RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAU2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031858

Ensembl transcript IDs: ENSMUST00000050561.13, ENSMUST00000168013.3, ENSMUST00000212308.2, ENSMUST00000212451.2, ENSMUST00000212845.2

Found 476 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGTCCAAGTTGCGGACACAGGCCTCACAGAAGGCTGGCCAGGCTaGTGTTGGGTCCATTCTGAGCTTGGAACTGCACAGGGGGTGGGC +
Preference number: 1 (lower is better)
Translates to: WVQVADTGLTEGWPG*CWVHSELGTAQGVG
Trigger: GCCCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTGGACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 90 bp CAAGTTGCGGACACAGGCCTCACAGAAGGCTGGCCAGGCTGGTGTTaGGTCCATTCTGAGCTTGGAACTGCACAGGGGGTGGGCCATCTG +
Preference number: 1 (lower is better)
Translates to: QVADTGLTEGWPGWC*VHSELGTAQGVGHL
Trigger: CAGATGGCCCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 90 bp ACTGGTGGGCACCCTGGTGGTTTTGTTCCCAGAGAGCTCCAGTGTTaGGTCCAAGTTGCGGACACAGGCCTCACAGAAGGCTGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: TGGHPGGFVPRELQC*VQVADTGLTEGWPG
Trigger: GCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCTGGGAACAAAACCACCAGGGTGCCCACCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR TCA 90 bp CTCTGGGAGGCTACAGGCCTCGATGTGGTCCTGCAGCAGCTGCTGTaGGAAGTTCTGGTGCATCTGTGCGGCTTCATGGGCATCCATGGC +
Preference number: 1 (lower is better)
Translates to: LWEATGLDVVLQQLL*EVLVHLCGFMGIHG
Trigger: GCCATGGATGCCCATGAAGCCGCACAGATGCACCAGAACTTCTCACAGCAGCTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR TCA 90 bp CACAGGCCTCACAGAAGGCTGGCCAGGCTGGTGTTGGGTCCATTCTaGGCTTGGAACTGCACAGGGGGTGGGCCATCTGTCCACGTAATG +
Preference number: 1 (lower is better)
Translates to: HRPHRRLARLVLGPF*AWNCTGGGPSVHVM
Trigger: CATTACGTGGACAGATGGCCCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTCTGTGAGGCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR GCA 90 bp CCCTGGTGGTTTTGTTCCCAGAGAGCTCCAGTGTTGGGTCCAAGTTaGGGACACAGGCCTCACAGAAGGCTGGCCAGGCTGGTGTTGGGT +
Preference number: 1 (lower is better)
Translates to: PWWFCSQRAPVLGPS*GHRPHRRLARLVLG
Trigger: ACCCAACACCAGCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCTGGGAACAAAACCACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 90 bp AGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGGTTaGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAA +
Preference number: 1 (lower is better)
Translates to: RVGPWDPRARGRQKG*EHLAMGSLCHMAQK
Trigger: TTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR TCA 90 bp GTCCCTGAGTGCAGGGACACTGGAAGAACAGCAGACCGAGGAAAGTaGGAGCCATTACTCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCA +
Preference number: 1 (lower is better)
Translates to: VPECRDTGRTADRGK*EPLLSPQLALGWRP
Trigger: TGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGCTCTCACTTTCCTCGGTCTGCTGTTCTTCCAGTGTCCCTGCACTCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR GCA 90 bp TTGTGCTCTGGGAGGCTACAGGCCTCGATGTGGTCCTGCAGCAGCTaGTGTGAGAAGTTCTGGTGCATCTGTGCGGCTTCATGGGCATCC +
Preference number: 1 (lower is better)
Translates to: LCSGRLQASMWSCSS*CEKFWCICAASWAS
Trigger: GGATGCCCATGAAGCCGCACAGATGCACCAGAACTTCTCACAGCAGCTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 90 bp CTCCAGTGTTGGGTCCAAGTTGCGGACACAGGCCTCACAGAAGGCTaGCCAGGCTGGTGTTGGGTCCATTCTGAGCTTGGAACTGCACAG +
Preference number: 1 (lower is better)
Translates to: LQCWVQVADTGLTEG*PGWCWVHSELGTAQ
Trigger: CTGTGCAGTTCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTGGACCCAACACTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 90 bp GTCCACGTAATGAGGTTGTGCTCTGGGAGGCTACAGGCCTCGATGTaGTCCTGCAGCAGCTGCTGTGAGAAGTTCTGGTGCATCTGTGCG +
Preference number: 1 (lower is better)
Translates to: VHVMRLCSGRLQASM*SCSSCCEKFWCICA
Trigger: CGCACAGATGCACCAGAACTTCTCACAGCAGCTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATTACGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 90 bp CAGGCTGGTGTTGGGTCCATTCTGAGCTTGGAACTGCACAGGGGGTaGGCCATCTGTCCACGTAATGAGGTTGTGCTCTGGGAGGCTACA +
Preference number: 1 (lower is better)
Translates to: QAGVGSILSLELHRG*AICPRNEVVLWEAT
Trigger: TGTAGCCTCCCAGAGCACAACCTCATTACGTGGACAGATGGCCCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACACCAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR GCA 90 bp GTAATGAGGTTGTGCTCTGGGAGGCTACAGGCCTCGATGTGGTCCTaGAGCAGCTGCTGTGAGAAGTTCTGGTGCATCTGTGCGGCTTCA +
Preference number: 1 (lower is better)
