Pregenerated sensors for MAX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059436Ensembl transcript IDs: ENSMUST00000082136.7, ENSMUST00000110395.11, ENSMUST00000218640.2, ENSMUST00000218653.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCACCCACATAGCCACCCCCACTCCTGAGAGCCGTTCGTTTCACTaGCGCCGTCTCCTATACATACATACCAGCGTCCCGTGGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: PTHIATPTPESRSFH*RRLLYIHTSVPWPS Trigger: AGAAGGCCACGGGACGCTGGTATGTATGTATAGGAGACGGCGGCAGTGAAACGAACGGCTCTCAGGAGTGGGGGTGGCTATGTGGGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR TCA 90 bp | CCTAAGACTCCCTCCCAGCCCCACCCACATAGCCACCCCCACTCCTaGGAGCCGTTCGTTTCACTGCCGCCGTCTCCTATACATACATAC | + |
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Preference number: 1 (lower is better) Translates to: PKTPSQPHPHSHPHS*EPFVSLPPSPIHTY Trigger: GTATGTATGTATAGGAGACGGCGGCAGTGAAACGAACGGCTCTCAGGAGTGGGGGTGGCTATGTGGGTGGGGCTGGGAGGGAGTCTTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR CCA 90 bp | GGCTGGGTCTTCAGGCTTAAACAGCCGAAGTTACAGACTGTGCCATaGGTGCTGCAAATCTGTCCCCACTTTCCTTTTCTACCACACAAA | + |
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Preference number: 1 (lower is better) Translates to: GWVFRLKQPKLQTVP*VLQICPHFPFLPHK Trigger: TTTGTGTGGTAGAAAAGGAAAGTGGGGACAGATTTGCAGCACCCATGGCACAGTCTGTAACTTCGGCTGTTTAAGCCTGAAGACCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR GCA 90 bp | GGGTCTTCAGGCTTAAACAGCCGAAGTTACAGACTGTGCCATGGGTaGTGCAAATCTGTCCCCACTTTCCTTTTCTACCACACAAACTTC | + |
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Preference number: 1 (lower is better) Translates to: GSSGLNSRSYRLCHG*CKSVPTFLFYHTNF Trigger: GAAGTTTGTGTGGTAGAAAAGGAAAGTGGGGACAGATTTGCAGCACCCATGGCACAGTCTGTAACTTCGGCTGTTTAAGCCTGAAGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCTGACACAGGGAAGGGGATaGGAGCTGTTGTCCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: ELVGWAGHRVLRGLAGRLTQGRG*ELLSKS Trigger: GCTCTTGGACAACAGCTCTCATCCCCTTCCCTGTGT...CAGACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCGTCCCGTGGCCTTCTGGAAGGCTGGGTCTTCAGGCTTAAACAGCCGAAGTCCAGGCACGTGCTCTaGGGGCTGGAGGAGCTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: PASRGLLEGWVFRLKQPKSRHVL*GLEELV Trigger: TACCAGCTCCTCCAGCCCTCAGAGCACGTGCCTGGA...CTTCGGCTGTTTAAGCCTGAAGACCCAGCCTTCCAGAAGGCCACGGGACGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGGGAGGAGCTGGTAGGGTaGGCAGGACACCGTGTACTC | + |
|
Preference number: 2 (lower is better) Translates to: SRKVQSHKVHQTEVREDWEELVG*AGHRVL Trigger: GAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTC...CCAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGACACAGGGAAGGGGATaGGAGCTGTTGTCCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KQKSSESQSPPNRGEGGLTQGRG*ELLSKS Trigger: GCTCTTGGACAACAGCTCTCATCCCCTTCCCTGTGT...CAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR-3UTR CCA 90 bp | AATCTGTCGCTTTACAATATCGACATCATCAGAAATAGGGGGCATTTCATTCAGCGTCCCGTGGCCTTCTaGAAGGCTGGGTCTTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: NLSLYNIDIIRNRGHFIQRPVAF*KAGSSG Trigger: GCCTGAAGACCCAGCCTTCCAGAAGGCCACGGGACG...CTGAATGAAATGCCCCCTATTTCTGATGATGTCGATATTGTAAAGCGACAGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR-3UTR TCA 90 bp | TGGTCTGCAGTTGGGCACTTGATCTTGCCTTCTCCAGTGCACGGAATTTCCTTTTACTTGCATCTTCCATaGGGGAGGAAGAGAAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: WSAVGHLILPSPVHGISFYLHLP*GRKRSE Trigger: TTCACTTCTCTTCCTCCCTCATGGAAGATGCAAGTA...AAAGGAAATTCCGTGCACTGGAGAAGGCAAGATCAAGTGCCCAACTGCAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218653.2 |
