Pregenerated sensors for MAVS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037523Ensembl transcript IDs: ENSMUST00000041362.12, ENSMUST00000110199.3, ENSMUST00000130597.8
Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGACATCCTCGCGACGGCCCCGGAGTTGGTCTGGAGGAGTTGCTCTaGATTCTCTACTGGGGACTCTGGTGGCTGGGTGTCCTGGACAGG | + |
Preference number: 1 (lower is better) Translates to: RHPRDGPGVGLEELL*ILYWGLWWLGVLDR Trigger: CCTGTCCAGGACACCCAGCCACCAGAGTCCCCAGTAGAGAATTCAGAGCAACTCCTCCAGACCAACTCCGGGGCCGTCGCGAGGATGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 90 bp | ATCTGCAGTGCCCGGATGAAGACCTCCACCCAGCCAGGCCGGCGCTaGAGATTATTGAAGAGTCCCCAGAGTGTGTCCCGGTTCCCGATC | + |
Preference number: 1 (lower is better) Translates to: ICSARMKTSTQPGRR*RLLKSPQSVSRFPI Trigger: GATCGGGAACCGGGACACACTCTGGGGACTCTTCAATAATCTCCAGCGCCGGCCTGGCTGGGTGGAGGTCTTCATCCGGGCACTGCAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR GCA 90 bp | GCTGAGGCTTCACTGGGCCAGGCGCCTACTACGGTACAGCATCACTaGCAGGAATACAGCCAAGAGTGCACTGGTGGCCCCAAGCCACTT | + |
Preference number: 1 (lower is better) Translates to: AEASLGQAPTTVQHH*QEYSQECTGGPKPL Trigger: AAGTGGCTTGGGGCCACCAGTGCACTCTTGGCTGTATTCCTGGCAGTGATGCTGTACCGTAGTAGGCGCCTGGCCCAGTGAAGCCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR TCA 90 bp | AGCCAAGAGTGCACTGGTGGCCCCAAGCCACTTAGCCCAGGGCATTaGACTGGCACAATGTTCTTCCTCTTCTTGGGGCTGCTGGGTGGC | + |
Preference number: 1 (lower is better) Translates to: SQECTGGPKPLSPGH*TGTMFFLFLGLLGG Trigger: GCCACCCAGCAGCCCCAAGAAGAGGAAGAACATTGTGCCAGTTCAATGCCCTGGGCTAAGTGGCTTGGGGCCACCAGTGCACTCTTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR GCA 90 bp | TGGAAGGGGCTGGAAGGAAACGGTTGGAGACACAGGTCCATAGGTTaGTATGGGAACAGAGGCAACATTTGCTGCGTGGGCGCCACCCAG | + |
Preference number: 1 (lower is better) Translates to: WKGLEGNGWRHRSIG*YGNRGNICCVGATQ Trigger: CTGGGTGGCGCCCACGCAGCAAATGTTGCCTCTGTTCCCATAGCAACCTATGGACCTGTGTCTCCAACCGTTTCCTTCCAGCCCCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 90 bp | TGGACCCTCCGGGGTCTCCTTGGCTTGCTTGCTGTTCCTCTCAGGTaGTATTGTGTTGGCAGGTGCTTTGGCCACACTAGCAGGCACTCT | + |
Preference number: 1 (lower is better) Translates to: WTLRGLLGLLAVPLR*YCVGRCFGHTSRHS Trigger: AGAGTGCCTGCTAGTGTGGCCAAAGCACCTGCCAACACAATACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 90 bp | GCTATTTGGTCCAGTCTGGTTGCCTCCAGTGGTGACTTTGGTTGCTaGACCCTCCGGGGTCTCCTTGGCTTGCTTGCTGTTCCTCTCAGG | + |
Preference number: 1 (lower is better) Translates to: AIWSSLVASSGDFGC*TLRGLLGLLAVPLR Trigger: CCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGGTCCAGCAACCAAAGTCACCACTGGAGGCAACCAGACTGGACCAAATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 90 bp | GTCTGGAGGAGTTGCTCTGAATTCTCTACTGGGGACTCTGGTGGCTaGGTGTCCTGGACAGGCTTGGGGCAACTTGGTGTCTCTCGTAAG | + |
Preference number: 1 (lower is better) Translates to: VWRSCSEFSTGDSGG*VSWTGLGQLGVSRK Trigger: CTTACGAGAGACACCAAGTTGCCCCAAGCCTGTCCAGGACACCCAGCCACCAGAGTCCCCAGTAGAGAATTCAGAGCAACTCCTCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 90 bp | CTAATGGCAAGGTCCACAGAGCAGGCTGAGAATGGCTCGTCCAACTaGGATACCAGCACACCTGGCTTGCTCATCTCTGGTCCAGAGTGC | + |
Preference number: 1 (lower is better) Translates to: LMARSTEQAENGSSN*DTSTPGLLISGPEC Trigger: GCACTCTGGACCAGAGATGAGCAAGCCAGGTGTGCTGGTATCCCAGTTGGACGAGCCATTCTCAGCCTGCTCTGTGGACCTTGCCATTAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 90 bp | CAGGGCATTGAACTGGCACAATGTTCTTCCTCTTCTTGGGGCTGCTaGGTGGCTAGTGGCTCAGGGCTTCCTAATAGATCAGCACTGGGG | + |
Preference number: 1 (lower is better) Translates to: QGIELAQCSSSSWGC*VASGSGLPNRSALG Trigger: CCCCAGTGCTGATCTATTAGGAAGCCCTGAGCCACTAGCCACCCAGCAGCCCCAAGAAGAGGAAGAACATTGTGCCAGTTCAATGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR GCA 90 bp | TGGTGGAGATACCTCCTTAGGAGCACAGAGCATGAACTCTTACACTaGCACGTGGGCAGGTCAGGAGCAATGGAGGTAACACAGTGCCTC | + |
Preference number: 1 (lower is better) Translates to: WWRYLLRSTEHELLH*HVGRSGAMEVTQCL Trigger: GAGGCACTGTGTTACCTCCATTGCTCCTGACCTGCCCACGTGGCAGTGTAAGAGTTCATGCTCTGTGCTCCTAAGGAGGTATCTCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR GCA 90 bp | GATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTaGCTCTCACACTCTCACCTTAGCTCAGCCAGCCAGGGCAGGAGG | + |
Preference number: 1 (lower is better) Translates to: DEGCSLKDCHYQYAL*LSHSHLSSASQGRR Trigger: CCTCCTGCCCTGGCTGGCTGAGCTAAGGTGAGAGTGTGAGAGGCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR CCA 90 bp | GAGTTCTGCCCACTAGGTATCTCATCATCCAGTATAGGGAGAGAATaGAGACCAGGAGTGGAGAAGCGAGGAGGGGGTAAGGAGGTTGGA | + |
Preference number: 1 (lower is better) Translates to: EFCPLGISSSSIGRE*RPGVEKRGGGKEVG Trigger: TCCAACCTCCTTACCCCCTCCTCGCTTCTCCACTCCTGGTCTCCATTCTCTCCCTATACTGGATGATGAGATACCTAGTGGGCAGAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR CCA 90 bp | GTTTGTCCTCAGGGCAGTACGTGGAAGGGGCTGGAAGGAAACGGTTaGAGACACAGGTCCATAGGTTGCTATGGGAACAGAGGCAACATT | + |
Preference number: 1 (lower is better) Translates to: VCPQGSTWKGLEGNG*RHRSIGCYGNRGNI Trigger: AATGTTGCCTCTGTTCCCATAGCAACCTATGGACCTGTGTCTCCAACCGTTTCCTTCCAGCCCCTTCCACGTACTGCCCTGAGGACAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 90 bp | GCATTGAACTGGCACAATGTTCTTCCTCTTCTTGGGGCTGCTGGGTaGCTAGTGGCTCAGGGCTTCCTAATAGATCAGCACTGGGGCTTT | + |
Preference number: 1 (lower is better) Translates to: ALNWHNVLPLLGAAG*LVAQGFLIDQHWGF Trigger: AAAGCCCCAGTGCTGATCTATTAGGAAGCCCTGAGCCACTAGCCACCCAGCAGCCCCAAGAAGAGGAAGAACATTGTGCCAGTTCAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR TCA 90 bp | TCTGCTAAAGGCCAGGGAAAGGGTGGAACTGATGCAAGCCCAGCCTaGGTTCTGCCCACTAGGTATCTCATCATCCAGTATAGGGAGAGA | + |
Preference number: 1 (lower is better) Translates to: SAKGQGKGGTDASPA*VLPTRYLIIQYRER Trigger: TCTCTCCCTATACTGGATGATGAGATACCTAGTGGGCAGAACTCAGGCTGGGCTTGCATCAGTTCCACCCTTTCCCTGGCCTTTAGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR CCA 90 bp | GCCAAGGCCTTAGACCAGGCTGCCGGTGGAAGGCATAAGATGCTATaGGAGCACTCATCAGTGTACCTACGCTTGTGTTTCAGAAGATCT | + |
Preference number: 1 (lower is better) Translates to: AKALDQAAGGRHKML*EHSSVYLRLCFRRS Trigger: AGATCTTCTGAAACACAAGCGTAGGTACACTGATGAGTGCTCCCATAGCATCTTATGCCTTCCACCGGCAGCCTGGTCTAAGGCCTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR CCA 90 bp | ACAGAATTGGTGAGTGTAGTACTGAAACAGGTGGCAGCTTTGGCCTaGTCACCAGCTCCCTTTGCAAAAGCTGATCCAGTGGACGAGGAG | + |
Preference number: 1 (lower is better) Translates to: TELVSVVLKQVAALA*SPAPFAKADPVDEE Trigger: CTCCTCGTCCACTGGATCAGCTTTTGCAAAGGGAGCTGGTGACCAGGCCAAAGCTGCCACCTGTTTCAGTACTACACTCACCAATTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR TCA 90 bp | ATCTCACAGGTAAGAAAAGTGAGGCACAGAGGTGAGGCCTACACCTaGCCAGGGAGGAGAAAGAAGCATGATGGAGATGAAGGCTGCTCT | + |
Preference number: 1 (lower is better) Translates to: ISQVRKVRHRGEAYT*PGRRKKHDGDEGCS Trigger: AGAGCAGCCTTCATCTCCATCATGCTTCTTTCTCCTCCCTGGTCAGGTGTAGGCCTCACCTCTGTGCCTCACTTTTCTTACCTGTGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR TCA 90 bp | TCTAAAGGACGAATACTCATTCTCCTCTGGACCATGGTTGGGTTCTaGGACCAAGGAGCTGCTAGGGCTAATGGCAAGGTCCACAGAGCA | + |
Preference number: 1 (lower is better) Translates to: SKGRILILLWTMVGF*DQGAARANGKVHRA Trigger: TGCTCTGTGGACCTTGCCATTAGCCCTAGCAGCTCCTTGGTCTCAGAACCCAACCATGGTCCAGAGGAGAATGAGTATTCGTCCTTTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR TCA 90 bp | CGCTGTATTGGTGAGCACAGTAGACGTCATCGCAGCAGTGGACTTTaGACTGAGGGGCAACTTGGAAGACATGGTTTTTACTGGGACCAA | + |
Preference number: 1 (lower is better) Translates to: RCIGEHSRRHRSSGL*TEGQLGRHGFYWDQ Trigger: TTGGTCCCAGTAAAAACCATGTCTTCCAAGTTGCCCCTCAGTTCAAAGTCCACTGCTGCGATGACGTCTACTGTGCTCACCAATACAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 90 bp | GGCTCAGGGCTTCCTAATAGATCAGCACTGGGGCTTTCGTCTACCTaGATTCTAAAGGACGAATACTCATTCTCCTCTGGACCATGGTTG | + |
Preference number: 1 (lower is better) Translates to: GSGLPNRSALGLSST*ILKDEYSFSSGPWL Trigger: CAACCATGGTCCAGAGGAGAATGAGTATTCGTCCTTTAGAATCCAGGTAGACGAAAGCCCCAGTGCTGATCTATTAGGAAGCCCTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR GCA 90 bp | AGGAGAAAGAAGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTaGCATTACCAATATGCACTCTGCCTCTCACACTCTCACCTTAGC | + |
Preference number: 1 (lower is better) Translates to: RRKKHDGDEGCSLKD*HYQYALCLSHSHLS Trigger: GCTAAGGTGAGAGTGTGAGAGGCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCTTCTTTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | GCCTGCTGGTTAGGAGAGGGTATCAAAGAGCCACCAGACATCCTCGCGACGGCCGGTGGCTGGGTGTCCTaGACAGGCTTGGGGCAACTT | + |
Preference number: 2 (lower is better) Translates to: ACWLGEGIKEPPDILATAGGWVS*TGLGQL Trigger: AAGTTGCCCCAAGCCTGTCCAGGACACCCAGCCACC...GGCCGTCGCGAGGATGTCTGGTGGCTCTTTGATACCCTCTCCTAACCAGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CAA 90 bp | GTGGAAGGGGCTGGAAGGAAACGGTTGGAGACACAGGTCCATAGGTaGCTATGGGAACAGAGGCAACATTTGCTGCGTGGGCGCCACCCA | + |
Preference number: 2 (lower is better) Translates to: VEGAGRKRLETQVHR*LWEQRQHLLRGRHP Trigger: TGGGTGGCGCCCACGCAGCAAATGTTGCCTCTGTTCCCATAGCAACCTATGGACCTGTGTCTCCAACCGTTTCCTTCCAGCCCCTTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CAA 90 bp | GTGGTGACTTTGGTTGCTGGACCCTCCGGGGTCTCCTTGGCTTGCTaGCTGTTCCTCTCAGGTGGTATTGTGTTGGCAGGTGCTTTGGCC | + |
Preference number: 2 (lower is better) Translates to: VVTLVAGPSGVSLAC*LFLSGGIVLAGALA Trigger: GGCCAAAGCACCTGCCAACACAATACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGGTCCAGCAACCAAAGTCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR GCA 90 bp | GACTGGCTGTGGAGAGGGCCCAAAGGGGCAGAGCACTCAAAGCTCCCTAGAGACCATGAACTCTTACACTaGCACGTGGGCAGGTCAGGA | + |
Preference number: 2 (lower is better) Translates to: DWLWRGPKGAEHSKLPRDHELLH*HVGRSG Trigger: TCCTGACCTGCCCACGTGGCAGTGTAAGAGTTCATG...GTCTCTAGGGAGCTTTGAGTGCTCTGCCCCTTTGGGCCCTCTCCACAGCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | TATGGGAACAGAGGCAACATTTGCTGCGTGGGCGCCACCCAGTTCTGGTTCTTGTACTGGGGACTCTGGTaGCTGGGTGTCCTGGACAGG | + |
