...CTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | CCAAAGCTGCCTTCACACTCTCATAAGCCAGGCTGCCTTGAATTCAGAGGTCCTGCCAACAGTCTCCCTTaGACAGGCATCTGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKLPSHSHKPGCLEFRGPANSLP*TGICRA Trigger: TGCCCTGCAGATGCCTGTGCAAGGGAGACTGTTGGC...AGGACCTCTGAATTCAAGGCAGCCTGGCTTATGAGAGTGTGAAGGCAGCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR GCA 90 bp | CGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCTCCGGTAGGAGTCGTTaGCATATTTACCAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: REGSSLHTTGPLETEAQGSGRSR*HIYQCH Trigger: ATGGCATTGGTAAATATGGCAACGACTCCTACCGGA...GCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| 3UTR CAA 72 bp | CACAGCACAGGGATGGCCATCTTGCCTGAGGTCCGATaGAGAAATATAGTCGCGATGAGGAGCTTCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSTGMAILPEVR*RNIVAMRSFHG Trigger: CCCATGGAAGCTCCTCATCGCGACTATATTTCTCAATCGGACCTCAGGCAAGATGGCCATCCCTGTGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | GCAGCAGCACCGGAGGGGCAGGAAGGTGCCGACTATTCTTGGTCAGTTTATAAAAGGGTTCTGTTGAGTTaGCTTTCCTGTGGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAAPEGQEGADYSWSVYKRVLLS*LSCGTS Trigger: GCTGGTGCCACAGGAAAGTCAACTCAACAGAACCCT...TTTATAAACTGACCAAGAATAGTCGGCACCTTCCTGCCCCTCCGGTGCTGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR TCA 90 bp | CCAAAAGAAGGTGACAGATCCCCAGGAGCTGTTATAAGCAGTTGTGAGCTGCCTAGAGACCAAGAGGCTTaGGAAGCTCCGACACGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKEGDRSPGAVISSCELPRDQEA*EAPTRP Trigger: GGGACGTGTCGGAGCTTCTCAAGCCTCTTGGTCTCT...AGGCAGCTCACAACTGCTTATAACAGCTCCTGGGGATCTGTCACCTTCTTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR TCA 90 bp | GGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATATTTACCAATGCCATaGAGCTCAATCGGATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSLHTTGPLETEAQGDAYLPMP*SSIGYL Trigger: GAGGTATCCGATTGAGCTTCATGGCATTGGTAAATA...TGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR GCA 90 bp | TGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAACTTGTGTCCGTGGGATaGTGTCTTCTTGAAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CREGSSLHTTGPLETEAQLVSVG*CLLEMS Trigger: AGACATTTCAAGAAGACAGCATCCCACGGACACAAG...TTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| 3UTR CAA 72 bp | CAAAGCTGCCTTCACACTCTCATAAGCCAGGCTGCCTaGAATTCAGAGGTCCTCTTGCATCAGCATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSCLHTLISQAA*NSEVLLHQHPR Trigger: CCTGGGATGCTGATGCAAGAGGACCTCTGAATTCAAGGCAGCCTGGCTTATGAGAGTGTGAAGGCAGCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR TCA 90 bp | CCAAAGCTGCCTTCACACTCTCATAAGCCAGGCTGCCTTGAATTCAGAGGTCCTAGGGTTCTGTTGAGTTaGCTTTCCTGTGGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKLPSHSHKPGCLEFRGPRVLLS*LSCGTS Trigger: GCTGGTGCCACAGGAAAGTCAACTCAACAGAACCCT...AGGACCTCTGAATTCAAGGCAGCCTGGCTTATGAGAGTGTGAAGGCAGCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR TCA 90 bp | CTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTAACAAGATTAAAAGGTaGCCGAGGAGGGGTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTTGPLETEAQGDAWETNKIKR*PRRGPF Trigger: AAATGGACCCCTCCTCGGTCACCTTTTAATCTTGTT...AGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGCAGGGAAGTCAGAGCTaGCAAACTTTGGTGTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: ELTAHHRALRNRSTRRRMQGSQS*QTLVFI Trigger: TATAAACACCAAAGTTTGGCAGCTCTGACTTCCCTG...CATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | CACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGTCAGTTTCATTTGGCTaGAGGGAAGTCAGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HRALRNRSTRRRMGNFKQSVSFG*REVRAA Trigger: GGCAGCTCTGACTTCCCTGCAGCCAAATGAAACTGA...CTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | AGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGTGTAAAACACCAGTATaGAAATGTGCCTCCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLHTTGPLETEAQGDAWCKTPV*KCASPF Trigger: AAAGGGGGAGGCACATTTGCATACTGGTGTTTTACA...CCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGATGTAAAACACCAGTATaGAAATGTGCCTCCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRELTAHHRALRNRSTRRCKTPV*KCASPF Trigger: AAAGGGGGAGGCACATTTGCATACTGGTGTTTTACA...TCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | CACGTGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCCTTCTTTGTTGTACTTaGTGGAAAAATACAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HVPGRELTAHHRALRNRSLLCCT*WKNTGL Trigger: CAAGCCTGTATTTTTCCAGCAAGTACAACAAAGAAG...GCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCACGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR GCA 90 bp | TCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAATCCGGTAGGAGTCGTTaGCATATTTACCAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLHTTGPLETEAQGDAWESGRSR*HIYQCH Trigger: ATGGCATTGGTAAATATGGCAACGACTCCTACCGGA...TTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR CCA 90 bp | TGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGATGAGGAGCTTCCATaGGTCATGGAAAAGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CREGSSLHTTGPLETEAQDEELP*VMEKYF Trigger: GAAATACTTTTCCATGACCCATGGAAGCTCCTCATC...TTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCTCGGGCCACTTCAGCTGAAGGGTACTTCTCTAGAAACTCCCACAGCACAGTGAACGTTTTGATCTaGACTTCAATCCTTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AARATSAEGYFSRNSHSTVNVLI*TSILVG Trigger: GCCCACAAGGATTGAAGTTCAGATCAAAACGTTCAC...TGTGCTGTGGGAGTTTCTAGAGAAGTACCCTTCAGCTGAAGTGGCCCGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGTGGTAGCAGCCATCACACACCAGTCTTCCAATGCTGAGCATCCTGGCACCTGCTGCTTCAGTTaGATGGAATTTGTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GEVVAAITHQSSNAEHPGTCCFS*MEFVCG Trigger: ACCACAAACAAATTCCATTCAACTGAAGCAGCAGGT...GCCAGGATGCTCAGCATTGGAAGACTGGTGTGTGATGGCTGCTACCACCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGATGTCTCCCTTCGATCTaGTTTCCTCTGATTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRELTAHHRALRNRSTRRCLPSI*FPLILK