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| 3UTR-3UTR CCA 90 bp | AATCTGTCGCTTTACAATATCGACATCATCAGAAATAGGGGGCATTTCATTCAGGAGGAGCTGGTAGGGTaGGCAGGACACCGTGTACTC | + |
|
Preference number: 2 (lower is better) Translates to: NLSLYNIDIIRNRGHFIQEELVG*AGHRVL Trigger: GAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTC...CTGAATGAAATGCCCCCTATTTCTGATGATGTCGATATTGTAAAGCGACAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR CAA 90 bp | CTTACAAAGGAGGGAGTGAGTTCTGATTACTCCAATCAGGTCTTCTaGCCAAAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGA | + |
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Preference number: 2 (lower is better) Translates to: LTKEGVSSDYSNQVF*PKQKSSESQSPPNR Trigger: TCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAAGAAGACCTGATTGGAGTAATCAGAACTCACTCCCTCCTTTGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR-3UTR GCA 90 bp | AATCTGTCGCTTTACAATATCGACATCATCAGAAATAGGGGGCATTTCATTCAGCGAAGTTACAGACTGTaGCATGGGTGCTGCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: NLSLYNIDIIRNRGHFIQRSYRL*HGCCKS Trigger: AGATTTGCAGCACCCATGGCACAGTCTGTAACTTCG...CTGAATGAAATGCCCCCTATTTCTGATGATGTCGATATTGTAAAGCGACAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR CCA 72 bp | ACATACATACCAGCGTCCCGTGGCCTTCTGGAAGGCTaGGTCTTCAGGCTTAAACAGCCGAAGTTACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: TYIPASRGLLEG*VFRLKQPKLQT Trigger: AGTCTGTAACTTCGGCTGTTTAAGCCTGAAGACCCAGCCTTCCAGAAGGCCACGGGACGCTGGTATGTATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR CCA 72 bp | TCTCCTATACATACATACCAGCGTCCCGTGGCCTTCTaGAAGGCTGGGTCTTCAGGCTTAAACAGCCGAAGT | + |
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Preference number: 3 (lower is better) Translates to: SPIHTYQRPVAF*KAGSSGLNSRS Trigger: ACTTCGGCTGTTTAAGCCTGAAGACCCAGCCTTCCAGAAGGCCACGGGACGCTGGTATGTATGTATAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR-3UTR CAA 90 bp | TTGCCAAAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGAGTCGACAGTTTTATaGCTGGCCTGCCCCGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LPKQKSSESQSPPNRGEGESTVL*LACPAW Trigger: CCATGCGGGGCAGGCCAGCAATAAAACTGTCGACTC...TCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR GCA 72 bp | GGCTTAAACAGCCGAAGTTACAGACTGTGCCATGGGTaGTGCAAATCTGTCCCCACTTTCCTTTTCTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLNSRSYRLCHG*CKSVPTFLFYH Trigger: GTGGTAGAAAAGGAAAGTGGGGACAGATTTGCAGCACCCATGGCACAGTCTGTAACTTCGGCTGTTTAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR-3UTR CAA 90 bp | AATCTGTCGCTTTACAATATCGACATCATCAGAAATAGGGGGCATTTCATTCAGGAGTCGACAGTTTTATaGCTGGCCTGCCCCGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: NLSLYNIDIIRNRGHFIQESTVL*LACPAW Trigger: CCATGCGGGGCAGGCCAGCAATAAAACTGTCGACTC...CTGAATGAAATGCCCCCTATTTCTGATGATGTCGATATTGTAAAGCGACAGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR CCA 72 bp | TTCAGGCTTAAACAGCCGAAGTTACAGACTGTGCCATaGGTGCTGCAAATCTGTCCCCACTTTCCTTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FRLKQPKLQTVP*VLQICPHFPFL Trigger: TAGAAAAGGAAAGTGGGGACAGATTTGCAGCACCCATGGCACAGTCTGTAACTTCGGCTGTTTAAGCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR GCA 90 bp | GAGGAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCGAAGGCAGAGATGGTaGCGCCCTTGGCGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EELVGWAGHRVLRGLAGRRRQRW*RPWRWC Trigger: ACACCAACGCCAAGGGCGGCACCATCTCTGCCTTCG...ACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR GCA 90 bp | GTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCTGTCCTCCCGAAGGCAGAGATGGTaGCGCCCTTGGCGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGWAGHRVLRGLAGRLSSRRQRW*RPWRWC Trigger: ACACCAACGCCAAGGGCGGCACCATCTCTGCCTTCG...GGAGGACAGACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CCA 90 bp | GAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCTGCATCGAAGGCAGAGATaGTGCCGCCCTTGGCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: ELVGWAGHRVLRGLAGRLHRRQR*CRPWRW Trigger: CCAACGCCAAGGGCGGCACCATCTCTGCCTTCGATG...CAGACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR TCA 90 bp | GTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCTGTCCTCCCGGGATGCCGCAGATTaGAACCTCGGTTGCTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: VGWAGHRVLRGLAGRLSSRDAAD*NLGCSS Trigger: CGAAGAGCAACCGAGGTTTCAATCTGCGGCATCCCG...GGAGGACAGACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218640.2 |
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| CDS-3UTR TCA 90 bp | GAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCTGCTGCAGTTGGGCACTTaGTCTTGCCTTCTCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: ELVGWAGHRVLRGLAGRLLQLGT*SCLLQC Trigger: GCACTGGAGAAGGCAAGATCAAGTGCCCAACTGCAG...CAGACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCTGAGGAGGGGTAGTTaGTCTGCAGTTGGGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: EELVGWAGHRVLRGLAGRLRRGS*SAVGHL Trigger: CAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAG...ACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CCA 90 bp | CCAGCGTCCCGTGGCCTTCTGGAAGGCTGGGTCTTCAGGCTTAAACAGCCGAAGCATCGAAGGCAGAGATaGTGCCGCCCTTGGCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PASRGLLEGWVFRLKQPKHRRQR*CRPWRW Trigger: CCAACGCCAAGGGCGGCACCATCTCTGCCTTCGATG...CTTCGGCTGTTTAAGCCTGAAGACCCAGCCTTCCAGAAGGCCACGGGACGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR GCA 90 bp | GTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCTGTCCTCCAGTGCACGGACTTGTTaGTCCAGAAGAGCATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VGWAGHRVLRGLAGRLSSSARTC*SRRAFC Trigger: GCAGAATGCTCTTCTGGAGCAACAAGTCCGTGCACT...GGAGGACAGACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTTCAATGTCTTGCTGGTaGGTATGGTTTTTCCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: EELVGWAGHRVLRGLAGRSMSCW*VWFFLR Trigger: GCGAAGGAAAAACCATACGCACCAGCAAGACATTGA...ACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR TCA 90 bp | AAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCTGCCCCGCATGGCTGCAGTTGGGCACTTaGTCTTGCCTTCTCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: KEDATRESTVLLLACPAWLQLGT*SCLLQC Trigger: GCACTGGAGAAGGCAAGATCAAGTGCCCAACTGCAG...CCATGCGGGGCAGGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTAGGTCATCAATGTCTTaGTGGTGCGTATGGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: EELVGWAGHRVLRGLAGRRSSMS*WCVWFF Trigger: GAAAAACCATACGCACCAGCAAGACATTGATGACCT...ACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CCA 90 bp | GAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCTGTCATCAATGTCTTGCTaGTGCGTATGGTTTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: ELVGWAGHRVLRGLAGRLSSMSC*CVWFFL Trigger: AAGGAAAAACCATACGCACCAGCAAGACATTGATGA...CAGACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTTCATCAATGTCTTGCTaGTGCGTATGGTTTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: EELVGWAGHRVLRGLAGRSSMSC*CVWFFL Trigger: AAGGAAAAACCATACGCACCAGCAAGACATTGATGA...ACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR GCA 90 bp | AAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCTGCCCCGCATGGACGTTTTCGTTCCAGTaGATTATGGTGAGCCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: KEDATRESTVLLLACPAWTFSFQ*IMVSPL Trigger: AAGCGGGCTCACCATAATGCACTGGAACGAAAACGT...CCATGCGGGGCAGGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR TCA 90 bp | AAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGGTAGAGGCTGTTGTCTaGGGAGGGGTAGTTGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KQKSSESQSPPNRGEGGLVEAVV*GGVVGL Trigger: CAGACCAACTACCCCTCCTCAGACAACAGCCTCTAC...CAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR TCA 90 bp | AATGATGAACAGAAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCGTAGAGGCTGTTGTCTaGGGAGGGGTAGTTGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: NDEQKEDATRESTVLLLAVEAVV*GGVVGL Trigger: CAGACCAACTACCCCTCCTCAGACAACAGCCTCTAC...GGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTTCTGTTCATCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR GCA 90 bp | AAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCTGCCCCGCATGGAGGTCATCAATGTCTTaGTGGTGCGTATGGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: KEDATRESTVLLLACPAWRSSMS*WCVWFF Trigger: GAAAAACCATACGCACCAGCAAGACATTGATGACCT...CCATGCGGGGCAGGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CCA 90 bp | AAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGCTGAGGAGGGGTAGTTaGTCTGCAGTTGGGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: KQKSSESQSPPNRGEGGLLRRGS*SAVGHL Trigger: CAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAG...CAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CCA 90 bp | AATGATGAACAGAAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCGCTTTGTCTAGGATTTaGGCCCGGGATGCCGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: NDEQKEDATRESTVLLLAALSRI*ARDAAD Trigger: ATCTGCGGCATCCCGGGCCCAAATCCTAGACAAAGC...GGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTTCTGTTCATCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218640.2 |
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| CDS-3UTR TCA 90 bp | TTGCCAAAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGACTGCAGTTGGGCACTTaGTCTTGCCTTCTCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LPKQKSSESQSPPNRGEGLQLGT*SCLLQC Trigger: GCACTGGAGAAGGCAAGATCAAGTGCCCAACTGCAG...TCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR TCA 90 bp | AAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGTTGTCAGCCGCAGATTaGAACCTCGGTTGCTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: KQKSSESQSPPNRGEGGLLSAAD*NLGCSS Trigger: CGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAA...CAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110395.11 |
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| CDS-3UTR GCA 90 bp | AGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGGAGTGCACGGACTTGTTaGTCCAGAAGAGCATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SRKVQSHKVHQTEVREDWSARTC*SRRAFC Trigger: GCAGAATGCTCTTCTGGAGCAACAAGTCCGTGCACT...CCAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR GCA 90 bp | GGAGTGAGTTCTGATTACTCCAATCAGGTCTTCTTGCCAAAGCAGAAAAGTTCACGAAGGCAGAGATGGTaGCGCCCTTGGCGTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GVSSDYSNQVFLPKQKSSRRQRW*RPWRWC Trigger: ACACCAACGCCAAGGGCGGCACCATCTCTGCCTTCG...TGAACTTTTCTGCTTTGGCAAGAAGACCTGATTGGAGTAATCAGAACTCACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CCA 90 bp | AATGATGAACAGAAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCGCTTTGTCTAGGATTTaGGCCCGGGATGCCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: NDEQKEDATRESTVLLLAALSRI*ARDAFS Trigger: AGAGAAGGCATCCCGGGCCCAAATCCTAGACAAAGC...GGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTTCTGTTCATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR GCA 90 bp | AATGATGAACAGAAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCAGTGCACGGACTTGTTaGTCCAGAAGAGCATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NDEQKEDATRESTVLLLASARTC*SRRAFC Trigger: GCAGAATGCTCTTCTGGAGCAACAAGTCCGTGCACT...GGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTTCTGTTCATCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CCA 90 bp | AGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGGAAGCTGTCTTTGATGTaGTCCCTACGTTTTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRKVQSHKVHQTEVREDWKLSLM*SLRFRS Trigger: GGAACGAAAACGTAGGGACCACATCAAAGACAGCTT...CCAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR GCA 90 bp | CTCCAATCAGGTCTTCTTGCCAAAGCAGAAAAGTTCAGAGTCACAAAGTCCACCACGTTTTCGTTCCAGTaGATTATGGTGAGCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQSGLLAKAEKFRVTKSTTFSFQ*IMVSPL Trigger: AAGCGGGCTCACCATAATGCACTGGAACGAAAACGT...GGTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAAGAAGACCTGATTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR GCA 90 bp | AATGATGAACAGAAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCTCAATGTCTTGCTGGTaGGTATGGTTTTTCCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NDEQKEDATRESTVLLLASMSCW*VWFFLR Trigger: GCGAAGGAAAAACCATACGCACCAGCAAGACATTGA...GGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTTCTGTTCATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR GCA 90 bp | AGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGGAGGTCATCAATGTCTTaGTGGTGCGTATGGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRKVQSHKVHQTEVREDWRSSMS*WCVWFF Trigger: GAAAAACCATACGCACCAGCAAGACATTGATGACCT...CCAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CCA 90 bp | AGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGGTCTTGCTGGTGCGTATaGTTTTTCCTTCGCATATAC | + |
|
Preference number: 4 (lower is better) Translates to: SRKVQSHKVHQTEVREDWSCWCV*FFLRIY Trigger: GTATATGCGAAGGAAAAACCATACGCACCAGCAAGA...CCAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR GCA 90 bp | TTGCCAAAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGATCAATGTCTTGCTGGTaGGTATGGTTTTTCCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPKQKSSESQSPPNRGEGSMSCW*VWFFLR Trigger: GCGAAGGAAAAACCATACGCACCAGCAAGACATTGA...TCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CCA 90 bp | CTCCAATCAGGTCTTCTTGCCAAAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAGCTGTCTTTGATGTaGTCCCTACGTTTTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSGLLAKAEKFRVTKSTKLSLM*SLRFRS Trigger: GGAACGAAAACGTAGGGACCACATCAAAGACAGCTT...GGTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAAGAAGACCTGATTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CCA 90 bp | AGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGGTCATCAATGTCTTGCTaGTGCGTATGGTTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKVQSHKVHQTEVREDWSSMSC*CVWFFL Trigger: AAGGAAAAACCATACGCACCAGCAAGACATTGATGA...CCAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| 3UTR CAA 72 bp | GAGGGAGTGAGTTCTGATTACTCCAATCAGGTCTTCTaGCCAAAGCAGAAAAGTTCAGAGTCACAAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGVSSDYSNQVF*PKQKSSESQSP Trigger: TGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAAGAAGACCTGATTGGAGTAATCAGAACTCACTCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CCA 90 bp | AATCTGTCGCTTTACAATATCGACATCATCAGAAATAGGGGGCATTTCATTCAGTCTTGCTGGTGCGTATaGTTTTTCCTTCGCATATAC | + |
