Pregenerated sensors for MBD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035478Ensembl transcript IDs: ENSMUST00000092295.10, ENSMUST00000105347.2, ENSMUST00000105348.8, ENSMUST00000105349.8, ENSMUST00000142997.8
Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGGAGGCTTTGGAAAGGAGGTGGACGGCTGCCTCCTACAGGTCTaGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: AGGFGKEVDGCLLQV*PLPGPGKAEGSLQP Trigger: GGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTTCCAAAGCCTCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR CCA 90 bp | GGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTaGAAAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACC | + |
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Preference number: 1 (lower is better) Translates to: GPQGLPALRPGSRRL*KGGGRLPPTGLAPT Trigger: GGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR CCA 90 bp | GCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTaGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: APCTETWKQEALERR*TAASYRSGPYLVQA Trigger: TGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR GCA 90 bp | AGGCAGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTaGTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RQGGDCVQVASQLGH*SSAFSVGLPARQRR Trigger: CCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR TCA 90 bp | AGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTaGGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: SAGTSEFKVHRGSLH*DLEAGGFGKEVDGC Trigger: GCAGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR TCA 90 bp | TCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGACAAGTaGGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: SAFSVGLPARQRRDK*VQGPQGLPALRPGS Trigger: GCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR GCA 90 bp | CAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTaGACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACG | + |
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Preference number: 1 (lower is better) Translates to: QAAQGQVSSRSTGAP*TETWKQEALERRWT Trigger: CGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR CCA 90 bp | GGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTaGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGCTGCCTCCTAC | + |
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Preference number: 1 (lower is better) Translates to: GQVSSRSTGAPCTET*KQEALERRWTAASY Trigger: GTAGGAGGCAGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR GCA 90 bp | CTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTaGCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LSVGSLLICFQCGAS*QAAQGQVSSRSTGA Trigger: AGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR CCA 90 bp | TCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTaGGGCTTCCTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: SRWPLSWVTAHLLSV*GFLPGSAGTSEFKV Trigger: GACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR TCA 90 bp | TCGGTGCCAAGCAAGGCCTTGTCCTATGATAAGGAGGCAGGGAGGTaGCTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGC | + |
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Preference number: 1 (lower is better) Translates to: SVPSKALSYDKEAGR*LCPGGLSVGSLLIC Trigger: GCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTGCCTCCTTATCATAGGACAAGGCCTTGCTTGGCACCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGAGGGGCTCCCTGCACTaGGACCTGGAAGCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GAPCTETWKQEALERRWTRGSLH*DLEAGG Trigger: GCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCT...CGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACCAGCGCAGGGACAAGTaGGTTCAAGGTCCACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LPGSAGTSEFKVHRGSLHQRRDK*VQGPQG Trigger: CCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTG...GTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACAGGCTGAAGGCAGTCTaGAGCCCAGACTTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LPGSAGTSEFKVHRGSLHRLKAV*SPDLGR Trigger: CCTGCCCAAGTCTGGGCTGCAGACTGCCTTCAGCCT...GTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTAGGGGCTCCCTGCACTaGGACCTGGAAGCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: RQGGDCVQVASQLGHCSSRGSLH*DLEAGG Trigger: GCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCT...AGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGAGGGGCTCCCTGCACTaGGACCTGGAAGCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: QGQVSSRSTGAPCTETWKRGSLH*DLEAGG Trigger: GCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCT...CTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGAGGCTGAAGGCAGTCTaGAGCCCAGACTTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GLPALRPGSRRLWKGGGRRLKAV*SPDLGR Trigger: CCTGCCCAAGTCTGGGCTGCAGACTGCCTTCAGCCT...CCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACGCTTTGGAAAGGAGGTaGACGGCTGCCTCCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: LPGSAGTSEFKVHRGSLHALERR*TAASYR Trigger: CCTGTAGGAGGCAGCCGTCCACCTCCTTTCCAAAGC...GTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGAGCCCGGCTAGGGGATaGGCTGACATCCCACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: QVSSRSTGAPCTETWKQESPARG*ADIPPW Trigger: CCAGGGTGGGATGTCAGCCCATCCCCTAGCCGGGCT...CTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142997.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGCAGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCACAGCGCAGGGACAAGTaGGTTCAAGGTCCACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: RRQGGDCVQVASQLGHCSQRRDK*VQGPQG Trigger: CCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTG...TGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTGCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGACAAGTTGCCTCCTACAGGTCTaGCCCCTACCTGGTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: TAHLLSVWGFLPGSAGTSCLLQV*PLPGPG Trigger: GCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCA...ACTTGTCCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGTGCCTCCTACAGGTCTaGCCCCTACCTGGTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QVSSRSTGAPCTETWKQECLLQV*PLPGPG Trigger: GCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCA...CTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCCAGAAACTTCCTCCAGCACCCAACACGGCTCCCAGCTCCTCGGTGCCATGCCTCCTACAGGTCTaGCCCCTACCTGGTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: CFQKLPPAPNTAPSSSVPCLLQV*PLPGPG Trigger: GCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCA...TGGCACCGAGGAGCTGGGAGCCGTGTTGGGTGCTGGAGGAAGTTTCTGGAAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCACCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGGGAAGCAGGAGGCTTTaGAAAGGAGGTGGACGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QHPTRLPAPRCQARPCPMGSRRL*KGGGRL Trigger: CAGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCC...CATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR GCA 90 bp | CACCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGATAAGGCTGAAGGCAGTCTaGAGCCCAGACTTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: HPTRLPAPRCQARPCPMIRLKAV*SPDLGR Trigger: CCTGCCCAAGTCTGGGCTGCAGACTGCCTTCAGCCT...TATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAACTTCCTCCAGCACCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCTTTGGAAAGGAGGTaGACGGCTGCCTCCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: QKLPPAPNTAPSSSVPSKALERR*TAASYR Trigger: CCTGTAGGAGGCAGCCGTCCACCTCCTTTCCAAAGC...CTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTGCTGGAGGAAGTTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCCACAGGGGCTCCCTaGACTGAGACCTGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: REVTVSRWPLSWVTAHLLSTGAP*TETWKQ Trigger: CTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGA...AAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGATAAGCTTGGGCAGGGCACCTaGAATAGGCAGGAAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PNTAPSSSVPSKALSYDKLGQGT*NRQEGK Trigger: CTTCCCTTCCTGCCTATTGCAGGTGCCCTGCCCAAG...CTTATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142997.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGGAAGCAGGAGGCTTTaGAAAGGAGGTGGACGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSWVTAHLLSVWGFLPGSGSRRL*KGGGRL Trigger: CAGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCC...GCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCGGAGCAGTCCAGACCCTGGCCTGTAATAGCCTTAGGGACATAAGGTGGGGAAGCAGGAGGCTTTaGAAAGGAGGTGGACGGCTG | + |