Trigger: TTTTAGAATCAGAGGAAATCAGATCGAAGGGAGACA...TCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | TCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAATATTTACCAATGCCATaGAGCTCAATCGGATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLHTTGPLETEAQGDAWEYLPMP*SSIGYL Trigger: GAGGTATCCGATTGAGCTTCATGGCATTGGTAAATA...TTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGAGGCCAACCTTCAGGAGTGTGTTCCAGGGATGGAATTCAGATCATCATGGGGAGCTGCGCTCACTaGTTATCACCAGGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRGQPSGVCSRDGIQIIMGSCAH*LSPGPF Trigger: GAAAGGACCTGGTGATAAGCAGTGAGCGCAGCTCCC...CATGATGATCTGAATTCCATCCCTGGAACACACTCCTGAAGGTTGGCCTCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGTGGTAGCAGCCATCACACACCAGTCTTCCAATGCTGAGCATCCTGGCCAGGGAAGTCAGAGCTaGCAAACTTTGGTGTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: GEVVAAITHQSSNAEHPGQGSQS*QTLVFI Trigger: TATAAACACCAAAGTTTGGCAGCTCTGACTTCCCTG...GCCAGGATGCTCAGCATTGGAAGACTGGTGTGTGATGGCTGCTACCACCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | TCGGCAGCTCGGGCCACTTCAGCTGAAGGGTACTTCTCTAGAAACTCCCACAGCCAGGGAAGTCAGAGCTaGCAAACTTTGGTGTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: SAARATSAEGYFSRNSHSQGSQS*QTLVFI Trigger: TATAAACACCAAAGTTTGGCAGCTCTGACTTCCCTG...GCTGTGGGAGTTTCTAGAGAAGTACCCTTCAGCTGAAGTGGCCCGAGCTGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGCACCGGAGGGGCAGGAAGGTGCCGACTATTCTTGGTCAGTTTATAAAAACGTCAGTTTCATTTaGCTGCAGGGAAGTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAAPEGQEGADYSWSVYKNVSFI*LQGSQS Trigger: GCTCTGACTTCCCTGCAGCCAAATGAAACTGACGTT...TTTATAAACTGACCAAGAATAGTCGGCACCTTCCTGCCCCTCCGGTGCTGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGGAGCTGTTATAAGCAGTTGTGAGCTGCCTGATGTGGGTGCTAAAAAGTGGCTTGTGAGCAGCTaGGCATTTCAGAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPGAVISSCELPDVGAKKWLVSS*AFQSHP Trigger: AGGATGGCTCTGAAATGCCCAGCTGCTCACAAGCCA...CTTTTTAGCACCCACATCAGGCAGCTCACAACTGCTTATAACAGCTCCTGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR CCA 90 bp | TGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAATATTTATTTAACTTGTaGTCTTCAGGGTGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CREGSSLHTTGPLETEAQYLFNL*SSGCTC Trigger: GCAGGTGCACCCTGAAGACCACAAGTTAAATAAATA...TTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR CCA 90 bp | CGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCTCCCAAAGCCAGTCATaGTATTTATTTAACTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: REGSSLHTTGPLETEAQGSQSQS*YLFNLW Trigger: CCACAAGTTAAATAAATACCATGACTGGCTTTGGGA...GCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| 3UTR CAA 72 bp | ATGGATGGGACTGGAGACAGAACTCAAGCGTTACCCTaGTTCCACCAATCTGTGCAGGCTGTGTTCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MDGTGDRTQALP*FHQSVQAVFPK Trigger: CTTTGGGAACACAGCCTGCACAGATTGGTGGAACAAGGGTAACGCTTGAGTTCTGTCTCCAGTCCCATCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR TCA 90 bp | GATAATGGTTTTTGCACGGAGATCGTAGAGACCAAGAGGCTTGAGAAGCTCCGAAGGGTTCTGTTGAGTTaGCTTTCCTGTGGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DNGFCTEIVETKRLEKLRRVLLS*LSCGTS Trigger: GCTGGTGCCACAGGAAAGTCAACTCAACAGAACCCT...TCGGAGCTTCTCAAGCCTCTTGGTCTCTACGATCTCCGTGCAAAAACCATTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | TTAAAGACGCATCAATCCCAGGCACAGAGGAGACACACAATTATGGATGGGACTCAGTCCTGGGCTTGGTaGTTTTTCTTCCCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTHQSQAQRRHTIMDGTQSWAW*FFFPSQ Trigger: CTGGCTGGGGAAGAAAAATCACCAAGCCCAGGACTG...AGTCCCATCCATAATTGTGTGTCTCCTCTGTGCCTGGGATTGATGCGTCTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGTGGTAGCAGCCATCACACACCAGTCTTCCAATGCTGAGCATCCTGGCTGTCTCCCTTCGATCTaGTTTCCTCTGATTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEVVAAITHQSSNAEHPGCLPSI*FPLILK Trigger: TTTTAGAATCAGAGGAAATCAGATCGAAGGGAGACA...GCCAGGATGCTCAGCATTGGAAGACTGGTGTGTGATGGCTGCTACCACCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | GGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCAGGGGATGCTGTCTTCTTaGAATGTCTCAGAAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLETEAQGDAWETSNRQGMLSS*NVSEVK Trigger: CTTTACTTCTGAGACATTTCAAGAAGACAGCATCCC...CTGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR TCA 90 bp | AGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGAGACTTAATTTTTCATaGTTCTCCCAAAGCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLHTTGPLETEAQGDAWRLNFS*FSQSQS Trigger: TGACTGGCTTTGGGAGAATCATGAAAAATTAAGTCT...CCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACTTCTGAACCACAGATaGTCTTTTTCTGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRELTAHHRALRNRSTRRLLNHR*SFSVSL Trigger: CAAAGAAACAGAAAAAGAGCATCTGTGGTTCAGAAG...TCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CCA 90 bp | CCAAAGCTGCCTTCACACTCTCATAAGCCAGGCTGCCTTGAATTCAGAGGTCCTAACGTCAGTTTCATTTaGCTGCAGGGAAGTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKLPSHSHKPGCLEFRGPNVSFI*LQGSQS Trigger: GCTCTGACTTCCCTGCAGCCAAATGAAACTGACGTT...AGGACCTCTGAATTCAAGGCAGCCTGGCTTATGAGAGTGTGAAGGCAGCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR CCA 90 bp | CACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAGCTGCTTCAGTTGAATaGAATTTGTTTGTGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTTGPLETEAQGDAWETSAASVE*NLFVVP Trigger: TGGCACCACAAACAAATTCCATTCAACTGAAGCAGC...TGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CCA 90 bp | CATAAGCCAGGCTGCCTTGAATTCAGAGGTCCTCTTGCATCAGCATCCCAGGTAGAAGGATTTGCGTCTTaGGGGGCTAAGAGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKPGCLEFRGPLASASQVEGFAS*GAKSFF Trigger: AAAGAAGCTCTTAGCCCCCCAAGACGCAAATCCTTC...TACCTGGGATGCTGATGCAAGAGGACCTCTGAATTCAAGGCAGCCTGGCTTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR CCA 90 bp | CTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTATTTATTTAACTTGTaGTCTTCAGGGTGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTTGPLETEAQGDAWETYLFNL*SSGCTC Trigger: GCAGGTGCACCCTGAAGACCACAAGTTAAATAAATA...AGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| 3UTR CAA 72 bp | TTCTCTAGAAACTCCCACAGCACAGGGATGGCCATCTaGCCTGAGGTCCGATTGAGAAATATAGTCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: FSRNSHSTGMAI*PEVRLRNIVAM Trigger: CATCGCGACTATATTTCTCAATCGGACCTCAGGCAAGATGGCCATCCCTGTGCTGTGGGAGTTTCTAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS-3UTR TCA 90 bp | CATAAGCCAGGCTGCCTTGAATTCAGAGGTCCTCTTGCATCAGCATCCCAGGTAAACAAGATTAAAAGGTaGCCGAGGAGGGGTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: HKPGCLEFRGPLASASQVNKIKR*PRRGPF Trigger: AAATGGACCCCTCCTCGGTCACCTTTTAATCTTGTT...TACCTGGGATGCTGATGCAAGAGGACCTCTGAATTCAAGGCAGCCTGGCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGTCATGGTATTTATTTAACTTGTGGTCTTCAGGGTGCACCTGCTTCCGGGAGCTGCGCTCACTaGTTATCACCAGGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KASHGIYLTCGLQGAPASGSCAH*LSPGPF Trigger: GAAAGGACCTGGTGATAAGCAGTGAGCGCAGCTCCC...GGAAGCAGGTGCACCCTGAAGACCACAAGTTAAATAAATACCATGACTGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | AGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCACTTGATAATGGTTTTTaGACGGAGATCGTAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RALRNRSTRRRMGNFKQALDNGF*TEIVET Trigger: GGTCTCTACGATCTCCGTGCAAAAACCATTATCAAG...TGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAGGAGCTGTTATAAGCAGTTGTGAGCTGCCTGATGTGGGTGCTAAAAAGTTGTGGTCTTCAGGGTaGACCTGCTTCCATTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGAVISSCELPDVGAKKLWSSG*TCFHSL Trigger: CAATGAATGGAAGCAGGTGCACCCTGAAGACCACAA...CTTTTTAGCACCCACATCAGGCAGCTCACAACTGCTTATAACAGCTCCTGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR CCA 90 bp | GGGAGAATATATCTGACGCTTGACTCTTCTTCACTATACTCTCTATCTCAACCCGAAGCAGTGGGCTCTTaGAGAAGGGAGCTGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRIYLTLDSSSLYSLSQPEAVGS*RRELRS Trigger: TGAGCGCAGCTCCCTTCTCCAAGAGCCCACTGCTTC...GGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAAGCGTCAGATATATTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR CCA 90 bp | GGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCAGTCCTGCACTTTTGTTTaGTTTTCTGACTTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPLETEAQGDAWETSNRQSCTFV*FSDLQF Trigger: GAACTGCAAGTCAGAAAACCAAACAAAAGTGCAGGA...CTGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CCA 90 bp | ACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACGATGAGGAGCTTCCATaGGTCATGGAAAAGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTGPLETEAQGDAWETSNDEELP*VMEKYF Trigger: GAAATACTTTTCCATGACCCATGGAAGCTCCTCATC...GTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAAGAAGGTGACAGATCCCCAGGAGCTGTTATAAGCAGTTGTGAGCTGCCTGTGAACGTTTTGATCTaGACTTCAATCCTTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKEGDRSPGAVISSCELPVNVLI*TSILVG Trigger: GCCCACAAGGATTGAAGTTCAGATCAAAACGTTCAC...AGGCAGCTCACAACTGCTTATAACAGCTCCTGGGGATCTGTCACCTTCTTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR TCA 90 bp | CAGCAGCACCGGAGGGGCAGGAAGGTGCCGACTATTCTTGGTCAGTTTATAAAACTTGAGGTTCTGCTTTaGAACGTCAGTTTCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQHRRGRKVPTILGQFIKLEVLL*NVSFIW Trigger: CCAAATGAAACTGACGTTTCAAAGCAGAACCTCAAG...TTTTATAAACTGACCAAGAATAGTCGGCACCTTCCTGCCCCTCCGGTGCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR GCA 90 bp | ATATATCTGACGCTTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCCCTTGCACAGGCATCTaGAGGGCAGAGGGTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IYLTLDSSSLYSLSQPHPPCTGI*RAEGSV Trigger: AACAGAACCCTCTGCCCTGCAGATGCCTGTGCAAGG...GGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAAGCGTCAGATATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | ATGGGACTGGAGACAGAACTCAAGCGTTACCCTTGTTCCACCAATCTGTGCAGGTGTAAAACACCAGTATaGAAATGTGCCTCCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MGLETELKRYPCSTNLCRCKTPV*KCASPF Trigger: AAAGGGGGAGGCACATTTGCATACTGGTGTTTTACA...CCTGCACAGATTGGTGGAACAAGGGTAACGCTTGAGTTCTGTCTCCAGTCCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACTGCCATATTTACCAATaGCATGAAGCTCAATCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TTGPLETEAQGDAWETSNCHIYQ*HEAQSD Trigger: ATCCGATTGAGCTTCATGGCATTGGTAAATATGGCA...GTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGCACCGGAGGGGCAGGAAGGTGCCGACTATTCTTGGTCAGTTTATAAAATGTCTCCCTTCGATCTaGTTTCCTCTGATTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQHRRGRKVPTILGQFIKCLPSI*FPLILK Trigger: TTTTAGAATCAGAGGAAATCAGATCGAAGGGAGACA...TTTTATAAACTGACCAAGAATAGTCGGCACCTTCCTGCCCCTCCGGTGCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCAAGACTTAATTTTTCATaGTTCTCCCAAAGCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RALRNRSTRRRMGNFKQARLNFS*FSQSQS Trigger: TGACTGGCTTTGGGAGAATCATGAAAAATTAAGTCT...TGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAACTACATTTTAAAATAGTGTTAAGTAGCCAGGCAGTGGTGGCGCATGCCCTTGGAGAAGGGAGCTaGGCTCACTGCTTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FKLHFKIVLSSQAVVAHALGEGS*AHCLSP Trigger: TGGTGATAAGCAGTGAGCGCAGCTCCCTTCTCCAAG...GGCATGCGCCACCACTGCCTGGCTACTTAACACTATTTTAAAATGTAGTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR GCA 90 bp | ATATATCTGACGCTTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCCTTGGAGAAGGGAGCTaGGCTCACTGCTTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IYLTLDSSSLYSLSQPHPLGEGS*AHCLSP Trigger: TGGTGATAAGCAGTGAGCGCAGCTCCCTTCTCCAAG...GGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAAGCGTCAGATATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGTCATGGTATTTATTTAACTTGTGGTCTTCAGGGTGCACCTGCTTCCTCAGTTTCATTTGGCTaGAGGGAAGTCAGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KASHGIYLTCGLQGAPASSVSFG*REVRAA