|
Preference number: 4 (lower is better) Translates to: NLSLYNIDIIRNRGHFIQSCWCV*FFLRIY Trigger: GTATATGCGAAGGAAAAACCATACGCACCAGCAAGA...CTGAATGAAATGCCCCCTATTTCTGATGATGTCGATATTGTAAAGCGACAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CAA 90 bp | GAGGAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTGTTGGGCACTTGATCTaGCCTTCTCCAGTGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: EELVGWAGHRVLRGLAGRVGHLI*PSPVHG Trigger: TCCGTGCACTGGAGAAGGCAAGATCAAGTGCCCAAC...ACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGCTGGTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCAGTGCACGGACTTGTaGCTCCAGAAGAGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EELVGWAGHRVLRGLAGRQCTDL*LQKSIL Trigger: CAGAATGCTCTTCTGGAGCAACAAGTCCGTGCACTG...ACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTACCAGCTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CAA 90 bp | GTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCTGTCCTCCTCTGCAGTTGGGCACTaGATCTTGCCTTCTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGWAGHRVLRGLAGRLSSSAVGH*ILPSPV Trigger: CACTGGAGAAGGCAAGATCAAGTGCCCAACTGCAGA...GGAGGACAGACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CAA 90 bp | GTAGGGTGGGCAGGACACCGTGTACTCAGAGGTCTGGCCGGCCGTCTGTCCTCCAGATTGAAACCTCGGTaGCTCTTCGTCGCTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VGWAGHRVLRGLAGRLSSRLKPR*LFVALH Trigger: GTGGAGAGCGACGAAGAGCAACCGAGGTTTCAATCT...GGAGGACAGACGGCCGGCCAGACCTCTGAGTACACGGTGTCCTGCCCACCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CAA 90 bp | CCAGCGTCCCGTGGCCTTCTGGAAGGCTGGGTCTTCAGGCTTAAACAGCCGAAGTCTGCAGTTGGGCACTaGATCTTGCCTTCTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PASRGLLEGWVFRLKQPKSAVGH*ILPSPV Trigger: CACTGGAGAAGGCAAGATCAAGTGCCCAACTGCAGA...CTTCGGCTGTTTAAGCCTGAAGACCCAGCCTTCCAGAAGGCCACGGGACGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CAA 90 bp | AAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCTGCCCCGCATGGGTTGGGCACTTGATCTaGCCTTCTCCAGTGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: KEDATRESTVLLLACPAWVGHLI*PSPVHG Trigger: TCCGTGCACTGGAGAAGGCAAGATCAAGTGCCCAAC...CCATGCGGGGCAGGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CAA 90 bp | AAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCTGCCCCGCATGGCAGTGCACGGACTTGTaGCTCCAGAAGAGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KEDATRESTVLLLACPAWQCTDL*LQKSIL Trigger: CAGAATGCTCTTCTGGAGCAACAAGTCCGTGCACTG...CCATGCGGGGCAGGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CAA 90 bp | AAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCTGCCCCGCATGGATATACTCTGTTGCTTaGTCTAGGATTTGGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KEDATRESTVLLLACPAWIYSVA*SRIWAR Trigger: CCGGGCCCAAATCCTAGACAAAGCAACAGAGTATAT...CCATGCGGGGCAGGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CAA 90 bp | AATGATGAACAGAAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCCCGGGATGCCGCAGATaGAAACCTCGGTTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NDEQKEDATRESTVLLLAPGCRR*KPRLLF Trigger: GAAGAGCAACCGAGGTTTCAATCTGCGGCATCCCGG...GGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTTCTGTTCATCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218640.2 |