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Preference number: 2 (lower is better) Translates to: WAGAVQTLACNSLRDIRWGSRRL*KGGGRL Trigger: CAGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCC...CCACCTTATGTCCCTAAGGCTATTACAGGCCAGGGTCTGGACTGCTCCGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR CAA 90 bp | ATGATAAGGAGGCAGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTaGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: MIRRQGGDCVQVASQ*GHCSSAFSVGLPAR Trigger: CCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTGCCTCCTTATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAAGGCTGAAGGCAGTCTaGAGCCCAGACTTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: EVTVSRWPLSWVTAHLLSRLKAV*SPDLGR Trigger: CCTGCCCAAGTCTGGGCTGCAGACTGCCTTCAGCCT...TGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR GCA 72 bp | GGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTaGAGCCCAGACTTGGGCAGGGCACCTGCAATAGGC | + |
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Preference number: 3 (lower is better) Translates to: GPYLVQARLKAV*SPDLGRAPAIG Trigger: GCCTATTGCAGGTGCCCTGCCCAAGTCTGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142997.8 |
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| 3UTR CCA 72 bp | GCAGGAAGGGAAGCTGTTAGCAGCCCGGCTAGGGGATaGGCTGACATCCCACCCTGGCCTGCAGCACCTGTG | + |
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Preference number: 3 (lower is better) Translates to: AGREAVSSPARG*ADIPPWPAAPV Trigger: CACAGGTGCTGCAGGCCAGGGTGGGATGTCAGCCCATCCCCTAGCCGGGCTGCTAACAGCTTCCCTTCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142997.8 |
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| 3UTR GCA 72 bp | CTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGCTaGCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LEAGGFGKEVDG*LLQVWPLPGPG Trigger: GCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR GCA 72 bp | GAAGGCAGTCTGCAGCCCAGACTTGGGCAGGGCACCTaGAATAGGCAGGAAGGGAAGCTGTTAGCAGCCCGG | + |
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Preference number: 3 (lower is better) Translates to: EGSLQPRLGQGT*NRQEGKLLAAR Trigger: CCGGGCTGCTAACAGCTTCCCTTCCTGCCTATTGCAGGTGCCCTGCCCAAGTCTGGGCTGCAGACTGCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142997.8 |
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| 3UTR CCA 72 bp | GGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTaGAAAGGAGGTGGACGGCTGCCTCCTACAGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: GLPALRPGSRRL*KGGGRLPPTGL Trigger: CAGACCTGTAGGAGGCAGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR GCA 72 bp | TGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTaGTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAG | + |
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Preference number: 3 (lower is better) Translates to: CPGGLSVGSLLI*FQCGASCQAAQ Trigger: CTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR GCA 72 bp | GGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTaGTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GDCVQVASQLGH*SSAFSVGLPAR Trigger: CCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR GCA 72 bp | TTCCTCCAGCACCCAACACGGCTCCCAGCTCCTCGGTaGCAAGCAAGGCCTTGTCCTATGATAAGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: FLQHPTRLPAPR*QARPCPMIRRQ Trigger: CTGCCTCCTTATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTGCTGGAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR CCA 72 bp | AGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTaGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSRSTGAPCTET*KQEALERRWTA Trigger: AGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| 3UTR TCA 72 bp | AGTTTATTGAAGGAAAGTGACTTCCTGGTGGGCTGCTaGCCCTCAGTGTGGGGAGGCTGGGCAGCCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLLKESDFLVGC*PSVWGGWAALW Trigger: CCACAGGGCTGCCCAGCCTCCCCACACTGAGGGTCAGCAGCCCACCAGGAAGTCACTTTCCTTCAATAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| 3UTR GCA 72 bp | CAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTaGACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QGQVSSRSTGAP*TETWKQEALER Trigger: CCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| 3UTR TCA 72 bp | ACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTaGGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TSEFKVHRGSLH*DLEAGGFGKEV Trigger: CACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| 3UTR TCA 72 bp | TTCACAAGTTCCTACCATCAGTTTATTGAAGGAAAGTaGCTTCCTGGTGGGCTGCTGACCCTCAGTGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FTSSYHQFIEGK*LPGGLLTLSVG Trigger: CCCCACACTGAGGGTCAGCAGCCCACCAGGAAGTCACTTTCCTTCAATAAACTGATGGTAGGAACTTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTTCCCTTTCCCAGCCCTaGGGGAGCGCCGGGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQAAQGQVSSRSTGAPCTSLSQP*GSAGHS Trigger: GGAGTGCCCGGCGCTCCCGCAGGGCTGGGAAAGGGA...AGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGGCCTTGTCCAGTGGTaGCTCCCCGTCTCGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVDGCLLQVWPLPGPGKAGLVQW*LPVSGK Trigger: CTTGCCCGAGACGGGGAGGCACCACTGGACAAGGCC...AGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGGGCCTTGTCCAGTGGTaGCTCCCCGTCTCGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RWTAASYRSGPYLVQARLGLVQW*LPVSGK Trigger: CTTGCCCGAGACGGGGAGGCACCACTGGACAAGGCC...CAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | GACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCCCTCGGCTGGTCCACTaGCTTCTGCGGGTCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DGCLLQVWPLPGPGKAEGPRLVH*LLRVAL Trigger: AAGAGCGACCCGCAGAAGGCAGTGGACCAGCCGAGG...GCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTTCTGCGGGTCGCTCTTaGCCTTGTTGCTGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVDGCLLQVWPLPGPGKASAGRS*PCCWGG Trigger: ACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGA...AGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGTCCGCCCAGGTAACGTaGCAGTTGTGGCTTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RWTAASYRSGPYLVQARLSAQVT*QLWLAA Trigger: CGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGA...CAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGGCCTTGTCCAGTGGTaGCTCCCCGTCTCGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GAPCTETWKQEALERRWTGLVQW*LPVSGK Trigger: CTTGCCCGAGACGGGGAGGCACCACTGGACAAGGCC...CGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCAGACTTGACAGGCCTTGTCCAGTaGTGCCTCCCCGTCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPYLVQARLKAVCSPDLTGLVQ*CLPVSG Trigger: GCCCGAGACGGGGAGGCACCACTGGACAAGGCCTGT...CAAGTCTGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCAGACTTGCCTCGGCTGGTCCACTaGCTTCTGCGGGTCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGPYLVQARLKAVCSPDLPRLVH*LLRVAL Trigger: AAGAGCGACCCGCAGAAGGCAGTGGACCAGCCGAGG...CAAGTCTGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGCCTCGGCTGGTCCACTaGCTTCTGCGGGTCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GAPCTETWKQEALERRWTPRLVH*LLRVAL Trigger: AAGAGCGACCCGCAGAAGGCAGTGGACCAGCCGAGG...CGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGCATGTCGGCCATCAGTaGCTCCTCCAGGCGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QHPTRLPAPRCQARPCPMHVGHQ*LLQALP Trigger: CGGAAGCGCCTGGAGGAGGCACTGATGGCCGACATG...CATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTCATGTCGGCCATCAGTaGCTCCTCCAGGCGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CQAAQGQVSSRSTGAPCTHVGHQ*LLQALP Trigger: CGGAAGCGCCTGGAGGAGGCACTGATGGCCGACATG...AGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAACATGTCGGCCATCAGTaGCTCCTCCAGGCGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KGGGRLPPTGLAPTWSRQHVGHQ*LLQALP Trigger: CGGAAGCGCCTGGAGGAGGCACTGATGGCCGACATG...TTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | TACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCAGAGGGGCCAGGGAGGTaGTTAGCCAGAGCCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: YRSGPYLVQARLKAVCSPEGPGR*LARALT Trigger: GGTCAAGGCTCTGGCTAAGCACCTCCCTGGCCCCTC...TGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105348.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGAAAAGCTGCCTCGGCTaGTCCACTGCCTTCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEVDGCLLQVWPLPGPGKKSCLG*STAFCG Trigger: CCCGCAGAAGGCAGTGGACCAGCCGAGGCAGCTTTT...CTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACACGGCTGCAGAGAGCTaGCCTGTAATGGGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSAGTSEFKVHRGSLHTAAES*PVMGRV Trigger: CACCCTGCCCATTACAGGCCAGCTCTCTGCAGCCGT...GTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGCTACAGGCCTTGTCCAGTaGTGCCTCCCCGTCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: APCTETWKQEALERRWTATGLVQ*CLPVSG Trigger: GCCCGAGACGGGGAGGCACCACTGGACAAGGCCTGT...AGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAACTTCCTCCAGCACCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGACAGGCCTTGTCCAGTaGTGCCTCCCCGTCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKLPPAPNTAPSSSVPSKTGLVQ*CLPVSG Trigger: GCCCGAGACGGGGAGGCACCACTGGACAAGGCCTGT...CTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTGCTGGAGGAAGTTTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGTCCGACCGGGGTCCATaGAGGGTTGGAGGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVSSRSTGAPCTETWKQESDRGP*RVGGAR Trigger: CCTGGCCCCTCCAACCCTCCATGGACCCCGGTCGGA...CTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105348.