Pregenerated sensors for MB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018893Ensembl transcript IDs: ENSMUST00000019037.10, ENSMUST00000166179.9, ENSMUST00000169226.9, ENSMUST00000229125.2, ENSMUST00000229423.2, ENSMUST00000230031.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAAGGCCACTTTGCACCTCTGGGCTCCAGGGTAACACTGCCCAGAGCCCTGTCCTGGGTCCCAGCTTGGTaGGCTGGACAGTGGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: EGHFAPLGSRVTLPRALSWVPAW*AGQWEP Trigger: GGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCA...GGACAGGGCTCTGGGCAGTGTTACCCTGGAGCCCAGAGGTGCAAAGTGGCCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCACCTCTGGGCTCCAGGGTAACACTGCCCAGAGCCCTGTCCCCAGGGGTGCACTGGGTCCCAGCTTaGTGGGCTGGACAGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: FAPLGSRVTLPRALSPGVHWVPA*WAGQWE Trigger: CTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTG...CACCCCTGGGGACAGGGCTCTGGGCAGTGTTACCCTGGAGCCCAGAGGTGCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACACTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCCCCAGCTTGGTGGGCTaGACAGTGGGAGCCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: ATLCSPLLFSANLEHCTRPSLVG*TVGAHG Trigger: GCCATGGGCTCCCACTGTCCAGCCCACCAAGCTGGG...GCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAGTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAGAAGAAAATGGACTGGGACTTAGGAGACCTGAGCATGACCCGGCAGAGCCCCAGCTTGGTGGGCTaGACAGTGGGAGCCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: NQKKMDWDLGDLSMTRQSPSLVG*TVGAHG Trigger: GCCATGGGCTCCCACTGTCCAGCCCACCAAGCTGGG...GCTCTGCCGGGTCATGCTCAGGTCTCCTAAGTCCCAGTCCATTTTCTTCTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR-3UTR CCA 90 bp | AAACCAGAAGAAAATGGACTGGGACTTAGGAGACCTGAGCATGACCCGGCAGAGTGGGTCCCAGCTTGGTaGGCTGGACAGTGGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: KPEENGLGLRRPEHDPAEWVPAW*AGQWEP Trigger: GGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCA...CTCTGCCGGGTCATGCTCAGGTCTCCTAAGTCCCAGTCCATTTTCTTCTGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCCGTTTTCACCCTCCACTCCCTCTAAGCAACCCTCCATCTCGCCCAAAGGTCTTGCTACACAACACTaGGTCCCAGCTTGGTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: APFSPSTPSKQPSISPKGLATQH*VPAWWA Trigger: AGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAG...ACCTTTGGGCGAGATGGAGGGTTGCTTAGAGGGAGTGGAGGGTGAAAACGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 |
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| 3UTR-3UTR CCA 90 bp | GATGCCACACTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACATGGGTCCCAGCTTGGTaGGCTGGACAGTGGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: DATLCSPLLFSANLEHCTWVPAW*AGQWEP Trigger: GGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCA...TGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAGTGTGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGATGCCACACTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCCACTGGGTCCCAGCTTaGTGGGCTGGACAGTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VDATLCSPLLFSANLEHCHWVPA*WAGQWE Trigger: CTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTG...GCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAGTGTGGCATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR CAA 90 bp | TCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTaGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SPLLFSANLEHCTRY*LHNTGSQLGGLDSG Trigger: CCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACACTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCCTTGCTACACAACACTaGGTCCCAGCTTGGTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ATLCSPLLFSANLEHCTRLATQH*VPAWWA Trigger: AGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAG...GCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAGTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGGCCACTTTGCACCTCTGGGCTCCAGGGTAACACTGCCCAGAGCCCTGTCCACACTGGGTCCCAGCTaGGTGGGCTGGACAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EGHFAPLGSRVTLPRALSTLGPS*VGWTVG