Pregenerated sensors for MB21D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051065Ensembl transcript IDs: ENSMUST00000100023.3
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGGAGGAGATGTGTTCCCCCAAACCCACCAACAAATCTACACTaGGTGTGGGACAGAAAGCAAGCAAGAGGATTCGTGGGCAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: ARRRCVPPNPPTNLH*VWDRKQARGFVGSV Trigger: GACACTGCCCACGAATCCTCTTGCTTGCTTTCTGTCCCACACCCAGTGTAGATTTGTTGGTGGGTTTGGGGGAACACATCTCCTCCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CCA 90 bp | AGGAGATGTGTTCCCCCAAACCCACCAACAAATCTACACTGGGTGTaGGACAGAAAGCAAGCAAGAGGATTCGTGGGCAGTGTCGTCTAT | + |
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Preference number: 1 (lower is better) Translates to: RRCVPPNPPTNLHWV*DRKQARGFVGSVVY Trigger: ATAGACGACACTGCCCACGAATCCTCTTGCTTGCTTTCTGTCCCACACCCAGTGTAGATTTGTTGGTGGGTTTGGGGGAACACATCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR TCA 90 bp | TATGAGTCTGGACACTCAAGACCAAAACAGCCACTGTTGCTTGCTTaGCTCTTCCATCAGCAGACATCATCGGTGTCATCTATGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: YESGHSRPKQPLLLA*LFHQQTSSVSSMSA Trigger: TGCTGACATAGATGACACCGATGATGTCTGCTGATGGAAGAGTCAAGCAAGCAACAGTGGCTGTTTTGGTCTTGAGTGTCCAGACTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR GCA 90 bp | ACCTGCTTTGAACAGGCATGGTTATCTTCAATCTGGGAACAATTCTaGCTGTCAGTTTCCCTCAAGATCTCAGGAGACGTAAAGGGACTT | + |
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Preference number: 1 (lower is better) Translates to: TCFEQAWLSSIWEQF*LSVSLKISGDVKGL Trigger: AAGTCCCTTTACGTCTCCTGAGATCTTGAGGGAAACTGACAGGCAGAATTGTTCCCAGATTGAAGATAACCATGCCTGTTCAAAGCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CCA 90 bp | CACCCACTTGATCAAGTATTATCTCCTATCTCCCCCAGCTTCAGATaGTCAGTGAATAGGTATAAAGCTTTAAGAACTCCCCTCAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: HPLDQVLSPISPSFR*SVNRYKALRTPLSK Trigger: CTTACTGAGGGGAGTTCTTAAAGCTTTATACCTATTCACTGACCATCTGAAGCTGGGGGAGATAGGAGATAATACTTGATCAAGTGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CCA 90 bp | CATTACATTAATTCCCATGCAAAACTCCAAGAGCCTGATTCCAACTaGCCAAAATCCAACCTATATGAGTCTGGACACTCAAGACCAAAA | + |
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Preference number: 1 (lower is better) Translates to: HYINSHAKLQEPDSN*PKSNLYESGHSRPK Trigger: TTTTGGTCTTGAGTGTCCAGACTCATATAGGTTGGATTTTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGAATTAATGTAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CAA 90 bp | ACCTATATGAGTCTGGACACTCAAGACCAAAACAGCCACTGTTGCTaGCTTGACTCTTCCATCAGCAGACATCATCGGTGTCATCTATGT | + |
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Preference number: 2 (lower is better) Translates to: TYMSLDTQDQNSHCC*LDSSISRHHRCHLC Trigger: ACATAGATGACACCGATGATGTCTGCTGATGGAAGAGTCAAGCAAGCAACAGTGGCTGTTTTGGTCTTGAGTGTCCAGACTCATATAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR-3UTR CCA 90 bp | AGCATTACATTAATTCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAAGCAAGAGGATTCGTaGGCAGTGTCGTCTATGGCT | + |
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Preference number: 2 (lower is better) Translates to: SITLIPMQNSKSLIPTGQKQEDS*AVSSMA Trigger: AGCCATAGACGACACTGCCCACGAATCCTCTTGCTT...TTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGAATTAATGTAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR-3UTR TCA 90 bp | TCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAATCCAACCTATATAAGGGGAAACTGTTCTaGCTGCTGGTGCAAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SHAKLQEPDSNWPKSNLYKGKLF*LLVQRN Trigger: ATTTCTTTGCACCAGCAGTCAGAACAGTTTCCCCTT...ATATAGGTTGGATTTTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR-3UTR CCA 90 bp | TTAGGACTCTCAGTGAAAACTCGGGAGAAGAACGAGGTCAAAGACAGAACATCAAATCTACACTGGGTGTaGGACAGAAAGCAAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: LGLSVKTREKNEVKDRTSNLHWV*DRKQAR Trigger: TCTTGCTTGCTTTCTGTCCCACACCCAGTGTAGATT...TGATGTTCTGTCTTTGACCTCGTTCTTCTCCCGAGTTTTCACTGAGAGTCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR-3UTR CCA 90 bp | TTATCTCCTATCTCCCCCAGCTTCAGATGGTCAGTGAATAGGTATAAAGCTTTACCAGAGAGATGTCAATaGACGCTAAAACACACATCG | + |
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Preference number: 2 (lower is better) Translates to: LSPISPSFRWSVNRYKALPERCQ*TLKHTS Trigger: CGATGTGTGTTTTAGCGTCCATTGACATCTCTCTGG...TAAAGCTTTATACCTATTCACTGACCATCTGAAGCTGGGGGAGATAGGAGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CAA 90 bp | TCTGTTTGGAAAGCTATCAAACCCTCCCTCCAAACCATCCAATGTTaGCTGATTCGAGAACAATTACATTCAATGAGGTTGCTCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: SVWKAIKPSLQTIQC*LIREQLHSMRLLRN Trigger: GTTTCTGAGCAACCTCATTGAATGTAATTGTTCTCGAATCAGCAAACATTGGATGGTTTGGAGGGAGGGTTTGATAGCTTTCCAAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR GCA 72 bp | GTCAGCAGGGCCGTCCACGACTCAAGCACCACGGTTTaGCTTGAGTTCACACCCAAACAGGGGCCAACACAC | + |
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Preference number: 3 (lower is better) Translates to: VSRAVHDSSTTV*LEFTPKQGPTH Trigger: GTGTGTTGGCCCCTGTTTGGGTGTGAACTCAAGGCAAACCGTGGTGCTTGAGTCGTGGACGGCCCTGCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR GCA 72 bp | TGTCTCGTAGAAAGGGGAAACTGTTCTGACTGCTGGTaGAAAGAAATAAACGCAGCCAGCATGCACAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: CLVERGNCSDCW*KEINAASMHRA Trigger: GGCCCTGTGCATGCTGGCTGCGTTTATTTCTTTGCACCAGCAGTCAGAACAGTTTCCCCTTTCTACGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CCA 72 bp | AGATGTGTTCCCCCAAACCCACCAACAAATCTACACTaGGTGTGGGACAGAAAGCAAGCAAGAGGATTCGTG | + |