Translates to: VMRLCSGRLQASMWS*SSCCEKFWCICAAS
Trigger: TGAAGCCGCACAGATGCACCAGAACTTCTCACAGCAGCTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 90 bp GACAGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATaGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTT +
Preference number: 1 (lower is better)
Translates to: DRRVGSTWPWAVSAT*LRKDVHEGLGASSL
Trigger: AAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CCA 90 bp GCTGTGAGAAGTTCTGGTGCATCTGTGCGGCTTCATGGGCATCCATaGCGTTCCCACATGCCTTGTTTAGGTCTCTCAGGAGGGCAGATG +
Preference number: 1 (lower is better)
Translates to: AVRSSGASVRLHGHP*RSHMPCLGLSGGQM
Trigger: CATCTGCCCTCCTGAGAGACCTAAACAAGGCATGTGGGAACGCCATGGATGCCCATGAAGCCGCACAGATGCACCAGAACTTCTCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 90 bp TGCAGCAGCTGCTGTGAGAAGTTCTGGTGCATCTGTGCGGCTTCATaGGCATCCATGGCGTTCCCACATGCCTTGTTTAGGTCTCTCAGG +
Preference number: 1 (lower is better)
Translates to: CSSCCEKFWCICAAS*ASMAFPHALFRSLR
Trigger: CCTGAGAGACCTAAACAAGGCATGTGGGAACGCCATGGATGCCCATGAAGCCGCACAGATGCACCAGAACTTCTCACAGCAGCTGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR TCA 90 bp TGTCAGACCCCCAGAGCTGGAGTTACAGATGGGCTGTTAGCTGCCTaGCAAGGGTGCTGGGAACTGAACTTGGGCCTCTATAAACTGCTG +
Preference number: 1 (lower is better)
Translates to: CQTPRAGVTDGLLAA*QGCWELNLGLYKLL
Trigger: CAGCAGTTTATAGAGGCCCAAGTTCAGTTCCCAGCACCCTTGTCAGGCAGCTAACAGCCCATCTGTAACTCCAGCTCTGGGGGTCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR GCA 90 bp AGGCCATCAGTCCCTTCAATAGATGGCACTGAGTCCTGGAACAGGTaGAATTGGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACT +
Preference number: 1 (lower is better)
Translates to: RPSVPSIDGTESWNR*NWLSPSEADDGFST
Trigger: AGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCAGGACTCAGTGCCATCTATTGAAGGGACTGATGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CCA 90 bp AAGCCAGCACTATGGCACATGCCCATCATCCCAGGACTAGGGTGGTaGAGGCAGGAGAATCAAGAGCTCAAGGTCATCCATGAACAAGAG +
Preference number: 1 (lower is better)
Translates to: KPALWHMPIIPGLGW*RQENQELKVIHEQE
Trigger: CTCTTGTTCATGGATGACCTTGAGCTCTTGATTCTCCTGCCTCCACCACCCTAGTCCTGGGATGATGGGCATGTGCCATAGTGCTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 90 bp GGTCCTCTGCATTTGACATCTTCAGAGTTTCTCGAAGAAACCGCTTaGCTTCGTTGTAGCGGCCCTGGAAGAAGGAGAAGAGCCCTCGCA +
Preference number: 1 (lower is better)
Translates to: GPLHLTSSEFLEETA*LRCSGPGRRRRALA
Trigger: TGCGAGGGCTCTTCTCCTTCTTCCAGGGCCGCTACAACGAAGCCAAGCGGTTTCTTCGAGAAACTCTGAAGATGTCAAATGCAGAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR TCA 90 bp CAGCACAAGGGAGCAGGCTGTGAGGCGGTTCAGGTCCTCTGCATTTaGCATCTTCAGAGTTTCTCGAAGAAACCGCTTGGCTTCGTTGTA +
Preference number: 1 (lower is better)
Translates to: QHKGAGCEAVQVLCI*HLQSFSKKPLGFVV
Trigger: TACAACGAAGCCAAGCGGTTTCTTCGAGAAACTCTGAAGATGTCAAATGCAGAGGACCTGAACCGCCTCACAGCCTGCTCCCTTGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 90 bp TCAGTCCCTTCAATAGATGGCACTGAGTCCTGGAACAGGTGCAATTaGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACTCTTAGG +
Preference number: 1 (lower is better)
Translates to: SVPSIDGTESWNRCN*LSPSEADDGFSTLR
Trigger: CCTAAGAGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCAGGACTCAGTGCCATCTATTGAAGGGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212845.2
3UTR CCA 90 bp GTAAAGCCAGCACTATGGCACATGCCCATCATCCCAGGACTAGGGTaGTGGAGGCAGGAGAATCAAGAGCTCAAGGTCATCCATGAACAA +
Preference number: 1 (lower is better)
Translates to: VKPALWHMPIIPGLG*WRQENQELKVIHEQ
Trigger: TTGTTCATGGATGACCTTGAGCTCTTGATTCTCCTGCCTCCACCACCCTAGTCCTGGGATGATGGGCATGTGCCATAGTGCTGGCTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR TCA 90 bp GAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCTTCCAAAGCTCTaGGAAGTGGTCTTCACATTGCTTGGTGAGCACCTGCCTAGATAC +
Preference number: 1 (lower is better)
Translates to: EGLGASSLQSWLPKL*EVVFTLLGEHLPRY
Trigger: GTATCTAGGCAGGTGCTCACCAAGCAATGTGAAGACCACTTCTCAGAGCTTTGGAAGCCATGACTGAAGGGACGAAGCTCCAAGACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR TCA 90 bp CAAGGTCCTGTAGCCCAGGCTAGCATGAGGATGACCCTTAACTCCTaGTCTTTACCTCTTCATTGCTGGGATCACAGATACATGCCACCT +
Preference number: 1 (lower is better)
Translates to: QGPVAQASMRMTLNS*SLPLHCWDHRYMPP
Trigger: AGGTGGCATGTATCTGTGATCCCAGCAATGAAGAGGTAAAGATCAGGAGTTAAGGGTCATCCTCATGCTAGCCTGGGCTACAGGACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR GCA 90 bp CCTCCCTTGAGTCTTGAGCACTGGGGTCTTGAATTTAGGAACACCTaGAGTATAGTTCAGTTTGAGAGGTGTGTTTGCTGTGCACAAGAG +