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAATCTGCGGGTCGCTCTTaGCCTTGTTGCTGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KGGGRLPPTGLAPTWSRQSAGRS*PCCWGG Trigger: ACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGA...TTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGTCTGCGGGTCGCTCTTaGCCTTGTTGCTGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WVTAHLLSVWGFLPGSAGSAGRS*PCCWGG Trigger: ACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGA...CCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGTCTGCGGGTCGCTCTTaGCCTTGTTGCTGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QHPTRLPAPRCQARPCPMSAGRS*PCCWGG Trigger: ACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGA...CATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGCTCCTCCTGCTTCCTaGTGTCGTCATCTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EVDGCLLQVWPLPGPGKAAPPAS*CRHLSP Trigger: TGGTGACAGATGACGACATCAGGAAGCAGGAGGAGC...AGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | GTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGCAAGCTCCTCCACATaGGCTAGCATGTCGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VDGCLLQVWPLPGPGKAEASSST*ASMSAI Trigger: GATGGCCGACATGCTAGCTCATGTGGAGGAGCTTGC...TTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCAGACTTGTCCGCCCAGGTAACGTaGCAGTTGTGGCTTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGPYLVQARLKAVCSPDLSAQVT*QLWLAA Trigger: CGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGA...CAAGTCTGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS-3UTR GCA 90 bp | GTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAATGGTCCACTGCCTTCTaGGGGTCGCTCTTGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VDGCLLQVWPLPGPGKAEWSTAF*GSLLTL Trigger: CAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCA...TTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACCTCCTCTTCCTCCTCTaGACAGGCCTTGTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSAGTSEFKVHRGSLHLLFLL*TGLVQW Trigger: CCACTGGACAAGGCCTGTGCAGAGGAGGAAGAGGAG...GTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGACGGCTGCAGAGAGCTaGCCTGTAATGGGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WVTAHLLSVWGFLPGSAGTAAES*PVMGRV Trigger: CACCCTGCCCATTACAGGCCAGCTCTCTGCAGCCGT...CCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCACAGGCCTTGTCCAGTaGTGCCTCCCCGTCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSWVTAHLLSVWGFLPGTGLVQ*CLPVSG Trigger: GCCCGAGACGGGGAGGCACCACTGGACAAGGCCTGT...GCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| 3UTR CAA 72 bp | GTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCAGACTaGGGCAGGGCACCTGCAATAGGCAGGAAGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQARLKAVCSPD*GRAPAIGRKGS Trigger: GCTTCCCTTCCTGCCTATTGCAGGTGCCCTGCCCAAGTCTGGGCTGCAGACTGCCTTCAGCCTTGCCTGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTCCTCCTGCTTCCTaGTGTCGTCATCTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KEVDGCLLQVWPLPGPGKAPPAS*CRHLSP Trigger: TGGTGACAGATGACGACATCAGGAAGCAGGAGGAGC...CTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCAGCAAGCTCCTCCACATaGGCTAGCATGTCGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: YRSGPYLVQARLKAVCSPASSST*ASMSAI Trigger: GATGGCCGACATGCTAGCTCATGTGGAGGAGCTTGC...TGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAATTCTCCCAGAAAAGCTaGCTCGGCTGGTCCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGGGRLPPTGLAPTWSRQFSQKS*LGWSTA Trigger: GGCAGTGGACCAGCCGAGGCAGCTTTTCTGGGAGAA...TTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCATGTCGGCCATCAGTaGCTCCTCCAGGCGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGLSVGSLLICFQCGASCHVGHQ*LLQALP Trigger: CGGAAGCGCCTGGAGGAGGCACTGATGGCCGACATG...GCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCGGCCTTGTCCAGTGGTaGCTCCCCGTCTCGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGDCVQVASQLGHCSSAFGLVQW*LPVSGK Trigger: CTTGCCCGAGACGGGGAGGCACCACTGGACAAGGCC...GAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGCTCCTCTTCCTCCTCTaGACAGGCCTTGTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLPALRPGSRRLWKGGGRLLFLL*TGLVQW Trigger: CCACTGGACAAGGCCTGTGCAGAGGAGGAAGAGGAG...CCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTACAGCCCCGACCTCCTaGGCACTTCTTCCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSSRSTGAPCTETWKQEATAPTS*ALLPFP Trigger: GGGAAAGGGAAGAAGTGCCCAGGAGGTCGGGGCTGT...AGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGGAAGTCGAAGGTGCTaGGGTCCATGGATCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSWVTAHLLSVWGFLPGSGSRRC*GPWIRP Trigger: TGGGCGGATCCATGGACCTCAGCACCTTCGACTTCC...GCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGGAAGTCGAAGGTGCTaGGGTCCATGGATCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSRSTGAPCTETWKQEALGSRRC*GPWIRP Trigger: TGGGCGGATCCATGGACCTCAGCACCTTCGACTTCC...CAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGCTTGCTGGGGTGGTTGGTaGTCTTGGTCACCGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: APCTETWKQEALERRWTACWGGW*SWSPVA Trigger: AGCAACCGGTGACCAAGATCACCAACCACCCCAGCA...AGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | GTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAACGTCATCTGTCACCATaGAGGCTTTGCACAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VDGCLLQVWPLPGPGKAERHLSP*RLCTVA Trigger: AGCCACTGTGCAAAGCCTTCATGGTGACAGATGACG...TTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCACGTCATCTGTCACCATaGAGGCTTTGCACAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERRWTAASYRSGPYLVQARHLSP*RLCTVA Trigger: AGCCACTGTGCAAAGCCTTCATGGTGACAGATGACG...TGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGCTCCAGTTGTGGCTTGCTaGGGAACTTCTTCCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: APCTETWKQEALERRWTAPVVAC*GTSSRW Trigger: CCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGG...AGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGCCAGTTGTGGCTTGCTaGGGAACTTCTTCCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGHCSSAFSVGLPARQRRPVVAC*GTSSRW Trigger: CCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGG...CCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACATTCTCCCAGAAAAGCTaGCTCGGCTGGTCCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCGASCQAAQGQVSSRSTFSQKS*LGWSTA Trigger: GGCAGTGGACCAGCCGAGGCAGCTTTTCTGGGAGAA...TGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAGGAAGCCCCACACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGTTTGCACAGTGGCTGTaGAGTGTTCAGCCACACACC | + |
|
Preference number: 4 (lower is better) Translates to: KEVDGCLLQVWPLPGPGKFAQWL*SVQPHT Trigger: GGTGTGTGGCTGAACACTGCACAGCCACTGTGCAAA...CTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | GCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGACAAGTGAGCTCCTCTTCCTCCTCTaGACAGGCCTTGTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHLLSVWGFLPGSAGTSELLFLL*TGLVQW Trigger: CCACTGGACAAGGCCTGTGCAGAGGAGGAAGAGGAG...CTCACTTGTCCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGACCTTGTTGCTGGGGTaGTTGGTGATCTTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KEVDGCLLQVWPLPGPGKTLLLG*LVILVT Trigger: GGTGACCAAGATCACCAACCACCCCAGCAACAAGGT...CTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTAAAAGCTGCCTCGGCTaGTCCACTGCCTTCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGGDCVQVASQLGHCSSAKSCLG*STAFCG Trigger: CCCGCAGAAGGCAGTGGACCAGCCGAGGCAGCTTTT...AGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCGGAGCAGTCCAGACCCTGGCCTGTAATAGCCTTAGGGACATAAGGTGGAAAAGCTGCCTCGGCTaGTCCACTGCCTTCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WAGAVQTLACNSLRDIRWKSCLG*STAFCG Trigger: CCCGCAGAAGGCAGTGGACCAGCCGAGGCAGCTTTT...CCACCTTATGTCCCTAAGGCTATTACAGGCCAGGGTCTGGACTGCTCCGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCAAAAGCTGCCTCGGCTaGTCCACTGCCTTCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLSVGSLLICFQCGASCKSCLG*STAFCG Trigger: CCCGCAGAAGGCAGTGGACCAGCCGAGGCAGCTTTT...GCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | CCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGATAAGACGGCTGCAGAGAGCTaGCCTGTAATGGGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PNTAPSSSVPSKALSYDKTAAES*PVMGRV Trigger: CACCCTGCCCATTACAGGCCAGCTCTCTGCAGCCGT...CTTATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCACGGCTGCAGAGAGCTaGCCTGTAATGGGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSWVTAHLLSVWGFLPGSTAAES*PVMGRV