Trigger: GGCAGCTCTGACTTCCCTGCAGCCAAATGAAACTGA...GGAAGCAGGTGCACCCTGAAGACCACAAGTTAAATAAATACCATGACTGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | CCAAAAGAAGGTGACAGATCCCCAGGAGCTGTTATAAGCAGTTGTGAGCTGCCTCTTGATAATGGTTTTTaGACGGAGATCGTAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PKEGDRSPGAVISSCELPLDNGF*TEIVET Trigger: GGTCTCTACGATCTCCGTGCAAAAACCATTATCAAG...AGGCAGCTCACAACTGCTTATAACAGCTCCTGGGGATCTGTCACCTTCTTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| 3UTR CAA 72 bp | CTCATAAGCCAGGCTGCCTTGAATTCAGAGGTCCTCTaGCATCAGCATCCCAGGTACTGTGTATGTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LISQAALNSEVL*HQHPRYCVCIF Trigger: GAAAATACATACACAGTACCTGGGATGCTGATGCAAGAGGACCTCTGAATTCAAGGCAGCCTGGCTTATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR GCA 90 bp | AACCAAAGCTGCCTTCACACTCTCATAAGCCAGGCTGCCTTGAATTCAGAGGTCTGCCATATTTACCAATaGCATGAAGCTCAATCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NQSCLHTLISQAALNSEVCHIYQ*HEAQSD Trigger: ATCCGATTGAGCTTCATGGCATTGGTAAATATGGCA...GACCTCTGAATTCAAGGCAGCCTGGCTTATGAGAGTGTGAAGGCAGCTTTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGCACCGGAGGGGCAGGAAGGTGCCGACTATTCTTGGTCAGTTTATAAACTAACAGAATTTTCATaGACTGAGTACCTTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: AAAPEGQEGADYSWSVYKLTEFS*TEYLEM Trigger: CATTTCAAGGTACTCAGTGCATGAAAATTCTGTTAG...TTTATAAACTGACCAAGAATAGTCGGCACCTTCCTGCCCCTCCGGTGCTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR CCA 90 bp | CCAAAAGAAGGTGACAGATCCCCAGGAGCTGTTATAAGCAGTTGTGAGCTGCCTTCCTGCACTTTTGTTTaGTTTTCTGACTTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKEGDRSPGAVISSCELPSCTFV*FSDLQF Trigger: GAACTGCAAGTCAGAAAACCAAACAAAAGTGCAGGA...AGGCAGCTCACAACTGCTTATAACAGCTCCTGGGGATCTGTCACCTTCTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGGCCAACCTTCAGGAGTGTGTTCCAGGGATGGAATTCAGATCATCATGGCTGCTTCAGTTGAATaGAATTTGTTTGTGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRGQPSGVCSRDGIQIIMAASVE*NLFVVP Trigger: TGGCACCACAAACAAATTCCATTCAACTGAAGCAGC...CATGATGATCTGAATTCCATCCCTGGAACACACTCCTGAAGGTTGGCCTCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR TCA 90 bp | TTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCGGCACGAAATACAGTGAACGTTTTGATCTaGACTTCAATCCTTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLLHYTLYLNPIPARNTVNVLI*TSILVG Trigger: GCCCACAAGGATTGAAGTTCAGATCAAAACGTTCAC...TGTATTTCGTGCCGGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGGCCAACCTTCAGGAGTGTGTTCCAGGGATGGAATTCAGATCATCATGTCCCAAAGCCAGTCATaGTATTTATTTAACTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRGQPSGVCSRDGIQIIMSQSQS*YLFNLW Trigger: CCACAAGTTAAATAAATACCATGACTGGCTTTGGGA...CATGATGATCTGAATTCCATCCCTGGAACACACTCCTGAAGGTTGGCCTCTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR TCA 90 bp | ATATATCTGACGCTTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCACCTGCTGCTTCAGTTaGATGGAATTTGTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYLTLDSSSLYSLSQPHPTCCFS*MEFVCG Trigger: ACCACAAACAAATTCCATTCAACTGAAGCAGCAGGT...GGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAAGCGTCAGATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | ACATTGAGGAATTCTTATCCATTTCCTAGGTATATGTGGCCATCTGTTAAAGACTCAGTTTCATTTGGCTaGAGGGAAGTCAGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLRNSYPFPRYMWPSVKDSVSFG*REVRAA Trigger: GGCAGCTCTGACTTCCCTGCAGCCAAATGAAACTGA...GTCTTTAACAGATGGCCACATATACCTAGGAAATGGATAAGAATTCCTCAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR CCA 90 bp | TTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCGGCACGAAATACATCCTGCACTTTTGTTTaGTTTTCTGACTTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLLHYTLYLNPIPARNTSCTFV*FSDLQF Trigger: GAACTGCAAGTCAGAAAACCAAACAAAAGTGCAGGA...TGTATTTCGTGCCGGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| 3UTR CAA 72 bp | CTGCTCAGATCTTTTTATCTATTATTCACTGAGGCATaGTATAGACAAGTCTGCCAAGCCCAGGACTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRSFYLLFTEA*YRQVCQAQDSC Trigger: ACAAGAGTCCTGGGCTTGGCAGACTTGTCTATACAATGCCTCAGTGAATAATAGATAAAAAGATCTGAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGTCATGGTATTTATTTAACTTGTGGTCTTCAGGGTGCACCTGCTTCCCTTCTGAACCACAGATaGTCTTTTTCTGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KASHGIYLTCGLQGAPASLLNHR*SFSVSL Trigger: CAAAGAAACAGAAAAAGAGCATCTGTGGTTCAGAAG...GGAAGCAGGTGCACCCTGAAGACCACAAGTTAAATAAATACCATGACTGGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | GGGAGAATATATCTGACGCTTGACTCTTCTTCACTATACTCTCTATCTCAACCCCTTCTGAACCACAGATaGTCTTTTTCTGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRIYLTLDSSSLYSLSQPLLNHR*SFSVSL Trigger: CAAAGAAACAGAAAAAGAGCATCTGTGGTTCAGAAG...GGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAAGCGTCAGATATATTCTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR GCA 90 bp | TTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCGGCACGAAATACACTAACAGAATTTTCATaGACTGAGTACCTTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LTLLHYTLYLNPIPARNTLTEFS*TEYLEM Trigger: CATTTCAAGGTACTCAGTGCATGAAAATTCTGTTAG...TGTATTTCGTGCCGGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| 3UTR CAA 72 bp | TTTCATCACATATACATTATAAGGCCCATCTGCTCATaGTCTGTGTGTGTGCCACTAGTGGATCTTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FHHIYIIRPICS*SVCVPLVDLLV Trigger: AACCAAAAGATCCACTAGTGGCACACACACAGACAATGAGCAGATGGGCCTTATAATGTATATGTGATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| 3UTR CAA 72 bp | ATTCTTCTCAGAAAAATCTCCCTTACGGTCTTAGAATaGCTGCCAAAAGAGAAGATAGCAAGTGTGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLRKISLTVLE*LPKEKIASVES Trigger: GCTTTCCACACTTGCTATCTTCTCTTTTGGCAGCAATTCTAAGACCGTAAGGGAGATTTTTCTGAGAAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR CCA 90 bp | ACATTGAGGAATTCTTATCCATTTCCTAGGTATATGTGGCCATCTGTTAAAGACGCTGCTTCAGTTGAATaGAATTTGTTTGTGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLRNSYPFPRYMWPSVKDAASVE*NLFVVP