Preference number: 2 (lower is better) Translates to: YGNRGNICCVGATQFWFLYWGLW*LGVLDR Trigger: CCTGTCCAGGACACCCAGCCACCAGAGTCCCCAGTA...CAAGAACCAGAACTGGGTGGCGCCCACGCAGCAAATGTTGCCTCTGTTCCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CAA 90 bp | TTGCCTCCAGTGGTGACTTTGGTTGCTGGACCCTCCGGGGTCTCCTaGGCTTGCTTGCTGTTCCTCTCAGGTGGTATTGTGTTGGCAGGT | + |
Preference number: 2 (lower is better) Translates to: LPPVVTLVAGPSGVS*ACLLFLSGGIVLAG Trigger: ACCTGCCAACACAATACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGGTCCAGCAACCAAAGTCACCACTGGAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | TATGGGAACAGAGGCAACATTTGCTGCGTGGGCGCCACCCAGTTCTGGTTCTTGTGGTCAGGGATGTTGTaGCCTGGCGCAAATGCAGAG | + |
Preference number: 2 (lower is better) Translates to: YGNRGNICCVGATQFWFLWSGML*PGANAE Trigger: CTCTGCATTTGCGCCAGGTCACAACATCCCTGACCA...CAAGAACCAGAACTGGGTGGCGCCCACGCAGCAAATGTTGCCTCTGTTCCCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR GCA 90 bp | GACTGGCTGTGGAGAGGGCCCAAAGGGGCAGAGCACTCAAAGCTCCCTAGAGACATGGAGGTAACACAGTaGCTCCAAAAGCTGAAGACC | + |
Preference number: 2 (lower is better) Translates to: DWLWRGPKGAEHSKLPRDMEVTQ*LQKLKT Trigger: GGTCTTCAGCTTTTGGAGGCACTGTGTTACCTCCAT...GTCTCTAGGGAGCTTTGAGTGCTCTGCCCCTTTGGGCCCTCTCCACAGCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | TCCTCAGGCCTGGCAGTTGCTTCTGGCTTTCTTAAGAGTCCACAGAGAACCTCCACCCTCAGGGTTGACTaGCTGTGGAGAGGGCCCAAA | + |
Preference number: 2 (lower is better) Translates to: SSGLAVASGFLKSPQRTSTLRVD*LWRGPK Trigger: TTTGGGCCCTCTCCACAGCCAGTCAACCCTGAGGGT...GGAGGTTCTCTGTGGACTCTTAAGAAAGCCAGAAGCAACTGCCAGGCCTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | AGGCAACATTTGCTGCGTGGGCGCCACCCAGTTCTGGTTCTTGCTCTTGATGCTAGGGATGTTGTGACCTaGCGCAAATGCAGAGGGTCC | + |
Preference number: 2 (lower is better) Translates to: RQHLLRGRHPVLVLALDARDVVT*RKCRGS Trigger: GGACCCTCTGCATTTGCGCCAGGTCACAACATCCCT...AGCATCAAGAGCAAGAACCAGAACTGGGTGGCGCCCACGCAGCAAATGTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CAA 90 bp | GGTTTGTCCTCAGGGCAGTACGTGGAAGGGGCTGGAAGGAAACGGTaGGAGACACAGGTCCATAGGTTGCTATGGGAACAGAGGCAACAT | + |
Preference number: 2 (lower is better) Translates to: GLSSGQYVEGAGRKR*ETQVHRLLWEQRQH Trigger: ATGTTGCCTCTGTTCCCATAGCAACCTATGGACCTGTGTCTCCAACCGTTTCCTTCCAGCCCCTTCCACGTACTGCCCTGAGGACAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | GATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTGCTCTGCAGTGCCCGGATaGAGACCTCCACCCAGCCAG | + |
Preference number: 2 (lower is better) Translates to: DGDEGCSLKDCHYQYALCSAVPG*RPPPSQ Trigger: CTGGCTGGGTGGAGGTCTTCATCCGGGCACTGCAGA...GCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | CCCACTAGGTATCTCATCATCCAGTATAGGGAGAGAATGGAGACCAGGAGTGGAAGGGTTGACTGGCTGTaGAGAGGGCCCAAAGGGGCA | + |
Preference number: 2 (lower is better) Translates to: PTRYLIIQYRERMETRSGRVDWL*RGPKGA Trigger: TGCCCCTTTGGGCCCTCTCCACAGCCAGTCAACCCT...TCCACTCCTGGTCTCCATTCTCTCCCTATACTGGATGATGAGATACCTAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | CCCACTAGGTATCTCATCATCCAGTATAGGGAGAGAATGGAGACCAGGAGTGGACTCTACTGGGGACTCTaGTGGCTGGGTGTCCTGGAC | + |
Preference number: 2 (lower is better) Translates to: PTRYLIIQYRERMETRSGLYWGL*WLGVLD Trigger: GTCCAGGACACCCAGCCACCAGAGTCCCCAGTAGAG...TCCACTCCTGGTCTCCATTCTCTCCCTATACTGGATGATGAGATACCTAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | CACTGCCACGTGGGCAGGTCAGGAGCAATGGAGGTAACACAGTGCCTCCAAAAGCATGCTTGGCAGAACTaGGCAAGAGAACAGCATACA | + |
Preference number: 2 (lower is better) Translates to: HCHVGRSGAMEVTQCLQKHAWQN*AREQHT Trigger: TGTATGCTGTTCTCTTGCTCAGTTCTGCCAAGCATG...CTTTTGGAGGCACTGTGTTACCTCCATTGCTCCTGACCTGCCCACGTGGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | GATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTGCAGGGTTGACTGGCTGTaGAGAGGGCCCAAAGGGGCA | + |
Preference number: 2 (lower is better) Translates to: DGDEGCSLKDCHYQYALCRVDWL*RGPKGA Trigger: TGCCCCTTTGGGCCCTCTCCACAGCCAGTCAACCCT...GCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATAAATGGAGACCAGGAGTaGAGAAGCGAGGAGGGGGTA | + |
Preference number: 2 (lower is better) Translates to: ALSTVRYLLIFRLGPTGINGDQE*RSEEGV Trigger: TACCCCCTCCTCGCTTCTCCACTCCTGGTCTCCATT...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | GTGGCCCCAAGCCACTTAGCCCAGGGCATTGAACTGGCACAATGTTCTTCCTCTATTAGCATGTATGTGTaGGTGTGGGCGTGGGTCTGT | + |
Preference number: 2 (lower is better) Translates to: VAPSHLAQGIELAQCSSSISMYV*VWAWVC Trigger: ACAGACCCACGCCCACACCCACACATACATGCTAAT...AGAGGAAGAACATTGTGCCAGTTCAATGCCCTGGGCTAAGTGGCTTGGGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | AAGACTAGAGAAGCTAGACATCTGCTAAAGGCCAGGGAAAGGGTGGAACTGATGTCTTCTTGGGGCTGCTaGGTGGCTAGTGGCTCAGGG | + |
Preference number: 2 (lower is better) Translates to: KTREARHLLKARERVELMSSWGC*VASGSG Trigger: CCCTGAGCCACTAGCCACCCAGCAGCCCCAAGAAGA...CATCAGTTCCACCCTTTCCCTGGCCTTTAGCAGATGTCTAGCTTCTCTAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | GGGCAAGAACTTGTACTCACACCCTCTGAGATAAGTACTAGGCAAGTATCTGTAACTCACCCTCAGGGTTaGCTGGCTGTGGAGAGGGCC | + |
Preference number: 2 (lower is better) Translates to: GQELVLTPSEISTRQVSVTHPQG*LAVERA Trigger: GGCCCTCTCCACAGCCAGTCAACCCTGAGGGTGAGT...TACAGATACTTGCCTAGTACTTATCTCAGAGGGTGTGAGTACAAGTTCTTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | CCCACTAGGTATCTCATCATCCAGTATAGGGAGAGAATGGAGACCAGGAGTGGAGATGCAAGCCCAGCCTaGGTTCTGCCCACTAGGTAT | + |
Preference number: 2 (lower is better) Translates to: PTRYLIIQYRERMETRSGDASPA*VLPTRY Trigger: ATACCTAGTGGGCAGAACTCAGGCTGGGCTTGCATC...TCCACTCCTGGTCTCCATTCTCTCCCTATACTGGATGATGAGATACCTAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR GCA 90 bp | CTGAGGGCTGAGAGCCTGCTGGTTAGGAGAGGGTATCAAAGAGCCACCAGACATATGGAGGTAACACAGTaGCTCCAAAAGCTGAAGACC | + |
Preference number: 2 (lower is better) Translates to: LRAESLLVRRGYQRATRHMEVTQ*LQKLKT Trigger: GGTCTTCAGCTTTTGGAGGCACTGTGTTACCTCCAT...ATGTCTGGTGGCTCTTTGATACCCTCTCCTAACCAGCAGGCTCTCAGCCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | GATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTGCACCCTCAGGGTTGACTaGCTGTGGAGAGGGCCCAAA | + |
Preference number: 2 (lower is better) Translates to: DGDEGCSLKDCHYQYALCTLRVD*LWRGPK Trigger: TTTGGGCCCTCTCCACAGCCAGTCAACCCTGAGGGT...GCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | AAGACTAGAGAAGCTAGACATCTGCTAAAGGCCAGGGAAAGGGTGGAACTGATGGCAACATTTGCTGCGTaGGCGCCACCCAGTTCTGGT | + |
Preference number: 2 (lower is better) Translates to: KTREARHLLKARERVELMATFAA*APPSSG Trigger: ACCAGAACTGGGTGGCGCCCACGCAGCAAATGTTGC...CATCAGTTCCACCCTTTCCCTGGCCTTTAGCAGATGTCTAGCTTCTCTAGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR-3UTR CCA 90 bp | AAGACTAGAGAAGCTAGACATCTGCTAAAGGCCAGGGAAAGGGTGGAACTGATGGTGGCAGCTTTGGCCTaGTCACCAGCTCCCTTTGCA | + |
Preference number: 2 (lower is better) Translates to: KTREARHLLKARERVELMVAALA*SPAPFA Trigger: TGCAAAGGGAGCTGGTGACCAGGCCAAAGCTGCCAC...CATCAGTTCCACCCTTTCCCTGGCCTTTAGCAGATGTCTAGCTTCTCTAGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CAA 90 bp | ACCTGGATTCTAAAGGACGAATACTCATTCTCCTCTGGACCATGGTaGGGTTCTGAGACCAAGGAGCTGCTAGGGCTAATGGCAAGGTCC | + |
Preference number: 2 (lower is better) Translates to: TWILKDEYSFSSGPW*GSETKELLGLMARS Trigger: GGACCTTGCCATTAGCCCTAGCAGCTCCTTGGTCTCAGAACCCAACCATGGTCCAGAGGAGAATGAGTATTCGTCCTTTAGAATCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | CTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCTCCTTAGGAGCACATGCTTGGCAGAACTaGGCAAGAGAACAGCATACA | + |
Preference number: 2 (lower is better) Translates to: LQAWANRDKAGGDTSLGAHAWQN*AREQHT Trigger: TGTATGCTGTTCTCTTGCTCAGTTCTGCCAAGCATG...TGCTCCTAAGGAGGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | AGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACGGGAAAGGGTGGAACTaGTGCAAGCCCAGCCTGAGT | + |
Preference number: 2 (lower is better) Translates to: SMMEMKAALSKTAITNMHGKGWN*CKPSLS Trigger: ACTCAGGCTGGGCTTGCATCAGTTCCACCCTTTCCC...GTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | GCAAGTATCTGTATCCTTCAAACTCAGAGGAGCCCAGTAAAAGGAAGAGCTGCCGGCGCCACCCAGTTCTaGTTCTTGCTCTTGATGCTC | + |
Preference number: 2 (lower is better) Translates to: ASICILQTQRSPVKGRAAGATQF*FLLLML Trigger: GAGCATCAAGAGCAAGAACCAGAACTGGGTGGCGCC...GGCAGCTCTTCCTTTTACTGGGCTCCTCTGAGTTTGAAGGATACAGATACTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | GTGGCCCCAAGCCACTTAGCCCAGGGCATTGAACTGGCACAATGTTCTTCCTCTGTCCATAGGTTGCTATaGGAACAGAGGCAACATTTG | + |
Preference number: 2 (lower is better) Translates to: VAPSHLAQGIELAQCSSSVHRLL*EQRQHL Trigger: CAAATGTTGCCTCTGTTCCCATAGCAACCTATGGAC...AGAGGAAGAACATTGTGCCAGTTCAATGCCCTGGGCTAAGTGGCTTGGGGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | GGGCAAGAACTTGTACTCACACCCTCTGAGATAAGTACTAGGCAAGTATCTGTAGGGAAAGGGTGGAACTaGTGCAAGCCCAGCCTGAGT | + |
Preference number: 2 (lower is better) Translates to: GQELVLTPSEISTRQVSVGKGWN*CKPSLS Trigger: ACTCAGGCTGGGCTTGCATCAGTTCCACCCTTTCCC...TACAGATACTTGCCTAGTACTTATCTCAGAGGGTGTGAGTACAAGTTCTTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR GCA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATAATGGAGGTAACACAGTaGCTCCAAAAGCTGAAGACC | + |
Preference number: 2 (lower is better) Translates to: ALSTVRYLLIFRLGPTGIMEVTQ*LQKLKT Trigger: GGTCTTCAGCTTTTGGAGGCACTGTGTTACCTCCAT...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR GCA 90 bp | AATATATTAGCATGTATGTGTGGGTGTGGGCGTGGGTCTGTGGGTATGTGTGTGCATGAACTCTTACACTaGCACGTGGGCAGGTCAGGA | + |
Preference number: 2 (lower is better) Translates to: NILACMCGCGRGSVGMCVHELLH*HVGRSG Trigger: TCCTGACCTGCCCACGTGGCAGTGTAAGAGTTCATG...CACACACATACCCACAGACCCACGCCCACACCCACACATACATGCTAATATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | TTCGTCTACCTGGATTCTAAAGGACGAATACTCATTCTCCTCTGGACCATGGTTAACAGGTGGCAGCTTTaGCCTGGTCACCAGCTCCCT | + |
Preference number: 2 (lower is better) Translates to: FVYLDSKGRILILLWTMVNRWQL*PGHQLP Trigger: AGGGAGCTGGTGACCAGGCCAAAGCTGCCACCTGTT...AACCATGGTCCAGAGGAGAATGAGTATTCGTCCTTTAGAATCCAGGTAGACGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | CACTGCCACGTGGGCAGGTCAGGAGCAATGGAGGTAACACAGTGCCTCCAAAAGCCAGAAGATGACATATaGACCAGGATAAAACAATGT | + |