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Preference number: 3 (lower is better) Translates to: RCVPPNPPTNLH*VWDRKQARGFV Trigger: CACGAATCCTCTTGCTTGCTTTCTGTCCCACACCCAGTGTAGATTTGTTGGTGGGTTTGGGGGAACACATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CCA 72 bp | CCATGTCTCGTAGAAAGGGGAAACTGTTCTGACTGCTaGTGCAAAGAAATAAACGCAGCCAGCATGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: PCLVERGNCSDC*CKEINAASMHR Trigger: CCTGTGCATGCTGGCTGCGTTTATTTCTTTGCACCAGCAGTCAGAACAGTTTCCCCTTTCTACGAGACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR TCA 72 bp | GGACACTCAAGACCAAAACAGCCACTGTTGCTTGCTTaGCTCTTCCATCAGCAGACATCATCGGTGTCATCT | + |
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Preference number: 3 (lower is better) Translates to: GHSRPKQPLLLA*LFHQQTSSVSS Trigger: AGATGACACCGATGATGTCTGCTGATGGAAGAGTCAAGCAAGCAACAGTGGCTGTTTTGGTCTTGAGTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR GCA 72 bp | AACATCAGCCGAAGAGGAAGAGAATGTGTTCAAATATaGCAGGAGGAGATGTGTTCCCCCAAACCCACCAAC | + |
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Preference number: 3 (lower is better) Translates to: NISRRGRECVQI*QEEMCSPKPTN Trigger: GTTGGTGGGTTTGGGGGAACACATCTCCTCCTGGCATATTTGAACACATTCTCTTCCTCTTCGGCTGATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CCA 72 bp | ACTCCCTTCTTCCAACAGAGCTACCTAGGTATTTCCTaGTTCCTGCTCTACAGTGACACCTGCTTTGAACAG | + |
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Preference number: 3 (lower is better) Translates to: TPFFQQSYLGIS*FLLYSDTCFEQ Trigger: CTGTTCAAAGCAGGTGTCACTGTAGAGCAGGAACCAGGAAATACCTAGGTAGCTCTGTTGGAAGAAGGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR GCA 72 bp | TTTCCATGTCTCGTAGAAAGGGGAAACTGTTCTGACTaGTGGTGCAAAGAAATAAACGCAGCCAGCATGCAC | + |
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Preference number: 3 (lower is better) Translates to: FPCLVERGNCSD*WCKEINAASMH Trigger: GTGCATGCTGGCTGCGTTTATTTCTTTGCACCAGCAGTCAGAACAGTTTCCCCTTTCTACGAGACATGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR TCA 72 bp | GAAGTTTCCATGTCTCGTAGAAAGGGGAAACTGTTCTaGCTGCTGGTGCAAAGAAATAAACGCAGCCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: EVSMSRRKGKLF*LLVQRNKRSQH Trigger: ATGCTGGCTGCGTTTATTTCTTTGCACCAGCAGTCAGAACAGTTTCCCCTTTCTACGAGACATGGAAACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR GCA 72 bp | GAACAGGCATGGTTATCTTCAATCTGGGAACAATTCTaGCTGTCAGTTTCCCTCAAGATCTCAGGAGACGTA | + |
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Preference number: 3 (lower is better) Translates to: EQAWLSSIWEQF*LSVSLKISGDV Trigger: TACGTCTCCTGAGATCTTGAGGGAAACTGACAGGCAGAATTGTTCCCAGATTGAAGATAACCATGCCTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CCA 72 bp | GACACCTGCTTTGAACAGGCATGGTTATCTTCAATCTaGGAACAATTCTGCCTGTCAGTTTCCCTCAAGATC | + |
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Preference number: 3 (lower is better) Translates to: DTCFEQAWLSSI*EQFCLSVSLKI Trigger: GATCTTGAGGGAAACTGACAGGCAGAATTGTTCCCAGATTGAAGATAACCATGCCTGTTCAAAGCAGGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CCA 72 bp | TTCCTGCTCTACAGTGACACCTGCTTTGAACAGGCATaGTTATCTTCAATCTGGGAACAATTCTGCCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: FLLYSDTCFEQA*LSSIWEQFCLS Trigger: TGACAGGCAGAATTGTTCCCAGATTGAAGATAACCATGCCTGTTCAAAGCAGGTGTCACTGTAGAGCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR-3UTR CAA 90 bp | AGCATTACATTAATTCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAACTCTCTCTCTCTCTCTaGAAGTTTCCATGTCTCGTA | + |
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Preference number: 3 (lower is better) Translates to: SITLIPMQNSKSLIPTGQLSLSL*KFPCLV Trigger: TACGAGACATGGAAACTTCAAGAGAGAGAGAGAGAG...TTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGAATTAATGTAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR GCA 72 bp | AATAGTAATAATACTGTTTCAGAGCCCGCACCATCCTaGAGAACCTGTGTTCTTACCAAGTCCAATGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: NSNNTVSEPAPS*RTCVLTKSNVS Trigger: GCTAACATTGGACTTGGTAAGAACACAGGTTCTGCAGGATGGTGCGGGCTCTGAAACAGTATTATTACTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CCA 72 bp | GATCAAGTATTATCTCCTATCTCCCCCAGCTTCAGATaGTCAGTGAATAGGTATAAAGCTTTAAGAACTCCC | + |
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Preference number: 3 (lower is better) Translates to: DQVLSPISPSFR*SVNRYKALRTP Trigger: GGGAGTTCTTAAAGCTTTATACCTATTCACTGACCATCTGAAGCTGGGGGAGATAGGAGATAATACTTGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CCA 72 bp | ACACTAAAACTAACATTTGGAAACCTTAATTCTGTTTaGAAAGCTATCAAACCCTCCCTCCAAACCATCCAA | + |
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Preference number: 3 (lower is better) Translates to: TLKLTFGNLNSV*KAIKPSLQTIQ Trigger: TTGGATGGTTTGGAGGGAGGGTTTGATAGCTTTCCAAACAGAATTAAGGTTTCCAAATGTTAGTTTTAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CCA 90 bp | AGGGGAAACTGTTCTGACTGCTGGTGCAAAGAAATAAACGCAGCCAGCATGCACGGGAGGGGATGCTGGTaGTGCTGCCCCGACGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RGNCSDCWCKEINAASMHGRGCW*CCPDAG Trigger: TCCAGCGTCGGGGCAGCACCACCAGCATCCCCTCCC...GTGCATGCTGGCTGCGTTTATTTCTTTGCACCAGCAGTCAGAACAGTTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR TCA 90 bp | TGGGACAGAAAGCAAGCAAGAGGATTCGTGGGCAGTGTCGTCTATGGCTCAAGTCCCGAGCTCCAGACCTaGAATCCAGCTCCGGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: WDRKQARGFVGSVVYGSSPELQT*NPAPGR Trigger: CCTTCCCGGAGCTGGATTTCAGGTCTGGAGCTCGGG...ACTTGAGCCATAGACGACACTGCCCACGAATCCTCTTGCTTGCTTTCTGTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR TCA 90 bp | AGGACTCTCAGTGAAAACTCGGGAGAAGAACGAGGTCAAAGACAGAACATCAGCTCCATGAGCCAGCTCTaGGCCACCGCGGGCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RTLSENSGEERGQRQNISSMSQL*ATAGQP Trigger: AGGCTGGCCCGCGGTGGCTCAGAGCTGGCTCATGGA...GCTGATGTTCTGTCTTTGACCTCGTTCTTCTCCCGAGTTTTCACTGAGAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | AGGGGAAACTGTTCTGACTGCTGGTGCAAAGAAATAAACGCAGCCAGCATGCACCGTGCTCAATGGCGGTaGGCAGGTGCTCTGCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: RGNCSDCWCKEINAASMHRAQWR*AGALRD Trigger: ATCCCGCAGAGCACCTGCGCACCGCCATTGAGCACG...GTGCATGCTGGCTGCGTTTATTTCTTTGCACCAGCAGTCAGAACAGTTTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR TCA 90 bp | AGGGGAAACTGTTCTGACTGCTGGTGCAAAGAAATAAACGCAGCCAGCATGCACCCTCATCAAAGAGCCTaGGGCTCAGCCAGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RGNCSDCWCKEINAASMHPHQRA*GSARSG Trigger: GCCACTCCTGGCTGAGCCTCAGGCTCTTTGATGAGG...GTGCATGCTGGCTGCGTTTATTTCTTTGCACCAGCAGTCAGAACAGTTTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR TCA 90 bp | GCAAGCAAGAGGATTCGTGGGCAGTGTCGTCTATGGCTCAAGTTCTCCTTTAAAAGACGGTCATCAGGCTaGTTGGGGTCCCCGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: ASKRIRGQCRLWLKFSFKRRSSG*LGSPPS Trigger: GGATGGCGGGGACCCCAATCAGCCTGATGACCGTCT...TTTAAAGGAGAACTTGAGCCATAGACGACACTGCCCACGAATCCTCTTGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CCA 90 bp | TCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAATCCAACCTATATGGGAGGCTGCCTTGCTaGCGGTGGGAGCCGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: SHAKLQEPDSNWPKSNLYGRLPC*RWEPPS Trigger: AGATGGCGGCTCCCACCGCCAGCAAGGCAGCCTCCC...ATATAGGTTGGATTTTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CCA 90 bp | AGGGGAAACTGTTCTGACTGCTGGTGCAAAGAAATAAACGCAGCCAGCATGCACGGTCATCAGGCTGATTaGGGTCCCCGCCATCCGACT | + |
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Preference number: 4 (lower is better) Translates to: RGNCSDCWCKEINAASMHGHQAD*GPRHPT Trigger: AGTCGGATGGCGGGGACCCCAATCAGCCTGATGACC...GTGCATGCTGGCTGCGTTTATTTCTTTGCACCAGCAGTCAGAACAGTTTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | AGGACTCTCAGTGAAAACTCGGGAGAAGAACGAGGTCAAAGACAGAACATCAGCAGGCAGGCTTGTTGTTaGAGCCCAGGGAGGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RTLSENSGEERGQRQNISRQACC*SPGRLP Trigger: AGGCAGCCTCCCTGGGCTGCAACAACAAGCCTGCCT...GCTGATGTTCTGTCTTTGACCTCGTTCTTCTCCCGAGTTTTCACTGAGAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | CCACCAACAAATCTACACTGGGTGTGGGACAGAAAGCAAGCAAGAGGATTCGTGAGGCCCAGAGCATCATaGTCCGCAGGTGATAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PPTNLHWVWDRKQARGFVRPRAS*SAGDKG Trigger: GCCCTTATCACCTGCGGAGCATGATGCTCTGGGCCT...CACGAATCCTCTTGCTTGCTTTCTGTCCCACACCCAGTGTAGATTTGTTGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | TCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAATCCAACCTATATATGGCGGTGCGCAGGTaGTCTGCGGGATCGGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: SHAKLQEPDSNWPKSNLYMAVRR*SAGSER Trigger: TCGCTCCGATCCCGCAGAGCACCTGCGCACCGCCAT...ATATAGGTTGGATTTTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CCA 90 bp | TCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAATCCAACCTATATCCCGCCATCCGACTGTaGGGAGGGGATGCTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SHAKLQEPDSNWPKSNLYPAIRL*GGDAGG Trigger: ACCACCAGCATCCCCTCCCCACAGTCGGATGGCGGG...ATATAGGTTGGATTTTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | ATCAGCCGAAGAGGAAGAGAATGTGTTCAAATATGCCAGGAGGAGATGTGTTCCTTGGCTGCCTTCACGTaGTCAATGGCGGTGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ISRRGRECVQICQEEMCSLAAFT*SMAVRR Trigger: CCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAA...GGAACACATCTCCTCCTGGCATATTTGAACACATTCTCTTCCTCTTCGGCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | AGGACTCTCAGTGAAAACTCGGGAGAAGAACGAGGTCAAAGACAGAACATCAGCCGTCAGCCGATTGGCTaGCTTCACGTGCTCAATGGC | + |
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Preference number: 4 (lower is better) Translates to: RTLSENSGEERGQRQNISRQPIG*LHVLNG Trigger: GCCATTGAGCACGTGAAGGCAGCCAATCGGCTGACG...GCTGATGTTCTGTCTTTGACCTCGTTCTTCTCCCGAGTTTTCACTGAGAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CCA 90 bp | GCAAGCAAGAGGATTCGTGGGCAGTGTCGTCTATGGCTCAAGTTCTCCTTTAAAGTTGTACCTCGCTCCTaGCGAAGGACAGTCGCCACT | + |
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Preference number: 4 (lower is better) Translates to: ASKRIRGQCRLWLKFSFKVVPRS*RRTVAT Trigger: AGTGGCGACTGTCCTTCGCCAGGAGCGAGGTACAAC...TTTAAAGGAGAACTTGAGCCATAGACGACACTGCCCACGAATCCTCTTGCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR TCA 90 bp | AGGACTCTCAGTGAAAACTCGGGAGAAGAACGAGGTCAAAGACAGAACATCAGCGTGGCACCGTTGATGTaGTCGGCGATTGTGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: RTLSENSGEERGQRQNISVAPLM*SAIVQQ Trigger: TTGCTGCACAATCGCCGATCACATCAACGGTGCCAC...GCTGATGTTCTGTCTTTGACCTCGTTCTTCTCCCGAGTTTTCACTGAGAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | AAAAACAGAACGACAGTCACAAATCACACTACACGGTACGTAAATTTTAGAACCCCAGGGAGGCTGCCTTaGTGGCGGTGGGAGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: KNRTTVTNHTTRYVNFRTPGRLP*WRWEPP Trigger: TGGCGGCTCCCACCGCCAGCAAGGCAGCCTCCCTGG...GGTTCTAAAATTTACGTACCGTGTAGTGTGATTTGTGACTGTCGTTCTGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | CCACCAACAAATCTACACTGGGTGTGGGACAGAAAGCAAGCAAGAGGATTCGTGTTGTTGACCAGGCAGTaGTGCAGGTCGTCAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: PPTNLHWVWDRKQARGFVLLTRQ*CRSSMR Trigger: CCTCATTGACGACCTGCAGCACTGCCTGGTCAACAA...CACGAATCCTCTTGCTTGCTTTCTGTCCCACACCCAGTGTAGATTTGTTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | AACGGGACCCACAATGAAAGGAGAACTAGACAAAATGTAGAGACTCATCCTACTGGATGCTGGTGGTGCTaGCCCGACGCTGGAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: NGTHNERRTRQNVETHPTGCWWC*PDAGAS Trigger: TGAAGCTCCAGCGTCGGGGCAGCACCACCAGCATCC...AGTAGGATGAGTCTCTACATTTTGTCTAGTTCTCCTTTCATTGTGGGTCCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CCA 