Preference number: 1 (lower is better)
Translates to: PPLSLEHWGLEFRNT*SIVQFERCVCCAQE
Trigger: CTCTTGTGCACAGCAAACACACCTCTCAAACTGAACTATACTGCAGGTGTTCCTAAATTCAAGACCCCAGTGCTCAAGACTCAAGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 90 bp AAGAGCTTGGTTCCACCCCCAACAAAGTACAAAACTACAAACAAGTaGCTGAAGAGATGGCATGGTGGAGTGCTACCTACGGTCTCAGAA +
Preference number: 1 (lower is better)
Translates to: KSLVPPPTKYKTTNK*LKRWHGGVLPTVSE
Trigger: TTCTGAGACCGTAGGTAGCACTCCACCATGCCATCTCTTCAGCCACTTGTTTGTAGTTTTGTACTTTGTTGGGGGTGGAACCAAGCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 90 bp CCCAACAAAGTACAAAACTACAAACAAGTGGCTGAAGAGATGGCATaGTGGAGTGCTACCTACGGTCTCAGAAACTTGGGGTTGAAATGT +
Preference number: 1 (lower is better)
Translates to: PNKVQNYKQVAEEMA*WSATYGLRNLGLKC
Trigger: ACATTTCAACCCCAAGTTTCTGAGACCGTAGGTAGCACTCCACCATGCCATCTCTTCAGCCACTTGTTTGTAGTTTTGTACTTTGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR GCA 90 bp GAATTTAGGAACACCTGCAGTATAGTTCAGTTTGAGAGGTGTGTTTaGTGTGCACAAGAGCTTGGTTCCACCCCCAACAAAGTACAAAAC +
Preference number: 1 (lower is better)
Translates to: EFRNTCSIVQFERCV*CAQELGSTPNKVQN
Trigger: GTTTTGTACTTTGTTGGGGGTGGAACCAAGCTCTTGTGCACAGCAAACACACCTCTCAAACTGAACTATACTGCAGGTGTTCCTAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 90 bp AACAAAGTACAAAACTACAAACAAGTGGCTGAAGAGATGGCATGGTaGAGTGCTACCTACGGTCTCAGAAACTTGGGGTTGAAATGTAAG +
Preference number: 1 (lower is better)
Translates to: NKVQNYKQVAEEMAW*SATYGLRNLGLKCK
Trigger: CTTACATTTCAACCCCAAGTTTCTGAGACCGTAGGTAGCACTCCACCATGCCATCTCTTCAGCCACTTGTTTGTAGTTTTGTACTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CAA 90 bp GACTGGTGGGCACCCTGGTGGTTTTGTTCCCAGAGAGCTCCAGTGTaGGGTCCAAGTTGCGGACACAGGCCTCACAGAAGGCTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: DWWAPWWFCSQRAPV*GPSCGHRPHRRLAR
Trigger: CCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCTGGGAACAAAACCACCAGGGTGCCCACCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp GTAATGAGGTTGTGCTCTGGGAGGCTACAGGCCTCGATGTGGTCCTGCAGCAGCCAAGGGAGCAGGCTGTaGGGCGGTTCAGGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: VMRLCSGRLQASMWSCSSQGSRL*GGSGPL
Trigger: CAGAGGACCTGAACCGCCTCACAGCCTGCTCCCTTG...GCTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CAA 90 bp ACCCTGGTGGTTTTGTTCCCAGAGAGCTCCAGTGTTGGGTCCAAGTaGCGGACACAGGCCTCACAGAAGGCTGGCCAGGCTGGTGTTGGG +
Preference number: 2 (lower is better)
Translates to: TLVVLFPESSSVGSK*RTQASQKAGQAGVG
Trigger: CCCAACACCAGCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCTGGGAACAAAACCACCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CAA 90 bp GCCTCACAGAAGGCTGGCCAGGCTGGTGTTGGGTCCATTCTGAGCTaGGAACTGCACAGGGGGTGGGCCATCTGTCCACGTAATGAGGTT +
Preference number: 2 (lower is better)
Translates to: ASQKAGQAGVGSILS*ELHRGWAICPRNEV
Trigger: AACCTCATTACGTGGACAGATGGCCCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTCTGTGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp CCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGGATGGCACTGAGTCCTaGAACAGGTGCAATTGGCTG +
Preference number: 2 (lower is better)
Translates to: PGTQGLEEDRRVGSTWPWDGTES*NRCNWL
Trigger: CAGCCAATTGCACCTGTTCCAGGACTCAGTGCCATC...CCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp ATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGGACACTGGAGGAGGCAGTGTGAGCTaGCCGGGAAGCTGTGGTCCG +
Preference number: 2 (lower is better)
Translates to: IKSLTSRSSEVPECRDTGGGSVS*PGSCGP
Trigger: CGGACCACAGCTTCCCGGTCAGCTCACACTGCCTCC...TCCAGTGTCCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp GGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTGTCCAATGGGACTTCTaGCTGATGCTTAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GWEHLAMGSLCHMAQKGCVQWDF*LMLRLG
Trigger: GCCCAGCCTAAGCATCAGGCAGAAGTCCCATTGGAC...ACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp TTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGGTTGGGAGGCCATGGGCAGTCTCTaGCACATGGCTCAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: LRVGPWDPRARGRQKGWEAMGSL*HMAQKG
Trigger: TCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGC...CTCCCAACCCTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp ATGCAGGTATTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGACAGAAGACTCCTCCCCTGCACTaGGTCACCTTGGAGGACCAC +
Preference number: 2 (lower is better)
Translates to: MQVLRVGPWDPRARGRQKTPPLH*VTLEDH