Preference number: 2 (lower is better) Translates to: HCHVGRSGAMEVTQCLQKPEDDI*TRIKQC Trigger: ACATTGTTTTATCCTGGTTCATATGTCATCTTCTGG...CTTTTGGAGGCACTGTGTTACCTCCATTGCTCCTGACCTGCCCACGTGGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | GAGATGAGGGGCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCCTGAAGACCAGAAGATaGCATATGAACCAGGATAAA | + |
Preference number: 2 (lower is better) Translates to: EMRGIVNSAIPPHLQAWALKTRR*HMNQDK Trigger: TTTATCCTGGTTCATATGTCATCTTCTGGTCTTCAG...GGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGCCCCTCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | ATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCAGTGCCTCCAAAAGCTaGAGACCAGAAGATGACATA | + |
Preference number: 2 (lower is better) Translates to: IPPHLQAWANRDKAGGDTSASKS*RPEDDI Trigger: TATGTCATCTTCTGGTCTTCAGCTTTTGGAGGCACT...GGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR GCA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATATACCAATATGCACTCTaGCTCTCACACTCTCACCTT | + |
Preference number: 2 (lower is better) Translates to: ALSTVRYLLIFRLGPTGIYQYAL*LSHSHL Trigger: AAGGTGAGAGTGTGAGAGGCAGAGTGCATATTGGTA...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | AATATATTAGCATGTATGTGTGGGTGTGGGCGTGGGTCTGTGGGTATGTGTGTGCATGCTTGGCAGAACTaGGCAAGAGAACAGCATACA | + |
Preference number: 2 (lower is better) Translates to: NILACMCGCGRGSVGMCVHAWQN*AREQHT Trigger: TGTATGCTGTTCTCTTGCTCAGTTCTGCCAAGCATG...CACACACATACCCACAGACCCACGCCCACACCCACACATACATGCTAATATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR GCA 90 bp | AATATATTAGCATGTATGTGTGGGTGTGGGCGTGGGTCTGTGGGTATGTGTGTGTTGGTCTGGAGGAGTTaGTCTGAATTCTCTACTGGG | + |
Preference number: 2 (lower is better) Translates to: NILACMCGCGRGSVGMCVLVWRS*SEFSTG Trigger: CCCAGTAGAGAATTCAGAGCAACTCCTCCAGACCAA...CACACACATACCCACAGACCCACGCCCACACCCACACATACATGCTAATATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR CCA 90 bp | CTCTCAAAGACTGCCATTACCAATATGCACTCTGCCTCTCACACTCTCACCTTAATTAGCATGTATGTGTaGGTGTGGGCGTGGGTCTGT | + |
Preference number: 2 (lower is better) Translates to: LSKTAITNMHSASHTLTLISMYV*VWAWVC Trigger: ACAGACCCACGCCCACACCCACACATACATGCTAAT...TAAGGTGAGAGTGTGAGAGGCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | GCAAGTATCTGTATCCTTCAAACTCAGAGGAGCCCAGTAAAAGGAAGAGCTGCCAGTGCCTCCAAAAGCTaGAGACCAGAAGATGACATA | + |
Preference number: 2 (lower is better) Translates to: ASICILQTQRSPVKGRAASASKS*RPEDDI Trigger: TATGTCATCTTCTGGTCTTCAGCTTTTGGAGGCACT...GGCAGCTCTTCCTTTTACTGGGCTCCTCTGAGTTTGAAGGATACAGATACTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | CAGGGAGGAGAAAGAAGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCCCAGAAGATGACATATaGACCAGGATAAAACAATGT | + |
Preference number: 2 (lower is better) Translates to: QGGERSMMEMKAALSKTAPEDDI*TRIKQC Trigger: ACATTGTTTTATCCTGGTTCATATGTCATCTTCTGG...GGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCTTCTTTCTCCTCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | AAGACTAGAGAAGCTAGACATCTGCTAAAGGCCAGGGAAAGGGTGGAACTGATGCTGAAGACCAGAAGATaGCATATGAACCAGGATAAA | + |
Preference number: 2 (lower is better) Translates to: KTREARHLLKARERVELMLKTRR*HMNQDK Trigger: TTTATCCTGGTTCATATGTCATCTTCTGGTCTTCAG...CATCAGTTCCACCCTTTCCCTGGCCTTTAGCAGATGTCTAGCTTCTCTAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR TCA 90 bp | AGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACCTGAAGACCAGAAGATaGCATATGAACCAGGATAAA | + |
Preference number: 2 (lower is better) Translates to: SMMEMKAALSKTAITNMHLKTRR*HMNQDK Trigger: TTTATCCTGGTTCATATGTCATCTTCTGGTCTTCAG...GTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR TCA 72 bp | CCAGCCCAGGCAGCTCACAGATCTGCAGTGCCCGGATaGAGACCTCCACCCAGCCAGGCCGGCGCTGGAGAT | + |
Preference number: 3 (lower is better) Translates to: PAQAAHRSAVPG*RPPPSQAGAGD Trigger: ATCTCCAGCGCCGGCCTGGCTGGGTGGAGGTCTTCATCCGGGCACTGCAGATCTGTGAGCTGCCTGGGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 72 bp | GCCCGGATGAAGACCTCCACCCAGCCAGGCCGGCGCTaGAGATTATTGAAGAGTCCCCAGAGTGTGTCCCGG | + |
Preference number: 3 (lower is better) Translates to: ARMKTSTQPGRR*RLLKSPQSVSR Trigger: CCGGGACACACTCTGGGGACTCTTCAATAATCTCCAGCGCCGGCCTGGCTGGGTGGAGGTCTTCATCCGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR GCA 72 bp | CTAGAGACCAGCCACTCTGTTACTCCCAGGCTCTCCTaGCAAGGCCTTAGACCAGGCTGCCGGTGGAAGGCA | + |
Preference number: 3 (lower is better) Translates to: LETSHSVTPRLS*QGLRPGCRWKA Trigger: TGCCTTCCACCGGCAGCCTGGTCTAAGGCCTTGGCAGGAGAGCCTGGGAGTAACAGAGTGGCTGGTCTCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR GCA 72 bp | ATCCTCGCGACGGCCCCGGAGTTGGTCTGGAGGAGTTaGTCTGAATTCTCTACTGGGGACTCTGGTGGCTGG | + |
Preference number: 3 (lower is better) Translates to: ILATAPELVWRS*SEFSTGDSGGW Trigger: CCAGCCACCAGAGTCCCCAGTAGAGAATTCAGAGCAACTCCTCCAGACCAACTCCGGGGCCGTCGCGAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR GCA 72 bp | TCACTGGGCCAGGCGCCTACTACGGTACAGCATCACTaGCAGGAATACAGCCAAGAGTGCACTGGTGGCCCC | + |
Preference number: 3 (lower is better) Translates to: SLGQAPTTVQHH*QEYSQECTGGP Trigger: GGGGCCACCAGTGCACTCTTGGCTGTATTCCTGGCAGTGATGCTGTACCGTAGTAGGCGCCTGGCCCAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR CAA 90 bp | AAGGAGCTGCTAGGGCTAATGGCAAGGTCCACAGAGCAGGCTGAGAATGGCTCGGACTCACCCTCAGGGTaGACTGGCTGTGGAGAGGGC | + |
Preference number: 3 (lower is better) Translates to: KELLGLMARSTEQAENGSDSPSG*TGCGEG Trigger: GCCCTCTCCACAGCCAGTCAACCCTGAGGGTGAGTC...CGAGCCATTCTCAGCCTGCTCTGTGGACCTTGCCATTAGCCCTAGCAGCTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 72 bp | AGAACCTCCAGACTCACCCTCAGGGTTGACTGGCTGTaGAGAGGGCCCAAAGGGGCAGAGCACTCAAAGCTC | + |
Preference number: 3 (lower is better) Translates to: RTSRLTLRVDWL*RGPKGAEHSKL Trigger: GAGCTTTGAGTGCTCTGCCCCTTTGGGCCCTCTCCACAGCCAGTCAACCCTGAGGGTGAGTCTGGAGGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CAA 90 bp | GTGGCCCCAAGCCACTTAGCCCAGGGCATTGAACTGGCACAATGTTCTTCCTCTCCCTCCGGGGTCTCCTaGGCTTGCTTGCTGTTCCTC | + |
Preference number: 3 (lower is better) Translates to: VAPSHLAQGIELAQCSSSPSGVS*ACLLFL Trigger: GAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGG...AGAGGAAGAACATTGTGCCAGTTCAATGCCCTGGGCTAAGTGGCTTGGGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR CAA 90 bp | AAGGAGCTGCTAGGGCTAATGGCAAGGTCCACAGAGCAGGCTGAGAATGGCTCGGAGGGGGTAAGGAGGTaGGAGAAAAGCTCCCTCCCA | + |
Preference number: 3 (lower is better) Translates to: KELLGLMARSTEQAENGSEGVRR*EKSSLP Trigger: TGGGAGGGAGCTTTTCTCCAACCTCCTTACCCCCTC...CGAGCCATTCTCAGCCTGCTCTGTGGACCTTGCCATTAGCCCTAGCAGCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR GCA 72 bp | TGGTTGCTGGACCCTCCGGGGTCTCCTTGGCTTGCTTaGTGTTCCTCTCAGGTGGTATTGTGTTGGCAGGTG | + |
Preference number: 3 (lower is better) Translates to: WLLDPPGSPWLA*CSSQVVLCWQV Trigger: CACCTGCCAACACAATACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGGTCCAGCAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR GCA 72 bp | ACGGTACAGCATCACTGCCAGGAATACAGCCAAGAGTaGACTGGTGGCCCCAAGCCACTTAGCCCAGGGCAT | + |
Preference number: 3 (lower is better) Translates to: TVQHHCQEYSQE*TGGPKPLSPGH Trigger: ATGCCCTGGGCTAAGTGGCTTGGGGCCACCAGTGCACTCTTGGCTGTATTCCTGGCAGTGATGCTGTACCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 72 bp | AGAGGCAACATTTGCTGCGTGGGCGCCACCCAGTTCTaGTTCTTGCTCTTGATGCTCTCTGGAGGGCTGAGG | + |
Preference number: 3 (lower is better) Translates to: RGNICCVGATQF*FLLLMLSGGLR Trigger: CCTCAGCCCTCCAGAGAGCATCAAGAGCAAGAACCAGAACTGGGTGGCGCCCACGCAGCAAATGTTGCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 72 bp | GACCCCAGACAAGAGGTTTGTCCTCAGGGCAGTACGTaGAAGGGGCTGGAAGGAAACGGTTGGAGACACAGG | + |
Preference number: 3 (lower is better) Translates to: DPRQEVCPQGST*KGLEGNGWRHR Trigger: CCTGTGTCTCCAACCGTTTCCTTCCAGCCCCTTCCACGTACTGCCCTGAGGACAAACCTCTTGTCTGGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 72 bp | TCCAGTCTGGTTGCCTCCAGTGGTGACTTTGGTTGCTaGACCCTCCGGGGTCTCCTTGGCTTGCTTGCTGTT | + |
Preference number: 3 (lower is better) Translates to: SSLVASSGDFGC*TLRGLLGLLAV Trigger: AACAGCAAGCAAGCCAAGGAGACCCCGGAGGGTCCAGCAACCAAAGTCACCACTGGAGGCAACCAGACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR CAA 90 bp | GAGGGTCCAGAAACCGCAGCAGGAAAGTCTGGTAACTGCAGTGGCTCTAGGGAGCGGCGCTGGAGATTATaGAAGAGTCCCCAGAGTGTG | + |
Preference number: 3 (lower is better) Translates to: EGPETAAGKSGNCSGSRERRWRL*KSPQSV Trigger: CACACTCTGGGGACTCTTCAATAATCTCCAGCGCCG...CTCCCTAGAGCCACTGCAGTTACCAGACTTTCCTGCTGCGGTTTCTGGACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR TCA 72 bp | TACTGCTATTTGGTCCAGTCTGGTTGCCTCCAGTGGTaGCTTTGGTTGCTGGACCCTCCGGGGTCTCCTTGG | + |
Preference number: 3 (lower is better) Translates to: YCYLVQSGCLQW*LWLLDPPGSPW Trigger: CCAAGGAGACCCCGGAGGGTCCAGCAACCAAAGTCACCACTGGAGGCAACCAGACTGGACCAAATAGCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR TCA 72 bp | TGCACTGGTGGCCCCAAGCCACTTAGCCCAGGGCATTaGACTGGCACAATGTTCTTCCTCTTCTTGGGGCTG | + |
Preference number: 3 (lower is better) Translates to: CTGGPKPLSPGH*TGTMFFLFLGL Trigger: CAGCCCCAAGAAGAGGAAGAACATTGTGCCAGTTCAATGCCCTGGGCTAAGTGGCTTGGGGCCACCAGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 72 bp | AGTTGCTCTGAATTCTCTACTGGGGACTCTGGTGGCTaGGTGTCCTGGACAGGCTTGGGGCAACTTGGTGTC | + |
Preference number: 3 (lower is better) Translates to: SCSEFSTGDSGG*VSWTGLGQLGV Trigger: GACACCAAGTTGCCCCAAGCCTGTCCAGGACACCCAGCCACCAGAGTCCCCAGTAGAGAATTCAGAGCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 72 bp | CGGGGTCTCCTTGGCTTGCTTGCTGTTCCTCTCAGGTaGTATTGTGTTGGCAGGTGCTTTGGCCACACTAGC | + |
Preference number: 3 (lower is better) Translates to: RGLLGLLAVPLR*YCVGRCFGHTS Trigger: GCTAGTGTGGCCAAAGCACCTGCCAACACAATACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CCA 72 bp | CAGGGCATTGAACTGGCACAATGTTCTTCCTCTTCTTaGGGCTGCTGGGTGGCTAGTGGCTCAGGGCTTCCT | + |