Trigger: TGGCACCACAAACAAATTCCATTCAACTGAAGCAGC...GTCTTTAACAGATGGCCACATATACCTAGGAAATGGATAAGAATTCCTCAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR TCA 90 bp | ACAATCACATTATGGCTCATAACCATCTGTACAGTTACAGTGTACTCATATACACTTGAGGTTCTGCTTTaGAACGTCAGTTTCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TITLWLITICTVTVYSYTLEVLL*NVSFIW Trigger: CCAAATGAAACTGACGTTTCAAAGCAGAACCTCAAG...TGTATATGAGTACACTGTAACTGTACAGATGGTTATGAGCCATAATGTGATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR CCA 90 bp | ACAATCACATTATGGCTCATAACCATCTGTACAGTTACAGTGTACTCATATACACTTTGTTGTACTTGCTaGAAAAATACAGGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TITLWLITICTVTVYSYTLCCTC*KNTGLF Trigger: AAACAAGCCTGTATTTTTCCAGCAAGTACAACAAAG...TGTATATGAGTACACTGTAACTGTACAGATGGTTATGAGCCATAATGTGATTGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS TCA 90 bp | CAACAGTCTCCCTTGCACAGGCATCTGCAGGGCAGAGGGTTCTGTTaGGTTGACTTTCCTGTGGCACCAGCTCGCGATCAGCACCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: QQSPLHRHLQGRGFC*VDFPVAPARDQHPP Trigger: AGGTGGGTGCTGATCGCGAGCTGGTGCCACAGGAAAGTCAACTCAACAGAACCCTCTGCCCTGCAGATGCCTGTGCAAGGGAGACTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | GGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCAGAAGTAAAGTGTTTCTaGGCTTGTGAGCAGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSLHTTGPLETEAQGDAEVKCF*ACEQLG Trigger: GCCCAGCTGCTCACAAGCCAAGAAACACTTTACTTC...TGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 ENSMUST00000203643.2 |
||
| CDS GCA 90 bp | TTCCATCTTCTCCCACTCCTCCCAGTCCAACAGCAATATCTTCCTTaGAGCGATCCCAAGGCGGGTCTGGAACTAGGCTCTCTCCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: FHLLPLLPVQQQYLP*SDPKAGLELGSLHG Trigger: TCCGTGGAGAGAGCCTAGTTCCAGACCCGCCTTGGGATCGCTGCAAGGAAGATATTGCTGTTGGACTGGGAGGAGTGGGAGAAGATGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCAAAACGTCAGTTTCATTaGGCTGCAGGGAAGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSLHTTGPLETEAQGDAKRQFH*AAGKSE Trigger: CTCTGACTTCCCTGCAGCCAAATGAAACTGACGTTT...TGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGTGGTAGCAGCCATCACACACCAGTCTTCCAATGCTGAGCATCCTGGCGAGGGTTCTGTTGAGTaGACTTTCCTGTGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GEVVAAITHQSSNAEHPGEGSVE*TFLWHQ Trigger: CTGGTGCCACAGGAAAGTCAACTCAACAGAACCCTC...GCCAGGATGCTCAGCATTGGAAGACTGGTGTGTGATGGCTGCTACCACCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | AAATCCACGTGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGTAAAGTGTTTCTaGGCTTGTGAGCAGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSTCREGSSLHTTGPLETEVKCF*ACEQLG Trigger: GCCCAGCTGCTCACAAGCCAAGAAACACTTTACTTC...GGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCACGTGGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 ENSMUST00000203643.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCAGGAGGGTTCTGTTGAGTaGACTTTCCTGTGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPLETEAQGDAWETSNRQEGSVE*TFLWHQ Trigger: CTGGTGCCACAGGAAAGTCAACTCAACAGAACCCTC...CTGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | GGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCAGGATCCAGTCCTGGGCTaGGTGATTTTTCTTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPLETEAQGDAWETSNRQDPVLG*VIFLPQ Trigger: CTGGGGAAGAAAAATCACCAAGCCCAGGACTGGATC...CTGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | GGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCACACCTGCTGCTTCAGTaGAATGGAATTTGTTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSLHTTGPLETEAQGDAHLLLQ*NGICLW Trigger: CCACAAACAAATTCCATTCAACTGAAGCAGCAGGTG...TGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGATTGCCTGAGGTCCGATaGAGAAATATAGTCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: GRELTAHHRALRNRSTRRLPEVR*RNIVAM Trigger: CATCGCGACTATATTTCTCAATCGGACCTCAGGCAA...TCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGAGGGTTCTGTTGAGTaGACTTTCCTGTGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRALRNRSTRRRMGNFKQEGSVE*TFLWHQ Trigger: CTGGTGCCACAGGAAAGTCAACTCAACAGAACCCTC...CTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | CGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGATACCTCCACTGCTTaGTCAGATATTCATCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: REGSSLHTTGPLETEAQGDTSTA*SDIHLR Trigger: TCTCAGATGAATATCTGACAAAGCAGTGGAGGTATC...GCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS CCA 90 bp | AACCTTTGCTTCACAACTCTTTCCCATCCACACGGGACAGGCTTGTaGCCTTCTGTCGCTGTAGTACTAGACAGAGTAGAAGCAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NLCFTTLSHPHGTGL*PSVAVVLDRVEAVG Trigger: GCCCACTGCTTCTACTCTGTCTAGTACTACAGCGACAGAAGGCCACAAGCCTGTCCCGTGTGGATGGGAAAGAGTTGTGAAGCAAAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | TGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAACTCTTCCTGCACTTTaGTTTGGTTTTCTGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CREGSSLHTTGPLETEAQTLPAL*FGFLTC Trigger: GCAAGTCAGAAAACCAAACAAAAGTGCAGGAAGAGT...TTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGATGGTATTTATTTAACTaGTGGTCTTCAGGGTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GRELTAHHRALRNRSTRRWYLFN*WSSGCT Trigger: GGTGCACCCTGAAGACCACAAGTTAAATAAATACCA...TCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR CAA 90 bp | CCAAAGCTGCCTTCACACTCTCATAAGCCAGGCTGCCTTGAATTCAGAGGTCCTGAAGTAAAGTGTTTCTaGGCTTGTGAGCAGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PKLPSHSHKPGCLEFRGPEVKCF*ACEQLG Trigger: GCCCAGCTGCTCACAAGCCAAGAAACACTTTACTTC...AGGACCTCTGAATTCAAGGCAGCCTGGCTTATGAGAGTGTGAAGGCAGCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR CAA 90 bp | ATCCACGTGCCGGGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGACTAAGAGCTTCTTTGTaGTACTTGCTGGAAAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: IHVPGRELTAHHRALRNRLRASL*YLLEKY