Pregenerated sensors for MBD3L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047508Ensembl transcript IDs: ENSMUST00000051008.9, ENSMUST00000213777.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTATGGGGTTCTTGCCTGTAATCATGACATTCATCAGGCTATACTaGGGGGATCAAATTCAAGGCCCACCTGACACACAAAGTGAGATA | + |
|
Preference number: 1 (lower is better) Translates to: GMGFLPVIMTFIRLY*GDQIQGPPDTQSEI Trigger: TATCTCACTTTGTGTGTCAGGTGGGCCTTGAATTTGATCCCCCCAGTATAGCCTGATGAATGTCATGATTACAGGCAAGAACCCCATACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR GCA 90 bp | GAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTaGTTAGCCGGAGTTAAGCTTTTGGAACTATCTAGTAGGTTTCAC | + |
|
Preference number: 1 (lower is better) Translates to: ESNRNLNSRSQGHKT*LAGVKLLELSSRFH Trigger: GTGAAACCTACTAGATAGTTCCAAAAGCTTAACTCCGGCTAAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR TCA 90 bp | AGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACATaGATTCTCTTACATAACATTTCGATCCAAACTGGAAACACCATT | + |
|
Preference number: 1 (lower is better) Translates to: RFLLWITTHQKDVST*ILLHNISIQTGNTI Trigger: AATGGTGTTTCCAGTTTGGATCGAAATGTTATGTAAGAGAATTCATGTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCTATCCCAGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACCTCTGGAGGCAGAGATaGGGTTCTAGGACAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: NLSQIPTVDHNSPKGCFHLWRQR*GSRTTR Trigger: CCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAG...GTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGGATAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR-3UTR CCA 90 bp | CAATTGGGTATGGGGTTCTTGCCTGTAATCATGACATTCATCAGGCTATACTGGCCCAGATTCCTACTGTaGATCACAACTCACCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QLGMGFLPVIMTFIRLYWPRFLL*ITTHQK Trigger: CTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGG...CCAGTATAGCCTGATGAATGTCATGATTACAGGCAAGAACCCCATACCCAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR-3UTR TCA 90 bp | CAATTGGGTATGGGGTTCTTGCCTGTAATCATGACATTCATCAGGCTATACTGGCTGGAAACCCTGTCTTaGAAAACCAAAACACCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QLGMGFLPVIMTFIRLYWLETLS*KTKTPK Trigger: TTTTGGTGTTTTGGTTTTTCAAGACAGGGTTTCCAG...CCAGTATAGCCTGATGAATGTCATGATTACAGGCAAGAACCCCATACCCAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTTCTGTAGGTTGCTGTTaGATCTATCCCAGATTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: GREQQKFKFKVSRPQDLLSVGCC*IYPRFL Trigger: TAGGAATCTGGGATAGATTCAACAGCAACCTACAGA...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTCTGGAAACCCTGTCTTaGAAAACCAAAACACCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GREQQKFKFKVSRPQDLLLETLS*KTKTPK Trigger: TTTTGGTGTTTTGGTTTTTCAAGACAGGGTTTCCAG...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTCCGGAGTTAAGCTTTTaGAACTATCTAGTAGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GREQQKFKFKVSRPQDLLPELSF*NYLVGF Trigger: GAAACCTACTAGATAGTTCCAAAAGCTTAACTCCGG...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR CCA 72 bp | TTCTTGCCTGTAATCATGACATTCATCAGGCTATACTaGGGGGATCAAATTCAAGGCCCACCTGACACACAA | + |
|
Preference number: 3 (lower is better) Translates to: FLPVIMTFIRLY*GDQIQGPPDTQ Trigger: TTGTGTGTCAGGTGGGCCTTGAATTTGATCCCCCCAGTATAGCCTGATGAATGTCATGATTACAGGCAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTTCTGGAAACCCTGTCTaGAAAAACCAAAACACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GREQQKFKFKVSRPQDLLSGNPV*KNQNTK Trigger: TTTGGTGTTTTGGTTTTTCAAGACAGGGTTTCCAGA...