Trigger: CACCCTGCCCATTACAGGCCAGCTCTCTGCAGCCGT...GCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | CACCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGATATGCTGGGGTGGTTGGTaGTCTTGGTCACCGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPTRLPAPRCQARPCPMICWGGW*SWSPVA Trigger: AGCAACCGGTGACCAAGATCACCAACCACCCCAGCA...TATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGTGCTGGGGTGGTTGGTaGTCTTGGTCACCGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRSTGAPCTETWKQEALCWGGW*SWSPVA Trigger: AGCAACCGGTGACCAAGATCACCAACCACCCCAGCA...CAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGCGTCATCTGTCACCATaGAGGCTTTGCACAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WVTAHLLSVWGFLPGSAGRHLSP*RLCTVA Trigger: AGCCACTGTGCAAAGCCTTCATGGTGACAGATGACG...CCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGATAAGGAGGCAGGGGCTCCTCCTGCTTCCTaGTGTCGTCATCTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: APSSSVPSKALSYDKEAGAPPAS*CRHLSP Trigger: TGGTGACAGATGACGACATCAGGAAGCAGGAGGAGC...CCCTGCCTCCTTATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGACAAGTGCAAGCTCCTCCACATaGGCTAGCATGTCGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TAHLLSVWGFLPGSAGTSASSST*ASMSAI Trigger: GATGGCCGACATGCTAGCTCATGTGGAGGAGCTTGC...ACTTGTCCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGATAAGGAGGCAGGGAGGTCCAGTTGTGGCTTGCTaGGGAACTTCTTCCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAPRCQARPCPMIRRQGGPVVAC*GTSSRW Trigger: CCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGG...ACCTCCCTGCCTCCTTATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 |
||
| CDS-3UTR GCA 90 bp | GACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCATCTTGGTCACCGGTTaGTTGAAGATGGATGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DGCLLQVWPLPGPGKAEGILVTG*LKMDAV Trigger: GACTGCATCCATCTTCAAGCAACCGGTGACCAAGAT...GCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | CACCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGATATGGTCCACTGCCTTCTaGGGGTCGCTCTTGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPTRLPAPRCQARPCPMIWSTAF*GSLLTL Trigger: CAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCA...TATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | GGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTCCTCGGCTGGTCCACTaGCTTCTGCGGGTCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GDCVQVASQLGHCSSAFSPRLVH*LLRVAL Trigger: AAGAGCGACCCGCAGAAGGCAGTGGACCAGCCGAGG...ACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGTTCTCCCAGAAAAGCTaGCTCGGCTGGTCCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVSSRSTGAPCTETWKQEFSQKS*LGWSTA Trigger: GGCAGTGGACCAGCCGAGGCAGCTTTTCTGGGAGAA...CTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGTACCAGCTCCTCCTaGTTCCTGATGTCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGSAGTSEFKVHRGSLHCTSSS*FLMSSS Trigger: AGATGACGACATCAGGAAGCAGGAGGAGCTGGTACA...GTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCCTCCTCTTCCTCCTCTaGACAGGCCTTGTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSWVTAHLLSVWGFLPGLLFLL*TGLVQW Trigger: CCACTGGACAAGGCCTGTGCAGAGGAGGAAGAGGAG...GCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGTAACGTGCCAGTTGTaGCTTGCTGCGGAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KEVDGCLLQVWPLPGPGKVTCQL*LAAELL Trigger: AAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTAC...CTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGACCTTGTTGCTGGGGTaGTTGGTGATCTTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: WVTAHLLSVWGFLPGSAGTLLLG*LVILVT Trigger: GGTGACCAAGATCACCAACCACCCCAGCAACAAGGT...CCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCAGACTTGGTAGAGCACTCGCAATaGCTGACAGCAGCGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGPYLVQARLKAVCSPDLVEHSQ*LTAASH Trigger: ATGAGACGCTGCTGTCAGCCATTGCGAGTGCTCTAC...CAAGTCTGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGTAGAGCACTCGCAATaGCTGACAGCAGCGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CQAAQGQVSSRSTGAPCTVEHSQ*LTAASH Trigger: ATGAGACGCTGCTGTCAGCCATTGCGAGTGCTCTAC...AGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGTCAGGCTTGCCCTTaGCCTGGTTGGAAGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QCGASCQAAQGQVSSRSTGQACP*PGWKNH Trigger: ATGATTCTTCCAACCAGGTCAAGGGCAAGCCTGACC...TGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAGGAAGCCCCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGTGGTCACCGGTTGCTTaGAGATGGATGCAGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSTGAPCTETWKQEALWSPVA*RWMQSA Trigger: GGCAGACTGCATCCATCTTCAAGCAACCGGTGACCA...CAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGTGCTGGGGTGGTTGGTaGTCTTGGTCACCGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLGHCSSAFSVGLPARQCWGGW*SWSPVA Trigger: AGCAACCGGTGACCAAGATCACCAACCACCCCAGCA...CTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGATAAGGAGGCAGGGAGGTGCTCCTCCTGCTTCCTaGTGTCGTCATCTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PAPRCQARPCPMIRRQGGAPPAS*CRHLSP Trigger: TGGTGACAGATGACGACATCAGGAAGCAGGAGGAGC...ACCTCCCTGCCTCCTTATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGTGGTCCACTGCCTTCTaGGGGTCGCTCTTGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLGHCSSAFSVGLPARQWSTAF*GSLLTL Trigger: CAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCA...CTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCAGACTTGTGTACCAGCTCCTCCTaGTTCCTGATGTCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGPYLVQARLKAVCSPDLCTSSS*FLMSSS Trigger: AGATGACGACATCAGGAAGCAGGAGGAGCTGGTACA...CAAGTCTGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGTAACGTGCCAGTTGTaGCTTGCTGCGGAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CQAAQGQVSSRSTGAPCTVTCQL*LAAELL Trigger: AAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTAC...AGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTACCTTGTTGCTGGGGTaGTTGGTGATCTTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VSSRSTGAPCTETWKQEATLLLG*LVILVT Trigger: GGTGACCAAGATCACCAACCACCCCAGCAACAAGGT...AGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAACTTCCTCCAGCACCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGTAGAGCACTCGCAATaGCTGACAGCAGCGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKLPPAPNTAPSSSVPSKVEHSQ*LTAASH Trigger: ATGAGACGCTGCTGTCAGCCATTGCGAGTGCTCTAC...CTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTGCTGGAGGAAGTTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR TCA 90 bp | GAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGCAAGCTCCTCCACATaGGCTAGCATGTCGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EVTVSRWPLSWVTAHLLSASSST*ASMSAI Trigger: GATGGCCGACATGCTAGCTCATGTGGAGGAGCTTGC...TGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR GCA 90 bp | GTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGGTGCCAGTTGTGGCTTaGTGCGGAACTTCTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VTVSRWPLSWVTAHLLSVVPVVA*CGTSSR Trigger: GCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCAC...CACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGTTGCTTGAAGATGGATaGAGTCTGCCGTACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGAPCTETWKQEALERRWLLEDG*SLPYRQ Trigger: CTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAA...CCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS-3UTR GCA 90 bp | GTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGCTTGAAGATGGATaGAGTCTGCCGTACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSSRSTGAPCTETWKQEALLEDG*SLPYRQ Trigger: CTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAA...AGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS-3UTR GCA 90 bp | TACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCAATCTTGGTCACCGGTTaGTTGAAGATGGATGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YRSGPYLVQARLKAVCSPILVTG*LKMDAV Trigger: GACTGCATCCATCTTCAAGCAACCGGTGACCAAGAT...TGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR GCA 90 bp | TGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTATCTTGGTCACCGGTTaGTTGAAGATGGATGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CQAAQGQVSSRSTGAPCTILVTG*LKMDAV Trigger: GACTGCATCCATCTTCAAGCAACCGGTGACCAAGAT...AGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR GCA 90 bp | GGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTTGGTCCACTGCCTTCTaGGGGTCGCTCTTGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDCVQVASQLGHCSSAFSWSTAF*GSLLTL Trigger: CAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCA...ACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR GCA 90 bp | GAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCATTCTCCCAGAAAAGCTaGCTCGGCTGGTCCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVTVSRWPLSWVTAHLLSFSQKS*LGWSTA Trigger: GGCAGTGGACCAGCCGAGGCAGCTTTTCTGGGAGAA...TGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR GCA 90 bp | CAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGTTTGCACAGTGGCTGTaGAGTGTTCAGCCACACACC | + |