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| CDS-3UTR CAA 90 bp | AAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGGTTGGGCACTTGATCTaGCCTTCTCCAGTGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: KQKSSESQSPPNRGEGGLVGHLI*PSPVHG Trigger: TCCGTGCACTGGAGAAGGCAAGATCAAGTGCCCAAC...CAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CAA 90 bp | AATGATGAACAGAAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCCAGTGCACGGACTTGTaGCTCCAGAAGAGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NDEQKEDATRESTVLLLAQCTDL*LQKSIL Trigger: CAGAATGCTCTTCTGGAGCAACAAGTCCGTGCACTG...GGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTTCTGTTCATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CAA 90 bp | TCTTGCCAAAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGTCTGCAGTTGGGCACTaGATCTTGCCTTCTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SCQSRKVQSHKVHQTEVRSAVGH*ILPSPV Trigger: CACTGGAGAAGGCAAGATCAAGTGCCCAACTGCAGA...CCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CAA 90 bp | TCTTGCCAAAGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGCTTGTCAGCCGCAGATaGAAACCTCGGTTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCQSRKVQSHKVHQTEVRLVSRR*KPRLLF Trigger: GAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAG...CCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110395.11 |
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| CDS-3UTR CAA 90 bp | AATGATGAACAGAAGGAGGATGCGACGAGAGAGTCGACAGTTTTATTGCTGGCCATATACTCTGTTGCTTaGTCTAGGATTTGGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: NDEQKEDATRESTVLLLAIYSVA*SRIWAR Trigger: CCGGGCCCAAATCCTAGACAAAGCAACAGAGTATAT...GGCCAGCAATAAAACTGTCGACTCTCTCGTCGCATCCTCCTTCTGTTCATCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 ENSMUST00000218640.2 |
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| CDS-3UTR CAA 90 bp | AGCAGAAAAGTTCAGAGTCACAAAGTCCACCAAACAGAGGTGAGGGAGGACTGGACTGGATATACTCTGTaGCTTTGTCTAGGATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRKVQSHKVHQTEVREDWTGYTL*LCLGFG Trigger: CCCAAATCCTAGACAAAGCAACAGAGTATATCCAGT...CCAGTCCTCCCTCACCTCTGTTTGGTGGACTTTGTGACTCTGAACTTTTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CAA 90 bp | GGAGTGAGTTCTGATTACTCCAATCAGGTCTTCTTGCCAAAGCAGAAAAGTTCAATATACTCTGTTGCTTaGTCTAGGATTTGGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GVSSDYSNQVFLPKQKSSIYSVA*SRIWAR Trigger: CCGGGCCCAAATCCTAGACAAAGCAACAGAGTATAT...TGAACTTTTCTGCTTTGGCAAGAAGACCTGATTGGAGTAATCAGAACTCACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CAA 90 bp | CTCCAATCAGGTCTTCTTGCCAAAGCAGAAAAGTTCAGAGTCACAAAGTCCACCACTGGATATACTCTGTaGCTTTGTCTAGGATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LQSGLLAKAEKFRVTKSTTGYTL*LCLGFG Trigger: CCCAAATCCTAGACAAAGCAACAGAGTATATCCAGT...GGTGGACTTTGTGACTCTGAACTTTTCTGCTTTGGCAAGAAGACCTGATTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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| CDS-3UTR CAA 90 bp | AATCTGTCGCTTTACAATATCGACATCATCAGAAATAGGGGGCATTTCATTCAGAGATTGAAACCTCGGTaGCTCTTCGTCGCTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NLSLYNIDIIRNRGHFIQRLKPR*LFVALH Trigger: GTGGAGAGCGACGAAGAGCAACCGAGGTTTCAATCT...CTGAATGAAATGCCCCCTATTTCTGATGATGTCGATATTGTAAAGCGACAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110395.11 |
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| CDS CCA 72 bp | ATATACTGGATATACTCTGTTGCTTTGTCTAGGATTTaGGCCCGGGATGCCTTCTCTCCTTGGAGTGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: IYWIYSVALSRI*ARDAFSPWSDG Trigger: CCCATCACTCCAAGGAGAGAAGGCATCCCGGGCCCAAATCCTAGACAAAGCAACAGAGTATATCCAGTATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082136.7 ENSMUST00000110395.11 |
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