Trigger: TCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGT...GGACAGGGCTCTGGGCAGTGTTACCCTGGAGCCCAGAGGTGCAAAGTGGCCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR TCA 72 bp | TGGGACTTAGGAGACCTGAGCATGACCCGGCAGAGCTaGCGAAGGCCACTTTGCACCTCTGGGCTCCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: WDLGDLSMTRQS*RRPLCTSGLQG Trigger: ACCCTGGAGCCCAGAGGTGCAAAGTGGCCTTCGTCAGCTCTGCCGGGTCATGCTCAGGTCTCCTAAGTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR CCA 72 bp | CCTAGAACACTGCACACGCTACTTGCTACACAACACTaGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: PRTLHTLLATQH*VPAWWAGQWEP Trigger: GGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAGTGTTCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| 3UTR-3UTR CAA 90 bp | GATGCCACACTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACAACACTGGGTCCCAGCTaGGTGGGCTGGACAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DATLCSPLLFSANLEHCTTLGPS*VGWTVG Trigger: TCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGT...TGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAGTGTGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| 3UTR GCA 72 bp | TGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTaGACACGCTACTTGCTACACAACACTGGGTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: CSPLLFSANLEH*TRYLLHNTGSQ Trigger: CTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| 3UTR TCA 72 bp | CTCCATCTCGCCCAAAGGTCAGGGTCTGCTAGTCAGTaGCTTGGATTTGGGGTCAAATGTGACAGTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LHLAQRSGSASQ*LGFGVKCDSGK Trigger: TTTTCCACTGTCACATTTGACCCCAAATCCAAGTCACTGACTAGCAGACCCTGACCTTTGGGCGAGATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 |
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| CDS-3UTR CCA 90 bp | GCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCCAGGGCCTTGCTCATaGCGCCCTGAGCATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATCYTTLGPSLVGWTVGAPGPCS*RPEHLL Trigger: GAGCAGATGCTCAGGGCGCCATGAGCAAGGCCCTGG...GGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR TCA 90 bp | TTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCATGGTGGTACCCAGGGCTGTaGGCACGGTGCAACCATGCT | + |
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Preference number: 4 (lower is better) Translates to: LLHNTGSQLGGLDSGSPWWYPGL*ARCNHA Trigger: AGCATGGTTGCACCGTGCTCACAGCCCTGGGTACCA...CCATGGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR GCA 90 bp | ACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCATAGAGCTCCAGGGCCTTaGTCATGGCGCCCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCYTTLGPSLVGWTVGAHRAPGP*SWRPEH Trigger: ATGCTCAGGGCGCCATGAGCAAGGCCCTGGAGCTCT...ATGGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR GCA 90 bp | ACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGAGAGCTCCAGGGCCTTaGTCATGGCGCCCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLATQHWVPAWWAGQWERAPGP*SWRPEH Trigger: ATGCTCAGGGCGCCATGAGCAAGGCCCTGGAGCTCT...CTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR CCA 90 bp | CTGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGAGGACTTCCTGTCCATaGCCAGCAAGGTCGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LHTLLATQHWVPAWWAGQRTSCP*PARSAS Trigger: GGAGGCCGACCTTGCTGGCCATGGACAGGAAGTCCT...CTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
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| CDS-3UTR CCA 90 bp | TGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTCCAGGGCCTTGCTCATaGCGCCCTGAGCATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CTRYLLHNTGSQLGGLDSPGPCS*RPEHLL Trigger: GAGCAGATGCTCAGGGCGCCATGAGCAAGGCCCTGG...ACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR GCA 90 bp | CTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCATGACATTCAGCACCAGCTaGCACTCCCCATCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LATQHWVPAWWAGQWEPMTFSTS*HSPSLS Trigger: GCTCAGTGATGGGGAGTGGCAGCTGGTGCTGAATGT...CATGGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