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR GCA 72 bp | AGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTaGTTAGCCGGAGTTAAGCTTTTGGAACTATCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RNLNSRSQGHKT*LAGVKLLELSS Trigger: ACTAGATAGTTCCAAAAGCTTAACTCCGGCTAAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| 3UTR TCA 72 bp | CTGTGGATCACAACTCACCAAAAGGATGTTTCCACATaGATTCTCTTACATAACATTTCGATCCAAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LWITTHQKDVST*ILLHNISIQTG Trigger: TCCAGTTTGGATCGAAATGTTATGTAAGAGAATTCATGTGGAAACATCCTTTTGGTGAGTTGTGATCCACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAACCCATGTTCTCTGCCTaGCTGGCAAGACTGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNSGGRDGVLGQPGLHLEPMFSA*LARLSA Trigger: GGCAGACAGTCTTGCCAGGCAGGCAGAGAACATGGG...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAACTCCCCCATGTTCTCTaGCTGCCTGGCAAGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNSGGRDGVLGQPGLHLELPHVL*LPGKTV Trigger: GACAGTCTTGCCAGGCAGGCAGAGAACATGGGGGAG...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAATGTTCTCTGCCTGCCTaGCAAGACTGTCTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNSGGRDGVLGQPGLHLECSLPA*QDCLPP Trigger: TGGAGGCAGACAGTCTTGCCAGGCAGGCAGAGAACA...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTCCCATGTTCTCTGCCTaGCTGGCAAGACTGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GREQQKFKFKVSRPQDLLPMFSA*LARLSA Trigger: GGCAGACAGTCTTGCCAGGCAGGCAGAGAACATGGG...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | CAATTGGGTATGGGGTTCTTGCCTGTAATCATGACATTCATCAGGCTATACTGGTGTTCTCTGCCTGCCTaGCAAGACTGTCTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLGMGFLPVIMTFIRLYWCSLPA*QDCLPP Trigger: TGGAGGCAGACAGTCTTGCCAGGCAGGCAGAGAACA...CCAGTATAGCCTGATGAATGTCATGATTACAGGCAAGAACCCCATACCCAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAATCCAAGCATGGGGTTTaGACAGAGGTAACTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNSGGRDGVLGQPGLHLESKHGV*TEVTSP Trigger: TGGAGAAGTTACCTCTGTCCAAACCCCATGCTTGGA...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAATGTGGTCACTGGCTTTaGAAAGATGCAACTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNSGGRDGVLGQPGLHLECGHWL*KDATGH Trigger: ATGACCAGTTGCATCTTTGCAAAGCCAGTGACCACA...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAAATCCCGCATTCCCAGTaGAATTCTTTCTACAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KNSGGRDGVLGQPGLHLEIPHSQ*NSFYRV Trigger: AACCCTGTAGAAAGAATTGCACTGGGAATGCGGGAT...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAATTGTTACCCCTGGACTaGAGAAAAATGGTGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNSGGRDGVLGQPGLHLELLPLD*RKMVTA Trigger: AGCTGTCACCATTTTTCTCCAGTCCAGGGGTAACAA...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAACTTCCAGTCTCTTCCTaGCTTTCTTTACCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNSGGRDGVLGQPGLHLELPVSS*LSLPSR Trigger: TCTGGAAGGTAAAGAAAGCCAGGAAGAGACTGGAAG...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR TCA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTTCTCCAGGAGTAAGCTaGCCCTTAACACCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GREQQKFKFKVSRPQDLLSPGVS*PLTPLW Trigger: CCAAAGTGGTGTTAAGGGTCAGCTTACTCCTGGAGA...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | CAATTGGGTATGGGGTTCTTGCCTGTAATCATGACATTCATCAGGCTATACTGGTCCAAGCATGGGGTTTaGACAGAGGTAACTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLGMGFLPVIMTFIRLYWSKHGV*TEVTSP Trigger: TGGAGAAGTTACCTCTGTCCAAACCCCATGCTTGGA...CCAGTATAGCCTGATGAATGTCATGATTACAGGCAAGAACCCCATACCCAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR GCA 90 bp | CAATTGGGTATGGGGTTCTTGCCTGTAATCATGACATTCATCAGGCTATACTGGTGTGGTCACTGGCTTTaGAAAGATGCAACTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLGMGFLPVIMTFIRLYWCGHWL*KDATGH Trigger: ATGACCAGTTGCATCTTTGCAAAGCCAGTGACCACA...CCAGTATAGCCTGATGAATGTCATGATTACAGGCAAGAACCCCATACCCAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGATCACAACTCACCAAAAGGATGTTTCCACATGAATTCTCTTACATAACACCTGGCAAGACTGTCTaGCTCCAAGGCTACTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGSQLTKRMFPHEFSYITPGKTV*LQGYFQ Trigger: CTGGAAGTAGCCTTGGAGGCAGACAGTCTTGCCAGG...TGTTATGTAAGAGAATTCATGTGGAAACATCCTTTTGGTGAGTTGTGATCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTCCTCTCTCCTGTACCTaGTTTCATTCTCAGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GREQQKFKFKVSRPQDLLPLSCT*FHSQGM Trigger: CATACCCTGAGAATGAAACCAGGTACAGGAGAGAGG...