Trigger: GTGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGT...CTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAATACCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp AGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGTGCTGGCCAGCTGCATaGCAGGTACCACCATGTTGT +
Preference number: 2 (lower is better)
Translates to: RRVGSTWPWAVSATWLRKCWPAA*QVPPCC
Trigger: ACAACATGGTGGTACCTGCCATGCAGCTGGCCAGCA...CTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CAA 90 bp TTAGCTCTGGACAATGGTGAGGGACTGGTGGGCACCCTGGTGGTTTaGTTCCCAGAGAGCTCCAGTGTTGGGTCCAAGTTGCGGACACAG +
Preference number: 2 (lower is better)
Translates to: LALDNGEGLVGTLVV*FPESSSVGSKLRTQ
Trigger: CTGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCTGGGAACAAAACCACCAGGGTGCCCACCAGTCCCTCACCATTGTCCAGAGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212845.2
3UTR CAA 90 bp TGCATCTGTGCGGCTTCATGGGCATCCATGGCGTTCCCACATGCCTaGTTTAGGTCTCTCAGGAGGGCAGATGACCACAGCTGCACAGAC +
Preference number: 2 (lower is better)
Translates to: CICAASWASMAFPHA*FRSLRRADDHSCTD
Trigger: GTCTGTGCAGCTGTGGTCATCTGCCCTCCTGAGAGACCTAAACAAGGCATGTGGGAACGCCATGGATGCCCATGAAGCCGCACAGATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGCTCTGGACAATGGTaGGGGACTGGTGGGCACCCT +
Preference number: 2 (lower is better)
Translates to: LPHGSERMSMKVLELRPFSSGQW*GTGGHP
Trigger: AGGGTGCCCACCAGTCCCTCACCATTGTCCAGAGCT...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp CCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGACCCAAACTCCTCCCCTaGACTGGGTCACCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: PWAVSATWLRKDVHEGLGPKLLP*TGSPWR
Trigger: CCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGG...TCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CAA 90 bp ATAGGAGGTAACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTaGCTCCAAACCCCACCATCCAGGGTTGGTGAGGTAGGACCAGGC +
Preference number: 2 (lower is better)
Translates to: IGGNNQQSPRTHLPH*LQTPPSRVGEVGPG
Trigger: GCCTGGTCCTACCTCACCAACCCTGGATGGTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTTACCTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR TCA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCAGCTCTGGACAATGGTaGGGGACTGGTGGGCACCCT +
Preference number: 2 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSASSGQW*GTGGHP
Trigger: AGGGTGCCCACCAGTCCCTCACCATTGTCCAGAGCT...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp AGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGTCAGAAGTCCCTGAGTaGAGGGACACTGGAAGAACA +
Preference number: 2 (lower is better)
Translates to: RRVGSTWPWAVSATWLRKSEVPE*RDTGRT
Trigger: TGTTCTTCCAGTGTCCCTGCACTCAGGGACTTCTGA...CTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp GGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTTCAGAAGTCCCTGAGTaGAGGGACACTGGAAGAACA +
Preference number: 2 (lower is better)
Translates to: GWEHLAMGSLCHMAQKGCSEVPE*RDTGRT
Trigger: TGTTCTTCCAGTGTCCCTGCACTCAGGGACTTCTGA...ACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp ACTCAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCCCCAAACTCCTCCCCTaGACTGGGTCACCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: TQMMPLHTLSPCSSQVTPPKLLP*TGSPWR
Trigger: CCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGG...GGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTGAGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp ATGCAGGTATTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGTCCAATGGGACTTCTaGCTGATGCTTAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: MQVLRVGPWDPRARGRQKVQWDF*LMLRLG
Trigger: GCCCAGCCTAAGCATCAGGCAGAAGTCCCATTGGAC...CTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAATACCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp TGGGACTTCTGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCACATGTCTGGGATCTTaGTGGCCAGCTGCATGGCAG +
Preference number: 2 (lower is better)
Translates to: WDFCLMLRLGQDVLLNMSTCLGS*WPAAWQ
Trigger: CTGCCATGCAGCTGGCCAGCAAGATCCCAGACATGT...GCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCAGAAGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp TGGGACTTCTGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCTGGTCCTGCAGCAGCTaGTGTGAGAAGTTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: WDFCLMLRLGQDVLLNMSWSCSS*CEKFWC
Trigger: GCACCAGAACTTCTCACAGCAGCTGCTGCAGGACCA...GCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCAGAAGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp AAGACTGGGGGAATAGTGGTCCTAAAGGGAGAGACCAGCAAACAGACTTCTCACGGGAGCACCTGGCCATaGGCAGTCTCTGCCACATGG +