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| CDS-3UTR CCA 90 bp | ACACTGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGAAGGACTTCCTGTCCATaGCCAGCAAGGTCGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TLHTLLATQHWVPAWWAGRTSCP*PARSAS Trigger: GGAGGCCGACCTTGCTGGCCATGGACAGGAAGTCCT...TCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
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| CDS-3UTR CCA 90 bp | GCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCCGGGATCTTGTGCTTaGTGGCGTGTGATTGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: ATCYTTLGPSLVGWTVGAPGSCA*WRVIGL Trigger: TAGCCCAATCACACGCCACCAAGCACAAGATCCCGG...GGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR CCA 90 bp | TTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCATGGCCGGGATCTTGTGCTTaGTGGCGTGTGATTGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: LLHNTGSQLGGLDSGSPWPGSCA*WRVIGL Trigger: TAGCCCAATCACACGCCACCAAGCACAAGATCCCGG...CCATGGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR CCA 90 bp | CGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCGGATCTTGTGCTTGGTaGCGTGTGATTGGGCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: RYLLHNTGSQLGGLDSGSGSCAW*RVIGLE Trigger: CTCTAGCCCAATCACACGCCACCAAGCACAAGATCC...GCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR CCA 90 bp | ACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCGGGATCTTGTGCTTaGTGGCGTGTGATTGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: TLLATQHWVPAWWAGQWEPGSCA*WRVIGL Trigger: TAGCCCAATCACACGCCACCAAGCACAAGATCCCGG...CTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR CCA 90 bp | GAAGGCCACTTTGCACCTCTGGGCTCCAGGGTAACACTGCCCAGAGCCCTGTCCCTAGCTCCTTGTACTTaGCGGCAATGTCATTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: EGHFAPLGSRVTLPRALSLAPCT*RQCHSG Trigger: TCCGGAATGACATTGCCGCCAAGTACAAGGAGCTAG...GGACAGGGCTCTGGGCAGTGTTACCCTGGAGCCCAGAGGTGCAAAGTGGCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| CDS-3UTR TCA 90 bp | CTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCCTTCTTCAGGTCCTCTaGGCCCTTCATATCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLATQHWVPAWWAGQWEPLLQVL*ALHIFL Trigger: GAGGAAGATATGAAGGGCTCAGAGGACCTGAAGAAG...GGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
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| CDS-3UTR TCA 90 bp | GCCACACTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTGGTACCCAGGGCTGTaGGCACGGTGCAACCATGCT | + |
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Preference number: 4 (lower is better) Translates to: ATLCSPLLFSANLEHCTRWYPGL*ARCNHA Trigger: AGCATGGTTGCACCGTGCTCACAGCCCTGGGTACCA...GCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAGTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| CDS-3UTR CCA 90 bp | AACCAGAAGAAAATGGACTGGGACTTAGGAGACCTGAGCATGACCCGGCAGAGCAGGACTTCCTGTCCATaGCCAGCAAGGTCGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NQKKMDWDLGDLSMTRQSRTSCP*PARSAS Trigger: GGAGGCCGACCTTGCTGGCCATGGACAGGAAGTCCT...GCTCTGCCGGGTCATGCTCAGGTCTCCTAAGTCCCAGTCCATTTTCTTCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 |
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| CDS-3UTR CCA 90 bp | GTGGATGCCACACTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCCCAGGGCCTTGCTCATaGCGCCCTGAGCATCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VDATLCSPLLFSANLEHCPGPCS*RPEHLL Trigger: GAGCAGATGCTCAGGGCGCCATGAGCAAGGCCCTGG...GCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAGTGTGGCATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| CDS-3UTR CCA 90 bp | TTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCATGGCTAGCTCCTTGTACTTaGCGGCAATGTCATTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: LLHNTGSQLGGLDSGSPWLAPCT*RQCHSG Trigger: TCCGGAATGACATTGCCGCCAAGTACAAGGAGCTAG...CCATGGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR CCA 90 bp | TGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCTACCAGGGCCTTGCTCATaGCGCCCTGAGCATCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: CSPLLFSANLEHCTRYLLPGPCS*RPEHLL Trigger: GAGCAGATGCTCAGGGCGCCATGAGCAAGGCCCTGG...TAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR CCA 90 bp | CTGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGCTAGCTCCTTGTACTTaGCGGCAATGTCATTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: LHTLLATQHWVPAWWAGQLAPCT*RQCHSG Trigger: TCCGGAATGACATTGCCGCCAAGTACAAGGAGCTAG...CTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR TCA 90 bp | CTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGTGGTACCCAGGGCTGTaGGCACGGTGCAACCATGCT | + |
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Preference number: 4 (lower is better) Translates to: LCSPLLFSANLEHCTRYLWYPGL*ARCNHA Trigger: AGCATGGTTGCACCGTGCTCACAGCCCTGGGTACCA...CAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR GCA 90 bp | TCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCTACACAGAGCTCCAGGGCCTTaGTCATGGCGCCCTGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SPLLFSANLEHCTRYLLHRAPGP*SWRPEH Trigger: ATGCTCAGGGCGCCATGAGCAAGGCCCTGGAGCTCT...GTGTAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| 3UTR CAA 72 bp | CTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTaGCTACACAACACTGGGTCCCAGCTTGGTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LFSANLEHCTRY*LHNTGSQLGGL Trigger: CAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS-3UTR TCA 90 bp | AGAACACTGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTCTTCTTCAGGTCCTCTaGGCCCTTCATATCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RTLHTLLATQHWVPAWWALLQVL*ALHIFL Trigger: GAGGAAGATATGAAGGGCTCAGAGGACCTGAAGAAG...AGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAGTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
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| CDS-3UTR CCA 90 bp | GTGGATGCCACACTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCCCGGGATCTTGTGCTTaGTGGCGTGTGATTGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: VDATLCSPLLFSANLEHCPGSCA*WRVIGL Trigger: TAGCCCAATCACACGCCACCAAGCACAAGATCCCGG...GCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAGTGTGGCATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
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| CDS-3UTR CCA 90 bp | AGAACACTGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTCTAGCTCCTTGTACTTaGCGGCAATGTCATTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLHTLLATQHWVPAWWALAPCT*RQCHSG Trigger: TCCGGAATGACATTGCCGCCAAGTACAAGGAGCTAG...AGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAGTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCTACACACATTCAGCACCAGCTaGCACTCCCCATCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLLFSANLEHCTRYLLHTFSTS*HSPSLS Trigger: GCTCAGTGATGGGGAGTGGCAGCTGGTGCTGAATGT...GTGTAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
||
| CDS-3UTR TCA 90 bp | CTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCCTTCATATCTTCCTCTaGCTTCAAGTTCTTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLATQHWVPAWWAGQWEPLHIFL*LQVLEL Trigger: AAGTTCAAGAACTTGAAGTCAGAGGAAGATATGAAG...GGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCATGGCTTCATATCTTCCTCTaGCTTCAAGTTCTTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLHNTGSQLGGLDSGSPWLHIFL*LQVLEL Trigger: AAGTTCAAGAACTTGAAGTCAGAGGAAGATATGAAG...CCATGGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
||
| CDS-3UTR TCA 90 bp | GCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCTTCATATCTTCCTCTaGCTTCAAGTTCTTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: ATCYTTLGPSLVGWTVGALHIFL*LQVLEL Trigger: AAGTTCAAGAACTTGAAGTCAGAGGAAGATATGAAG...GGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCTACACAACACATTCAGCACCAGCTaGCACTCCCCATCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLFSANLEHCTRYLLHNTFSTS*HSPSLS Trigger: GCTCAGTGATGGGGAGTGGCAGCTGGTGCTGAATGT...GTTGTGTAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