Preference number: 3 (lower is better) Translates to: QGIELAQCSSSS*GCWVASGSGLP Trigger: AGGAAGCCCTGAGCCACTAGCCACCCAGCAGCCCCAAGAAGAGGAAGAACATTGTGCCAGTTCAATGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR TCA 72 bp | CTTGGTGTCTCTCGTAAGCCATGGTCAGGGATGTTGTaGCCTGGCGCAAATGCAGAGGGTCCAGAAACCGCA | + |
Preference number: 3 (lower is better) Translates to: LGVSRKPWSGML*PGANAEGPETA Trigger: TGCGGTTTCTGGACCCTCTGCATTTGCGCCAGGTCACAACATCCCTGACCATGGCTTACGAGAGACACCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR TCA 72 bp | TGCTTGGCAGAACTGAGCAAGAGAACAGCATACAGCTaGGGCTTCACTGGGCCAGGCGCCTACTACGGTACA | + |
Preference number: 3 (lower is better) Translates to: CLAELSKRTAYS*GFTGPGAYYGT Trigger: TGTACCGTAGTAGGCGCCTGGCCCAGTGAAGCCTCAGCTGTATGCTGTTCTCTTGCTCAGTTCTGCCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR GCA 72 bp | CTTGCTGTTCCTCTCAGGTGGTATTGTGTTGGCAGGTaGTTTGGCCACACTAGCAGGCACTCTGGATGGCAC | + |
Preference number: 3 (lower is better) Translates to: LAVPLRWYCVGR*FGHTSRHSGWH Trigger: GTGCCATCCAGAGTGCCTGCTAGTGTGGCCAAAGCACCTGCCAACACAATACCACCTGAGAGGAACAGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR CAA 90 bp | AAGGAGCTGCTAGGGCTAATGGCAAGGTCCACAGAGCAGGCTGAGAATGGCTCGACCCAGTTCTGGTTCTaGCTCTTGATGCTCTCTGGA | + |
Preference number: 3 (lower is better) Translates to: KELLGLMARSTEQAENGSTQFWF*LLMLSG Trigger: TCCAGAGAGCATCAAGAGCAAGAACCAGAACTGGGT...CGAGCCATTCTCAGCCTGCTCTGTGGACCTTGCCATTAGCCCTAGCAGCTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR-3UTR CAA 90 bp | CCAGTGGACGAGGAGGACAAAGAGGTATCAGCAGATAGGGCTGATACTGTGACCGCTGGAAGGAAACGGTaGGAGACACAGGTCCATAGG | + |
Preference number: 3 (lower is better) Translates to: PVDEEDKEVSADRADTVTAGRKR*ETQVHR Trigger: CCTATGGACCTGTGTCTCCAACCGTTTCCTTCCAGC...GGTCACAGTATCAGCCCTATCTGCTGATACCTCTTTGTCCTCCTCGTCCACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR TCA 72 bp | GGCCAGGGAAAGGGTGGAACTGATGCAAGCCCAGCCTaGGTTCTGCCCACTAGGTATCTCATCATCCAGTAT | + |
Preference number: 3 (lower is better) Translates to: GQGKGGTDASPA*VLPTRYLIIQY Trigger: ATACTGGATGATGAGATACCTAGTGGGCAGAACTCAGGCTGGGCTTGCATCAGTTCCACCCTTTCCCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
||
3UTR TCA 72 bp | AGCTTTGGCCTGGTCACCAGCTCCCTTTGCAAAAGCTaGTCCAGTGGACGAGGAGGACAAAGAGGTATCAGC | + |
Preference number: 3 (lower is better) Translates to: SFGLVTSSLCKS*SSGRGGQRGIS Trigger: GCTGATACCTCTTTGTCCTCCTCGTCCACTGGATCAGCTTTTGCAAAGGGAGCTGGTGACCAGGCCAAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR GCA 72 bp | AGAAGATCTGGGCGAGATGAGGGGCATTGTCAACAGTaGGATACCTCCTCATCTTCAGGCTTGGGCCAACAG | + |
Preference number: 3 (lower is better) Translates to: RRSGRDEGHCQQ*DTSSSSGLGQQ Trigger: CTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGCCCCTCATCTCGCCCAGATCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
||
3UTR GCA 72 bp | ACCAGCACACCTGGCTTGCTCATCTCTGGTCCAGAGTaGAAGCTCCTGATACTGCTATTTGGTCCAGTCTGG | + |
Preference number: 3 (lower is better) Translates to: TSTPGLLISGPE*KLLILLFGPVW Trigger: CCAGACTGGACCAAATAGCAGTATCAGGAGCTTGCACTCTGGACCAGAGATGAGCAAGCCAGGTGTGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR CCA 72 bp | GAGTGCAAGCTCCTGATACTGCTATTTGGTCCAGTCTaGTTGCCTCCAGTGGTGACTTTGGTTGCTGGACCC | + |
Preference number: 3 (lower is better) Translates to: ECKLLILLFGPV*LPPVVTLVAGP Trigger: GGGTCCAGCAACCAAAGTCACCACTGGAGGCAACCAGACTGGACCAAATAGCAGTATCAGGAGCTTGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR CCA 72 bp | TGGCACAATGTTCTTCCTCTTCTTGGGGCTGCTGGGTaGCTAGTGGCTCAGGGCTTCCTAATAGATCAGCAC | + |
Preference number: 3 (lower is better) Translates to: WHNVLPLLGAAG*LVAQGFLIDQH Trigger: GTGCTGATCTATTAGGAAGCCCTGAGCCACTAGCCACCCAGCAGCCCCAAGAAGAGGAAGAACATTGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR TCA 72 bp | CGAATACTCATTCTCCTCTGGACCATGGTTGGGTTCTaGGACCAAGGAGCTGCTAGGGCTAATGGCAAGGTC | + |
Preference number: 3 (lower is better) Translates to: RILILLWTMVGF*DQGAARANGKV Trigger: GACCTTGCCATTAGCCCTAGCAGCTCCTTGGTCTCAGAACCCAACCATGGTCCAGAGGAGAATGAGTATTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR GCA 72 bp | TACCTCCTTAGGAGCACAGAGCATGAACTCTTACACTaGCACGTGGGCAGGTCAGGAGCAATGGAGGTAACA | + |
Preference number: 3 (lower is better) Translates to: YLLRSTEHELLH*HVGRSGAMEVT Trigger: TGTTACCTCCATTGCTCCTGACCTGCCCACGTGGCAGTGTAAGAGTTCATGCTCTGTGCTCCTAAGGAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
||
3UTR CCA 72 bp | CCACTAGGTATCTCATCATCCAGTATAGGGAGAGAATaGAGACCAGGAGTGGAGAAGCGAGGAGGGGGTAAG | + |
Preference number: 3 (lower is better) Translates to: PLGISSSSIGRE*RPGVEKRGGGK Trigger: CTTACCCCCTCCTCGCTTCTCCACTCCTGGTCTCCATTCTCTCCCTATACTGGATGATGAGATACCTAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
||
3UTR CCA 72 bp | GTGAGTGTAGTACTGAAACAGGTGGCAGCTTTGGCCTaGTCACCAGCTCCCTTTGCAAAAGCTGATCCAGTG | + |
Preference number: 3 (lower is better) Translates to: VSVVLKQVAALA*SPAPFAKADPV Trigger: CACTGGATCAGCTTTTGCAAAGGGAGCTGGTGACCAGGCCAAAGCTGCCACCTGTTTCAGTACTACACTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR CCA 72 bp | CTCTGGTCCAGAGTGCAAGCTCCTGATACTGCTATTTaGTCCAGTCTGGTTGCCTCCAGTGGTGACTTTGGT | + |
Preference number: 3 (lower is better) Translates to: LWSRVQAPDTAI*SSLVASSGDFG Trigger: ACCAAAGTCACCACTGGAGGCAACCAGACTGGACCAAATAGCAGTATCAGGAGCTTGCACTCTGGACCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR-3UTR CAA 90 bp | CAGGGAGGAGAAAGAAGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCCCTCAGGCCTGGCAGTaGCTTCTGGCTTTCTTAAGA | + |
Preference number: 3 (lower is better) Translates to: QGGERSMMEMKAALSKTAPQAWQ*LLAFLR Trigger: TCTTAAGAAAGCCAGAAGCAACTGCCAGGCCTGAGG...GGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCTTCTTTCTCCTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
||
3UTR-3UTR CAA 90 bp | CCCACTAGGTATCTCATCATCCAGTATAGGGAGAGAATGGAGACCAGGAGTGGACCTCAGGCCTGGCAGTaGCTTCTGGCTTTCTTAAGA | + |
Preference number: 3 (lower is better) Translates to: PTRYLIIQYRERMETRSGPQAWQ*LLAFLR Trigger: TCTTAAGAAAGCCAGAAGCAACTGCCAGGCCTGAGG...TCCACTCCTGGTCTCCATTCTCTCCCTATACTGGATGATGAGATACCTAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
||
3UTR GCA 72 bp | GAAAGGGTGGAACTGATGCAAGCCCAGCCTGAGTTCTaGCCACTAGGTATCTCATCATCCAGTATAGGGAGA | + |
Preference number: 3 (lower is better) Translates to: ERVELMQAQPEF*PLGISSSSIGR Trigger: TCTCCCTATACTGGATGATGAGATACCTAGTGGGCAGAACTCAGGCTGGGCTTGCATCAGTTCCACCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR GCA 72 bp | TGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTaGCTCTCACACTCTCACCTTAGCTCAGCCAGCCAG | + |
Preference number: 3 (lower is better) Translates to: CSLKDCHYQYAL*LSHSHLSSASQ Trigger: CTGGCTGGCTGAGCTAAGGTGAGAGTGTGAGAGGCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
||
3UTR GCA 72 bp | ATTGAACTGGCACAATGTTCTTCCTCTTCTTGGGGCTaGTGGGTGGCTAGTGGCTCAGGGCTTCCTAATAGA | + |
Preference number: 3 (lower is better) Translates to: IELAQCSSSSWG*WVASGSGLPNR Trigger: TCTATTAGGAAGCCCTGAGCCACTAGCCACCCAGCAGCCCCAAGAAGAGGAAGAACATTGTGCCAGTTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR-3UTR CAA 90 bp | AGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACCCCGCATACACTGAGTaGCTGGGTAATTTTGATGGC | + |
Preference number: 3 (lower is better) Translates to: SMMEMKAALSKTAITNMHPAYTE*LGNFDG Trigger: GCCATCAAAATTACCCAGCAACTCAGTGTATGCGGG...GTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
3UTR GCA 72 bp | AAGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTaGCATTACCAATATGCACTCTGCCTCTCACACTCT | + |
Preference number: 3 (lower is better) Translates to: KHDGDEGCSLKD*HYQYALCLSHS Trigger: AGAGTGTGAGAGGCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR TCA 72 bp | GTAACACAGTGCCTCCAAAAGCTGAAGACCAGAAGATaGCATATGAACCAGGATAAAACAATGTCTCTCCCC | + |
Preference number: 3 (lower is better) Translates to: VTQCLQKLKTRR*HMNQDKTMSLP Trigger: GGGGAGAGACATTGTTTTATCCTGGTTCATATGTCATCTTCTGGTCTTCAGCTTTTGGAGGCACTGTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR-3UTR CAA 90 bp | TTCGTCTACCTGGATTCTAAAGGACGAATACTCATTCTCCTCTGGACCATGGTTCTGGTAGTCACAGAATaGGTGAGTGTAGTACTGAAA | + |
Preference number: 3 (lower is better) Translates to: FVYLDSKGRILILLWTMVLVVTE*VSVVLK Trigger: TTTCAGTACTACACTCACCAATTCTGTGACTACCAG...AACCATGGTCCAGAGGAGAATGAGTATTCGTCCTTTAGAATCCAGGTAGACGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR TCA 72 bp | TTAGCATCAATGTATGCATACTTTCCATCTCACAGGTaGGAATATATTAGCATGTATGTGTGGGTGTGGGCG | + |
Preference number: 3 (lower is better) Translates to: LASMYAYFPSHR*EYISMYVWVWA Trigger: CGCCCACACCCACACATACATGCTAATATATTCTCACCTGTGAGATGGAAAGTATGCATACATTGATGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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CDS-3UTR TCA 90 bp | GACTGGCTGTGGAGAGGGCCCAAAGGGGCAGAGCACTCAAAGCTCCCTAGAGACTCTGCAGTGCCCGGATaGAGACCTCCACCCAGCCAG | + |
Preference number: 4 (lower is better) Translates to: DWLWRGPKGAEHSKLPRDSAVPG*RPPPSQ Trigger: CTGGCTGGGTGGAGGTCTTCATCCGGGCACTGCAGA...GTCTCTAGGGAGCTTTGAGTGCTCTGCCCCTTTGGGCCCTCTCCACAGCCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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3UTR CAA 72 bp | TGCTGCGTGGGCGCCACCCAGTTCTGGTTCTTGCTCTaGATGCTCTCTGGAGGGCTGAGGGCTGAGAGCCTG | + |
Preference number: 4 (lower is better) Translates to: CCVGATQFWFLL*MLSGGLRAESL Trigger: CAGGCTCTCAGCCCTCAGCCCTCCAGAGAGCATCAAGAGCAAGAACCAGAACTGGGTGGCGCCCACGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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CDS-3UTR CCA 90 bp | GACTGGCTGTGGAGAGGGCCCAAAGGGGCAGAGCACTCAAAGCTCCCTAGAGACTACTGGGGACTCTGGTaGCTGGGTGTCCTGGACAGG | + |
Preference number: 4 (lower is better) Translates to: DWLWRGPKGAEHSKLPRDYWGLW*LGVLDR Trigger: CCTGTCCAGGACACCCAGCCACCAGAGTCCCCAGTA...GTCTCTAGGGAGCTTTGAGTGCTCTGCCCCTTTGGGCCCTCTCCACAGCCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GGCTCTCCTGCCAAGGCCTTAGACCAGGCTGCCGGTGGAAGGCATAAGATGCTATACTGGGGACTCTGGTaGCTGGGTGTCCTGGACAGG | + |