Trigger: GTATTTTTCCAGCAAGTACAACAAAGAAGCTCTTAG...TCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCCCGGCACGTGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS GCA 90 bp | TGTGAGCAGCTGGGCATTTCAGAGCCATCCTGTAAAACACCAGTATaGAAATGTGCCTCCCCCTTTCTGTCTCCCTTCGATCTGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CEQLGISEPSCKTPV*KCASPFLSPFDLIS Trigger: GGAAATCAGATCGAAGGGAGACAGAAAGGGGGAGGCACATTTGCATACTGGTGTTTTACAGGATGGCTCTGAAATGCCCAGCTGCTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGAGCTCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGATTGAATGGAATTTGTTaGTGGTGCCAGAAGTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: GRELTAHHRALRNRSTRRLNGIC*WCQKLL Trigger: AAGTAACTTCTGGCACCACAAACAAATTCCATTCAA...TCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGAGCTCCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | AGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCACACCTGCTGCTTCAGTaGAATGGAATTTGTTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RALRNRSTRRRMGNFKQAHLLLQ*NGICLW Trigger: CCACAAACAAATTCCATTCAACTGAAGCAGCAGGTG...TGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | CACTCTCATAAGCCAGGCTGCCTTGAATTCAGAGGTCCTCTTGCATCAGCATCCTTGCCTGAGGTCCGATaGAGAAATATAGTCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: HSHKPGCLEFRGPLASASLPEVR*RNIVAM Trigger: CATCGCGACTATATTTCTCAATCGGACCTCAGGCAA...GGATGCTGATGCAAGAGGACCTCTGAATTCAAGGCAGCCTGGCTTATGAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
||
| CDS-3UTR CAA 90 bp | TCACTGCACACCACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAACATGCACTGAGTACCTaGAAATGTCTCAGAAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLHTTGPLETEAQGDAWEHALST*KCLRSK Trigger: TTTACTTCTGAGACATTTCAAGGTACTCAGTGCATG...TTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTGGTGTGCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147282.4 |
||
| CDS TCA 90 bp | CACTGGGCAGAGGCAACACATCTGTTTTCCACTTGCTTCGTGTCTTaGGGTTCTGCTTTGAAACGTCAGTTTCATTTGGCTGCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HWAEATHLFSTCFVS*GSALKRQFHLAAGK Trigger: CTTCCCTGCAGCCAAATGAAACTGACGTTTCAAAGCAGAACCTCAAGACACGAAGCAAGTGGAAAACAGATGTGTTGCCTCTGCCCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | GGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGCAGTCTGAACTTCAATCCTaGTGGGCTGATAAAGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: GPLETEAQGDAWETSNRQSELQS*WADKVY Trigger: GTATACTTTATCAGCCCACAAGGATTGAAGTTCAGA...CTGCCTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGTGGTAGCAGCCATCACACACCAGTCTTCCAATGCTGAGCATCCTGGCTTGAATGGAATTTGTTaGTGGTGCCAGAAGTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: GEVVAAITHQSSNAEHPGLNGIC*WCQKLL Trigger: AAGTAACTTCTGGCACCACAAACAAATTCCATTCAA...GCCAGGATGCTCAGCATTGGAAGACTGGTGTGTGATGGCTGCTACCACCTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS-3UTR CAA 90 bp | CACAGGGCCCTTAGAAACCGAAGCACAAGGCGACGCATGGGAAACTTCAAACAGGATACCTCCACTGCTTaGTCAGATATTCATCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HRALRNRSTRRRMGNFKQDTSTA*SDIHLR Trigger: TCTCAGATGAATATCTGACAAAGCAGTGGAGGTATC...CTGTTTGAAGTTTCCCATGCGTCGCCTTGTGCTTCGGTTTCTAAGGGCCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000203643.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCAGCACCGGAGGGGCAGGAAGGTGCCGACTATTCTTGGTCAGTTTATAAATCTGAACTTCAATCCTaGTGGGCTGATAAAGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: AAAPEGQEGADYSWSVYKSELQS*WADKVY Trigger: GTATACTTTATCAGCCCACAAGGATTGAAGTTCAGA...TTTATAAACTGACCAAGAATAGTCGGCACCTTCCTGCCCCTCCGGTGCTGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
||
| CDS-3UTR CAA 90 bp | TTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCGGCACGAAATACAGATCCAGTCCTGGGCTaGGTGATTTTTCTTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTLLHYTLYLNPIPARNTDPVLG*VIFLPQ Trigger: CTGGGGAAGAAAAATCACCAAGCCCAGGACTGGATC...TGTATTTCGTGCCGGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
||
| CDS TCA 90 bp | CAACACATCTGTTTTCCACTTGCTTCGTGTCTTGAGGTTCTGCTTTaGAACGTCAGTTTCATTTGGCTGCAGGGAAGTCAGAGCTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QHICFPLASCLEVLL*NVSFIWLQGSQSCQ Trigger: TTGGCAGCTCTGACTTCCCTGCAGCCAAATGAAACTGACGTTTCAAAGCAGAACCTCAAGACACGAAGCAAGTGGAAAACAGATGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS GCA 90 bp | AGAGGCAACACATCTGTTTTCCACTTGCTTCGTGTCTTGAGGTTCTaGTTTGAAACGTCAGTTTCATTTGGCTGCAGGGAAGTCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: RGNTSVFHLLRVLRF*FETSVSFGCREVRA Trigger: AGCTCTGACTTCCCTGCAGCCAAATGAAACTGACGTTTCAAAGCAGAACCTCAAGACACGAAGCAAGTGGAAAACAGATGTGTTGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS-3UTR CAA 90 bp | ATGGGACTGGAGACAGAACTCAAGCGTTACCCTTGTTCCACCAATCTGTGCAGGGTTTGGTTTTCTGACTaGCAGTTCCTTTCAAAACAG | + |
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Preference number: 5 (lower is better) Translates to: MGLETELKRYPCSTNLCRVWFSD*QFLSKQ Trigger: CTGTTTTGAAAGGAACTGCAAGTCAGAAAACCAAAC...CCTGCACAGATTGGTGGAACAAGGGTAACGCTTGAGTTCTGTCTCCAGTCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| CDS-3UTR CAA 90 bp | CCAAAGCTGCCTTCACACTCTCATAAGCCAGGCTGCCTTGAATTCAGAGGTCCTGCTTCTTTGTTGTACTaGCTGGAAAAATACAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: PKLPSHSHKPGCLEFRGPASLLY*LEKYRL Trigger: AAGCCTGTATTTTTCCAGCAAGTACAACAAAGAAGC...AGGACCTCTGAATTCAAGGCAGCCTGGCTTATGAGAGTGTGAAGGCAGCTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| CDS-3UTR CAA 90 bp | ATATATCTGACGCTTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCGAAGTAAAGTGTTTCTaGGCTTGTGAGCAGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: IYLTLDSSSLYSLSQPHPEVKCF*ACEQLG Trigger: GCCCAGCTGCTCACAAGCCAAGAAACACTTTACTTC...GGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAAGCGTCAGATATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS TCA 90 bp | GTCACCTTTCTTTTGGACTTTCTCCTCTTCTCAGAGTCAACATCCTaGATGTCCCTATGTTCTCTCAATAGCAAGCAAGCCGAGTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: VTFLLDFLLFSESTS*MSLCSLNSKQAELE Trigger: CTCTAACTCGGCTTGCTTGCTATTGAGAGAACATAGGGACATTCAGGATGTTGACTCTGAGAAGAGGAGAAAGTCCAAAAGAAAGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS-3UTR CAA 90 bp | ATATATCTGACGCTTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCAAACGTCAGTTTCATTaGGCTGCAGGGAAGTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: IYLTLDSSSLYSLSQPHPKRQFH*AAGKSE Trigger: CTCTGACTTCCCTGCAGCCAAATGAAACTGACGTTT...GGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAAGCGTCAGATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS-3UTR CAA 90 bp | ATTCCATTAAACAAGACAGACAGACACTTCTGCAGACATAGCTTATTTAGTCCAGATCCAGTCCTGGGCTaGGTGATTTTTCTTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: IPLNKTDRHFCRHSLFSPDPVLG*VIFLPQ Trigger: CTGGGGAAGAAAAATCACCAAGCCCAGGACTGGATC...TGGACTAAATAAGCTATGTCTGCAGAAGTGTCTGTCTGTCTTGTTTAATGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| CDS-3UTR CAA 90 bp | GGGAGAATATATCTGACGCTTGACTCTTCTTCACTATACTCTCTATCTCAACCCCACCTGCTGCTTCAGTaGAATGGAATTTGTTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: GRIYLTLDSSSLYSLSQPHLLLQ*NGICLW Trigger: CCACAAACAAATTCCATTCAACTGAAGCAGCAGGTG...GGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAAGCGTCAGATATATTCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS-3UTR CAA 90 bp | TCCAGACTCCCAAGTGTTAGGATTATAGTAGTATACCATGATGACTGGCATGGGGGGCTAAGAGCTTCTTaGTTGTACTTGCTGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SRLPSVRIIVVYHDDWHGGLRAS*LYLLEK Trigger: TTTTTCCAGCAAGTACAACAAAGAAGCTCTTAGCCC...CCCATGCCAGTCATCATGGTATACTACTATAATCCTAACACTTGGGAGTCTGGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| CDS-3UTR CAA 90 bp | TTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCGGCACGAAATACATCTGAACTTCAATCCTaGTGGGCTGATAAAGTATAC | + |
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Preference number: 5 (lower is better) Translates to: LTLLHYTLYLNPIPARNTSELQS*WADKVY Trigger: GTATACTTTATCAGCCCACAAGGATTGAAGTTCAGA...TGTATTTCGTGCCGGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS-3UTR CAA 90 bp | TCCAGACTCCCAAGTGTTAGGATTATAGTAGTATACCATGATGACTGGCATGGGGTTTGGTTTTCTGACTaGCAGTTCCTTTCAAAACAG | + |
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Preference number: 5 (lower is better) Translates to: SRLPSVRIIVVYHDDWHGVWFSD*QFLSKQ Trigger: CTGTTTTGAAAGGAACTGCAAGTCAGAAAACCAAAC...CCCATGCCAGTCATCATGGTATACTACTATAATCCTAACACTTGGGAGTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| CDS-3UTR CAA 90 bp | GGGAGAATATATCTGACGCTTGACTCTTCTTCACTATACTCTCTATCTCAACCCACTCTTCCTGCACTTTaGTTTGGTTTTCTGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: GRIYLTLDSSSLYSLSQPTLPAL*FGFLTC Trigger: GCAAGTCAGAAAACCAAACAAAAGTGCAGGAAGAGT...GGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAAGCGTCAGATATATTCTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS-3UTR CAA 90 bp | TTCAGAGGTCCTCTTGCATCAGCATCCCAGGTACTGTGTATGTATTTTCATCACTGGGATGCTGTCTTCTaGAAATGTCTCAGAAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: FRGPLASASQVLCMYFHHWDAVF*KCLRSK Trigger: TTTACTTCTGAGACATTTCAAGAAGACAGCATCCCA...GTGATGAAAATACATACACAGTACCTGGGATGCTGATGCAAGAGGACCTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| CDS-3UTR CAA 90 bp | CTATTATTCACTGAGGCATTGTATAGACAAGTCTGCCAAGCCCAGGACTCTTGTCATGCACTGAGTACCTaGAAATGTCTCAGAAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LLFTEALYRQVCQAQDSCHALST*KCLRSK Trigger: TTTACTTCTGAGACATTTCAAGGTACTCAGTGCATG...ACAAGAGTCCTGGGCTTGGCAGACTTGTCTATACAATGCCTCAGTGAATAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| CDS-3UTR CAA 90 bp | ATATATCTGACGCTTGACTCTTCTTCACTATACTCTCTATCTCAACCCCATCCCGTTTGGTTTTCTGACTaGCAGTTCCTTTCAAAACAG | + |
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Preference number: 5 (lower is better) Translates to: IYLTLDSSSLYSLSQPHPVWFSD*QFLSKQ Trigger: CTGTTTTGAAAGGAACTGCAAGTCAGAAAACCAAAC...GGGATGGGGTTGAGATAGAGAGTATAGTGAAGAAGAGTCAAGCGTCAGATATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS-3UTR CAA 90 bp | ACATTGAGGAATTCTTATCCATTTCCTAGGTATATGTGGCCATCTGTTAAAGACACTCTTCCTGCACTTTaGTTTGGTTTTCTGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: TLRNSYPFPRYMWPSVKDTLPAL*FGFLTC Trigger: GCAAGTCAGAAAACCAAACAAAAGTGCAGGAAGAGT...GTCTTTAACAGATGGCCACATATACCTAGGAAATGGATAAGAATTCCTCAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122816.3 |
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| CDS-3UTR CAA 90 bp | ACAATCACATTATGGCTCATAACCATCTGTACAGTTACAGTGTACTCATATACATGGTATTTATTTAACTaGTGGTCTTCAGGGTGCACC | + |
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Preference number: 5 (lower is better) Translates to: TITLWLITICTVTVYSYTWYLFN*WSSGCT Trigger: GGTGCACCCTGAAGACCACAAGTTAAATAAATACCA...TGTATATGAGTACACTGTAACTGTACAGATGGTTATGAGCCATAATGTGATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| CDS-3UTR CAA 90 bp | ATATCACTTTATACAGAAGGAGAATACATGTTTAGGCTTTCTTTAGCAGGAGTGTTGAATGGAATTTGTTaGTGGTGCCAGAAGTTACTT | + |
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Preference number: 5 (lower is better) Translates to: ISLYTEGEYMFRLSLAGVLNGIC*WCQKLL Trigger: AAGTAACTTCTGGCACCACAAACAAATTCCATTCAA...CACTCCTGCTAAAGAAAGCCTAAACATGTATTCTCCTTCTGTATAAAGTGATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032469.13 |
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| CDS CAA 90 bp | AGTCTCCCTTGCACAGGCATCTGCAGGGCAGAGGGTTCTGTTGAGTaGACTTTCCTGTGGCACCAGCTCGCGATCAGCACCCACCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SLPCTGICRAEGSVE*TFLWHQLAISTHLL Trigger: CAGAAGGTGGGTGCTGATCGCGAGCTGGTGCCACAGGAAAGTCAACTCAACAGAACCCTCTGCCCTGCAGATGCCTGTGCAAGGGAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS TCA 72 bp | CCCTTGCACAGGCATCTGCAGGGCAGAGGGTTCTGTTaGGTTGACTTTCCTGTGGCACCAGCTCGCGATCAG | + |