Preference number: 2 (lower is better)
Translates to: KTGGIVVLKGETSKQTSHGSTWP*AVSATW
Trigger: CCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCC...GTGAGAAGTCTGTTTGCTGGTCTCTCCCTTTAGGACCACTATTCCCCCAGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR TCA 90 bp GGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCGCAGACCGAGGAAAGTaGGAGCCATTACTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: GSERMSMKVLELRPFSHGADRGK*EPLLSP
Trigger: AGGGGAGAGTAATGGCTCTCACTTTCCTCGGTCTGC...GCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp GGGCTGGACCAGGCTCTCCTTTACTGGGTTATTCATATTTCACTGTGTAACCCTCAGGTGCTTGGAGGCTaGGGCGTGGCACCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: GLDQALLYWVIHISLCNPQVLGG*GVAPVS
Trigger: AGACACTGGTGCCACGCCTCAGCCTCCAAGCACCTG...AGGGTTACACAGTGAAATATGAATAACCCAGTAAAGGAGAGCCTGGTCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR GCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTGTCCAATGGGACTTCTaGCTGATGCTTAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELVQWDF*LMLRLG
Trigger: GCCCAGCCTAAGCATCAGGCAGAAGTCCCATTGGAC...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTGCCATGGGCAGTCTCTaGCACATGGCTCAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELAMGSL*HMAQKG
Trigger: TCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGC...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCACGTAATGAGGTTGTaGTCTGGGAGGCTACAGGCC +
Preference number: 2 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELHVMRL*SGRLQA
Trigger: GGCCTGTAGCCTCCCAGAGCACAACCTCATTACGTG...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp TGTGAGAAGTTCTGGTGCATCTGTGCGGCTTCATGGGCATCCATGGCGTTCCCAAGAGAGCTCCAGTGTTaGGTCCAAGTTGCGGACACA +
Preference number: 2 (lower is better)
Translates to: CEKFWCICAASWASMAFPRELQC*VQVADT
Trigger: TGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCT...TGGGAACGCCATGGATGCCCATGAAGCCGCACAGATGCACCAGAACTTCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp AAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCTTCCAAAGACTCCTCCCCTGCACTaGGTCACCTTGGAGGACCAC +
Preference number: 2 (lower is better)
Translates to: KDVHEGLGASSLQSWLPKTPPLH*VTLEDH
Trigger: GTGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGT...CTTTGGAAGCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CAA 90 bp GGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTaGGAGCTTCGTCCCTTCAGTCATGGCTTCCAAAGCTCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: GQSLPHGSERMSMKV*ELRPFSHGFQSSEK
Trigger: CTTCTCAGAGCTTTGGAAGCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp GCTGTGATGCAGGTATTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGATTCAATAGATGGCACTaGGTCCTGGAACAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: AVMQVLRVGPWDPRARGRFNRWH*VLEQVQ
Trigger: TTGCACCTGTTCCAGGACTCAGTGCCATCTATTGAA...TCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAATACCTGCATCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCGCAGACCGAGGAAAGTaGGAGCCATTACTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSAADRGK*EPLLSP
Trigger: AGGGGAGAGTAATGGCTCTCACTTTCCTCGGTCTGC...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp GTATGTGTAGATGCCAGAAGAGGGTTGTCAGACCCCCAGAGCTGGAGTTACAGACAAGCCAAGAGGAGCTaGGCTGGTCCCATAACTGTC +
Preference number: 2 (lower is better)
Translates to: VCVDARRGLSDPQSWSYRQAKRS*AGPITV
Trigger: GACAGTTATGGGACCAGCTCAGCTCCTCTTGGCTTG...TCTGTAACTCCAGCTCTGGGGGTCTGACAACCCTCTTCTGGCATCTACACATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTAGAGAGCTCCAGTGTTaGGTCCAAGTTGCGGACACA +
Preference number: 2 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELRELQC*VQVADT
Trigger: TGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCT...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp TGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGATGGCACTGAGTCCTaGAACAGGTGCAATTGGCTG +
Preference number: 2 (lower is better)
Translates to: WPWAVSATWLRKDVHEGLDGTES*NRCNWL
Trigger: CAGCCAATTGCACCTGTTCCAGGACTCAGTGCCATC...AAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTTCATGGGCATCCATaGCGTTCCCACATGCCTTGT +
Preference number: 2 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELLHGHP*RSHMPC
Trigger: ACAAGGCATGTGGGAACGCCATGGATGCCCATGAAG...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp ACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCAGCAGACCGAGGAAAGTaGGAGCCATTACTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: THIVTLFFSGDTQTQIRPADRGK*EPLLSP