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | CAATTGGGTATGGGGTTCTTGCCTGTAATCATGACATTCATCAGGCTATACTGGCCCTTAACACCACTTTaGTCATTAGTTTCATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLGMGFLPVIMTFIRLYWPLTPL*SLVSSR Trigger: GCGGGATGAAACTAATGACCAAAGTGGTGTTAAGGG...CCAGTATAGCCTGATGAATGTCATGATTACAGGCAAGAACCCCATACCCAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | CAATTGGGTATGGGGTTCTTGCCTGTAATCATGACATTCATCAGGCTATACTGGTTGTTACCCCTGGACTaGAGAAAAATGGTGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLGMGFLPVIMTFIRLYWLLPLD*RKMVTA Trigger: AGCTGTCACCATTTTTCTCCAGTCCAGGGGTAACAA...CCAGTATAGCCTGATGAATGTCATGATTACAGGCAAGAACCCCATACCCAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR TCA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAATTTGTAAGCTTCAATTaGCATGACAGGTCCTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KNSGGRDGVLGQPGLHLEFVSFN*HDRSCL Trigger: TAAACAGGACCTGTCATGTCAATTGAAGCTTACAAA...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | AATCTATCCCAGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACGTGCACAGAGCTGCTTaGGTTTTGTCAGCTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLSQIPTVDHNSPKGCFHVHRAA*VLSAYL Trigger: AAGATAAGCTGACAAAACCCAAGCAGCTCTGTGCAC...GTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGGATAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | AATCTATCCCAGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACCTTCCAGTCTCTTCCTaGCTTTCTTTACCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NLSQIPTVDHNSPKGCFHLPVSS*LSLPSR Trigger: TCTGGAAGGTAAAGAAAGCCAGGAAGAGACTGGAAG...GTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGGATAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR TCA 90 bp | AATCTATCCCAGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACTTCATTCTCAGGGTATaGAGTTATTGTGGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSQIPTVDHNSPKGCFHFILRV*SYCGHW Trigger: CCAGTGACCACAATAACTTCATACCCTGAGAATGAA...GTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGGATAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGATCACAACTCACCAAAAGGATGTTTCCACATGAATTCTCTTACATAACATCTCCAGGAGTAAGCTaGCCCTTAACACCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGSQLTKRMFPHEFSYITSPGVS*PLTPLW Trigger: CCAAAGTGGTGTTAAGGGTCAGCTTACTCCTGGAGA...TGTTATGTAAGAGAATTCATGTGGAAACATCCTTTTGGTGAGTTGTGATCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR TCA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTACTGGAGAAAAATGGTaGCAGCTGAAAAGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GREQQKFKFKVSRPQDLLTGEKW*QLKSHL Trigger: CAAATGGCTTTTCAGCTGTCACCATTTTTCTCCAGT...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR TCA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTTTTACCTTCCAGATCTaGCTCAGGATGTCTGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: GREQQKFKFKVSRPQDLLFTFQI*LRMSAI Trigger: TATTGCAGACATCCTGAGTCAGATCTGGAAGGTAAA...