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Preference number: 6 (lower is better) Translates to: PLHRHLQGRGFC*VDFPVAPARDQ Trigger: CTGATCGCGAGCTGGTGCCACAGGAAAGTCAACTCAACAGAACCCTCTGCCCTGCAGATGCCTGTGCAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS CAA 72 bp | TGCACAGGCATCTGCAGGGCAGAGGGTTCTGTTGAGTaGACTTTCCTGTGGCACCAGCTCGCGATCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: CTGICRAEGSVE*TFLWHQLAIST Trigger: GGTGCTGATCGCGAGCTGGTGCCACAGGAAAGTCAACTCAACAGAACCCTCTGCCCTGCAGATGCCTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS GCA 72 bp | CTCCCACTCCTCCCAGTCCAACAGCAATATCTTCCTTaGAGCGATCCCAAGGCGGGTCTGGAACTAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LPLLPVQQQYLP*SDPKAGLELGS Trigger: AGAGCCTAGTTCCAGACCCGCCTTGGGATCGCTGCAAGGAAGATATTGCTGTTGGACTGGGAGGAGTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 |
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| CDS CAA 72 bp | TCTCCCACTCCTCCCAGTCCAACAGCAATATCTTCCTaGCAGCGATCCCAAGGCGGGTCTGGAACTAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SPTPPSPTAISS*QRSQGGSGTRL Trigger: GAGCCTAGTTCCAGACCCGCCTTGGGATCGCTGCAAGGAAGATATTGCTGTTGGACTGGGAGGAGTGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 |
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| CDS CCA 72 bp | GCTGTAGTACTAGACAGAGTAGAAGCAGTGGGCTCTTaGAGAAGGGAGCTGCGCTCACTGCTTATCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: AVVLDRVEAVGS*RRELRSLLITR Trigger: CCTGGTGATAAGCAGTGAGCGCAGCTCCCTTCTCCAAGAGCCCACTGCTTCTACTCTGTCTAGTACTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS CAA 72 bp | TGCTTCACAACTCTTTCCCATCCACACGGGACAGGCTaGTGGCCTTCTGTCGCTGTAGTACTAGACAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: CFTTLSHPHGTG*WPSVAVVLDRV Trigger: TACTCTGTCTAGTACTACAGCGACAGAAGGCCACAAGCCTGTCCCGTGTGGATGGGAAAGAGTTGTGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS CAA 90 bp | GATAACCTTTGCTTCACAACTCTTTCCCATCCACACGGGACAGGCTaGTGGCCTTCTGTCGCTGTAGTACTAGACAGAGTAGAAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: DNLCFTTLSHPHGTG*WPSVAVVLDRVEAV Trigger: CACTGCTTCTACTCTGTCTAGTACTACAGCGACAGAAGGCCACAAGCCTGTCCCGTGTGGATGGGAAAGAGTTGTGAAGCAAAGGTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS CCA 72 bp | TTCACAACTCTTTCCCATCCACACGGGACAGGCTTGTaGCCTTCTGTCGCTGTAGTACTAGACAGAGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: FTTLSHPHGTGL*PSVAVVLDRVE Trigger: TTCTACTCTGTCTAGTACTACAGCGACAGAAGGCCACAAGCCTGTCCCGTGTGGATGGGAAAGAGTTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS CAA 90 bp | CCACTGGGCAGAGGCAACACATCTGTTTTCCACTTGCTTCGTGTCTaGAGGTTCTGCTTTGAAACGTCAGTTTCATTTGGCTGCAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PLGRGNTSVFHLLRV*RFCFETSVSFGCRE Trigger: TTCCCTGCAGCCAAATGAAACTGACGTTTCAAAGCAGAACCTCAAGACACGAAGCAAGTGGAAAACAGATGTGTTGCCTCTGCCCAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS TCA 72 bp | TACTTGTATGAAACAAAGATCCAGTCCTGGGCTTGGTaGTTTTTCTTCCCCAGCCAGGCCAACAGTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: YLYETKIQSWAW*FFFPSQANSLP Trigger: AGGGAGACTGTTGGCCTGGCTGGGGAAGAAAAATCACCAAGCCCAGGACTGGATCTTTGTTTCATACAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS GCA 72 bp | AACGTCAGTTTCATTTGGCTGCAGGGAAGTCAGAGCTaGCAAACTTTGGTGTTTATAACCGGGATTGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: NVSFIWLQGSQS*QTLVFITGIDA Trigger: AGCATCAATCCCGGTTATAAACACCAAAGTTTGGCAGCTCTGACTTCCCTGCAGCCAAATGAAACTGACGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS TCA 72 bp | GAGGCAACACATCTGTTTTCCACTTGCTTCGTGTCTTaGGGTTCTGCTTTGAAACGTCAGTTTCATTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EATHLFSTCFVS*GSALKRQFHLA Trigger: AGCCAAATGAAACTGACGTTTCAAAGCAGAACCTCAAGACACGAAGCAAGTGGAAAACAGATGTGTTGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS TCA 72 bp | CTTTTGGACTTTCTCCTCTTCTCAGAGTCAACATCCTaGATGTCCCTATGTTCTCTCAATAGCAAGCAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLDFLLFSESTS*MSLCSLNSKQA Trigger: GGCTTGCTTGCTATTGAGAGAACATAGGGACATTCAGGATGTTGACTCTGAGAAGAGGAGAAAGTCCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS TCA 72 bp | AGTCTGCTCACGATTTGCTTCACCTGCTGCTTCAGTTaGATGGAATTTGTTTGTGGTGCCAGAAGTTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLTICFTCCFS*MEFVCGARSYL Trigger: CAAGTAACTTCTGGCACCACAAACAAATTCCATTCAACTGAAGCAGCAGGTGAAGCAAATCGTGAGCAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS GCA 72 bp | ACATCTGTTTTCCACTTGCTTCGTGTCTTGAGGTTCTaGTTTGAAACGTCAGTTTCATTTGGCTGCAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TSVFHLLRVLRF*FETSVSFGCRE Trigger: TTCCCTGCAGCCAAATGAAACTGACGTTTCAAAGCAGAACCTCAAGACACGAAGCAAGTGGAAAACAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS CAA 72 bp | AGAGGCAACACATCTGTTTTCCACTTGCTTCGTGTCTaGAGGTTCTGCTTTGAAACGTCAGTTTCATTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGNTSVFHLLRV*RFCFETSVSFG Trigger: GCCAAATGAAACTGACGTTTCAAAGCAGAACCTCAAGACACGAAGCAAGTGGAAAACAGATGTGTTGCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS CAA 72 bp | AAGTCTGCTCACGATTTGCTTCACCTGCTGCTTCAGTaGAATGGAATTTGTTTGTGGTGCCAGAAGTTACTT | + |
|
Preference number: 6 (lower is better) Translates to: KSAHDLLHLLLQ*NGICLWCQKLL Trigger: AAGTAACTTCTGGCACCACAAACAAATTCCATTCAACTGAAGCAGCAGGTGAAGCAAATCGTGAGCAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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| CDS CAA 72 bp | CGATTTGCTTCACCTGCTGCTTCAGTTGAATGGAATTaGTTTGTGGTGCCAGAAGTTACTTGTATGAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: RFASPAASVEWN*FVVPEVTCMKQ Trigger: TTGTTTCATACAAGTAACTTCTGGCACCACAAACAAATTCCATTCAACTGAAGCAGCAGGTGAAGCAAATCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032469.13 ENSMUST00000122816.3 ENSMUST00000147282.4 |
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