90 bp | TTATCTCCTATCTCCCCCAGCTTCAGATGGTCAGTGAATAGGTATAAAGCTTTAAGGCTCAGCCAGGAGTaGCACAGGGCTGAGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPISPSFRWSVNRYKALRLSQE*HRAEWR Trigger: GCGCCACTCAGCCCTGTGCCACTCCTGGCTGAGCCT...TAAAGCTTTATACCTATTCACTGACCATCTGAAGCTGGGGGAGATAGGAGATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR CCA 90 bp | TGGGACAGAAAGCAAGCAAGAGGATTCGTGGGCAGTGTCGTCTATGGCTCAAGTTTCGGCATCCCTCTCTaGGGTTTCTTCTGTATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WDRKQARGFVGSVVYGSSFGIPL*GFFCIS Trigger: GGAGATACAGAAGAAACCCCAGAGAGGGATGCCGAA...ACTTGAGCCATAGACGACACTGCCCACGAATCCTCTTGCTTGCTTTCTGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR CCA 90 bp | CACCCACTTGATCAAGTATTATCTCCTATCTCCCCCAGCTTCAGATGGTCAGTGCTTGAGCCAAGTAGCTaGCAGGGAGTCGATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPLDQVLSPISPSFRWSVLEPSS*QGVDHR Trigger: CCTGTGATCGACTCCCTGCCAGCTACTTGGCTCAAG...CACTGACCATCTGAAGCTGGGGGAGATAGGAGATAATACTTGATCAAGTGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR GCA 90 bp | CACCCACTTGATCAAGTATTATCTCCTATCTCCCCCAGCTTCAGATGGTCAGTGTATTCCCGCTGGTCGTaGCTGGTGAATTCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HPLDQVLSPISPSFRWSVYSRWS*LVNSWM Trigger: CATCCAGGAATTCACCAGGCACGACCAGCGGGAATA...CACTGACCATCTGAAGCTGGGGGAGATAGGAGATAATACTTGATCAAGTGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR CCA 90 bp | AGGACTCTCAGTGAAAACTCGGGAGAAGAACGAGGTCAAAGACAGAACATCAGCTCGAGCGTCACAGGCTaGTTACGGTCATGCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTLSENSGEERGQRQNISSSVTG*LRSCSL Trigger: TAAGCTGCATGACCGTAACCAGCCTGTGACGCTCGA...GCTGATGTTCTGTCTTTGACCTCGTTCTTCTCCCGAGTTTTCACTGAGAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR CCA 90 bp | TCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAATCCAACCTATATTGGCACAGGGCTGAGTaGCGCATATCGAGCGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SHAKLQEPDSNWPKSNLYWHRAE*RISSVT Trigger: TGTGACGCTCGATATGCGCCACTCAGCCCTGTGCCA...ATATAGGTTGGATTTTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR CCA 90 bp | CCACCAACAAATCTACACTGGGTGTGGGACAGAAAGCAAGCAAGAGGATTCGTGACCAGTCAGCCACTTTaGTGGGGGAGAAGAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPTNLHWVWDRKQARGFVTSQPL*WGRRSS Trigger: ACTACTTCTTCTCCCCCACCAAAGTGGCTGACTGGT...CACGAATCCTCTTGCTTGCTTTCTGTCCCACACCCAGTGTAGATTTGTTGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR TCA 90 bp | TCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAATCCAACCTATATAAAAGTGGTTCTCCATaGGCCAGCTCTGAGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SHAKLQEPDSNWPKSNLYKSGSP*ASSEPP Trigger: CGGTGGCTCAGAGCTGGCTCATGGAGAACCACTTTT...ATATAGGTTGGATTTTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR GCA 90 bp | AGGACTCTCAGTGAAAACTCGGGAGAAGAACGAGGTCAAAGACAGAACATCAGCCCATATCGTAGTCAGTaGCCCGGGCATAGACGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTLSENSGEERGQRQNISPYRSQ*PGHRRL Trigger: TAAACGTCTATGCCCGGGGCACTGACTACGATATGG...GCTGATGTTCTGTCTTTGACCTCGTTCTTCTCCCGAGTTTTCACTGAGAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR CCA 90 bp | AGCATTACATTAATTCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAATCTCCAGCGCTCTCTaGTCGTCGTATTCCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SITLIPMQNSKSLIPTGQISSAL*SSYSRW Trigger: CCAGCGGGAATACGACGACCAGAGAGCGCTGGAGAT...TTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGAATTAATGTAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR CCA 90 bp | CACCCACTTGATCAAGTATTATCTCCTATCTCCCCCAGCTTCAGATGGTCAGTGTTCCCATCCCAAAAGTaGTTCTCCATGAGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPLDQVLSPISPSFRWSVFPSQK*FSMSQL Trigger: GAGCTGGCTCATGGAGAACCACTTTTGGGATGGGAA...CACTGACCATCTGAAGCTGGGGGAGATAGGAGATAATACTTGATCAAGTGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR CCA 90 bp | AGCATTACATTAATTCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAGAGAGCTTCCGGGCGTaGAGCATGACTGTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SITLIPMQNSKSLIPTGQESFRA*SMTVSS Trigger: AGAGGAGACAGTCATGCTCCACGCCCGGAAGCTCTC...TTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGAATTAATGTAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| 3UTR CAA 72 bp | TGGACACTCAAGACCAAAACAGCCACTGTTGCTTGCTaGACTCTTCCATCAGCAGACATCATCGGTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: WTLKTKTATVAC*TLPSADIIGVI Trigger: GATGACACCGATGATGTCTGCTGATGGAAGAGTCAAGCAAGCAACAGTGGCTGTTTTGGTCTTGAGTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| 3UTR CAA 72 bp | AGTCTGGACACTCAAGACCAAAACAGCCACTGTTGCTaGCTTGACTCTTCCATCAGCAGACATCATCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLDTQDQNSHCC*LDSSISRHHRC Trigger: ACACCGATGATGTCTGCTGATGGAAGAGTCAAGCAAGCAACAGTGGCTGTTTTGGTCTTGAGTGTCCAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR TCA 90 bp | TCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAATCCAACCTATATCCGAGAGGACGATGCTaGTGGAGTCATAGAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHAKLQEPDSNWPKSNLYPRGRC*WSHRTS Trigger: ACTGGTTCTATGACTCCATCAGCATCGTCCTCTCGG...ATATAGGTTGGATTTTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR CCA 90 bp | TTAGGACTCTCAGTGAAAACTCGGGAGAAGAACGAGGTCAAAGACAGAACATCATTTGTAGGAGCAAGCTaGCACCAGGTAGAAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LGLSVKTREKNEVKDRTSFVGAS*HQVEAT Trigger: AGTGGCTTCTACCTGGTGCCAGCTTGCTCCTACAAA...TGATGTTCTGTCTTTGACCTCGTTCTTCTCCCGAGTTTTCACTGAGAGTCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR TCA 90 bp | TCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAATCCAACCTATATCCAGCATGGAAAAGATaGAATCCTTGGCAGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHAKLQEPDSNWPKSNLYPAWKR*NPWQCG