|
Preference number: 4 (lower is better) Translates to: QVSSRSTGAPCTETWKQEFAQWL*SVQPHT Trigger: GGTGTGTGGCTGAACACTGCACAGCCACTGTGCAAA...CTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR GCA 90 bp | CAGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTTGCACAGTGGCTGTaGAGTGTTCAGCCACACACC | + |
|
Preference number: 4 (lower is better) Translates to: QGGDCVQVASQLGHCSSAFAQWL*SVQPHT Trigger: GGTGTGTGGCTGAACACTGCACAGCCACTGTGCAAA...AGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGCAGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATGTACCAGCTCCTCCTaGTTCCTGATGTCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RRQGGDCVQVASQLGHCSCTSSS*FLMSSS Trigger: AGATGACGACATCAGGAAGCAGGAGGAGCTGGTACA...TGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTGCCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGGTAACGTGCCAGTTGTaGCTTGCTGCGGAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGAPCTETWKQEALERRWVTCQL*LAAELL Trigger: AAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTAC...CCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS-3UTR CCA 90 bp | AGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGACCTTGTTGCTGGGGTaGTTGGTGATCTTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSTGAPCTETWKQEALTLLLG*LVILVT Trigger: GGTGACCAAGATCACCAACCACCCCAGCAACAAGGT...CAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR GCA 90 bp | GTGGGCATAGCCAGGTGTGTTTCCAGAAACTTCCTCCAGCACCCAACACGGCTCTTTGCACAGTGGCTGTaGAGTGTTCAGCCACACACC | + |
|
Preference number: 4 (lower is better) Translates to: VGIARCVSRNFLQHPTRLFAQWL*SVQPHT Trigger: GGTGTGTGGCTGAACACTGCACAGCCACTGTGCAAA...GAGCCGTGTTGGGTGCTGGAGGAAGTTTCTGGAAACACACCTGGCTATGCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CCA 90 bp | CAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGTAGAGCACTCGCAATaGCTGACAGCAGCGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVASQLGHCSSAFSVGLPVEHSQ*LTAASH Trigger: ATGAGACGCTGCTGTCAGCCATTGCGAGTGCTCTAC...AGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR TCA 90 bp | GAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGGTCAGGCTTGCCCTTaGCCTGGTTGGAAGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVTVSRWPLSWVTAHLLSGQACP*PGWKNH Trigger: ATGATTCTTCCAACCAGGTCAAGGGCAAGCCTGACC...TGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 |
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| CDS-3UTR GCA 90 bp | GGCATAGCCAGGTGTGTTTCCAGAAACTTCCTCCAGCACCCAACACGGCTCCCATTGCTTGAAGATGGATaGAGTCTGCCGTACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIARCVSRNFLQHPTRLPLLEDG*SLPYRQ Trigger: CTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAA...TGGGAGCCGTGTTGGGTGCTGGAGGAAGTTTCTGGAAACACACCTGGCTATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 |
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| CDS-3UTR GCA 90 bp | TCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGATCTTGGTCACCGGTTaGTTGAAGATGGATGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVGSLLICFQCGASCQAAILVTG*LKMDAV Trigger: GACTGCATCCATCTTCAAGCAACCGGTGACCAAGAT...CGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR GCA 90 bp | GGCATAGCCAGGTGTGTTTCCAGAAACTTCCTCCAGCACCCAACACGGCTCCCATGTACCAGCTCCTCCTaGTTCCTGATGTCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GIARCVSRNFLQHPTRLPCTSSS*FLMSSS Trigger: AGATGACGACATCAGGAAGCAGGAGGAGCTGGTACA...TGGGAGCCGTGTTGGGTGCTGGAGGAAGTTTCTGGAAACACACCTGGCTATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CCA 90 bp | CAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGAACTTCTTCCCGCTaGGGCTATAGTAAAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QCGASCQAAQGQVSSRSTGTSSR*GYSKRH Trigger: ATGTCTTTTACTATAGCCCCAGCGGGAAGAAGTTCC...TGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAGGAAGCCCCACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
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| CDS-3UTR TCA 90 bp | TCACAAGTTCCTACCATCAGTTTATTGAAGGAAAGTGACTTCCTGGTGGGCTGCCGTCATCTGTCACCATaGAGGCTTTGCACAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQVPTISLLKESDFLVGCRHLSP*RLCTVA Trigger: AGCCACTGTGCAAAGCCTTCATGGTGACAGATGACG...GCAGCCCACCAGGAAGTCACTTTCCTTCAATAAACTGATGGTAGGAACTTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | GCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGCTGGGGTCCATGGAGGGTaGGAGGGGCCAGGGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: APCTETWKQEALERRWTAGVHGG*EGPGRC Trigger: GCACCTCCCTGGCCCCTCCAACCCTCCATGGACCCC...AGCCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105348.8 |
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| CDS TCA 90 bp | GCCTTGTCCAGTGGTGCCTCCCCGTCTCGGGCAAGCTCCTCCACATaGGCTAGCATGTCGGCCATCAGTGCCTCCTCCAGGCGCTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: ALSSGASPSRASSST*ASMSAISASSRRFR Trigger: ACGGAAGCGCCTGGAGGAGGCACTGATGGCCGACATGCTAGCTCATGTGGAGGAGCTTGCCCGAGACGGGGAGGCACCACTGGACAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS GCA 90 bp | TGGCTCCGGCTCTTCCTCCTCCTCTTCCTCCTCCTCTTCCTCCTCTaGACAGGCCTTGTCCAGTGGTGCCTCCCCGTCTCGGGCAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WLRLFLLLFLLLFLL*TGLVQWCLPVSGKL Trigger: GAGCTTGCCCGAGACGGGGAGGCACCACTGGACAAGGCCTGTGCAGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGCCGGAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS CCA 90 bp | TATAGTAAAAGACATCCCTGTGGCCGGCCGACAGCCCCGACCTCCTaGGCACTTCTTCCCTTTCCCAGCCCTGCGGGAGCGCCGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: YSKRHPCGRPTAPTS*ALLPFPSPAGAPGT Trigger: AGTGCCCGGCGCTCCCGCAGGGCTGGGAAAGGGAAGAAGTGCCCAGGAGGTCGGGGCTGTCGGCCGGCCACAGGGATGTCTTTTACTATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
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| CDS CCA 90 bp | GAAGGTGCTGAGGTCCATGGATCCGCCCAGGTAACGTGCCAGTTGTaGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTGCGGACGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGAEVHGSAQVTCQL*LAAELLPAGAADGR Trigger: CCTCCCGTCCGCAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105347.2 |
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| CDS GCA 90 bp | GCGGAAGTCGAAGGTGCTGAGGTCCATGGATCCGCCCAGGTAACGTaGCAGTTGTGGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AEVEGAEVHGSAQVT*QLWLAAELLPAGAA Trigger: CGCAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTCGACTTCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105347.2 |
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| CDS-3UTR CAA 90 bp | CAGCACCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGCGTGCCAGTTGTGGCTaGCTGCGGAACTTCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QHPTRLPAPRCQARPCPMRASCG*LRNFFP Trigger: CGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACG...CATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGGTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 |
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| CDS-3UTR CAA 90 bp | TGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTCGTGCCAGTTGTGGCTaGCTGCGGAACTTCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CQAAQGQVSSRSTGAPCTRASCG*LRNFFP Trigger: CGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACG...AGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS-3UTR CAA 90 bp | TACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCAGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YRSGPYLVQARLKAVCSPGSLLT*LLGWLV Trigger: CACCAACCACCCCAGCAACAAGGTCAAGAGCGACCC...TGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | TGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WVTAHLLSVWGFLPGSAGGSLLT*LLGWLV Trigger: CACCAACCACCCCAGCAACAAGGTCAAGAGCGACCC...CCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | TGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTTTCTGCGGGTCGCTCTaGACCTTGTTGCTGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CQAAQGQVSSRSTGAPCTFCGSL*TLLLGW Trigger: CCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA...AGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | AAAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAATTCTGCGGGTCGCTCTaGACCTTGTTGCTGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGGGRLPPTGLAPTWSRQFCGSL*TLLLGW Trigger: CCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA...TTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | AGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGGTCACCATGAAGGCTTaGCACAGTGGCTGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RWTAASYRSGPYLVQARLVTMKA*HSGCAV Trigger: CACTGCACAGCCACTGTGCAAAGCCTTCATGGTGAC...CAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS GCA 90 bp | GCGGAAGTCGAAGGTGCTGAGGTCCATGGATCCGCCCAGGTAACGTaGCAGTTGTGGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AEVEGAEVHGSAQVT*QLWLAAELLPAGAL Trigger: AAGAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTCGACTTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS CCA 90 bp | GAAGGTGCTGAGGTCCATGGATCCGCCCAGGTAACGTGCCAGTTGTaGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTCTTCCGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EGAEVHGSAQVTCQL*LAAELLPAGALPLH Trigger: ATGGAGCGGAAGAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGCAGGTAACGTGCCAGTaGTGGCTTGCTGCGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: KEVDGCLLQVWPLPGPGKQVTCQ*WLAAEL Trigger: AAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTG...CTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGTTGGTCACCGGTTGCTaGAAGATGGATGCAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RWTAASYRSGPYLVQARLLVTGC*KMDAVC Trigger: GCAGACTGCATCCATCTTCAAGCAACCGGTGACCAA...CAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCGGGTGGTTGGTGATCTaGGTCACCGGTTGCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AASYRSGPYLVQARLKAVGWLVI*VTGCLK Trigger: CTTCAAGCAACCGGTGACCAAGATCACCAACCACCC...GACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | AAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGTTGTTGCTGGGGTGGTaGGTGATCTTGGTCACCGGT | + |
|
Preference number: 5 (lower is better) Translates to: KEVDGCLLQVWPLPGPGKLLLGW*VILVTG Trigger: ACCGGTGACCAAGATCACCAACCACCCCAGCAACAA...CTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTTGTTGCTGGGGTGGTaGGTGATCTTGGTCACCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AASYRSGPYLVQARLKAVLLLGW*VILVTG Trigger: ACCGGTGACCAAGATCACCAACCACCCCAGCAACAA...GACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGGCAGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCAGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRQGGDCVQVASQLGHCSGSLLT*LLGWLV Trigger: CACCAACCACCCCAGCAACAAGGTCAAGAGCGACCC...TGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTGCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS GCA 90 bp | GCGGAAGTCGAAGGTGCTGAGGTCCATGGATCCGCCCAGGTAACGTaGCAGTTGTGGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: AEVEGAEVHGSAQVT*QLWLAAELLPAGAI Trigger: TATAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTCGACTTCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
||
| CDS GCA 90 bp | GCTGGGGTGGTTGGTGATCTTGGTCACCGGTTGCTTGAAGATGGATaGAGTCTGCCGTACAGGCAGCGCGGTGTTCAGGTCAGGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGVVGDLGHRLLEDG*SLPYRQRGVQVRLA Trigger: GGCAAGCCTGACCTGAACACCGCGCTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS GCA 90 bp | TGGTTGGTGATCTTGGTCACCGGTTGCTTGAAGATGGATGCAGTCTaGCGTACAGGCAGCGCGGTGTTCAGGTCAGGCTTGCCCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WLVILVTGCLKMDAV*RTGSAVFRSGLPWG Trigger: CCCCCAGGGCAAGCCTGACCTGAACACCGCGCTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105348.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGCAGGGACAAGTCGTGCCAGTTGTGGCTaGCTGCGGAACTTCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TAHLLSVWGFLPGSAGTSRASCG*LRNFFP Trigger: CGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACG...ACTTGTCCCTGCGCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTCAGGTAACGTGCCAGTaGTGGCTTGCTGCGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: CQAAQGQVSSRSTGAPCTQVTCQ*WLAAEL Trigger: AAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTG...AGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGCAGCGCAGGGACAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTTGGTCACCGGTTGCTaGAAGATGGATGCAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPGSAGTSEFKVHRGSLHLVTGC*KMDAVC Trigger: GCAGACTGCATCCATCTTCAAGCAACCGGTGACCAA...GTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTGTCCCTGCGCTGCCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | GACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCGATCTTGGTCACCGGTaGCTTGAAGATGGATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DGCLLQVWPLPGPGKAEGDLGHR*LEDGCS Trigger: ACTGCATCCATCTTCAAGCAACCGGTGACCAAGATC...GCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | TACAGGTCTGGCCCCTACCTGGTCCAGGCAAGGCTGAAGGCAGTCTGCAGCCCATCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: YRSGPYLVQARLKAVCSPSLLTL*LGWLVI Trigger: GATCACCAACCACCCCAGCAACAAGGTCAAGAGCGA...TGGGCTGCAGACTGCCTTCAGCCTTGCCTGGACCAGGTAGGGGCCAGACCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAATCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: KGGGRLPPTGLAPTWSRQSLLTL*LGWLVI Trigger: GATCACCAACCACCCCAGCAACAAGGTCAAGAGCGA...TTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTTTCTGCGGGTCGCTCTaGACCTTGTTGCTGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RQGGDCVQVASQLGHCSSFCGSL*TLLLGW Trigger: CCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA...AGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGTTCTGCGGGTCGCTCTaGACCTTGTTGCTGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QVSSRSTGAPCTETWKQEFCGSL*TLLLGW Trigger: CCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA...CTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGGAAAGGAGGTGGACGGGTCACCATGAAGGCTTaGCACAGTGGCTGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLPALRPGSRRLWKGGGRVTMKA*HSGCAV Trigger: CACTGCACAGCCACTGTGCAAAGCCTTCATGGTGAC...CCGTCCACCTCCTTTCCAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS CCA 90 bp | GTGTTCAGCCACACACCAGGGTTCTTCTCCACGGCTGCAGAGAGCTaGCCTGTAATGGGCAGGGTGCTGGTGTGTAGAGCACTCGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VFSHTPGFFSTAAES*PVMGRVLVCRALAM Trigger: CATTGCGAGTGCTCTACACACCAGCACCCTGCCCATTACAGGCCAGCTCTCTGCAGCCGTGGAGAAGAACCCTGGTGTGTGGCTGAACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAGATCTTGGTCACCGGTaGCTTGAAGATGGATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ERRWTAASYRSGPYLVQADLGHR*LEDGCS Trigger: ACTGCATCCATCTTCAAGCAACCGGTGACCAAGATC...TGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: VSSRSTGAPCTETWKQEASLLTL*LGWLVI Trigger: GATCACCAACCACCCCAGCAACAAGGTCAAGAGCGA...AGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: REVTVSRWPLSWVTAHLLGSLLT*LLGWLV Trigger: CACCAACCACCCCAGCAACAAGGTCAAGAGCGACCC...AAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | GCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGATAAGGAGGCAGGGGTCACCATGAAGGCTTaGCACAGTGGCTGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: APSSSVPSKALSYDKEAGVTMKA*HSGCAV Trigger: CACTGCACAGCCACTGTGCAAAGCCTTCATGGTGAC...CCCTGCCTCCTTATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAGGTGGACGGCTGCCTCCTACAGGTCTGGCCCCTACCTGGTCCAGGCAAGTGCTTAGCCAGAGCCTaGACCTGGTTGGAAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: KEVDGCLLQVWPLPGPGKCLARA*TWLEES Trigger: TGATTCTTCCAACCAGGTCAAGGCTCTGGCTAAGCA...CTTGCCTGGACCAGGTAGGGGCCAGACCTGTAGGAGGCAGCCGTCCACCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105348.8 |
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| CDS TCA 90 bp | CAGTCTGCCGTACAGGCAGCGCGGTGTTCAGGTCAGGCTTGCCCTTaGCCTGGTTGGAAGAATCATAGCGCACACGCTGGCGACTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: QSAVQAARCSGQACP*PGWKNHSAHAGDSY Trigger: ATAAGAGTCGCCAGCGTGTGCGCTATGATTCTTCCAACCAGGTCAAGGGCAAGCCTGACCTGAACACCGCGCTGCCTGTACGGCAGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105349.8 |
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| CDS GCA 90 bp | TGGTTGGTGATCTTGGTCACCGGTTGCTTGAAGATGGATGCAGTCTaGCGTACAGGCAGCGCGGTGTTCAGGTCAGGCTTGCCCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: WLVILVTGCLKMDAV*RTGSAVFRSGLPLT Trigger: GGTCAAGGGCAAGCCTGACCTGAACACCGCGCTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105349.8 |