Trigger: AGGGGAGAGTAATGGCTCTCACTTTCCTCGGTCTGC...TGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp AACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTTGCTCCAAACCCCACCACTGGAGGGAGGGAAATaGAAAGACTGGGGGAATAGT +
Preference number: 2 (lower is better)
Translates to: NNQQSPRTHLPHLLQTPPLEGGK*KDWGNS
Trigger: ACTATTCCCCCAGTCTTTTCATTTCCCTCCCTCCAG...TGGTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR GCA 90 bp ACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCAGTCCAATGGGACTTCTaGCTGATGCTTAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: TWLRKDVHEGLGASSLQSVQWDF*LMLRLG
Trigger: GCCCAGCCTAAGCATCAGGCAGAAGTCCCATTGGAC...TGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTTGTGAGAAGTTCTGGTaGATCTGTGCGGCTTCATGG +
Preference number: 2 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELCEKFW*ICAASW
Trigger: CCATGAAGCCGCACAGATGCACCAGAACTTCTCACA...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp AAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCTTCCAAAGCTGCACAGACATGTCTaGGATCTTGCTGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: KDVHEGLGASSLQSWLPKLHRHV*DLAGQL
Trigger: CAGCTGGCCAGCAAGATCCCAGACATGTCTGTGCAG...CTTTGGAAGCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCAATGAGGTTGTGCTCTaGGAGGCTACAGGCCTCGAT +
Preference number: 2 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSANEVVL*EATGLD
Trigger: ATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATT...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp GTAACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTTGCTCCAAACCCCACTTCAATAGATGGCACTaGGTCCTGGAACAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: VTTSKAPGLIYLTCSKPHFNRWH*VLEQVQ
Trigger: TTGCACCTGTTCCAGGACTCAGTGCCATCTATTGAA...GTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR TCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCAGGTCCTCTGCATTTaGCATCTTCAGAGTTTCTCG +
Preference number: 2 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELQVLCI*HLQSFS
Trigger: CGAGAAACTCTGAAGATGTCAAATGCAGAGGACCTG...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR GCA 90 bp ATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGGACACTGGATCAGAAGTCCCTGAGTaGAGGGACACTGGAAGAACA +
Preference number: 2 (lower is better)
Translates to: IKSLTSRSSEVPECRDTGSEVPE*RDTGRT
Trigger: TGTTCTTCCAGTGTCCCTGCACTCAGGGACTTCTGA...TCCAGTGTCCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp CTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCAGAGAGCTCCAGTGTTaGGTCCAAGTTGCGGACACA +
Preference number: 2 (lower is better)
Translates to: LHTLSPCSSQVTPRHRLGRELQC*VQVADT
Trigger: TGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCT...GCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp GGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCCTCATTCAGGTCCAATaGGACTTCTGCCTGATGCTT +
Preference number: 2 (lower is better)
Translates to: GSERMSMKVLELRPFSHGLIQVQ*DFCLML
Trigger: AAGCATCAGGCAGAAGTCCCATTGGACCTGAATGAG...GCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCTGCTGTGAGAAGTTCTaGTGCATCTGTGCGGCTTCA +
Preference number: 2 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSACCEKF*CICAAS
Trigger: TGAAGCCGCACAGATGCACCAGAACTTCTCACAGCA...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CAA 90 bp GTAAATGCTCTAAGTGTTCAGGTATGTGTAGATGCCAGAAGAGGGTaGTCAGACCCCCAGAGCTGGAGTTACAGATGGGCTGTTAGCTGC +
Preference number: 2 (lower is better)
Translates to: VNALSVQVCVDARRG*SDPQSWSYRWAVSC
Trigger: GCAGCTAACAGCCCATCTGTAACTCCAGCTCTGGGGGTCTGACAACCCTCTTCTGGCATCTACACATACCTGAACACTTAGAGCATTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR TCA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCCTCAGATTAAGAGTCTaGCTTCCAGGTCCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSALRLRV*LPGPQK
Trigger: CTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAG...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CCA 90 bp AAGACTGGGGGAATAGTGGTCCTAAAGGGAGAGACCAGCAAACAGACTTCTCACGCAGTCTCTGCCACATaGCTCAGAAAGGATGTCCAT +
Preference number: 2 (lower is better)
Translates to: KTGGIVVLKGETSKQTSHAVSAT*LRKDVH
Trigger: ATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGC...GTGAGAAGTCTGTTTGCTGGTCTCTCCCTTTAGGACCACTATTCCCCCAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CCA 90 bp AAGACTGGGGGAATAGTGGTCCTAAAGGGAGAGACCAGCAAACAGACTTCTCACTGTTGGACACTGTGGTaGGGTCATGTAGGTGGAAAC +