||
| CDS-3UTR GCA 90 bp | GATGCCACACTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACAAGCACGGTGCAACCATaGTTCTTCAGGTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DATLCSPLLFSANLEHCTSTVQP*FFRSSE Trigger: CTCAGAGGACCTGAAGAAGCATGGTTGCACCGTGCT...TGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAGTGTGGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCTAGGATCTTGTGCTTGGTaGCGTGTGATTGGGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSPLLFSANLEHCTRYLLGSCAW*RVIGLE Trigger: CTCTAGCCCAATCACACGCCACCAAGCACAAGATCC...TAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCTACACAACAGCACGGTGCAACCATaGTTCTTCAGGTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLFSANLEHCTRYLLHNSTVQP*FFRSSE Trigger: CTCAGAGGACCTGAAGAAGCATGGTTGCACCGTGCT...GTTGTGTAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| 3UTR CAA 72 bp | ATCTCGCCCAAAGGTCAGGGTCTGCTAGTCAGTGACTaGGATTTGGGGTCAAATGTGACAGTGGAAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISPKGQGLLVSD*DLGSNVTVEKR Trigger: TCTCTTTTCCACTGTCACATTTGACCCCAAATCCAAGTCACTGACTAGCAGACCCTGACCTTTGGGCGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 |
||
| CDS GCA 90 bp | CCTTGTACTTGGCGGCAATGTCATTCCGGAAGAGCTCCAGGGCCTTaGTCATGGCGCCCTGAGCATCTGCTCCAAAGTCCCCGGAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: PCTWRQCHSGRAPGP*SWRPEHLLQSPRNV Trigger: GACATTCCGGGGACTTTGGAGCAGATGCTCAGGGCGCCATGAGCAAGGCCCTGGAGCTCTTCCGGAATGACATTGCCGCCAAGTACAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGACCGGGATCTTGTGCTaGGTGGCGTGTGATTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHTLLATQHWVPAWWAGQTGILC*VACDWA Trigger: AGCCCAATCACACGCCACCAAGCACAAGATCCCGGT...CTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | CGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCTAGCTCCTTGTACTaGGCGGCAATGTCATTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RYLLHNTGSQLGGLDSGSPSSLY*AAMSFR Trigger: CCGGAATGACATTGCCGCCAAGTACAAGGAGCTAGG...GCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS CCA 90 bp | ACTTGGCGGCAATGTCATTCCGGAAGAGCTCCAGGGCCTTGCTCATaGCGCCCTGAGCATCTGCTCCAAAGTCCCCGGAATGTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TWRQCHSGRAPGPCS*RPEHLLQSPRNVSS Trigger: AGAAGAGACATTCCGGGGACTTTGGAGCAGATGCTCAGGGCGCCATGAGCAAGGCCCTGGAGCTCTTCCGGAATGACATTGCCGCCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | GCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCTACTTGACCGGGATCTaGTGCTTGGTGGCGTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ATCYTTLGPSLVGWTVGAYLTGI*CLVACD Trigger: ATCACACGCCACCAAGCACAAGATCCCGGTCAAGTA...GGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | GCCCCGTTTTCACCCTCCACTCCCTCTAAGCAACCCTCCATCTCGCCCAAAGGTCCTAGCTCCTTGTACTaGGCGGCAATGTCATTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: APFSPSTPSKQPSISPKGPSSLY*AAMSFR Trigger: CCGGAATGACATTGCCGCCAAGTACAAGGAGCTAGG...ACCTTTGGGCGAGATGGAGGGTTGCTTAGAGGGAGTGGAGGGTGAAAACGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 |
||
| CDS TCA 90 bp | CGGCAGCATGTTGTCCCTTCTTCTTCAGGATGGTACCCAGGGCTGTaGGCACGGTGCAACCATGCTTCTTCAGGTCCTCTGAGCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQHVVPSSSGWYPGL*ARCNHASSGPLSPS Trigger: TGAAGGGCTCAGAGGACCTGAAGAAGCATGGTTGCACCGTGCTCACAGCCCTGGGTACCATCCTGAAGAAGAAGGGACAACATGCTGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | GCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCGATCTCGGCAGCATGTaGTCCCTTCTTCTTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ATCYTTLGPSLVGWTVGADLGSM*SLLLQD Trigger: ATCCTGAAGAAGAAGGGACAACATGCTGCCGAGATC...GGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCATTACTTGACCGGGATCTaGTGCTTGGTGGCGTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TCYTTLGPSLVGWTVGAHYLTGI*CLVACD Trigger: ATCACACGCCACCAAGCACAAGATCCCGGTCAAGTA...ATGGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS CCA 90 bp | TTGACCGGGATCTTGTGCTTGGTGGCGTGTGATTGGGCTAGAGGCTaGATCTCGGCAGCATGTTGTCCCTTCTTCTTCAGGATGGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: LTGILCLVACDWARG*ISAACCPFFFRMVP Trigger: GGGTACCATCCTGAAGAAGAAGGGACAACATGCTGCCGAGATCCAGCCTCTAGCCCAATCACACGCCACCAAGCACAAGATCCCGGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGATACTTGACCGGGATCTaGTGCTTGGTGGCGTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TLHTLLATQHWVPAWWAGYLTGI*CLVACD Trigger: ATCACACGCCACCAAGCACAAGATCCCGGTCAAGTA...TCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCATGGATAAACTCCAGGTACTaGACCGGGATCTTGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLHNTGSQLGGLDSGSPWINSRY*TGILCL Trigger: CAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTAT...CCATGGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | CTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCATAAACTCCAGGTACTaGACCGGGATCTTGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLATQHWVPAWWAGQWEPINSRY*TGILCL Trigger: CAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTAT...GGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS CCA 90 bp | AACTCCAGGTACTTGACCGGGATCTTGTGCTTGGTGGCGTGTGATTaGGCTAGAGGCTGGATCTCGGCAGCATGTTGTCCCTTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSRYLTGILCLVACD*ARGWISAACCPFFF Trigger: GAAGAAGAAGGGACAACATGCTGCCGAGATCCAGCCTCTAGCCCAATCACACGCCACCAAGCACAAGATCCCGGTCAAGTACCTGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGAGATCTCGGCAGCATGTaGTCCCTTCTTCTTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TLHTLLATQHWVPAWWAGDLGSM*SLLLQD Trigger: ATCCTGAAGAAGAAGGGACAACATGCTGCCGAGATC...TCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAGAAGAAAATGGACTGGGACTTAGGAGACCTGAGCATGACCCGGCAGAGACCGGGATCTTGTGCTaGGTGGCGTGTGATTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KPEENGLGLRRPEHDPAETGILC*VACDWA Trigger: AGCCCAATCACACGCCACCAAGCACAAGATCCCGGT...CTCTGCCGGGTCATGCTCAGGTCTCCTAAGTCCCAGTCCATTTTCTTCTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | AGAACACTGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTTACTTGACCGGGATCTaGTGCTTGGTGGCGTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RTLHTLLATQHWVPAWWAYLTGI*CLVACD Trigger: ATCACACGCCACCAAGCACAAGATCCCGGTCAAGTA...AGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAGTGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGATAAACTCCAGGTACTaGACCGGGATCTTGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHTLLATQHWVPAWWAGQINSRY*TGILCL Trigger: CAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTAT...CTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | ACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGATAAACTCCAGGTACTaGACCGGGATCTTGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLLATQHWVPAWWAGQWEINSRY*TGILCL Trigger: CAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTAT...CTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCACTTTGCACCTCTGGGCTCCAGGGTAACACTGCCCAGAGCCCTGTCCTTCAAGTTCTTGAACTaGTCAAACTTATCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EGHFAPLGSRVTLPRALSFKFLN*SNLSRV Trigger: GACCCTGGATAAGTTTGACAAGTTCAAGAACTTGAA...GGACAGGGCTCTGGGCAGTGTTACCCTGGAGCCCAGAGGTGCAAAGTGGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 |
||
| CDS-3UTR CAA 90 bp | TCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCTACACACCGGGATCTTGTGCTaGGTGGCGTGTGATTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPLLFSANLEHCTRYLLHTGILC*VACDWA Trigger: AGCCCAATCACACGCCACCAAGCACAAGATCCCGGT...GTGTAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | CGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCTTCAAGTTCTTGAACTaGTCAAACTTATCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RYLLHNTGSQLGGLDSGSFKFLN*SNLSRV Trigger: GACCCTGGATAAGTTTGACAAGTTCAAGAACTTGAA...GCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
||