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| CDS-3UTR CAA 90 bp | CAGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTGGGTGGTTGGTGATCTaGGTCACCGGTTGCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QGGDCVQVASQLGHCSSAGWLVI*VTGCLK Trigger: CTTCAAGCAACCGGTGACCAAGATCACCAACCACCC...AGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | CAAGTGAGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGGGTGGTTGGTGATCTaGGTCACCGGTTGCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVSSRSTGAPCTETWKQEGWLVI*VTGCLK Trigger: CTTCAAGCAACCGGTGACCAAGATCACCAACCACCC...CTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACTCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | CTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGCCAGGCAGCGGGTGGTTGGTGATCTaGGTCACCGGTTGCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSWVTAHLLSVWGFLPGSGWLVI*VTGCLK Trigger: CTTCAAGCAACCGGTGACCAAGATCACCAACCACCC...GCTGCCTGGCAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | AGTTCAAGGTCCACAGGGGCTCCCTGCACTGAGACCTGGAAGCAGGAGGCTTTGTTGTTGCTGGGGTGGTaGGTGATCTTGGTCACCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSRSTGAPCTETWKQEALLLLGW*VILVTG Trigger: ACCGGTGACCAAGATCACCAACCACCCCAGCAACAA...CAAAGCCTCCTGCTTCCAGGTCTCAGTGCAGGGAGCCCCTGTGGACCTTGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS TCA 90 bp | AGCCAGGGCCCACTCCCTGCAGGCCCTTGGGCAAGTCCATGGTCCTaGCCAGTTCTTCTGCAATGTCAAAGGCACTCAATCCACTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQGPLPAGPWASPWS*PVLLQCQRHSIHLA Trigger: AGCTAAGTGGATTGAGTGCCTTTGACATTGCAGAAGAACTGGTCAGGACCATGGACTTGCCCAAGGGCCTGCAGGGAGTGGGCCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS GCA 90 bp | CTCTTGACCTTGTTGCTGGGGTGGTTGGTGATCTTGGTCACCGGTTaGTTGAAGATGGATGCAGTCTGCCGTACAGGCAGCGCGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLTLLLGWLVILVTG*LKMDAVCRTGSAVF Trigger: GAACACCGCGCTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS CCA 90 bp | GAAGGTGCTGAGGTCCATGGATCCGCCCAGGTAACGTGCCAGTTGTaGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTATAGTAAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: EGAEVHGSAQVTCQL*LAAELLPAGAIVKD Trigger: GTCTTTTACTATAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
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| CDS CCA 90 bp | TGGTCCACTGCCTTCTGCGGGTCGCTCTTGACCTTGTTGCTGGGGTaGTTGGTGATCTTGGTCACCGGTTGCTTGAAGATGGATGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WSTAFCGSLLTLLLG*LVILVTGCLKMDAV Trigger: GACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | CCCAACACGGCTCCCAGCTCCTCGGTGCCAAGCAAGGCCTTGTCCTATGATAAGTTGGTCACCGGTTGCTaGAAGATGGATGCAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PNTAPSSSVPSKALSYDKLVTGC*KMDAVC Trigger: GCAGACTGCATCCATCTTCAAGCAACCGGTGACCAA...CTTATCATAGGACAAGGCCTTGCTTGGCACCGAGGAGCTGGGAGCCGTGTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS-3UTR CAA 90 bp | GGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCTTGTTGCTGGGGTGGTaGGTGATCTTGGTCACCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGDCVQVASQLGHCSSAFLLLGW*VILVTG Trigger: ACCGGTGACCAAGATCACCAACCACCCCAGCAACAA...GAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGGTGACTGTGTCCAGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: REVTVSRWPLSWVTAHLLSLLTL*LGWLVI Trigger: GATCACCAACCACCCCAGCAACAAGGTCAAGAGCGA...AAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCTGGACACAGTCACCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS GCA 90 bp | CCTGATGTCGTCATCTGTCACCATGAAGGCTTTGCACAGTGGCTGTaGAGTGTTCAGCCACACACCAGGGTTCTTCTCCACGGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PDVVICHHEGFAQWL*SVQPHTRVLLHGCR Trigger: TCTGCAGCCGTGGAGAAGAACCCTGGTGTGTGGCTGAACACTGCACAGCCACTGTGCAAAGCCTTCATGGTGACAGATGACGACATCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS TCA 90 bp | TCATCTTGTTCATCAACATCTTTCCGGTGCGGAAGTCGAAGGTGCTaGGGTCCATGGATCCGCCCAGGTAACGTGCCAGTTGTGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSSTSFRCGSRRC*GPWIRPGNVPVVAC Trigger: GCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTCGACTTCCGCACCGGAAAGATGTTGATGAACAAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGCCTCTCAGTTGGGTCACTGCTCATCTGCTTTCAGTGTGGGGCTTCCTGGATCTTGGTCACCGGTaGCTTGAAGATGGATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RWPLSWVTAHLLSVWGFLDLGHR*LEDGCS Trigger: ACTGCATCCATCTTCAAGCAACCGGTGACCAAGATC...CAGGAAGCCCCACACTGAAAGCAGATGAGCAGTGACCCAACTGAGAGGCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGGCATAGCCAGGTGTGTTTCCAGAAACTTCCTCCAGCACCCAACACGGGATCTTGGTCACCGGTaGCTTGAAGATGGATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KVGIARCVSRNFLQHPTRDLGHR*LEDGCS Trigger: ACTGCATCCATCTTCAAGCAACCGGTGACCAAGATC...CCGTGTTGGGTGCTGGAGGAAGTTTCTGGAAACACACCTGGCTATGCCCACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS-3UTR CAA 90 bp | TCACAAGTTCCTACCATCAGTTTATTGAAGGAAAGTGACTTCCTGGTGGGCTGCGTCACCATGAAGGCTTaGCACAGTGGCTGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQVPTISLLKESDFLVGCVTMKA*HSGCAV Trigger: CACTGCACAGCCACTGTGCAAAGCCTTCATGGTGAC...GCAGCCCACCAGGAAGTCACTTTCCTTCAATAAACTGATGGTAGGAACTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS GCA 72 bp | CCCGACCTCCTGGGCACTTCTTCCCTTTCCCAGCCCTaGGGGAGCGCCGGGCACTCCCACCTCTTCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PDLLGTSSLSQP*GSAGHSHLFRS Trigger: GGAGCGGAAGAGGTGGGAGTGCCCGGCGCTCCCGCAGGGCTGGGAAAGGGAAGAAGTGCCCAGGAGGTCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
||
| CDS CAA 72 bp | CTGCAGCGGGCCGCTCCGACCGGGGTCCATGGAGGGTaGGAGGGGCCAGGGAGGTGCTTAGCCAGAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LQRAAPTGVHGG*EGPGRCLARAL Trigger: CAAGGCTCTGGCTAAGCACCTCCCTGGCCCCTCCAACCCTCCATGGACCCCGGTCGGAGCGGCCCGCTGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105348.8 |
||
| CDS CCA 72 bp | AGACATCCCTGTGGCCGGCCGACAGCCCCGACCTCCTaGGCACTTCTTCCCTTTCCCAGCCCTGCGGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RHPCGRPTAPTS*ALLPFPSPAGA Trigger: CGCTCCCGCAGGGCTGGGAAAGGGAAGAAGTGCCCAGGAGGTCGGGGCTGTCGGCCGGCCACAGGGATGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
||
| CDS CCA 72 bp | GAAGACTCTGCAGCGGGCCGCTCCGACCGGGGTCCATaGAGGGTTGGAGGGGCCAGGGAGGTGCTTAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EDSAAGRSDRGP*RVGGAREVLSQ Trigger: CTGGCTAAGCACCTCCCTGGCCCCTCCAACCCTCCATGGACCCCGGTCGGAGCGGCCCGCTGCAGAGTCTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105348.8 |
||
| CDS CCA 72 bp | GTGCCAGTTGTGGCTTGCTGCGGAACTTCTTCCCGCTaGGGCTGCGGACGGGAGGCTGGTCAGCCCGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VPVVACCGTSSR*GCGREAGQPEQ Trigger: CTGCTCGGGCTGACCAGCCTCCCGTCCGCAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105347.2 |
||
| CDS GCA 72 bp | TGGATCCGCCCAGGTAACGTGCCAGTTGTGGCTTGCTaGGGAACTTCTTCCCGCTGGGGCTGCGGACGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WIRPGNVPVVAC*GTSSRWGCGRE Trigger: CTCCCGTCCGCAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105347.2 |
||
| CDS GCA 72 bp | CCATGGATCCGCCCAGGTAACGTGCCAGTTGTGGCTTaGTGCGGAACTTCTTCCCGCTGGGGCTGCGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: PWIRPGNVPVVA*CGTSSRWGCGR Trigger: CCGTCCGCAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105347.2 |
||
| CDS CAA 90 bp | GTCGAAGGTGCTGAGGTCCATGGATCCGCCCAGGTAACGTGCCAGTaGTGGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTGCGGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: VEGAEVHGSAQVTCQ*WLAAELLPAGAADG Trigger: CCCGTCCGCAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTCGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105347.2 |
||
| CDS TCA 72 bp | AGTGGTGCCTCCCCGTCTCGGGCAAGCTCCTCCACATaGGCTAGCATGTCGGCCATCAGTGCCTCCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGASPSRASSST*ASMSAISASSR Trigger: CCTGGAGGAGGCACTGATGGCCGACATGCTAGCTCATGTGGAGGAGCTTGCCCGAGACGGGGAGGCACCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS CCA 72 bp | GAGGTCCATGGATCCGCCCAGGTAACGTGCCAGTTGTaGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: EVHGSAQVTCQL*LAAELLPAGAA Trigger: CGCAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105347.2 |
||
| CDS CAA 72 bp | TCCTCTTCCTCCTCCTCTTCCTCCTCTGCACAGGCCTaGTCCAGTGGTGCCTCCCCGTCTCGGGCAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSSSAQA*SSGASPSRASS Trigger: GGAGCTTGCCCGAGACGGGGAGGCACCACTGGACAAGGCCTGTGCAGAGGAGGAAGAGGAGGAGGAAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS CAA 90 bp | GTCGAAGGTGCTGAGGTCCATGGATCCGCCCAGGTAACGTGCCAGTaGTGGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTCTTCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VEGAEVHGSAQVTCQ*WLAAELLPAGALPL Trigger: GAGCGGAAGAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS GCA 72 bp | CTCTTCCTCCTCCTCTTCCTCCTCCTCTTCCTCCTCTaGACAGGCCTTGTCCAGTGGTGCCTCCCCGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LFLLLFLLLFLL*TGLVQWCLPVS Trigger: CGAGACGGGGAGGCACCACTGGACAAGGCCTGTGCAGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS GCA 72 bp | TGGATCCGCCCAGGTAACGTGCCAGTTGTGGCTTGCTaGGGAACTTCTTCCCGCTGGGGCTCTTCCGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WIRPGNVPVVAC*GTSSRWGSSAP Trigger: TGGAGCGGAAGAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS GCA 72 bp | CCATGGATCCGCCCAGGTAACGTGCCAGTTGTGGCTTaGTGCGGAACTTCTTCCCGCTGGGGCTCTTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PWIRPGNVPVVA*CGTSSRWGSSA Trigger: AGCGGAAGAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS CAA 72 bp | GCTGAGGTCCATGGATCCGCCCAGGTAACGTGCCAGTaGTGGCTTGCTGCGGAACTTCTTCCCGCTGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AEVHGSAQVTCQ*WLAAELLPAGA Trigger: AGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS GCA 72 bp | ACCGGGGTCCATGGAGGGTTGGAGGGGCCAGGGAGGTaGTTAGCCAGAGCCTTGACCTGGTTGGAAGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: TGVHGGLEGPGR*LARALTWLEES Trigger: TGATTCTTCCAACCAGGTCAAGGCTCTGGCTAAGCACCTCCCTGGCCCCTCCAACCCTCCATGGACCCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105348.8 |