Trigger: TCCACACTGCCAAGGATTTCATCTTTTCCATGCTGG...ATATAGGTTGGATTTTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR TCA 90 bp | AAAAACAGAACGACAGTCACAAATCACACTACACGGTACGTAAATTTTAGAACCGCTGCAGGTCGTCAATaGGGCCCAGCAAAAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KNRTTVTNHTTRYVNFRTAAGRQ*GPAKSG Trigger: CCCACTTTTTGCTGGGCCTCATTGACGACCTGCAGC...GGTTCTAAAATTTACGTACCGTGTAGTGTGATTTGTGACTGTCGTTCTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CCA 90 bp | TATCAAAGAGGGCAAAACGGGACCCACAATGAAAGGAGAACTAGACAAAATGTAAAATCCTTGGCAGTGTaGATCTCCAGCGCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YQRGQNGTHNERRTRQNVKSLAV*ISSALW Trigger: CCAGAGAGCGCTGGAGATCCACACTGCCAAGGATTT...TACATTTTGTCTAGTTCTCCTTTCATTGTGGGTCCCGTTTTGCCCTCTTTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR CCA 90 bp | AAAAACAGAACGACAGTCACAAATCACACTACACGGTACGTAAATTTTAGAACCTCGTCGTATTCCCGCTaGTCGTGCCTGGTGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNRTTVTNHTTRYVNFRTSSYSR*SCLVNS Trigger: GGAATTCACCAGGCACGACCAGCGGGAATACGACGA...GGTTCTAAAATTTACGTACCGTGTAGTGTGATTTGTGACTGTCGTTCTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CAA 72 bp | GTATTTCCTGGTTCCTGCTCTACAGTGACACCTGCTTaGAACAGGCATGGTTATCTTCAATCTGGGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VFPGSCSTVTPA*NRHGYLQSGNN Trigger: ATTGTTCCCAGATTGAAGATAACCATGCCTGTTCAAAGCAGGTGTCACTGTAGAGCAGGAACCAGGAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS-3UTR TCA 90 bp | AACGGGACCCACAATGAAAGGAGAACTAGACAAAATGTAGAGACTCATCCTACTGCCACGGGAAGTTTTTaGTCTAGCTTTTGCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: NGTHNERRTRQNVETHPTATGSF*SSFCTI Trigger: AATGGTGCAAAAGCTAGATCAAAAACTTCCCGTGGC...AGTAGGATGAGTCTCTACATTTTGTCTAGTTCTCCTTTCATTGTGGGTCCCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | ATCAGCCGAAGAGGAAGAGAATGTGTTCAAATATGCCAGGAGGAGATGTGTTCCTTAGACTGCCTGAAATaGACTTCTTCAGTTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: ISRRGRECVQICQEEMCSLDCLK*TSSVVP Trigger: AGGTACAACTGAAGAAGTGCATTTCAGGCAGTCTAA...GGAACACATCTCCTCCTGGCATATTTGAACACATTCTCTTCCTCTTCGGCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CCA 90 bp | AGCATTACATTAATTCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAATGCCTGGTGAATTCCTaGATGAGTTTGTTCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SITLIPMQNSKSLIPTGQCLVNS*MSLFSS Trigger: GGAACTGAACAAACTCATCCAGGAATTCACCAGGCA...TTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGAATTAATGTAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | TTATCTCCTATCTCCCCCAGCTTCAGATGGTCAGTGAATAGGTATAAAGCTTTATGTGATCGGCGATTGTaGAGCAACCTTTCCATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPISPSFRWSVNRYKALCDRRL*SNLSIY Trigger: GTAAATGGAAAGGTTGCTGCACAATCGCCGATCACA...TAAAGCTTTATACCTATTCACTGACCATCTGAAGCTGGGGGAGATAGGAGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR GCA 90 bp | TTATCTCCTATCTCCCCCAGCTTCAGATGGTCAGTGAATAGGTATAAAGCTTTAACTCATTGTCCTTCTTaGCTTTGTAGGAGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPISPSFRWSVNRYKALTHCPS*LCRSKL Trigger: CAGCTTGCTCCTACAAAGGCAAGAAGGACAATGAGT...TAAAGCTTTATACCTATTCACTGACCATCTGAAGCTGGGGGAGATAGGAGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CCA 90 bp | AAAAACAGAACGACAGTCACAAATCACACTACACGGTACGTAAATTTTAGAACCAGTCAGCCACTTTGGTaGGGGAGAAGAAGTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNRTTVTNHTTRYVNFRTSQPLW*GRRSSW Trigger: CCAACTACTTCTTCTCCCCCACCAAAGTGGCTGACT...GGTTCTAAAATTTACGTACCGTGTAGTGTGATTTGTGACTGTCGTTCTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR TCA 90 bp | AGCATTACATTAATTCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAACCTTTCCATTTACTaGTTGTCCCCTCATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SITLIPMQNSKSLIPTGQNLSIY*LSPHQR Trigger: TCTTTGATGAGGGGACAATCAGTAAATGGAAAGGTT...TTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGAATTAATGTAATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| 3UTR CAA 72 bp | AAAGCTATCAAACCCTCCCTCCAAACCATCCAATGTTaGCTGATTCGAGAACAATTACATTCAATGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KAIKPSLQTIQC*LIREQLHSMRL Trigger: CAACCTCATTGAATGTAATTGTTCTCGAATCAGCAAACATTGGATGGTTTGGAGGGAGGGTTTGATAGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 90 bp | GTCAGCCGATTGGCTGCCTTCACGTGCTCAATGGCGGTGCGCAGGTaGTCTGCGGGATCGGAGCGAACCGAGGAGAGCTTCCGGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSRLAAFTCSMAVRR*SAGSERTEESFRAW Trigger: CCACGCCCGGAAGCTCTCCTCGGTTCGCTCCGATCCCGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 90 bp | GGTGGTGCTGCCCCGACGCTGGAGCTTCAGCGTCAGCCGATTGGCTaGCTTCACGTGCTCAATGGCGGTGCGCAGGTGCTCTGCGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GGAAPTLELQRQPIG*LHVLNGGAQVLCGI Trigger: GATCCCGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGACGCTGAAGCTCCAGCGTCGGGGCAGCACCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 90 bp | TGCTGGTGGTGCTGCCCCGACGCTGGAGCTTCAGCGTCAGCCGATTaGCTGCCTTCACGTGCTCAATGGCGGTGCGCAGGTGCTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CWWCCPDAGASASAD*LPSRAQWRCAGALR Trigger: CCGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGACGCTGAAGCTCCAGCGTCGGGGCAGCACCACCAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 90 bp | CCGATTGGCTGCCTTCACGTGCTCAATGGCGGTGCGCAGGTGCTCTaGGGGATCGGAGCGAACCGAGGAGAGCTTCCGGGCGTGGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PIGCLHVLNGGAQVL*GIGANRGELPGVEH Trigger: ATGCTCCACGCCCGGAAGCTCTCCTCGGTTCGCTCCGATCCCGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 90 bp | GCTTCAGCGTCAGCCGATTGGCTGCCTTCACGTGCTCAATGGCGGTaGGCAGGTGCTCTGCGGGATCGGAGCGAACCGAGGAGAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASASADWLPSRAQWR*AGALRDRSEPRRAS Trigger: GGAAGCTCTCCTCGGTTCGCTCCGATCCCGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGACGCTGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS TCA 90 bp | CCCCTCATCAAAGAGCCTGAGGCTCAGCCAGGAGTGGCACAGGGCTaGGTGGCGCATATCGAGCGTCACAGGCTGGTTACGGTCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLIKEPEAQPGVAQG*VAHIERHRLVTVMQ Trigger: CTGCATGACCGTAACCAGCCTGTGACGCTCGATATGCGCCACTCAGCCCTGTGCCACTCCTGGCTGAGCCTCAGGCTCTTTGATGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS TCA 90 bp | TCGGTGATCTTCCCATCCCAAAAGTGGTTCTCCATGAGCCAGCTCTaGGCCACCGCGGGCCAGCCTTTGAAGGACACCACGGGGACGATG | + |