Preference number: 4 (lower is better) Translates to: GSPAKALDQAAGGRHKMLYWGLW*LGVLDR Trigger: CCTGTCCAGGACACCCAGCCACCAGAGTCCCCAGTA...TAGCATCTTATGCCTTCCACCGGCAGCCTGGTCTAAGGCCTTGGCAGGAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR TCA 90 bp | CTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCTCCTTAGGAGCAGCCAGCACGCTCTCCTaGCTGCCCAGCCCTGTGCTT | + |
Preference number: 4 (lower is better) Translates to: LQAWANRDKAGGDTSLGAASTLS*LPSPVL Trigger: AAGCACAGGGCTGGGCAGTCAGGAGAGCGTGCTGGC...TGCTCCTAAGGAGGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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CDS-3UTR CCA 90 bp | CACTGCCACGTGGGCAGGTCAGGAGCAATGGAGGTAACACAGTGCCTCCAAAAGGGTGGCTGGGTGTCCTaGACAGGCTTGGGGCAACTT | + |
Preference number: 4 (lower is better) Translates to: HCHVGRSGAMEVTQCLQKGGWVS*TGLGQL Trigger: AAGTTGCCCCAAGCCTGTCCAGGACACCCAGCCACC...CTTTTGGAGGCACTGTGTTACCTCCATTGCTCCTGACCTGCCCACGTGGCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GGCTCTCCTGCCAAGGCCTTAGACCAGGCTGCCGGTGGAAGGCATAAGATGCTAAACAGGTGGCAGCTTTaGCCTGGTCACCAGCTCCCT | + |
Preference number: 4 (lower is better) Translates to: GSPAKALDQAAGGRHKMLNRWQL*PGHQLP Trigger: AGGGAGCTGGTGACCAGGCCAAAGCTGCCACCTGTT...TAGCATCTTATGCCTTCCACCGGCAGCCTGGTCTAAGGCCTTGGCAGGAGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GGCTCTCCTGCCAAGGCCTTAGACCAGGCTGCCGGTGGAAGGCATAAGATGCTACCTCCGGGGTCTCCTTaGCTTGCTTGCTGTTCCTCT | + |
Preference number: 4 (lower is better) Translates to: GSPAKALDQAAGGRHKMLPPGSP*LACCSS Trigger: AGAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGG...TAGCATCTTATGCCTTCCACCGGCAGCCTGGTCTAAGGCCTTGGCAGGAGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR TCA 90 bp | GGCTCTCCTGCCAAGGCCTTAGACCAGGCTGCCGGTGGAAGGCATAAGATGCTACGCAGCAGTGGACTTTaGACTGAGGGGCAACTTGGA | + |
Preference number: 4 (lower is better) Translates to: GSPAKALDQAAGGRHKMLRSSGL*TEGQLG Trigger: TCCAAGTTGCCCCTCAGTTCAAAGTCCACTGCTGCG...TAGCATCTTATGCCTTCCACCGGCAGCCTGGTCTAAGGCCTTGGCAGGAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GGCTCTCCTGCCAAGGCCTTAGACCAGGCTGCCGGTGGAAGGCATAAGATGCTAAGGGATGTTGTGACCTaGCGCAAATGCAGAGGGTCC | + |
Preference number: 4 (lower is better) Translates to: GSPAKALDQAAGGRHKMLRDVVT*RKCRGS Trigger: GGACCCTCTGCATTTGCGCCAGGTCACAACATCCCT...TAGCATCTTATGCCTTCCACCGGCAGCCTGGTCTAAGGCCTTGGCAGGAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | TCCTCAGGCCTGGCAGTTGCTTCTGGCTTTCTTAAGAGTCCACAGAGAACCTCCGGGGACTCTGGTGGCTaGGTGTCCTGGACAGGCTTG | + |
Preference number: 4 (lower is better) Translates to: SSGLAVASGFLKSPQRTSGDSGG*VSWTGL Trigger: CAAGCCTGTCCAGGACACCCAGCCACCAGAGTCCCC...GGAGGTTCTCTGTGGACTCTTAAGAAAGCCAGAAGCAACTGCCAGGCCTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GAGATGAGGGGCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCTCTTCTTGGGGCTGCTaGGTGGCTAGTGGCTCAGGG | + |
Preference number: 4 (lower is better) Translates to: EMRGIVNSAIPPHLQAWASSWGC*VASGSG Trigger: CCCTGAGCCACTAGCCACCCAGCAGCCCCAAGAAGA...GGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGCCCCTCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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3UTR CAA 72 bp | CCCCGGAGGCAGGTAGCTCTGATAAACTCGAGTCACTaGATCAGCCAGCCCAGGCAGCTCACAGATCTGCAG | + |
Preference number: 4 (lower is better) Translates to: PRRQVALINSSH*ISQPRQLTDLQ Trigger: CTGCAGATCTGTGAGCTGCCTGGGCTGGCTGATCAAGTGACTCGAGTTTATCAGAGCTACCTGCCTCCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CAA 72 bp | CTATTTGGTCCAGTCTGGTTGCCTCCAGTGGTGACTTaGGTTGCTGGACCCTCCGGGGTCTCCTTGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: LFGPVWLPPVVT*VAGPSGVSLAC Trigger: GCAAGCCAAGGAGACCCCGGAGGGTCCAGCAACCAAAGTCACCACTGGAGGCAACCAGACTGGACCAAATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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CDS-3UTR TCA 90 bp | GAGATGAGGGGCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCGTCCACAGAGCAGGCTaGGAATGGCTCGTCCAACTG | + |
Preference number: 4 (lower is better) Translates to: EMRGIVNSAIPPHLQAWAVHRAG*EWLVQL Trigger: CAGTTGGACGAGCCATTCTCAGCCTGCTCTGTGGAC...GGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGCCCCTCATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | CACTGCCACGTGGGCAGGTCAGGAGCAATGGAGGTAACACAGTGCCTCCAAAAGGGCGCCACCCAGTTCTaGTTCTTGCTCTTGATGCTC | + |
Preference number: 4 (lower is better) Translates to: HCHVGRSGAMEVTQCLQKGATQF*FLLLML Trigger: GAGCATCAAGAGCAAGAACCAGAACTGGGTGGCGCC...CTTTTGGAGGCACTGTGTTACCTCCATTGCTCCTGACCTGCCCACGTGGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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3UTR CAA 72 bp | TTGGTTGCTGGACCCTCCGGGGTCTCCTTGGCTTGCTaGCTGTTCCTCTCAGGTGGTATTGTGTTGGCAGGT | + |
Preference number: 4 (lower is better) Translates to: LVAGPSGVSLAC*LFLSGGIVLAG Trigger: ACCTGCCAACACAATACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGGTCCAGCAACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CAA 72 bp | GACTTTGGTTGCTGGACCCTCCGGGGTCTCCTTGGCTaGCTTGCTGTTCCTCTCAGGTGGTATTGTGTTGGC | + |
Preference number: 4 (lower is better) Translates to: DFGCWTLRGLLG*LAVPLRWYCVG Trigger: GCCAACACAATACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGGTCCAGCAACCAAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CAA 72 bp | GTGGTGACTTTGGTTGCTGGACCCTCCGGGGTCTCCTaGGCTTGCTTGCTGTTCCTCTCAGGTGGTATTGTG | + |
Preference number: 4 (lower is better) Translates to: VVTLVAGPSGVS*ACLLFLSGGIV Trigger: CACAATACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGGTCCAGCAACCAAAGTCACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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CDS-3UTR TCA 90 bp | AGATACCTCCTTAGGAGCACAGAGCATGAACTCTTACACTGCCACGTGGGCAGGGGTTGCCTCCAGTGGTaGCTTTGGTTGCTGGACCCT | + |
Preference number: 4 (lower is better) Translates to: RYLLRSTEHELLHCHVGRGCLQW*LWLLDP Trigger: AGGGTCCAGCAACCAAAGTCACCACTGGAGGCAACC...CCTGCCCACGTGGCAGTGTAAGAGTTCATGCTCTGTGCTCCTAAGGAGGTATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | AGATACCTCCTTAGGAGCACAGAGCATGAACTCTTACACTGCCACGTGGGCAGGCCTCAGGGCAGTACGTaGAAGGGGCTGGAAGGAAAC | + |
Preference number: 4 (lower is better) Translates to: RYLLRSTEHELLHCHVGRPQGST*KGLEGN Trigger: GTTTCCTTCCAGCCCCTTCCACGTACTGCCCTGAGG...CCTGCCCACGTGGCAGTGTAAGAGTTCATGCTCTGTGCTCCTAAGGAGGTATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR CCA 90 bp | CAGGGAGGAGAAAGAAGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCTCTTCTTGGGGCTGCTaGGTGGCTAGTGGCTCAGGG | + |
Preference number: 4 (lower is better) Translates to: QGGERSMMEMKAALSKTASSWGC*VASGSG Trigger: CCCTGAGCCACTAGCCACCCAGCAGCCCCAAGAAGA...GGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCTTCTTTCTCCTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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3UTR CAA 72 bp | CTGTTCCTCTCAGGTGGTATTGTGTTGGCAGGTGCTTaGGCCACACTAGCAGGCACTCTGGATGGCACTGTG | + |
Preference number: 4 (lower is better) Translates to: LFLSGGIVLAGA*ATLAGTLDGTV Trigger: CACAGTGCCATCCAGAGTGCCTGCTAGTGTGGCCAAAGCACCTGCCAACACAATACCACCTGAGAGGAACAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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CDS-3UTR TCA 90 bp | ATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCGTCCACAGAGCAGGCTaGGAATGGCTCGTCCAACTG | + |
Preference number: 4 (lower is better) Translates to: IPPHLQAWANRDKAGGDTVHRAG*EWLVQL Trigger: CAGTTGGACGAGCCATTCTCAGCCTGCTCTGTGGAC...GGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR TCA 90 bp | TCCTCAGGCCTGGCAGTTGCTTCTGGCTTTCTTAAGAGTCCACAGAGAACCTCCACCATGGTTGGGTTCTaGGACCAAGGAGCTGCTAGG | + |
Preference number: 4 (lower is better) Translates to: SSGLAVASGFLKSPQRTSTMVGF*DQGAAR Trigger: CCTAGCAGCTCCTTGGTCTCAGAACCCAACCATGGT...GGAGGTTCTCTGTGGACTCTTAAGAAAGCCAGAAGCAACTGCCAGGCCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR CCA 90 bp | TCCTCAGGCCTGGCAGTTGCTTCTGGCTTTCTTAAGAGTCCACAGAGAACCTCCTGTCCTGGACAGGCTTaGGGCAACTTGGTGTCTCTC | + |
Preference number: 4 (lower is better) Translates to: SSGLAVASGFLKSPQRTSCPGQA*GNLVSL Trigger: GAGAGACACCAAGTTGCCCCAAGCCTGTCCAGGACA...GGAGGTTCTCTGTGGACTCTTAAGAAAGCCAGAAGCAACTGCCAGGCCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR CCA 90 bp | AATATATTAGCATGTATGTGTGGGTGTGGGCGTGGGTCTGTGGGTATGTGTGTGGGGGACTCTGGTGGCTaGGTGTCCTGGACAGGCTTG | + |
Preference number: 4 (lower is better) Translates to: NILACMCGCGRGSVGMCVGDSGG*VSWTGL Trigger: CAAGCCTGTCCAGGACACCCAGCCACCAGAGTCCCC...CACACACATACCCACAGACCCACGCCCACACCCACACATACATGCTAATATATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR CCA 90 bp | CTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCTCCTTAGGAGCAGGCGCCACCCAGTTCTaGTTCTTGCTCTTGATGCTC | + |
Preference number: 4 (lower is better) Translates to: LQAWANRDKAGGDTSLGAGATQF*FLLLML Trigger: GAGCATCAAGAGCAAGAACCAGAACTGGGTGGCGCC...TGCTCCTAAGGAGGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATAGCAACATTTGCTGCGTaGGCGCCACCCAGTTCTGGT | + |
Preference number: 4 (lower is better) Translates to: ALSTVRYLLIFRLGPTGIATFAA*APPSSG Trigger: ACCAGAACTGGGTGGCGCCCACGCAGCAAATGTTGC...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATACCTCAGGGCAGTACGTaGAAGGGGCTGGAAGGAAAC | + |
Preference number: 4 (lower is better) Translates to: ALSTVRYLLIFRLGPTGIPQGST*KGLEGN Trigger: GTTTCCTTCCAGCCCCTTCCACGTACTGCCCTGAGG...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | CTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCTCCTTAGGAGCAGGATACCAGCACACCTaGCTTGCTCATCTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: LQAWANRDKAGGDTSLGAGYQHT*LAHLWS Trigger: GGACCAGAGATGAGCAAGCCAGGTGTGCTGGTATCC...TGCTCCTAAGGAGGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
3UTR CAA 72 bp | GCTGGAAGGAAACGGTTGGAGACACAGGTCCATAGGTaGCTATGGGAACAGAGGCAACATTTGCTGCGTGGG | + |
Preference number: 4 (lower is better) Translates to: AGRKRLETQVHR*LWEQRQHLLRG Trigger: CCCACGCAGCAAATGTTGCCTCTGTTCCCATAGCAACCTATGGACCTGTGTCTCCAACCGTTTCCTTCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CAA 72 bp | TGCAAGCTCCTGATACTGCTATTTGGTCCAGTCTGGTaGCCTCCAGTGGTGACTTTGGTTGCTGGACCCTCC | + |