||
| CDS CCA 72 bp | GAGGTCCATGGATCCGCCCAGGTAACGTGCCAGTTGTaGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: EVHGSAQVTCQL*LAAELLPAGAL Trigger: AAGAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS CAA 72 bp | GGCTGGTCCACTGCCTTCTGCGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTGATCTTGGTCACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GWSTAFCGSLLT*LLGWLVILVTG Trigger: ACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS CAA 72 bp | TGCCTCGGCTGGTCCACTGCCTTCTGCGGGTCGCTCTaGACCTTGTTGCTGGGGTGGTTGGTGATCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CLGWSTAFCGSL*TLLLGWLVILV Trigger: GACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCAGCCGAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS CAA 90 bp | AGCTGCCTCGGCTGGTCCACTGCCTTCTGCGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTGATCTTGGTCACCGGTTGCTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SCLGWSTAFCGSLLT*LLGWLVILVTGCLK Trigger: CTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCAGCCGAGGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS CAA 90 bp | CAGAAAAGCTGCCTCGGCTGGTCCACTGCCTTCTGCGGGTCGCTCTaGACCTTGTTGCTGGGGTGGTTGGTGATCTTGGTCACCGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QKSCLGWSTAFCGSL*TLLLGWLVILVTGC Trigger: GCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCAGCCGAGGCAGCTTTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS TCA 72 bp | GTACAGGCAGCGCGGTGTTCAGGTCAGGCTTGCCCTTaGCCTGGTTGGAAGAATCATAGCGCACACGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VQAARCSGQACP*PGWKNHSAHAG Trigger: GCCAGCGTGTGCGCTATGATTCTTCCAACCAGGTCAAGGGCAAGCCTGACCTGAACACCGCGCTGCCTGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105349.8 |
||
| CDS GCA 72 bp | GAAGGTGCTGAGGTCCATGGATCCGCCCAGGTAACGTaGCAGTTGTGGCTTGCTGCGGAACTTCTTCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: EGAEVHGSAQVT*QLWLAAELLPA Trigger: AGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS GCA 72 bp | AGTGTTCAGCCACACACCAGGGTTCTTCTCCACGGCTaGAGAGAGCTGGCCTGTAATGGGCAGGGTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SVQPHTRVLLHG*RELACNGQGAG Trigger: ACCAGCACCCTGCCCATTACAGGCCAGCTCTCTGCAGCCGTGGAGAAGAACCCTGGTGTGTGGCTGAACACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS CCA 72 bp | GAGGTCCATGGATCCGCCCAGGTAACGTGCCAGTTGTaGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTATA | + |
|
Preference number: 6 (lower is better) Translates to: EVHGSAQVTCQL*LAAELLPAGAI Trigger: TATAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
||
| CDS CCA 72 bp | CACACACCAGGGTTCTTCTCCACGGCTGCAGAGAGCTaGCCTGTAATGGGCAGGGTGCTGGTGTGTAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HTPGFFSTAAES*PVMGRVLVCRA Trigger: TGCTCTACACACCAGCACCCTGCCCATTACAGGCCAGCTCTCTGCAGCCGTGGAGAAGAACCCTGGTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS CAA 72 bp | TGGTCCACTGCCTTCTGCGGGTCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTGATCTTGGTCACCGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WSTAFCGSLLTL*LGWLVILVTGC Trigger: GCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS CAA 90 bp | TGCCTCGGCTGGTCCACTGCCTTCTGCGGGTCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTGATCTTGGTCACCGGTTGCTTGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: CLGWSTAFCGSLLTL*LGWLVILVTGCLKM Trigger: CATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGACCAGCCGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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| CDS CAA 72 bp | TTGCTGGGGTGGTTGGTGATCTTGGTCACCGGTTGCTaGAAGATGGATGCAGTCTGCCGTACAGGCAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LLGWLVILVTGC*KMDAVCRTGSA Trigger: CGCGCTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS CAA 90 bp | GTCGAAGGTGCTGAGGTCCATGGATCCGCCCAGGTAACGTGCCAGTaGTGGCTTGCTGCGGAACTTCTTCCCGCTGGGGCTATAGTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VEGAEVHGSAQVTCQ*WLAAELLPAGAIVK Trigger: TTTTACTATAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
||
| CDS CAA 90 bp | TTGACCTTGTTGCTGGGGTGGTTGGTGATCTTGGTCACCGGTTGCTaGAAGATGGATGCAGTCTGCCGTACAGGCAGCGCGGTGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTLLLGWLVILVTGC*KMDAVCRTGSAVFR Trigger: CCTGAACACCGCGCTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS CAA 90 bp | GCTCTTGACCTTGTTGCTGGGGTGGTTGGTGATCTTGGTCACCGGTaGCTTGAAGATGGATGCAGTCTGCCGTACAGGCAGCGCGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ALDLVAGVVGDLGHR*LEDGCSLPYRQRGV Trigger: AACACCGCGCTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS CAA 90 bp | TTCTGCGGGTCGCTCTTGACCTTGTTGCTGGGGTGGTTGGTGATCTaGGTCACCGGTTGCTTGAAGATGGATGCAGTCTGCCGTACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FCGSLLTLLLGWLVI*VTGCLKMDAVCRTG Trigger: GCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
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| CDS CAA 90 bp | TCCACTGCCTTCTGCGGGTCGCTCTTGACCTTGTTGCTGGGGTGGTaGGTGATCTTGGTCACCGGTTGCTTGAAGATGGATGCAGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: STAFCGSLLTLLLGW*VILVTGCLKMDAVC Trigger: GCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS GCA 72 bp | CCATGGATCCGCCCAGGTAACGTGCCAGTTGTGGCTTaGTGCGGAACTTCTTCCCGCTGGGGCTATAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: PWIRPGNVPVVA*CGTSSRWGYSK Trigger: TTTACTATAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
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| CDS GCA 72 bp | ATCTTGGTCACCGGTTGCTTGAAGATGGATGCAGTCTaGCGTACAGGCAGCGCGGTGTTCAGGTCAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ILVTGCLKMDAV*RTGSAVFRSGL Trigger: CAAGCCTGACCTGAACACCGCGCTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS GCA 72 bp | GTTGGTGATCTTGGTCACCGGTTGCTTGAAGATGGATaGAGTCTGCCGTACAGGCAGCGCGGTGTTCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VGDLGHRLLEDG*SLPYRQRGVQV Trigger: GACCTGAACACCGCGCTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS CCA 72 bp | GCCTTCTGCGGGTCGCTCTTGACCTTGTTGCTGGGGTaGTTGGTGATCTTGGTCACCGGTTGCTTGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: AFCGSLLTLLLG*LVILVTGCLKM Trigger: CATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS TCA 72 bp | TCATCAACATCTTTCCGGTGCGGAAGTCGAAGGTGCTaGGGTCCATGGATCCGCCCAGGTAACGTGCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSTSFRCGSRRC*GPWIRPGNVPV Trigger: AACTGGCACGTTACCTGGGCGGATCCATGGACCTCAGCACCTTCGACTTCCGCACCGGAAAGATGTTGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS GCA 72 bp | TGGATCCGCCCAGGTAACGTGCCAGTTGTGGCTTGCTaGGGAACTTCTTCCCGCTGGGGCTATAGTAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WIRPGNVPVVAC*GTSSRWGYSKR Trigger: TCTTTTACTATAGCCCCAGCGGGAAGAAGTTCCGCAGCAAGCCACAACTGGCACGTTACCTGGGCGGATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092295.10 |
||
| CDS GCA 72 bp | TTGTTGCTGGGGTGGTTGGTGATCTTGGTCACCGGTTaGTTGAAGATGGATGCAGTCTGCCGTACAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLGWLVILVTG*LKMDAVCRTGS Trigger: GCTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS CAA 72 bp | CTTGTTGCTGGGGTGGTTGGTGATCTTGGTCACCGGTaGCTTGAAGATGGATGCAGTCTGCCGTACAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LVAGVVGDLGHR*LEDGCSLPYRQ Trigger: CTGCCTGTACGGCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 |
||
| CDS CAA 90 bp | AGCTCCTCCTGCTTCCTGATGTCGTCATCTGTCACCATGAAGGCTTaGCACAGTGGCTGTGCAGTGTTCAGCCACACACCAGGGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSCFLMSSSVTMKA*HSGCAVFSHTPGFF Trigger: GAAGAACCCTGGTGTGTGGCTGAACACTGCACAGCCACTGTGCAAAGCCTTCATGGTGACAGATGACGACATCAGGAAGCAGGAGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS CAA 72 bp | TCGCTCTTGACCTTGTTGCTGGGGTGGTTGGTGATCTaGGTCACCGGTTGCTTGAAGATGGATGCAGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLLTLLLGWLVI*VTGCLKMDAVC Trigger: GCAGACTGCATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS CAA 72 bp | TTCTGCGGGTCGCTCTTGACCTTGTTGCTGGGGTGGTaGGTGATCTTGGTCACCGGTTGCTTGAAGATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FCGSLLTLLLGW*VILVTGCLKMD Trigger: ATCCATCTTCAAGCAACCGGTGACCAAGATCACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
||
| CDS CAA 72 bp | TGCTTCCTGATGTCGTCATCTGTCACCATGAAGGCTTaGCACAGTGGCTGTGCAGTGTTCAGCCACACACCA | + |
|
Preference number: 6 (lower is better) Translates to: CFLMSSSVTMKA*HSGCAVFSHTP Trigger: TGGTGTGTGGCTGAACACTGCACAGCCACTGTGCAAAGCCTTCATGGTGACAGATGACGACATCAGGAAGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092295.10 ENSMUST00000105347.2 ENSMUST00000105348.8 ENSMUST00000105349.8 ENSMUST00000142997.8 |
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