Preference number: 2 (lower is better)
Translates to: KTGGIVVLKGETSKQTSHCWTLW*GHVGGN
Trigger: GTTTCCACCTACATGACCCCACCACAGTGTCCAACA...GTGAGAAGTCTGTTTGCTGGTCTCTCCCTTTAGGACCACTATTCCCCCAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CCA 90 bp GTATGTGTAGATGCCAGAAGAGGGTTGTCAGACCCCCAGAGCTGGAGTTACAGAACTCAACTTTCCAGATaGGACACCTGCTGTCATAGG +
Preference number: 2 (lower is better)
Translates to: VCVDARRGLSDPQSWSYRTQLSR*DTCCHR
Trigger: CCTATGACAGCAGGTGTCCCATCTGGAAAGTTGAGT...TCTGTAACTCCAGCTCTGGGGGTCTGACAACCCTCTTCTGGCATCTACACATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR GCA 90 bp GCAGTGGATGCTCCTCCCTTGAGTCTTGAGCACTGGGGTCTTGAATTTAGGAACTTTGAGAGGTGTGTTTaGTGTGCACAAGAGCTTGGT +
Preference number: 2 (lower is better)
Translates to: AVDAPPLSLEHWGLEFRNFERCV*CAQELG
Trigger: ACCAAGCTCTTGTGCACAGCAAACACACCTCTCAAA...GTTCCTAAATTCAAGACCCCAGTGCTCAAGACTCAAGGGAGGAGCATCCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR TCA 90 bp TTTATATGGATTTCACCTGCAGTCAAGAGTCAACTAACCCATGGAAAAGCAAAGAGCTCTGGACAATGGTaGGGGACTGGTGGGCACCCT +
Preference number: 2 (lower is better)
Translates to: FIWISPAVKSQLTHGKAKSSGQW*GTGGHP
Trigger: AGGGTGCCCACCAGTCCCTCACCATTGTCCAGAGCT...CTTTGCTTTTCCATGGGTTAGTTGACTCTTGACTGCAGGTGAAATCCATATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR TCA 90 bp TCCATGGGAAAGCTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATCTCAGATTAAGAGTCTaGCTTCCAGGTCCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: SMGKLNSCQEGTLSFRSNLRLRV*LPGPQK
Trigger: CTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAG...ATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAGCTTTCCCATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR TCA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGACAAGCCAAGAGGAGCTaGGCTGGTCCCATAACTGTC +
Preference number: 2 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSRQAKRS*AGPITV
Trigger: GACAGTTATGGGACCAGCTCAGCTCCTCTTGGCTTG...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR TCA 90 bp AAGACTGGGGGAATAGTGGTCCTAAAGGGAGAGACCAGCAAACAGACTTCTCACAGCCACCCATGTTTATaGAAACAAACCAACCCTCTC +
Preference number: 2 (lower is better)
Translates to: KTGGIVVLKGETSKQTSHSHPCL*KQTNPL
Trigger: GAGAGGGTTGGTTTGTTTTCATAAACATGGGTGGCT...GTGAGAAGTCTGTTTGCTGGTCTCTCCCTTTAGGACCACTATTCCCCCAGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR GCA 90 bp GGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCGGTCCTTGTTTGAATTaGTGTATGTACAAAATGCCC +
Preference number: 2 (lower is better)
Translates to: GSERMSMKVLELRPFSHGGPCLN*CMYKMP
Trigger: GGGCATTTTGTACATACAGCAATTCAAACAAGGACC...GCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
3UTR-3UTR GCA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGAAATCTAAGAGCCAGGTaGTTGGAGGCTGAGGCGTGG +
Preference number: 2 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSRNLRAR*LEAEAW
Trigger: CCACGCCTCAGCCTCCAAGCACCTGGCTCTTAGATT...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CCA 90 bp TTTATATGGATTTCACCTGCAGTCAAGAGTCAACTAACCCATGGAAAAGCAAAGACTCCTCCCCTGCACTaGGTCACCTTGGAGGACCAC +
Preference number: 2 (lower is better)
Translates to: FIWISPAVKSQLTHGKAKTPPLH*VTLEDH
Trigger: GTGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGT...CTTTGCTTTTCCATGGGTTAGTTGACTCTTGACTGCAGGTGAAATCCATATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CAA 90 bp GAGATGGCATGGTGGAGTGCTACCTACGGTCTCAGAAACTTGGGGTaGAAATGTAAGAATTTCCTATGTAAGCCAGTGGAGATCCAGAAA +
Preference number: 2 (lower is better)
Translates to: EMAWWSATYGLRNLG*KCKNFLCKPVEIQK
Trigger: TTTCTGGATCTCCACTGGCTTACATAGGAAATTCTTACATTTCAACCCCAAGTTTCTGAGACCGTAGGTAGCACTCCACCATGCCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR GCA 90 bp TTTATATGGATTTCACCTGCAGTCAAGAGTCAACTAACCCATGGAAAAGCAAAGAATCTAAGAGCCAGGTaGTTGGAGGCTGAGGCGTGG +
Preference number: 2 (lower is better)
Translates to: FIWISPAVKSQLTHGKAKNLRAR*LEAEAW
Trigger: CCACGCCTCAGCCTCCAAGCACCTGGCTCTTAGATT...CTTTGCTTTTCCATGGGTTAGTTGACTCTTGACTGCAGGTGAAATCCATATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR TCA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGACTCAGATTAAGAGTCTaGCTTCCAGGTCCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSRLRLRV*LPGPQK
Trigger: CTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAG...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR TCA 90 bp GGGCTGGACCAGGCTCTCCTTTACTGGGTTATTCATATTTCACTGTGTAACCCTCGAGAGGTCCTTGTTTaGATTGCTGTATGTACAAAA +