Preference number: 4 (lower is better) Translates to: CKLLILLFGPVW*PPVVTLVAGPS Trigger: GGAGGGTCCAGCAACCAAAGTCACCACTGGAGGCAACCAGACTGGACCAAATAGCAGTATCAGGAGCTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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3UTR CAA 72 bp | AATGGCTCGTCCAACTGGGATACCAGCACACCTGGCTaGCTCATCTCTGGTCCAGAGTGCAAGCTCCTGATA | + |
Preference number: 4 (lower is better) Translates to: NGSSNWDTSTPG*LISGPECKLLI Trigger: TATCAGGAGCTTGCACTCTGGACCAGAGATGAGCAAGCCAGGTGTGCTGGTATCCCAGTTGGACGAGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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CDS-3UTR TCA 90 bp | AGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTGCAGTGCCCGGATaGAGACCTCCACCCAGCCAG | + |
Preference number: 4 (lower is better) Translates to: SMMEMKAALSKTAITNMHSAVPG*RPPPSQ Trigger: CTGGCTGGGTGGAGGTCTTCATCCGGGCACTGCAGA...GTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR TCA 90 bp | CAGGGAGGAGAAAGAAGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCTGGTCAGGGATGTTGTaGCCTGGCGCAAATGCAGAG | + |
Preference number: 4 (lower is better) Translates to: QGGERSMMEMKAALSKTAWSGML*PGANAE Trigger: CTCTGCATTTGCGCCAGGTCACAACATCCCTGACCA...GGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCTTCTTTCTCCTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | ATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCTGTCCTGGACAGGCTTaGGGCAACTTGGTGTCTCTC | + |
Preference number: 4 (lower is better) Translates to: IPPHLQAWANRDKAGGDTCPGQA*GNLVSL Trigger: GAGAGACACCAAGTTGCCCCAAGCCTGTCCAGGACA...GGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | AATATATTAGCATGTATGTGTGGGTGTGGGCGTGGGTCTGTGGGTATGTGTGTGCTCTACTGGGGACTCTaGTGGCTGGGTGTCCTGGAC | + |
Preference number: 4 (lower is better) Translates to: NILACMCGCGRGSVGMCVLYWGL*WLGVLD Trigger: GTCCAGGACACCCAGCCACCAGAGTCCCCAGTAGAG...CACACACATACCCACAGACCCACGCCCACACCCACACATACATGCTAATATATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GCAAGTATCTGTATCCTTCAAACTCAGAGGAGCCCAGTAAAAGGAAGAGCTGCCCTCTACTGGGGACTCTaGTGGCTGGGTGTCCTGGAC | + |
Preference number: 4 (lower is better) Translates to: ASICILQTQRSPVKGRAALYWGL*WLGVLD Trigger: GTCCAGGACACCCAGCCACCAGAGTCCCCAGTAGAG...GGCAGCTCTTCCTTTTACTGGGCTCCTCTGAGTTTGAAGGATACAGATACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATAGCCCCGGAGTTGGTCTaGAGGAGTTGCTCTGAATTC | + |
Preference number: 4 (lower is better) Translates to: ALSTVRYLLIFRLGPTGIAPELV*RSCSEF Trigger: GAATTCAGAGCAACTCCTCCAGACCAACTCCGGGGC...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | TCTACTAGCCCAAGCCTAGAGAACATGCTTGGCAGAACTGAGCAAGAGAACAGCGTGGCAGCTTTGGCCTaGTCACCAGCTCCCTTTGCA | + |
Preference number: 4 (lower is better) Translates to: STSPSLENMLGRTEQENSVAALA*SPAPFA Trigger: TGCAAAGGGAGCTGGTGACCAGGCCAAAGCTGCCAC...GCTGTTCTCTTGCTCAGTTCTGCCAAGCATGTTCTCTAGGCTTGGGCTAGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | AGATACCTCCTTAGGAGCACAGAGCATGAACTCTTACACTGCCACGTGGGCAGGCAGGTGGTATTGTGTTaGCAGGTGCTTTGGCCACAC | + |
Preference number: 4 (lower is better) Translates to: RYLLRSTEHELLHCHVGRQVVLC*QVLWPH Trigger: GTGTGGCCAAAGCACCTGCCAACACAATACCACCTG...CCTGCCCACGTGGCAGTGTAAGAGTTCATGCTCTGTGCTCCTAAGGAGGTATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | TCCTCAGGCCTGGCAGTTGCTTCTGGCTTTCTTAAGAGTCCACAGAGAACCTCCGCTGTTCCTCTCAGGTaGTATTGTGTTGGCAGGTGC | + |
Preference number: 4 (lower is better) Translates to: SSGLAVASGFLKSPQRTSAVPLR*YCVGRC Trigger: GCACCTGCCAACACAATACCACCTGAGAGGAACAGC...GGAGGTTCTCTGTGGACTCTTAAGAAAGCCAGAAGCAACTGCCAGGCCTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR TCA 90 bp | CCCACTAGGTATCTCATCATCCAGTATAGGGAGAGAATGGAGACCAGGAGTGGATGGTCAGGGATGTTGTaGCCTGGCGCAAATGCAGAG | + |
Preference number: 4 (lower is better) Translates to: PTRYLIIQYRERMETRSGWSGML*PGANAE Trigger: CTCTGCATTTGCGCCAGGTCACAACATCCCTGACCA...TCCACTCCTGGTCTCCATTCTCTCCCTATACTGGATGATGAGATACCTAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR TCA 90 bp | CTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCTCCTTAGGAGCAATAGGGCTGATACTGTaGCCCCAGACAAGAGGTTTG | + |
Preference number: 4 (lower is better) Translates to: LQAWANRDKAGGDTSLGAIGLIL*PQTRGL Trigger: CAAACCTCTTGTCTGGGGTCACAGTATCAGCCCTAT...TGCTCCTAAGGAGGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR TCA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATATCCCTTTGCAAAAGCTaGTCCAGTGGACGAGGAGGA | + |
Preference number: 4 (lower is better) Translates to: ALSTVRYLLIFRLGPTGISLCKS*SSGRGG Trigger: TCCTCCTCGTCCACTGGATCAGCTTTTGCAAAGGGA...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR TCA 90 bp | GATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTGCGGTTGCCTCCAGTGGTaGCTTTGGTTGCTGGACCCT | + |
Preference number: 4 (lower is better) Translates to: DGDEGCSLKDCHYQYALCGCLQW*LWLLDP Trigger: AGGGTCCAGCAACCAAAGTCACCACTGGAGGCAACC...GCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR GCA 90 bp | AGATACCTCCTTAGGAGCACAGAGCATGAACTCTTACACTGCCACGTGGGCAGGTCTCCTTGGCTTGCTTaGTGTTCCTCTCAGGTGGTA | + |
Preference number: 4 (lower is better) Translates to: RYLLRSTEHELLHCHVGRSPWLA*CSSQVV Trigger: TACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGA...CCTGCCCACGTGGCAGTGTAAGAGTTCATGCTCTGTGCTCCTAAGGAGGTATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | CCCACTAGGTATCTCATCATCCAGTATAGGGAGAGAATGGAGACCAGGAGTGGAAGGGATGTTGTGACCTaGCGCAAATGCAGAGGGTCC | + |
Preference number: 4 (lower is better) Translates to: PTRYLIIQYRERMETRSGRDVVT*RKCRGS Trigger: GGACCCTCTGCATTTGCGCCAGGTCACAACATCCCT...TCCACTCCTGGTCTCCATTCTCTCCCTATACTGGATGATGAGATACCTAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | AATATATTAGCATGTATGTGTGGGTGTGGGCGTGGGTCTGTGGGTATGTGTGTGGCAACATTTGCTGCGTaGGCGCCACCCAGTTCTGGT | + |
Preference number: 4 (lower is better) Translates to: NILACMCGCGRGSVGMCVATFAA*APPSSG Trigger: ACCAGAACTGGGTGGCGCCCACGCAGCAAATGTTGC...CACACACATACCCACAGACCCACGCCCACACCCACACATACATGCTAATATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | AATATATTAGCATGTATGTGTGGGTGTGGGCGTGGGTCTGTGGGTATGTGTGTGAACAGGTGGCAGCTTTaGCCTGGTCACCAGCTCCCT | + |
Preference number: 4 (lower is better) Translates to: NILACMCGCGRGSVGMCVNRWQL*PGHQLP Trigger: AGGGAGCTGGTGACCAGGCCAAAGCTGCCACCTGTT...CACACACATACCCACAGACCCACGCCCACACCCACACATACATGCTAATATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATACAGGTGGTATTGTGTTaGCAGGTGCTTTGGCCACAC | + |
Preference number: 4 (lower is better) Translates to: ALSTVRYLLIFRLGPTGIQVVLC*QVLWPH Trigger: GTGTGGCCAAAGCACCTGCCAACACAATACCACCTG...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | CAGGGAGGAGAAAGAAGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCTGTTCTTCCTCTTCTTaGGGCTGCTGGGTGGCTAGT | + |
Preference number: 4 (lower is better) Translates to: QGGERSMMEMKAALSKTACSSSS*GCWVAS Trigger: ACTAGCCACCCAGCAGCCCCAAGAAGAGGAAGAACA...GGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCTTCTTTCTCCTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATATGTTCTTCCTCTTCTTaGGGCTGCTGGGTGGCTAGT | + |
Preference number: 4 (lower is better) Translates to: ALSTVRYLLIFRLGPTGICSSSS*GCWVAS Trigger: ACTAGCCACCCAGCAGCCCCAAGAAGAGGAAGAACA...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GAGATGAGGGGCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCCCCAGGGCATTGAACTaGCACAATGTTCTTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: EMRGIVNSAIPPHLQAWAPRALN*HNVLPL Trigger: AAGAGGAAGAACATTGTGCCAGTTCAATGCCCTGGG...GGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGCCCCTCATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR GCA 90 bp | GCAAGTATCTGTATCCTTCAAACTCAGAGGAGCCCAGTAAAAGGAAGAGCTGCCCTCACAGATCTGCAGTaGCCGGATGAAGACCTCCAC | + |
Preference number: 4 (lower is better) Translates to: ASICILQTQRSPVKGRAALTDLQ*PDEDLH Trigger: GTGGAGGTCTTCATCCGGGCACTGCAGATCTGTGAG...GGCAGCTCTTCCTTTTACTGGGCTCCTCTGAGTTTGAAGGATACAGATACTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR GCA 90 bp | TCCTCAGGCCTGGCAGTTGCTTCTGGCTTTCTTAAGAGTCCACAGAGAACCTCCCCGCATACACTGAGTTaGTGGGTAATTTTGATGGCG | + |
Preference number: 4 (lower is better) Translates to: SSGLAVASGFLKSPQRTSPHTLS*WVILMA Trigger: CGCCATCAAAATTACCCAGCAACTCAGTGTATGCGG...GGAGGTTCTCTGTGGACTCTTAAGAAAGCCAGAAGCAACTGCCAGGCCTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR GCA 90 bp | TCAGCCTCTACTAGCCCAAGCCTAGAGAACATGCTTGGCAGAACTGAGCAAGAGTCTCCTTGGCTTGCTTaGTGTTCCTCTCAGGTGGTA | + |
Preference number: 4 (lower is better) Translates to: SASTSPSLENMLGRTEQESPWLA*CSSQVV Trigger: TACCACCTGAGAGGAACAGCAAGCAAGCCAAGGAGA...CTCTTGCTCAGTTCTGCCAAGCATGTTCTCTAGGCTTGGGCTAGTAGAGGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTGCGCCCCGGAGTTGGTCTaGAGGAGTTGCTCTGAATTC | + |
Preference number: 4 (lower is better) Translates to: DGDEGCSLKDCHYQYALCAPELV*RSCSEF Trigger: GAATTCAGAGCAACTCCTCCAGACCAACTCCGGGGC...GCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | AGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACCCTCCGGGGTCTCCTTaGCTTGCTTGCTGTTCCTCT | + |
Preference number: 4 (lower is better) Translates to: SMMEMKAALSKTAITNMHPPGSP*LACCSS Trigger: AGAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGG...GTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | CCCACTAGGTATCTCATCATCCAGTATAGGGAGAGAATGGAGACCAGGAGTGGATGGCTTGCTCATCTCTaGTCCAGAGTGCAAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: PTRYLIIQYRERMETRSGWLAHL*SRVQAP Trigger: AGGAGCTTGCACTCTGGACCAGAGATGAGCAAGCCA...TCCACTCCTGGTCTCCATTCTCTCCCTATACTGGATGATGAGATACCTAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | CTACGCTTGTGTTTCAGAAGATCTGGGCGAGATGAGGGGCATTGTCAACAGTGCTTCTCCTCTGGACCATaGTTGGGTTCTGAGACCAAG | + |
Preference number: 4 (lower is better) Translates to: LRLCFRRSGRDEGHCQQCFSSGP*LGSETK Trigger: CTTGGTCTCAGAACCCAACCATGGTCCAGAGGAGAA...GCACTGTTGACAATGCCCCTCATCTCGCCCAGATCTTCTGAAACACAAGCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR TCA 90 bp | CTCTCAAAGACTGCCATTACCAATATGCACTCTGCCTCTCACACTCTCACCTTAACCATGGTTGGGTTCTaGGACCAAGGAGCTGCTAGG | + |