|
Preference number: 5 (lower is better) Translates to: SVIFPSQKWFSMSQL*ATAGQPLKDTTGTM Trigger: CATCGTCCCCGTGGTGTCCTTCAAAGGCTGGCCCGCGGTGGCTCAGAGCTGGCTCATGGAGAACCACTTTTGGGATGGGAAGATCACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 90 bp | CAGGAGTGGCACAGGGCTGAGTGGCGCATATCGAGCGTCACAGGCTaGTTACGGTCATGCAGCTTAAGGGCGGGCACCAGAAGGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QEWHRAEWRISSVTG*LRSCSLRAGTRRVK Trigger: CTTTACCCTTCTGGTGCCCGCCCTTAAGCTGCATGACCGTAACCAGCCTGTGACGCTCGATATGCGCCACTCAGCCCTGTGCCACTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 90 bp | GGCCCAGCAAAAAGTGGGCTGCATAGTCTTCTTGAGCCAAGTAGCTaGCAGGGAGTCGATCACAGGCCCAGAGCATCATGCTCCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPAKSGLHSLLEPSS*QGVDHRPRASCSAG Trigger: ACCTGCGGAGCATGATGCTCTGGGCCTGTGATCGACTCCCTGCCAGCTACTTGGCTCAAGAAGACTATGCAGCCCACTTTTTGCTGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS GCA 90 bp | GTGTGGATCTCCAGCGCTCTCTGGTCGTCGTATTCCCGCTGGTCGTaGCTGGTGAATTCCTGGATGAGTTTGTTCAGTTCCTCCACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VWISSALWSSYSRWS*LVNSWMSLFSSSTR Trigger: TCGGGTGGAGGAACTGAACAAACTCATCCAGGAATTCACCAGGCACGACCAGCGGGAATACGACGACCAGAGAGCGCTGGAGATCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 90 bp | TTACTGATTGTCCCCTCATCAAAGAGCCTGAGGCTCAGCCAGGAGTaGCACAGGGCTGAGTGGCGCATATCGAGCGTCACAGGCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LLIVPSSKSLRLSQE*HRAEWRISSVTGWL Trigger: TAACCAGCCTGTGACGCTCGATATGCGCCACTCAGCCCTGTGCCACTCCTGGCTGAGCCTCAGGCTCTTTGATGAGGGGACAATCAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 90 bp | CAGGCAGTGCTGCAGGTCGTCAATGAGGCCCAGCAAAAAGTGGGCTaGATAGTCTTCTTGAGCCAAGTAGCTGGCAGGGAGTCGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: QAVLQVVNEAQQKVG*IVFLSQVAGRESIT Trigger: TGTGATCGACTCCCTGCCAGCTACTTGGCTCAAGAAGACTATGCAGCCCACTTTTTGCTGGGCCTCATTGACGACCTGCAGCACTGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS CCA 90 bp | GCTCTCTGGTCGTCGTATTCCCGCTGGTCGTGCCTGGTGAATTCCTaGATGAGTTTGTTCAGTTCCTCCACCCGAGCTCCAGACCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ALWSSYSRWSCLVNS*MSLFSSSTRAPDLK Trigger: TTTCAGGTCTGGAGCTCGGGTGGAGGAACTGAACAAACTCATCCAGGAATTCACCAGGCACGACCAGCGGGAATACGACGACCAGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS CCA 90 bp | TTGGCAGTGTGGATCTCCAGCGCTCTCTGGTCGTCGTATTCCCGCTaGTCGTGCCTGGTGAATTCCTGGATGAGTTTGTTCAGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAVWISSALWSSYSR*SCLVNSWMSLFSSS Trigger: GGAGGAACTGAACAAACTCATCCAGGAATTCACCAGGCACGACCAGCGGGAATACGACGACCAGAGAGCGCTGGAGATCCACACTGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS TCA 90 bp | GCGAACCGAGGAGAGCTTCCGGGCGTGGAGCATGACTGTCTCCTCTaGCAGATGCTCCAGCATGTTGCACTGAGGGATGAAATAATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ANRGELPGVEHDCLL*QMLQHVALRDEIIR Trigger: CCTAATTATTTCATCCCTCAGTGCAACATGCTGGAGCATCTGTCAGAGGAGACAGTCATGCTCCACGCCCGGAAGCTCTCCTCGGTTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS CCA 90 bp | CCACCACACCTTCCCGGACTCCTCCGGAGAGCAACAGATACTCGTTaGCCACGGGAAGTTTTTGATCTAGCTTTTGCACCATTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPHLPGLLRRATDTR*PREVFDLAFAPFPA Trigger: TGCTGGGAATGGTGCAAAAGCTAGATCAAAAACTTCCCGTGGCCAACGAGTATCTGTTGCTCTCCGGAGGAGTCCGGGAAGGTGTGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CAA 90 bp | AGGACTCTCAGTGAAAACTCGGGAGAAGAACGAGGTCAAAGACAGAACATCAGCGGGAAGGCAGGCTTGTaGTTGCAGCCCAGGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTLSENSGEERGQRQNISGKAGL*LQPREA Trigger: AGCCTCCCTGGGCTGCAACAACAAGCCTGCCTTCCC...GCTGATGTTCTGTCTTTGACCTCGTTCTTCTCCCGAGTTTTCACTGAGAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
||
| CDS CCA 90 bp | ATGGAAAAGATGAAATCCTTGGCAGTGTGGATCTCCAGCGCTCTCTaGTCGTCGTATTCCCGCTGGTCGTGCCTGGTGAATTCCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: MEKMKSLAVWISSAL*SSYSRWSCLVNSWM Trigger: CATCCAGGAATTCACCAGGCACGACCAGCGGGAATACGACGACCAGAGAGCGCTGGAGATCCACACTGCCAAGGATTTCATCTTTTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 90 bp | TTTTGCACCATTCCCAGCATGGAAAAGATGAAATCCTTGGCAGTGTaGATCTCCAGCGCTCTCTGGTCGTCGTATTCCCGCTGGTCGTGC | + |
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Preference number: 5 (lower is better) Translates to: FCTIPSMEKMKSLAV*ISSALWSSYSRWSC Trigger: GCACGACCAGCGGGAATACGACGACCAGAGAGCGCTGGAGATCCACACTGCCAAGGATTTCATCTTTTCCATGCTGGGAATGGTGCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 90 bp | ATGGTACCGTTCTTCTCTACCTTCTCCACCTTCGGCATCCCTCTCTaGGGTTTCTTCTGTATCTCCGAGAGGACGATGCTGATGGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: MVPFFSTFSTFGIPL*GFFCISERTMLMES Trigger: TGACTCCATCAGCATCGTCCTCTCGGAGATACAGAAGAAACCCCAGAGAGGGATGCCGAAGGTGGAGAAGGTAGAGAAGAACGGTACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 90 bp | GGACAGTCGCCACTCATTGTCCTTCTTGCCTTTGTAGGAGCAAGCTaGCACCAGGTAGAAGCCACTGATGACCTCTTCTTCGGTGATCTT | + |