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR TCA 90 bp | AATCTATCCCAGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACTTTACCTTCCAGATCTaGCTCAGGATGTCTGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: NLSQIPTVDHNSPKGCFHFTFQI*LRMSAI Trigger: TATTGCAGACATCCTGAGTCAGATCTGGAAGGTAAA...GTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGGATAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | AATCTATCCCAGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACTTTTTCGGGACAATCTaGGTCTCTCTTCTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLSQIPTVDHNSPKGCFHFFGTI*VSLLFC Trigger: ACAGAAGAGAAGAGAGACCCAGATTGTCCCGAAAAA...GTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGGATAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTTTTTTCGGGACAATCTaGGTCTCTCTTCTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GREQQKFKFKVSRPQDLLFFGTI*VSLLFC Trigger: ACAGAAGAGAAGAGAGACCCAGATTGTCCCGAAAAA...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | CAATTGGGTATGGGGTTCTTGCCTGTAATCATGACATTCATCAGGCTATACTGGGGTATGAAGTTATTGTaGTCACTGGCTTTGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLGMGFLPVIMTFIRLYWGMKLL*SLALQR Trigger: TCTTTGCAAAGCCAGTGACCACAATAACTTCATACC...CCAGTATAGCCTGATGAATGTCATGATTACAGGCAAGAACCCCATACCCAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR TCA 90 bp | AATCTATCCCAGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACAAGCTTCAATTGACATaGCAGGTCCTGTTTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLSQIPTVDHNSPKGCFHKLQLT*QVLFIL Trigger: GAGAATAAACAGGACCTGTCATGTCAATTGAAGCTT...GTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGGATAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | AATCTATCCCAGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACCACCAGTTCTATGTTTaGCCTTTATCTTTTTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLSQIPTVDHNSPKGCFHHQFYV*PLSFSG Trigger: TCCCGAAAAAGATAAAGGCCAAACATAGAACTGGTG...GTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGGATAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGATCACAACTCACCAAAAGGATGTTTCCACATGAATTCTCTTACATAACACCTCTCTCCTGTACCTaGTTTCATTCTCAGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: CGSQLTKRMFPHEFSYITPLSCT*FHSQGM Trigger: CATACCCTGAGAATGAAACCAGGTACAGGAGAGAGG...TGTTATGTAAGAGAATTCATGTGGAAACATCCTTTTGGTGAGTTGTGATCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR TCA 90 bp | AATCTATCCCAGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACTTTGTAAGCTTCAATTaGCATGACAGGTCCTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NLSQIPTVDHNSPKGCFHFVSFN*HDRSCL Trigger: TAAACAGGACCTGTCATGTCAATTGAAGCTTACAAA...GTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGGATAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGATCACAACTCACCAAAAGGATGTTTCCACATGAATTCTCTTACATAACAATCCCGCATTCCCAGTaGAATTCTTTCTACAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CGSQLTKRMFPHEFSYITIPHSQ*NSFYRV Trigger: AACCCTGTAGAAAGAATTGCACTGGGAATGCGGGAT...TGTTATGTAAGAGAATTCATGTGGAAACATCCTTTTGGTGAGTTGTGATCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGATCACAACTCACCAAAAGGATGTTTCCACATGAATTCTCTTACATAACAGTGCACAGAGCTGCTTaGGTTTTGTCAGCTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CGSQLTKRMFPHEFSYITVHRAA*VLSAYL Trigger: AAGATAAGCTGACAAAACCCAAGCAGCTCTGTGCAC...TGTTATGTAAGAGAATTCATGTGGAAACATCCTTTTGGTGAGTTGTGATCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGATCACAACTCACCAAAAGGATGTTTCCACATGAATTCTCTTACATAACAAAGCTTCAATTGACATaGCAGGTCCTGTTTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGSQLTKRMFPHEFSYITKLQLT*QVLFIL Trigger: GAGAATAAACAGGACCTGTCATGTCAATTGAAGCTT...TGTTATGTAAGAGAATTCATGTGGAAACATCCTTTTGGTGAGTTGTGATCCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGATCACAACTCACCAAAAGGATGTTTCCACATGAATTCTCTTACATAACACACCAGTTCTATGTTTaGCCTTTATCTTTTTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGSQLTKRMFPHEFSYITHQFYV*PLSFSG Trigger: TCCCGAAAAAGATAAAGGCCAAACATAGAACTGGTG...TGTTATGTAAGAGAATTCATGTGGAAACATCCTTTTGGTGAGTTGTGATCCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS GCA 90 bp | TCATCTTTGCTCCCCCATGTTCTCTGCCTGCCTGGCAAGACTGTCTaGCTCCAAGGCTACTTCCAGTCTCTTCCTGGCTTTCTTTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLLPHVLCLPGKTV*LQGYFQSLPGFLYL Trigger: AAGGTAAAGAAAGCCAGGAAGAGACTGGAAGTAGCCTTGGAGGCAGACAGTCTTGCCAGGCAGGCAGAGAACATGGGGGAGCAAAGATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CAA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAAAGAGCTGCTTGGGTTTaGTCAGCTTATCTTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KNSGGRDGVLGQPGLHLERAAWV*SAYLPL Trigger: GAGAGGAAGATAAGCTGACAAAACCCAAGCAGCTCT...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CAA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAAACCCTTAACACCACTTaGGTCATTAGTTTCATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KNSGGRDGVLGQPGLHLETLNTT*VISFIP Trigger: CGGGATGAAACTAATGACCAAAGTGGTGTTAAGGGT...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CAA 90 bp | AAAAACTCTGGAGGCAGAGATGGGGTTCTAGGACAACCAGGGTTACATCTGGAACTATCAAAGGCTGGCTaGAAACTGAGTTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KNSGGRDGVLGQPGLHLELSKAG*KLSFLK Trigger: CTTCAAGAAACTCAGTTTCAAGCCAGCCTTTGATAG...TTCCAGATGTAACCCTGGTTGTCCTAGAACCCCATCTCTGCCTCCAGAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGAGAGCAACAGAAATTTAAATTCAAGGTCTCAAGGCCACAAGACCTGCTTTTCCAAGCATGGGGTTaGGACAGAGGTAACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GREQQKFKFKVSRPQDLLFQAWG*DRGNFS Trigger: GGAGAAGTTACCTCTGTCCAAACCCCATGCTTGGAA...AAGCAGGTCTTGTGGCCTTGAGACCTTGAATTTAAATTTCTGTTGCTCTCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS TCA 90 bp | CAGCTTATCTTCCTCTCTCCTGTACCTGGTTTCATTCTCAGGGTATaGAGTTATTGTGGTCACTGGCTTTGCAAAGATGCAACTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QLIFLSPVPGFILRV*SYCGHWLCKDATGH Trigger: ATGACCAGTTGCATCTTTGCAAAGCCAGTGACCACAATAACTTCATACCCTGAGAATGAAACCAGGTACAGGAGAGAGGAAGATAAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS GCA 90 bp | GTCCTGTTTATTCTCTCCAACTTGATGTTTCTTCAGTCTCTTAAGTaGACAGAGCTGCTTGGGTTTTGTCAGCTTATCTTCCTCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLFILSNLMFLQSLK*TELLGFCQLIFLSP Trigger: AGGAGAGAGGAAGATAAGCTGACAAAACCCAAGCAGCTCTGTGCACTTAAGAGACTGAAGAAACATCAAGTTGGAGAGAATAAACAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CAA 90 bp | AATCTATCCCAGATTCCTACTGTGGATCACAACTCACCAAAAGGATGTTTCCACCTATCAAAGGCTGGCTaGAAACTGAGTTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NLSQIPTVDHNSPKGCFHLSKAG*KLSFLK Trigger: CTTCAAGAAACTCAGTTTCAAGCCAGCCTTTGATAG...GTGGAAACATCCTTTTGGTGAGTTGTGATCCACAGTAGGAATCTGGGATAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCACAACTCACCAAAAGGATGTTTCCACATGAATTCTCTTACATAACAAGAGCTGCTTGGGTTTaGTCAGCTTATCTTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CGSQLTKRMFPHEFSYITRAAWV*SAYLPL Trigger: GAGAGGAAGATAAGCTGACAAAACCCAAGCAGCTCT...TGTTATGTAAGAGAATTCATGTGGAAACATCCTTTTGGTGAGTTGTGATCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS TCA 90 bp | TCCCAGTGCAATTCTTTCTACAGGGTTTGTAAGCTTCAATTGACATaGCAGGTCCTGTTTATTCTCTCCAACTTGATGTTTCTTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQCNSFYRVCKLQLT*QVLFILSNLMFLQS Trigger: AGACTGAAGAAACATCAAGTTGGAGAGAATAAACAGGACCTGTCATGTCAATTGAAGCTTACAAACCCTGTAGAAAGAATTGCACTGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS GCA 72 bp | CTCCCCCATGTTCTCTGCCTGCCTGGCAAGACTGTCTaGCTCCAAGGCTACTTCCAGTCTCTTCCTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LPHVLCLPGKTV*LQGYFQSLPGF Trigger: AAAGCCAGGAAGAGACTGGAAGTAGCCTTGGAGGCAGACAGTCTTGCCAGGCAGGCAGAGAACATGGGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS CCA 72 bp | GACTGTCTGCCTCCAAGGCTACTTCCAGTCTCTTCCTaGCTTTCTTTACCTTCCAGATCTGACTCAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: DCLPPRLLPVSS*LSLPSRSDSGC Trigger: ACATCCTGAGTCAGATCTGGAAGGTAAAGAAAGCCAGGAAGAGACTGGAAGTAGCCTTGGAGGCAGACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS TCA 72 bp | GTCTGCAATAGTTACTTCTTGGATGAAGTAAGATGGTaGCAGATGAAGACGCACTGGCATTGTTACCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VCNSYFLDEVRW*QMKTHWHCYPW Trigger: CCAGGGGTAACAATGCCAGTGCGTCTTCATCTGTCACCATCTTACTTCATCCAAGAAGTAACTATTGCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS TCA 72 bp | TTCCTCTCTCCTGTACCTGGTTTCATTCTCAGGGTATaGAGTTATTGTGGTCACTGGCTTTGCAAAGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: FLSPVPGFILRV*SYCGHWLCKDA Trigger: TGCATCTTTGCAAAGCCAGTGACCACAATAACTTCATACCCTGAGAATGAAACCAGGTACAGGAGAGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS CAA 72 bp | TCCTGTACCTGGTTTCATTCTCAGGGTATGAAGTTATaGTGGTCACTGGCTTTGCAAAGATGCAACTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCTWFHSQGMKL*WSLALQRCNWS Trigger: TGACCAGTTGCATCTTTGCAAAGCCAGTGACCACAATAACTTCATACCCTGAGAATGAAACCAGGTACAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS CAA 90 bp | CTGGTCATCCTCATAGAATCTTTGGAAGTAACACCAGTTCTATGTTaGGCCTTTATCTTTTTCGGGACAATCTGGGTCTCTCTTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVILIESLEVTPVLC*AFIFFGTIWVSLLF Trigger: GAAGAGAAGAGAGACCCAGATTGTCCCGAAAAAGATAAAGGCCAAACATAGAACTGGTGTTACTTCCAAAGATTCTATGAGGATGACCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS GCA 72 bp | ATTCTCTCCAACTTGATGTTTCTTCAGTCTCTTAAGTaGACAGAGCTGCTTGGGTTTTGTCAGCTTATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILSNLMFLQSLK*TELLGFCQLIF Trigger: GAAGATAAGCTGACAAAACCCAAGCAGCTCTGTGCACTTAAGAGACTGAAGAAACATCAAGTTGGAGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS GCA 72 bp | ACCACTTTGGTCATTAGTTTCATCCCGCATTCCCAGTaGAATTCTTTCTACAGGGTTTGTAAGCTTCAATTG | + |
|
Preference number: 6 (lower is better) Translates to: TTLVISFIPHSQ*NSFYRVCKLQL Trigger: CAATTGAAGCTTACAAACCCTGTAGAAAGAATTGCACTGGGAATGCGGGATGAAACTAATGACCAAAGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS CAA 72 bp | TTCGGGACAATCTGGGTCTCTCTTCTCTTCTGTAATTaGTTGAGTATCATACTTCTTGTGAGACTTCCTATC | + |
|
Preference number: 6 (lower is better) Translates to: FGTIWVSLLFCN*LSIILLVRLPI Trigger: GATAGGAAGTCTCACAAGAAGTATGATACTCAACAAATTACAGAAGAGAAGAGAGACCCAGATTGTCCCGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS CAA 72 bp | CTCATAGAATCTTTGGAAGTAACACCAGTTCTATGTTaGGCCTTTATCTTTTTCGGGACAATCTGGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LIESLEVTPVLC*AFIFFGTIWVS Trigger: AGAGACCCAGATTGTCCCGAAAAAGATAAAGGCCAAACATAGAACTGGTGTTACTTCCAAAGATTCTATGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS CCA 72 bp | GTTCTATGTTTGGCCTTTATCTTTTTCGGGACAATCTaGGTCTCTCTTCTCTTCTGTAATTTGTTGAGTATC | + |
|
Preference number: 6 (lower is better) Translates to: VLCLAFIFFGTI*VSLLFCNLLSI Trigger: GATACTCAACAAATTACAGAAGAGAAGAGAGACCCAGATTGTCCCGAAAAAGATAAAGGCCAAACATAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS CAA 72 bp | GGGACAATCTGGGTCTCTCTTCTCTTCTGTAATTTGTaGAGTATCATACTTCTTGTGAGACTTCCTATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GTIWVSLLFCNL*SIILLVRLPIK Trigger: TTTGATAGGAAGTCTCACAAGAAGTATGATACTCAACAAATTACAGAAGAGAAGAGAGACCCAGATTGTCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||
| CDS TCA 72 bp | AATTCTTTCTACAGGGTTTGTAAGCTTCAATTGACATaGCAGGTCCTGTTTATTCTCTCCAACTTGATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NSFYRVCKLQLT*QVLFILSNLMF Trigger: AAACATCAAGTTGGAGAGAATAAACAGGACCTGTCATGTCAATTGAAGCTTACAAACCCTGTAGAAAGAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051008.9 ENSMUST00000213777.2 |
||