Preference number: 4 (lower is better) Translates to: LSKTAITNMHSASHTLTLTMVGF*DQGAAR Trigger: CCTAGCAGCTCCTTGGTCTCAGAACCCAACCATGGT...TAAGGTGAGAGTGTGAGAGGCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR GCA 90 bp | AGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACCTCACAGATCTGCAGTaGCCGGATGAAGACCTCCAC | + |
Preference number: 4 (lower is better) Translates to: SMMEMKAALSKTAITNMHLTDLQ*PDEDLH Trigger: GTGGAGGTCTTCATCCGGGCACTGCAGATCTGTGAG...GTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR GCA 90 bp | TCAGCCTCTACTAGCCCAAGCCTAGAGAACATGCTTGGCAGAACTGAGCAAGAGTTGGTCTGGAGGAGTTaGTCTGAATTCTCTACTGGG | + |
Preference number: 4 (lower is better) Translates to: SASTSPSLENMLGRTEQELVWRS*SEFSTG Trigger: CCCAGTAGAGAATTCAGAGCAACTCCTCCAGACCAA...CTCTTGCTCAGTTCTGCCAAGCATGTTCTCTAGGCTTGGGCTAGTAGAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | TCCTCAGGCCTGGCAGTTGCTTCTGGCTTTCTTAAGAGTCCACAGAGAACCTCCGTCCATAGGTTGCTATaGGAACAGAGGCAACATTTG | + |
Preference number: 4 (lower is better) Translates to: SSGLAVASGFLKSPQRTSVHRLL*EQRQHL Trigger: CAAATGTTGCCTCTGTTCCCATAGCAACCTATGGAC...GGAGGTTCTCTGTGGACTCTTAAGAAAGCCAGAAGCAACTGCCAGGCCTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTGCGCTGTTCCTCTCAGGTaGTATTGTGTTGGCAGGTGC | + |
Preference number: 4 (lower is better) Translates to: DGDEGCSLKDCHYQYALCAVPLR*YCVGRC Trigger: GCACCTGCCAACACAATACCACCTGAGAGGAACAGC...GCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | AGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACGGATACCAGCACACCTaGCTTGCTCATCTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: SMMEMKAALSKTAITNMHGYQHT*LAHLWS Trigger: GGACCAGAGATGAGCAAGCCAGGTGTGCTGGTATCC...GTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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3UTR CAA 72 bp | AAGATGCTATGGGAGCACTCATCAGTGTACCTACGCTaGTGTTTCAGAAGATCTGGGCGAGATGAGGGGCAT | + |
Preference number: 4 (lower is better) Translates to: KMLWEHSSVYLR*CFRRSGRDEGH Trigger: ATGCCCCTCATCTCGCCCAGATCTTCTGAAACACAAGCGTAGGTACACTGATGAGTGCTCCCATAGCATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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3UTR CAA 72 bp | GAATTGGTGAGTGTAGTACTGAAACAGGTGGCAGCTTaGGCCTGGTCACCAGCTCCCTTTGCAAAAGCTGAT | + |
Preference number: 4 (lower is better) Translates to: ELVSVVLKQVAA*AWSPAPFAKAD Trigger: ATCAGCTTTTGCAAAGGGAGCTGGTGACCAGGCCAAAGCTGCCACCTGTTTCAGTACTACACTCACCAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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CDS-3UTR TCA 90 bp | CTCTCAAAGACTGCCATTACCAATATGCACTCTGCCTCTCACACTCTCACCTTATCCCTTTGCAAAAGCTaGTCCAGTGGACGAGGAGGA | + |
Preference number: 4 (lower is better) Translates to: LSKTAITNMHSASHTLTLSLCKS*SSGRGG Trigger: TCCTCCTCGTCCACTGGATCAGCTTTTGCAAAGGGA...TAAGGTGAGAGTGTGAGAGGCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR TCA 90 bp | GGGCAAGAACTTGTACTCACACCCTCTGAGATAAGTACTAGGCAAGTATCTGTACGCAGCAGTGGACTTTaGACTGAGGGGCAACTTGGA | + |
Preference number: 4 (lower is better) Translates to: GQELVLTPSEISTRQVSVRSSGL*TEGQLG Trigger: TCCAAGTTGCCCCTCAGTTCAAAGTCCACTGCTGCG...TACAGATACTTGCCTAGTACTTATCTCAGAGGGTGTGAGTACAAGTTCTTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR GCA 90 bp | GATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTGCACGGTACAGCATCACTaGCAGGAATACAGCCAAGAG | + |
Preference number: 4 (lower is better) Translates to: DGDEGCSLKDCHYQYALCTVQHH*QEYSQE Trigger: CTCTTGGCTGTATTCCTGGCAGTGATGCTGTACCGT...GCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR CCA 90 bp | GCAAGTATCTGTATCCTTCAAACTCAGAGGAGCCCAGTAAAAGGAAGAGCTGCCTTCTCCTCTGGACCATaGTTGGGTTCTGAGACCAAG | + |
Preference number: 4 (lower is better) Translates to: ASICILQTQRSPVKGRAAFSSGP*LGSETK Trigger: CTTGGTCTCAGAACCCAACCATGGTCCAGAGGAGAA...GGCAGCTCTTCCTTTTACTGGGCTCCTCTGAGTTTGAAGGATACAGATACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR CCA 90 bp | TCTACTAGCCCAAGCCTAGAGAACATGCTTGGCAGAACTGAGCAAGAGAACAGCCCCAGGGCATTGAACTaGCACAATGTTCTTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: STSPSLENMLGRTEQENSPRALN*HNVLPL Trigger: AAGAGGAAGAACATTGTGCCAGTTCAATGCCCTGGG...GCTGTTCTCTTGCTCAGTTCTGCCAAGCATGTTCTCTAGGCTTGGGCTAGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
3UTR CAA 72 bp | AATCTGGGAGAAGGCACTGAGCTGGTAGTCACAGAATaGGTGAGTGTAGTACTGAAACAGGTGGCAGCTTTG | + |
Preference number: 4 (lower is better) Translates to: NLGEGTELVVTE*VSVVLKQVAAL Trigger: CAAAGCTGCCACCTGTTTCAGTACTACACTCACCAATTCTGTGACTACCAGCTCAGTGCCTTCTCCCAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
||
CDS-3UTR GCA 90 bp | GATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTGCATCTCTGGTCCAGAGTaGAAGCTCCTGATACTGCTA | + |
Preference number: 4 (lower is better) Translates to: DGDEGCSLKDCHYQYALCISGPE*KLLILL Trigger: TAGCAGTATCAGGAGCTTGCACTCTGGACCAGAGAT...GCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR GCA 90 bp | GGGCAAGAACTTGTACTCACACCCTCTGAGATAAGTACTAGGCAAGTATCTGTAACGGTACAGCATCACTaGCAGGAATACAGCCAAGAG | + |
Preference number: 4 (lower is better) Translates to: GQELVLTPSEISTRQVSVTVQHH*QEYSQE Trigger: CTCTTGGCTGTATTCCTGGCAGTGATGCTGTACCGT...TACAGATACTTGCCTAGTACTTATCTCAGAGGGTGTGAGTACAAGTTCTTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR GCA 90 bp | GGGCAAGAACTTGTACTCACACCCTCTGAGATAAGTACTAGGCAAGTATCTGTAATCTCTGGTCCAGAGTaGAAGCTCCTGATACTGCTA | + |
Preference number: 4 (lower is better) Translates to: GQELVLTPSEISTRQVSVISGPE*KLLILL Trigger: TAGCAGTATCAGGAGCTTGCACTCTGGACCAGAGAT...TACAGATACTTGCCTAGTACTTATCTCAGAGGGTGTGAGTACAAGTTCTTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | AATATATTAGCATGTATGTGTGGGTGTGGGCGTGGGTCTGTGGGTATGTGTGTGGCAACTTGGAAGACATaGTTTTTACTGGGACCAATC | + |
Preference number: 4 (lower is better) Translates to: NILACMCGCGRGSVGMCVATWKT*FLLGPI Trigger: GATTGGTCCCAGTAAAAACCATGTCTTCCAAGTTGC...CACACACATACCCACAGACCCACGCCCACACCCACACATACATGCTAATATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR CCA 90 bp | AAGACTAGAGAAGCTAGACATCTGCTAAAGGCCAGGGAAAGGGTGGAACTGATGGCAACTTGGAAGACATaGTTTTTACTGGGACCAATC | + |
Preference number: 4 (lower is better) Translates to: KTREARHLLKARERVELMATWKT*FLLGPI Trigger: GATTGGTCCCAGTAAAAACCATGTCTTCCAAGTTGC...CATCAGTTCCACCCTTTCCCTGGCCTTTAGCAGATGTCTAGCTTCTCTAGTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CCA 90 bp | GGGCAAGAACTTGTACTCACACCCTCTGAGATAAGTACTAGGCAAGTATCTGTAGTCCATAGGTTGCTATaGGAACAGAGGCAACATTTG | + |
Preference number: 4 (lower is better) Translates to: GQELVLTPSEISTRQVSVVHRLL*EQRQHL Trigger: CAAATGTTGCCTCTGTTCCCATAGCAACCTATGGAC...TACAGATACTTGCCTAGTACTTATCTCAGAGGGTGTGAGTACAAGTTCTTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | GGCTCTCCTGCCAAGGCCTTAGACCAGGCTGCCGGTGGAAGGCATAAGATGCTAAAACAGGTGGCAGCTTaGGCCTGGTCACCAGCTCCC | + |
Preference number: 5 (lower is better) Translates to: GSPAKALDQAAGGRHKMLKQVAA*AWSPAP Trigger: GGGAGCTGGTGACCAGGCCAAAGCTGCCACCTGTTT...TAGCATCTTATGCCTTCCACCGGCAGCCTGGTCTAAGGCCTTGGCAGGAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR CAA 90 bp | GGCTCTCCTGCCAAGGCCTTAGACCAGGCTGCCGGTGGAAGGCATAAGATGCTAGTGTTGGCAGGTGCTTaGGCCACACTAGCAGGCACT | + |
Preference number: 5 (lower is better) Translates to: GSPAKALDQAAGGRHKMLVLAGA*ATLAGT Trigger: AGTGCCTGCTAGTGTGGCCAAAGCACCTGCCAACAC...TAGCATCTTATGCCTTCCACCGGCAGCCTGGTCTAAGGCCTTGGCAGGAGAGCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CACTGCCACGTGGGCAGGTCAGGAGCAATGGAGGTAACACAGTGCCTCCAAAAGGTGTCCTGGACAGGCTaGGGGCAACTTGGTGTCTCT | + |
Preference number: 5 (lower is better) Translates to: HCHVGRSGAMEVTQCLQKVSWTG*GQLGVS Trigger: AGAGACACCAAGTTGCCCCAAGCCTGTCCAGGACAC...CTTTTGGAGGCACTGTGTTACCTCCATTGCTCCTGACCTGCCCACGTGGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
||
CDS-3UTR CAA 90 bp | GAGATGAGGGGCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAAACAGGTGGCAGCTTaGGCCTGGTCACCAGCTCCC | + |
Preference number: 5 (lower is better) Translates to: EMRGIVNSAIPPHLQAWAKQVAA*AWSPAP Trigger: GGGAGCTGGTGACCAGGCCAAAGCTGCCACCTGTTT...GGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGCCCCTCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CACTGCCACGTGGGCAGGTCAGGAGCAATGGAGGTAACACAGTGCCTCCAAAAGGCTGGAAGGAAACGGTaGGAGACACAGGTCCATAGG | + |
Preference number: 5 (lower is better) Translates to: HCHVGRSGAMEVTQCLQKAGRKR*ETQVHR Trigger: CCTATGGACCTGTGTCTCCAACCGTTTCCTTCCAGC...CTTTTGGAGGCACTGTGTTACCTCCATTGCTCCTGACCTGCCCACGTGGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | TCAGCCTCTACTAGCCCAAGCCTAGAGAACATGCTTGGCAGAACTGAGCAAGAGCGGGGTCTCCTTGGCTaGCTTGCTGTTCCTCTCAGG | + |
Preference number: 5 (lower is better) Translates to: SASTSPSLENMLGRTEQERGLLG*LAVPLR Trigger: CCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCG...CTCTTGCTCAGTTCTGCCAAGCATGTTCTCTAGGCTTGGGCTAGTAGAGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | TCAGCCTCTACTAGCCCAAGCCTAGAGAACATGCTTGGCAGAACTGAGCAAGAGGTGTTGGCAGGTGCTTaGGCCACACTAGCAGGCACT | + |
Preference number: 5 (lower is better) Translates to: SASTSPSLENMLGRTEQEVLAGA*ATLAGT Trigger: AGTGCCTGCTAGTGTGGCCAAAGCACCTGCCAACAC...CTCTTGCTCAGTTCTGCCAAGCATGTTCTCTAGGCTTGGGCTAGTAGAGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | AAGACTAGAGAAGCTAGACATCTGCTAAAGGCCAGGGAAAGGGTGGAACTGATGCCCTCCGGGGTCTCCTaGGCTTGCTTGCTGTTCCTC | + |
Preference number: 5 (lower is better) Translates to: KTREARHLLKARERVELMPSGVS*ACLLFL Trigger: GAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGG...CATCAGTTCCACCCTTTCCCTGGCCTTTAGCAGATGTCTAGCTTCTCTAGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | TCAGCCTCTACTAGCCCAAGCCTAGAGAACATGCTTGGCAGAACTGAGCAAGAGACCAGCACACCTGGCTaGCTCATCTCTGGTCCAGAG | + |
Preference number: 5 (lower is better) Translates to: SASTSPSLENMLGRTEQETSTPG*LISGPE Trigger: CTCTGGACCAGAGATGAGCAAGCCAGGTGTGCTGGT...CTCTTGCTCAGTTCTGCCAAGCATGTTCTCTAGGCTTGGGCTAGTAGAGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CAGGGAGGAGAAAGAAGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCCGGCGCTGGAGATTATaGAAGAGTCCCCAGAGTGTG | + |