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Preference number: 5 (lower is better) Translates to: GQSPLIVLLAFVGAS*HQVEATDDLFFGDL Trigger: AAGATCACCGAAGAAGAGGTCATCAGTGGCTTCTACCTGGTGCCAGCTTGCTCCTACAAAGGCAAGAAGGACAATGAGTGGCGACTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 90 bp | GCATTAGACTGCCTGAAATGCACTTCTTCAGTTGTACCTCGCTCCTaGCGAAGGACAGTCGCCACTCATTGTCCTTCTTGCCTTTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: ALDCLKCTSSVVPRS*RRTVATHCPSCLCR Trigger: CCTACAAAGGCAAGAAGGACAATGAGTGGCGACTGTCCTTCGCCAGGAGCGAGGTACAACTGAAGAAGTGCATTTCAGGCAGTCTAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CAA 90 bp | AGCATTACATTAATTCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAAAAGGCAGGCTTGTTGTaGCAGCCCAGGGAGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SITLIPMQNSKSLIPTGQKAGLL*QPREAA Trigger: GGCAGCCTCCCTGGGCTGCAACAACAAGCCTGCCTT...TTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGAATTAATGTAATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CAA 90 bp | TTATCTCCTATCTCCCCCAGCTTCAGATGGTCAGTGAATAGGTATAAAGCTTTATCCGGGAAGGCAGGCTaGTTGTTGCAGCCCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LSPISPSFRWSVNRYKALSGKAG*LLQPRE Trigger: CTCCCTGGGCTGCAACAACAAGCCTGCCTTCCCGGA...TAAAGCTTTATACCTATTCACTGACCATCTGAAGCTGGGGGAGATAGGAGATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CAA 90 bp | GCAAGCAAGAGGATTCGTGGGCAGTGTCGTCTATGGCTCAAGTTCTCCTTTAAAGGCCTCGACAGGAGTTaGATGATGATGGCTTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ASKRIRGQCRLWLKFSFKGLDRS*MMMALQ Trigger: CTGCAAAGCCATCATCATCAAACTCCTGTCGAGGCC...TTTAAAGGAGAACTTGAGCCATAGACGACACTGCCCACGAATCCTCTTGCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CAA 90 bp | AGGACTCTCAGTGAAAACTCGGGAGAAGAACGAGGTCAAAGACAGAACATCAGCGAAAAGATGAAATCCTaGGCAGTGTGGATCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RTLSENSGEERGQRQNISEKMKS*AVWISS Trigger: GCTGGAGATCCACACTGCCAAGGATTTCATCTTTTC...GCTGATGTTCTGTCTTTGACCTCGTTCTTCTCCCGAGTTTTCACTGAGAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CAA 90 bp | AACGGGACCCACAATGAAAGGAGAACTAGACAAAATGTAGAGACTCATCCTACTGGCTGCATAGTCTTCTaGAGCCAAGTAGCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NGTHNERRTRQNVETHPTGCIVF*SQVAGR Trigger: CCTGCCAGCTACTTGGCTCAAGAAGACTATGCAGCC...AGTAGGATGAGTCTCTACATTTTGTCTAGTTCTCCTTTCATTGTGGGTCCCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CAA 90 bp | AGCATTACATTAATTCCCATGCAAAACTCCAAGAGCCTGATTCCAACTGGCCAATTAGGGCACATCTTGTaGACCAGGCAGTGCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SITLIPMQNSKSLIPTGQLGHIL*TRQCCR Trigger: CCTGCAGCACTGCCTGGTCAACAAGATGTGCCCTAA...TTGGCCAGTTGGAATCAGGCTCTTGGAGTTTTGCATGGGAATTAATGTAATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS-3UTR CAA 90 bp | TATCAAAGAGGGCAAAACGGGACCCACAATGAAAGGAGAACTAGACAAAATGTAAATGCACTTCTTCAGTaGTACCTCGCTCCTGGCGAA | + |
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Preference number: 5 (lower is better) Translates to: YQRGQNGTHNERRTRQNVNALLQ*YLAPGE Trigger: TTCGCCAGGAGCGAGGTACAACTGAAGAAGTGCATT...TACATTTTGTCTAGTTCTCCTTTCATTGTGGGTCCCGTTTTGCCCTCTTTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 72 bp | TGCCTTCACGTGCTCAATGGCGGTGCGCAGGTGCTCTaGGGGATCGGAGCGAACCGAGGAGAGCTTCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: CLHVLNGGAQVL*GIGANRGELPG Trigger: GCCCGGAAGCTCTCCTCGGTTCGCTCCGATCCCGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 72 bp | GCCCCGACGCTGGAGCTTCAGCGTCAGCCGATTGGCTaGCTTCACGTGCTCAATGGCGGTGCGCAGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: APTLELQRQPIG*LHVLNGGAQVL Trigger: GAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGACGCTGAAGCTCCAGCGTCGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CAA 72 bp | GTGCTGCCCCGACGCTGGAGCTTCAGCGTCAGCCGATaGGCTGCCTTCACGTGCTCAATGGCGGTGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VLPRRWSFSVSR*AAFTCSMAVRR Trigger: CCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGACGCTGAAGCTCCAGCGTCGGGGCAGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CAA 90 bp | ATGCTGGTGGTGCTGCCCCGACGCTGGAGCTTCAGCGTCAGCCGATaGGCTGCCTTCACGTGCTCAATGGCGGTGCGCAGGTGCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: MLVVLPRRWSFSVSR*AAFTCSMAVRRCSA Trigger: CGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGACGCTGAAGCTCCAGCGTCGGGGCAGCACCACCAGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 72 bp | TCAGCCGATTGGCTGCCTTCACGTGCTCAATGGCGGTaGGCAGGTGCTCTGCGGGATCGGAGCGAACCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SADWLPSRAQWR*AGALRDRSEPR Trigger: CCTCGGTTCGCTCCGATCCCGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | TGCTGCCCCGACGCTGGAGCTTCAGCGTCAGCCGATTaGCTGCCTTCACGTGCTCAATGGCGGTGCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: CCPDAGASASAD*LPSRAQWRCAG Trigger: ACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGACGCTGAAGCTCCAGCGTCGGGGCAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 72 bp | TTGGCTGCCTTCACGTGCTCAATGGCGGTGCGCAGGTaGTCTGCGGGATCGGAGCGAACCGAGGAGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LAAFTCSMAVRR*SAGSERTEESF Trigger: GAAGCTCTCCTCGGTTCGCTCCGATCCCGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 72 bp | TGGAGCTTCAGCGTCAGCCGATTGGCTGCCTTCACGTaGTCAATGGCGGTGCGCAGGTGCTCTGCGGGATCG | + |