| CDS-3UTR CAA 90 bp | CTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCCCATGTTCAAGTTCTTGAACTaGTCAAACTTATCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LATQHWVPAWWAGQWEPMFKFLN*SNLSRV Trigger: GACCCTGGATAAGTTTGACAAGTTCAAGAACTTGAA...CATGGGCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCTACACAACACCGGGATCTTGTGCTaGGTGGCGTGTGATTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLLFSANLEHCTRYLLHNTGILC*VACDWA Trigger: AGCCCAATCACACGCCACCAAGCACAAGATCCCGGT...GTTGTGTAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | GATGCCACACTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACCTAGCTCCTTGTACTaGGCGGCAATGTCATTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DATLCSPLLFSANLEHCTPSSLY*AAMSFR Trigger: CCGGAATGACATTGCCGCCAAGTACAAGGAGCTAGG...TGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAGTGTGGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | CTATGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCCTAGCTCCTTGTACTaGGCGGCAATGTCATTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LCSPLLFSANLEHCTRYLPSSLY*AAMSFR Trigger: CCGGAATGACATTGCCGCCAAGTACAAGGAGCTAGG...CAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | CGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTGGGAGCTCTGACTTCAAGTTCTaGAACTTGTCAAACTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: RYLLHNTGSQLGGLDSGSSDFKF*NLSNLS Trigger: GGATAAGTTTGACAAGTTCAAGAACTTGAAGTCAGA...GCTCCCACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
||
| CDS GCA 90 bp | ATGATAATTTCTGAGATAAACTCCAGGTACTTGACCGGGATCTTGTaGTTGGTGGCGTGTGATTGGGCTAGAGGCTGGATCTCGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MIISEINSRYLTGIL*LVACDWARGWISAA Trigger: TGCTGCCGAGATCCAGCCTCTAGCCCAATCACACGCCACCAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTATCTCAGAAATTATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCCCCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCTAGATCTCGGCAGCATGTaGTCCCTTCTTCTTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CSPLLFSANLEHCTRYLLDLGSM*SLLLQD Trigger: ATCCTGAAGAAGAAGGGACAACATGCTGCCGAGATC...TAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGGGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
||
| CDS-3UTR CAA 90 bp | TGCACACGCTACTTGCTACACAACACTGGGTCCCAGCTTGGTGGGCTGGACAGTTCTGACTTCAAGTTCTaGAACTTGTCAAACTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: CTRYLLHNTGSQLGGLDSSDFKF*NLSNLS Trigger: GGATAAGTTTGACAAGTTCAAGAACTTGAAGTCAGA...ACTGTCCAGCCCACCAAGCTGGGACCCAGTGTTGTGTAGCAAGTAGCGTGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 |
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| CDS-3UTR CAA 90 bp | CCTCTTCTGTTCTCTGCTAACCTAGAACACTGCACACGCTACTTGCTACACAACGATCTCGGCAGCATGTaGTCCCTTCTTCTTCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: PLLFSANLEHCTRYLLHNDLGSM*SLLLQD Trigger: ATCCTGAAGAAGAAGGGACAACATGCTGCCGAGATC...GTTGTGTAGCAAGTAGCGTGTGCAGTGTTCTAGGTTAGCAGAGAACAGAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS TCA 90 bp | GACTTCAAGTTCTTGAACTTGTCAAACTTATCCAGGGTCTCAGGGTaGGTCTTAAACAGACCGATGAGGACTTCCTGTCCATGGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: DFKFLNLSNLSRVSG*VLNRPMRTSCPWPA Trigger: TGCTGGCCATGGACAGGAAGTCCTCATCGGTCTGTTTAAGACTCACCCTGAGACCCTGGATAAGTTTGACAAGTTCAAGAACTTGAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229125.2 ENSMUST00000229423.2 |
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| CDS TCA 90 bp | AAAGTCCCCGGAATGTCTCTTCTTCAGGACTTCAATGATAATTTCTaGGATAAACTCCAGGTACTTGACCGGGATCTTGTGCTTGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: KVPGMSLLQDFNDNF*DKLQVLDRDLVLGG Trigger: GCCACCAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTATCTCAGAAATTATCATTGAAGTCCTGAAGAAGAGACATTCCGGGGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS GCA 72 bp | GAGCTCCAGGGCCTTGCTCATGGCGCCCTGAGCATCTaGTCCAAAGTCCCCGGAATGTCTCTTCTTCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: ELQGLAHGALSI*SKVPGMSLLQD Trigger: GTCCTGAAGAAGAGACATTCCGGGGACTTTGGAGCAGATGCTCAGGGCGCCATGAGCAAGGCCCTGGAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS CCA 72 bp | TACTTGACCGGGATCTTGTGCTTGGTGGCGTGTGATTaGGCTAGAGGCTGGATCTCGGCAGCATGTTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: YLTGILCLVACD*ARGWISAACCP Trigger: GGGACAACATGCTGCCGAGATCCAGCCTCTAGCCCAATCACACGCCACCAAGCACAAGATCCCGGTCAAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS GCA 72 bp | AGGATGGTACCCAGGGCTGTGAGCACGGTGCAACCATaGTTCTTCAGGTCCTCTGAGCCCTTCATATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RMVPRAVSTVQP*FFRSSEPFISS Trigger: GGAAGATATGAAGGGCTCAGAGGACCTGAAGAAGCATGGTTGCACCGTGCTCACAGCCCTGGGTACCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229125.2 ENSMUST00000229423.2 |