Preference number: 5 (lower is better) Translates to: QGGERSMMEMKAALSKTARRWRL*KSPQSV Trigger: CACACTCTGGGGACTCTTCAATAATCTCCAGCGCCG...GGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCTTCTTTCTCCTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCTCCTTAGGAGCAATAAACTCGAGTCACTaGATCAGCCAGCCCAGGCAG | + |
Preference number: 5 (lower is better) Translates to: LQAWANRDKAGGDTSLGAINSSH*ISQPRQ Trigger: CTGCCTGGGCTGGCTGATCAAGTGACTCGAGTTTAT...TGCTCCTAAGGAGGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | GACTGGCTGTGGAGAGGGCCCAAAGGGGCAGAGCACTCAAAGCTCCCTAGAGACCTGGTAGTCACAGAATaGGTGAGTGTAGTACTGAAA | + |
Preference number: 5 (lower is better) Translates to: DWLWRGPKGAEHSKLPRDLVVTE*VSVVLK Trigger: TTTCAGTACTACACTCACCAATTCTGTGACTACCAG...GTCTCTAGGGAGCTTTGAGTGCTCTGCCCCTTTGGGCCCTCTCCACAGCCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | AAGACTAGAGAAGCTAGACATCTGCTAAAGGCCAGGGAAAGGGTGGAACTGATGCGGGGTCTCCTTGGCTaGCTTGCTGTTCCTCTCAGG | + |
Preference number: 5 (lower is better) Translates to: KTREARHLLKARERVELMRGLLG*LAVPLR Trigger: CCTGAGAGGAACAGCAAGCAAGCCAAGGAGACCCCG...CATCAGTTCCACCCTTTCCCTGGCCTTTAGCAGATGTCTAGCTTCTCTAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | AGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACCCCTCCGGGGTCTCCTaGGCTTGCTTGCTGTTCCTC | + |
Preference number: 5 (lower is better) Translates to: SMMEMKAALSKTAITNMHPSGVS*ACLLFL Trigger: GAGGAACAGCAAGCAAGCCAAGGAGACCCCGGAGGG...GTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCTCCTTAGGAGCATTTGGTCCAGTCTGGTaGCCTCCAGTGGTGACTTTG | + |
Preference number: 5 (lower is better) Translates to: LQAWANRDKAGGDTSLGAFGPVW*PPVVTL Trigger: CAAAGTCACCACTGGAGGCAACCAGACTGGACCAAA...TGCTCCTAAGGAGGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CTACGCTTGTGTTTCAGAAGATCTGGGCGAGATGAGGGGCATTGTCAACAGTGCTCCTCTGGACCATGGTaGGGTTCTGAGACCAAGGAG | + |
Preference number: 5 (lower is better) Translates to: LRLCFRRSGRDEGHCQQCSSGPW*GSETKE Trigger: CTCCTTGGTCTCAGAACCCAACCATGGTCCAGAGGA...GCACTGTTGACAATGCCCCTCATCTCGCCCAGATCTTCTGAAACACAAGCGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATATCCTCTGGACCATGGTaGGGTTCTGAGACCAAGGAG | + |
Preference number: 5 (lower is better) Translates to: ALSTVRYLLIFRLGPTGISSGPW*GSETKE Trigger: CTCCTTGGTCTCAGAACCCAACCATGGTCCAGAGGA...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATAATAAACTCGAGTCACTaGATCAGCCAGCCCAGGCAG | + |
Preference number: 5 (lower is better) Translates to: ALSTVRYLLIFRLGPTGIINSSH*ISQPRQ Trigger: CTGCCTGGGCTGGCTGATCAAGTGACTCGAGTTTAT...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | GATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTCTGCGTGTCCTGGACAGGCTaGGGGCAACTTGGTGTCTCT | + |
Preference number: 5 (lower is better) Translates to: DGDEGCSLKDCHYQYALCVSWTG*GQLGVS Trigger: AGAGACACCAAGTTGCCCCAAGCCTGTCCAGGACAC...GCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | AATATATTAGCATGTATGTGTGGGTGTGGGCGTGGGTCTGTGGGTATGTGTGTGACCAGCACACCTGGCTaGCTCATCTCTGGTCCAGAG | + |
Preference number: 5 (lower is better) Translates to: NILACMCGCGRGSVGMCVTSTPG*LISGPE Trigger: CTCTGGACCAGAGATGAGCAAGCCAGGTGTGCTGGT...CACACACATACCCACAGACCCACGCCCACACCCACACATACATGCTAATATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | GCAAGTATCTGTATCCTTCAAACTCAGAGGAGCCCAGTAAAAGGAAGAGCTGCCCGGCGCTGGAGATTATaGAAGAGTCCCCAGAGTGTG | + |
Preference number: 5 (lower is better) Translates to: ASICILQTQRSPVKGRAARRWRL*KSPQSV Trigger: CACACTCTGGGGACTCTTCAATAATCTCCAGCGCCG...GGCAGCTCTTCCTTTTACTGGGCTCCTCTGAGTTTGAAGGATACAGATACTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | GCATTGTCAACAGTGCGATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATAACCCAGTTCTGGTTCTaGCTCTTGATGCTCTCTGGA | + |
Preference number: 5 (lower is better) Translates to: ALSTVRYLLIFRLGPTGITQFWF*LLMLSG Trigger: TCCAGAGAGCATCAAGAGCAAGAACCAGAACTGGGT...TATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTATCGCACTGTTGACAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CTACGCTTGTGTTTCAGAAGATCTGGGCGAGATGAGGGGCATTGTCAACAGTGCCCCGCATACACTGAGTaGCTGGGTAATTTTGATGGC | + |
Preference number: 5 (lower is better) Translates to: LRLCFRRSGRDEGHCQQCPAYTE*LGNFDG Trigger: GCCATCAAAATTACCCAGCAACTCAGTGTATGCGGG...GCACTGTTGACAATGCCCCTCATCTCGCCCAGATCTTCTGAAACACAAGCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | TCCTCAGGCCTGGCAGTTGCTTCTGGCTTTCTTAAGAGTCCACAGAGAACCTCCTCAACACAGCAAAACTaGCTGTGGTTGTCTCGGATA | + |
Preference number: 5 (lower is better) Translates to: SSGLAVASGFLKSPQRTSSTQQN*LWLSRI Trigger: TATCCGAGACAACCACAGCAAGTTTTGCTGTGTTGA...GGAGGTTCTCTGTGGACTCTTAAGAAAGCCAGAAGCAACTGCCAGGCCTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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CDS-3UTR CAA 90 bp | TCTACTAGCCCAAGCCTAGAGAACATGCTTGGCAGAACTGAGCAAGAGAACAGCCCCGCATACACTGAGTaGCTGGGTAATTTTGATGGC | + |
Preference number: 5 (lower is better) Translates to: STSPSLENMLGRTEQENSPAYTE*LGNFDG Trigger: GCCATCAAAATTACCCAGCAACTCAGTGTATGCGGG...GCTGTTCTCTTGCTCAGTTCTGCCAAGCATGTTCTCTAGGCTTGGGCTAGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | ATACCTCCTCATCTTCAGGCTTGGGCCAACAGGGATAAAGCTGGTGGAGATACCTCAACACAGCAAAACTaGCTGTGGTTGTCTCGGATA | + |
Preference number: 5 (lower is better) Translates to: IPPHLQAWANRDKAGGDTSTQQN*LWLSRI Trigger: TATCCGAGACAACCACAGCAAGTTTTGCTGTGTTGA...GGTATCTCCACCAGCTTTATCCCTGTTGGCCCAAGCCTGAAGATGAGGAGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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CDS-3UTR CAA 90 bp | AGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCATTACCAATATGCACTTCTGGTTCTTGCTCTaGATGCTCTCTGGAGGGCTG | + |
Preference number: 5 (lower is better) Translates to: SMMEMKAALSKTAITNMHFWFLL*MLSGGL Trigger: CAGCCCTCCAGAGAGCATCAAGAGCAAGAACCAGAA...GTGCATATTGGTAATGGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CTCTCAAAGACTGCCATTACCAATATGCACTCTGCCTCTCACACTCTCACCTTATTCTGGTTCTTGCTCTaGATGCTCTCTGGAGGGCTG | + |
Preference number: 5 (lower is better) Translates to: LSKTAITNMHSASHTLTLFWFLL*MLSGGL Trigger: CAGCCCTCCAGAGAGCATCAAGAGCAAGAACCAGAA...TAAGGTGAGAGTGTGAGAGGCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | GGGCAAGAACTTGTACTCACACCCTCTGAGATAAGTACTAGGCAAGTATCTGTAGCTGGAAGGAAACGGTaGGAGACACAGGTCCATAGG | + |
Preference number: 5 (lower is better) Translates to: GQELVLTPSEISTRQVSVAGRKR*ETQVHR Trigger: CCTATGGACCTGTGTCTCCAACCGTTTCCTTCCAGC...TACAGATACTTGCCTAGTACTTATCTCAGAGGGTGTGAGTACAAGTTCTTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CAGGGAGGAGAAAGAAGCATGATGGAGATGAAGGCTGCTCTCTCAAAGACTGCCGAACTGAGGGGCAACTaGGAAGACATGGTTTTTACT | + |
Preference number: 5 (lower is better) Translates to: QGGERSMMEMKAALSKTAELRGN*EDMVFT Trigger: AGTAAAAACCATGTCTTCCAAGTTGCCCCTCAGTTC...GGCAGTCTTTGAGAGAGCAGCCTTCATCTCCATCATGCTTCTTTCTCCTCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CTACGCTTGTGTTTCAGAAGATCTGGGCGAGATGAGGGGCATTGTCAACAGTGCGAACTGAGGGGCAACTaGGAAGACATGGTTTTTACT | + |
Preference number: 5 (lower is better) Translates to: LRLCFRRSGRDEGHCQQCELRGN*EDMVFT Trigger: AGTAAAAACCATGTCTTCCAAGTTGCCCCTCAGTTC...GCACTGTTGACAATGCCCCTCATCTCGCCCAGATCTTCTGAAACACAAGCGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CTCTCAAAGACTGCCATTACCAATATGCACTCTGCCTCTCACACTCTCACCTTAACCCAGTTCTGGTTCTaGCTCTTGATGCTCTCTGGA | + |
Preference number: 5 (lower is better) Translates to: LSKTAITNMHSASHTLTLTQFWF*LLMLSG Trigger: TCCAGAGAGCATCAAGAGCAAGAACCAGAACTGGGT...TAAGGTGAGAGTGTGAGAGGCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | GGGCAAGAACTTGTACTCACACCCTCTGAGATAAGTACTAGGCAAGTATCTGTATTTGGTCCAGTCTGGTaGCCTCCAGTGGTGACTTTG | + |
Preference number: 5 (lower is better) Translates to: GQELVLTPSEISTRQVSVFGPVW*PPVVTL Trigger: CAAAGTCACCACTGGAGGCAACCAGACTGGACCAAA...TACAGATACTTGCCTAGTACTTATCTCAGAGGGTGTGAGTACAAGTTCTTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS-3UTR CAA 90 bp | CTCTCAAAGACTGCCATTACCAATATGCACTCTGCCTCTCACACTCTCACCTTATCAACACAGCAAAACTaGCTGTGGTTGTCTCGGATA | + |
Preference number: 5 (lower is better) Translates to: LSKTAITNMHSASHTLTLSTQQN*LWLSRI Trigger: TATCCGAGACAACCACAGCAAGTTTTGCTGTGTTGA...TAAGGTGAGAGTGTGAGAGGCAGAGTGCATATTGGTAATGGCAGTCTTTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |
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CDS-3UTR CAA 90 bp | AAGACTAGAGAAGCTAGACATCTGCTAAAGGCCAGGGAAAGGGTGGAACTGATGCTGGTAGTCACAGAATaGGTGAGTGTAGTACTGAAA | + |
Preference number: 5 (lower is better) Translates to: KTREARHLLKARERVELMLVVTE*VSVVLK Trigger: TTTCAGTACTACACTCACCAATTCTGTGACTACCAG...CATCAGTTCCACCCTTTCCCTGGCCTTTAGCAGATGTCTAGCTTCTCTAGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 |
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CDS GCA 72 bp | GGCCGGCCAGCACGCTCTCCTGACTGCCCAGCCCTGTaGTTTAACAGTATCTGGTCACTAGCTGTGAGGCAG | + |
Preference number: 6 (lower is better) Translates to: GRPARSPDCPAL*FNSIWSLAVRQ Trigger: CTGCCTCACAGCTAGTGACCAGATACTGTTAAAGCACAGGGCTGGGCAGTCAGGAGAGCGTGCTGGCCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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CDS GCA 72 bp | AACACAGGGCGAGGCCGGCCAGCACGCTCTCCTGACTaGCCAGCCCTGTGCTTTAACAGTATCTGGTCACTA | + |
Preference number: 6 (lower is better) Translates to: NTGRGRPARSPD*PALCFNSIWSL Trigger: TAGTGACCAGATACTGTTAAAGCACAGGGCTGGGCAGTCAGGAGAGCGTGCTGGCCGGCCTCGCCCTGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130597.8 |
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CDS GCA 72 bp | AAGGCAGGATCTCCAGAACGTCAACACAGCAAAACTTaGTGTGGTTGTCTCGGATATACTTATAGGTCTTGT | + |
Preference number: 6 (lower is better) Translates to: KAGSPERQHSKT*CGCLGYTYRSC Trigger: ACAAGACCTATAAGTATATCCGAGACAACCACAGCAAGTTTTGCTGTGTTGACGTTCTGGAGATCCTGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041362.12 ENSMUST00000110199.3 ENSMUST00000130597.8 |