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Preference number: 6 (lower is better) Translates to: WSFSVSRLAAFT*SMAVRRCSAGS Trigger: CGATCCCGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGACGCTGAAGCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | GCGGGATCGGAGCGAACCGAGGAGAGCTTCCGGGCGTaGAGCATGACTGTCTCCTCTGACAGATGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AGSERTEESFRA*SMTVSSDRCSS Trigger: GCTGGAGCATCTGTCAGAGGAGACAGTCATGCTCCACGCCCGGAAGCTCTCCTCGGTTCGCTCCGATCCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | TCAGCGTCAGCCGATTGGCTGCCTTCACGTGCTCAATaGCGGTGCGCAGGTGCTCTGCGGGATCGGAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: SASADWLPSRAQ*RCAGALRDRSE Trigger: TTCGCTCCGATCCCGCAGAGCACCTGCGCACCGCCATTGAGCACGTGAAGGCAGCCAATCGGCTGACGCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | CACAGGGCTGAGTGGCGCATATCGAGCGTCACAGGCTaGTTACGGTCATGCAGCTTAAGGGCGGGCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: HRAEWRISSVTG*LRSCSLRAGTR Trigger: TCTGGTGCCCGCCCTTAAGCTGCATGACCGTAACCAGCCTGTGACGCTCGATATGCGCCACTCAGCCCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS TCA 72 bp | TTCCCATCCCAAAAGTGGTTCTCCATGAGCCAGCTCTaGGCCACCGCGGGCCAGCCTTTGAAGGACACCACG | + |
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Preference number: 6 (lower is better) Translates to: FPSQKWFSMSQL*ATAGQPLKDTT Trigger: CGTGGTGTCCTTCAAAGGCTGGCCCGCGGTGGCTCAGAGCTGGCTCATGGAGAACCACTTTTGGGATGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 72 bp | TGGCGCATATCGAGCGTCACAGGCTGGTTACGGTCATaGAGCTTAAGGGCGGGCACCAGAAGGGTAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: WRISSVTGWLRS*SLRAGTRRVKS Trigger: GGACTTTACCCTTCTGGTGCCCGCCCTTAAGCTGCATGACCGTAACCAGCCTGTGACGCTCGATATGCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CAA 90 bp | CAGGTCGTCAATGAGGCCCAGCAAAAAGTGGGCTGCATAGTCTTCTaGAGCCAAGTAGCTGGCAGGGAGTCGATCACAGGCCCAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: QVVNEAQQKVGCIVF*SQVAGRESITGPEH Trigger: ATGCTCTGGGCCTGTGATCGACTCCCTGCCAGCTACTTGGCTCAAGAAGACTATGCAGCCCACTTTTTGCTGGGCCTCATTGACGACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 72 bp | TCCAGCGCTCTCTGGTCGTCGTATTCCCGCTGGTCGTaGCTGGTGAATTCCTGGATGAGTTTGTTCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSALWSSYSRWS*LVNSWMSLFSS Trigger: GGAACTGAACAAACTCATCCAGGAATTCACCAGGCACGACCAGCGGGAATACGACGACCAGAGAGCGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 72 bp | CTGCAGGTCGTCAATGAGGCCCAGCAAAAAGTGGGCTaGATAGTCTTCTTGAGCCAAGTAGCTGGCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LQVVNEAQQKVG*IVFLSQVAGRE Trigger: CTCCCTGCCAGCTACTTGGCTCAAGAAGACTATGCAGCCCACTTTTTGCTGGGCCTCATTGACGACCTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | TCGTCGTATTCCCGCTGGTCGTGCCTGGTGAATTCCTaGATGAGTTTGTTCAGTTCCTCCACCCGAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSYSRWSCLVNS*MSLFSSSTRAP Trigger: TGGAGCTCGGGTGGAGGAACTGAACAAACTCATCCAGGAATTCACCAGGCACGACCAGCGGGAATACGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | TGGATCTCCAGCGCTCTCTGGTCGTCGTATTCCCGCTaGTCGTGCCTGGTGAATTCCTGGATGAGTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: WISSALWSSYSR*SCLVNSWMSLF Trigger: GAACAAACTCATCCAGGAATTCACCAGGCACGACCAGCGGGAATACGACGACCAGAGAGCGCTGGAGATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | ATGAAATCCTTGGCAGTGTGGATCTCCAGCGCTCTCTaGTCGTCGTATTCCCGCTGGTCGTGCCTGGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: MKSLAVWISSAL*SSYSRWSCLVN Trigger: ATTCACCAGGCACGACCAGCGGGAATACGACGACCAGAGAGCGCTGGAGATCCACACTGCCAAGGATTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS GCA 72 bp | TGCAGGCTTGGTAGGCCTGCATTAGACTGCCTGAAATaGACTTCTTCAGTTGTACCTCGCTCCTGGCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: CRLGRPALDCLK*TSSVVPRSWRR Trigger: CCTTCGCCAGGAGCGAGGTACAACTGAAGAAGTGCATTTCAGGCAGTCTAATGCAGGCCTACCAAGCCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | AAAAGTGGGCTGCATAGTCTTCTTGAGCCAAGTAGCTaGCAGGGAGTCGATCACAGGCCCAGAGCATCATGC | + |
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Preference number: 6 (lower is better) Translates to: KSGLHSLLEPSS*QGVDHRPRASC Trigger: GCATGATGCTCTGGGCCTGTGATCGACTCCCTGCCAGCTACTTGGCTCAAGAAGACTATGCAGCCCACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CAA 72 bp | AATGAGGCCCAGCAAAAAGTGGGCTGCATAGTCTTCTaGAGCCAAGTAGCTGGCAGGGAGTCGATCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: NEAQQKVGCIVF*SQVAGRESITG Trigger: GCCTGTGATCGACTCCCTGCCAGCTACTTGGCTCAAGAAGACTATGCAGCCCACTTTTTGCTGGGCCTCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | ATTCCCAGCATGGAAAAGATGAAATCCTTGGCAGTGTaGATCTCCAGCGCTCTCTGGTCGTCGTATTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: IPSMEKMKSLAV*ISSALWSSYSR Trigger: GCGGGAATACGACGACCAGAGAGCGCTGGAGATCCACACTGCCAAGGATTTCATCTTTTCCATGCTGGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | TGCCTGAAATGCACTTCTTCAGTTGTACCTCGCTCCTaGCGAAGGACAGTCGCCACTCATTGTCCTTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CLKCTSSVVPRS*RRTVATHCPSC Trigger: GCAAGAAGGACAATGAGTGGCGACTGTCCTTCGCCAGGAGCGAGGTACAACTGAAGAAGTGCATTTCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS TCA 72 bp | CTTTGGTGGGGGAGAAGAAGTAGTTGGTGGCACCGTTaGTGTGATCGGCGATTGTGCAGCAACCTTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: LWWGRRSSWWHR*CDRRLCSNLSI Trigger: AATGGAAAGGTTGCTGCACAATCGCCGATCACATCAACGGTGCCACCAACTACTTCTTCTCCCCCACCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS TCA 72 bp | TCTGGGGTTTCTTCTGTATCTCCGAGAGGACGATGCTaGTGGAGTCATAGAACCAGTCAGCCACTTTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGVSSVSPRGRC*WSHRTSQPLWW Trigger: CCACCAAAGTGGCTGACTGGTTCTATGACTCCATCAGCATCGTCCTCTCGGAGATACAGAAGAAACCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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| CDS CCA 72 bp | CCACTCATTGTCCTTCTTGCCTTTGTAGGAGCAAGCTaGCACCAGGTAGAAGCCACTGATGACCTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLIVLLAFVGAS*HQVEATDDLFF Trigger: GAAGAAGAGGTCATCAGTGGCTTCTACCTGGTGCCAGCTTGCTCCTACAAAGGCAAGAAGGACAATGAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100023.3 |
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