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| CDS CCA 72 bp | ATCTTGTGCTTGGTGGCGTGTGATTGGGCTAGAGGCTaGATCTCGGCAGCATGTTGTCCCTTCTTCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: ILCLVACDWARG*ISAACCPFFFR Trigger: CCTGAAGAAGAAGGGACAACATGCTGCCGAGATCCAGCCTCTAGCCCAATCACACGCCACCAAGCACAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS CAA 72 bp | GAGATAAACTCCAGGTACTTGACCGGGATCTTGTGCTaGGTGGCGTGTGATTGGGCTAGAGGCTGGATCTCG | + |
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Preference number: 6 (lower is better) Translates to: EINSRYLTGILC*VACDWARGWIS Trigger: CGAGATCCAGCCTCTAGCCCAATCACACGCCACCAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS GCA 72 bp | TCTGAGATAAACTCCAGGTACTTGACCGGGATCTTGTaGTTGGTGGCGTGTGATTGGGCTAGAGGCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: SEINSRYLTGIL*LVACDWARGWI Trigger: GATCCAGCCTCTAGCCCAATCACACGCCACCAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTATCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS CAA 72 bp | ATTTCTGAGATAAACTCCAGGTACTTGACCGGGATCTaGTGCTTGGTGGCGTGTGATTGGGCTAGAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ISEINSRYLTGI*CLVACDWARGW Trigger: CCAGCCTCTAGCCCAATCACACGCCACCAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTATCTCAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS CAA 90 bp | ATAATTTCTGAGATAAACTCCAGGTACTTGACCGGGATCTTGTGCTaGGTGGCGTGTGATTGGGCTAGAGGCTGGATCTCGGCAGCATGT | + |
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Preference number: 6 (lower is better) Translates to: IISEINSRYLTGILC*VACDWARGWISAAC Trigger: ACATGCTGCCGAGATCCAGCCTCTAGCCCAATCACACGCCACCAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTATCTCAGAAATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS CAA 90 bp | TCAATGATAATTTCTGAGATAAACTCCAGGTACTTGACCGGGATCTaGTGCTTGGTGGCGTGTGATTGGGCTAGAGGCTGGATCTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: SMIISEINSRYLTGI*CLVACDWARGWISA Trigger: TGCCGAGATCCAGCCTCTAGCCCAATCACACGCCACCAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTATCTCAGAAATTATCATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS CAA 90 bp | TTCTTCAGGACTTCAATGATAATTTCTGAGATAAACTCCAGGTACTaGACCGGGATCTTGTGCTTGGTGGCGTGTGATTGGGCTAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: FFRTSMIISEINSRY*TGILCLVACDWARG Trigger: GCCTCTAGCCCAATCACACGCCACCAAGCACAAGATCCCGGTCAAGTACCTGGAGTTTATCTCAGAAATTATCATTGAAGTCCTGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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| CDS TCA 72 bp | TTCTTGAACTTGTCAAACTTATCCAGGGTCTCAGGGTaGGTCTTAAACAGACCGATGAGGACTTCCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: FLNLSNLSRVSG*VLNRPMRTSCP Trigger: TGGACAGGAAGTCCTCATCGGTCTGTTTAAGACTCACCCTGAGACCCTGGATAAGTTTGACAAGTTCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229125.2 ENSMUST00000229423.2 |
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| CDS TCA 72 bp | GGAATGTCTCTTCTTCAGGACTTCAATGATAATTTCTaGGATAAACTCCAGGTACTTGACCGGGATCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GMSLLQDFNDNF*DKLQVLDRDLV Trigger: CACAAGATCCCGGTCAAGTACCTGGAGTTTATCTCAGAAATTATCATTGAAGTCCTGAAGAAGAGACATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019037.10 ENSMUST00000166179.9 ENSMUST00000169226.9 ENSMUST00000229423.2 ENSMUST00000230031.2 |
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