Preference number: 2 (lower is better)
Translates to: GLDQALLYWVIHISLCNPREVLV*IAVCTK
Trigger: TTTTGTACATACAGCAATTCAAACAAGGACCTCTCG...AGGGTTACACAGTGAAATATGAATAACCCAGTAAAGGAGAGCCTGGTCCAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CCA 90 bp TTTATATGGATTTCACCTGCAGTCAAGAGTCAACTAACCCATGGAAAAGCAAAGCAAAGCTCTGAGAAGTaGTCTTCACATTGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: FIWISPAVKSQLTHGKAKQSSEK*SSHCLV
Trigger: CACCAAGCAATGTGAAGACCACTTCTCAGAGCTTTG...CTTTGCTTTTCCATGGGTTAGTTGACTCTTGACTGCAGGTGAAATCCATATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CCA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGAAAAACTACAAACAAGTaGCTGAAGAGATGGCATGGT +
Preference number: 2 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSRKTTNK*LKRWHG
Trigger: ACCATGCCATCTCTTCAGCCACTTGTTTGTAGTTTT...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CAA 90 bp GGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTTACTCTCCCCTCAGCTaGCCCTGGGTTGGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: GWEHLAMGSLCHMAQKGCYSPLS*PWVGGH
Trigger: GTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTA...ACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR TCA 72 bp CACAGAAGGCTGGCCAGGCTGGTGTTGGGTCCATTCTaGGCTTGGAACTGCACAGGGGGTGGGCCATCTGTC +
Preference number: 3 (lower is better)
Translates to: HRRLARLVLGPF*AWNCTGGGPSV
Trigger: GACAGATGGCCCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR GCA 72 bp ACAGGGGGTGGGCCATCTGTCCACGTAATGAGGTTGTaGTCTGGGAGGCTACAGGCCTCGATGTGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: TGGGPSVHVMRL*SGRLQASMWSC
Trigger: GCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATTACGTGGACAGATGGCCCACCCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 72 bp GGGTGGGCCATCTGTCCACGTAATGAGGTTGTGCTCTaGGAGGCTACAGGCCTCGATGTGGTCCTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: GWAICPRNEVVL*EATGLDVVLQQ
Trigger: CTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATTACGTGGACAGATGGCCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp GCTGTGATGCAGGTATTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGATACTCTCCCCTCAGCTaGCCCTGGGTTGGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: AVMQVLRVGPWDPRARGRYSPLS*PWVGGH
Trigger: GTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTA...TCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAATACCTGCATCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp GCCATTACTCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCGACATGTCTGGGATCTaGCTGGCCAGCTGCATGGCA +
Preference number: 3 (lower is better)
Translates to: AITLPSACPGLEATLCSCDMSGI*LASCMA
Trigger: TGCCATGCAGCTGGCCAGCAAGATCCCAGACATGTC...GCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR GCA 72 bp GGGAGGCTACAGGCCTCGATGTGGTCCTGCAGCAGCTaGTGTGAGAAGTTCTGGTGCATCTGTGCGGCTTCA +
Preference number: 3 (lower is better)
Translates to: GRLQASMWSCSS*CEKFWCICAAS
Trigger: TGAAGCCGCACAGATGCACCAGAACTTCTCACAGCAGCTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 72 bp GTTGCGGACACAGGCCTCACAGAAGGCTGGCCAGGCTaGTGTTGGGTCCATTCTGAGCTTGGAACTGCACAG +
Preference number: 3 (lower is better)
Translates to: VADTGLTEGWPG*CWVHSELGTAQ
Trigger: CTGTGCAGTTCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp AGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGCTGTGATGCAGGTATaGAGGGTAGGTCCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: RRVGSTWPWAVSATWLRKAVMQV*RVGPWD
Trigger: GTCCCAGGGACCTACCCTCAATACCTGCATCACAGC...CTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp GCTAGCCCATCTGGGATTTCCCCTCAATCTTTAGCTGTTGGACACTGTGGTGGGTACTCTCCCCTCAGCTaGCCCTGGGTTGGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: ASPSGISPQSLAVGHCGGYSPLS*PWVGGH
Trigger: GTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTA...CCCACCACAGTGTCCAACAGCTAAAGATTGAGGGGAAATCCCAGATGGGCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR GCA 72 bp TTTTGTTCCCAGAGAGCTCCAGTGTTGGGTCCAAGTTaGGGACACAGGCCTCACAGAAGGCTGGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: FCSQRAPVLGPS*GHRPHRRLARL
Trigger: CAGCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCTGGGAACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 72 bp CAAGGGCTAGAGGAAGACAGAAGGGTTGGGAGCACCTaGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAG +
Preference number: 3 (lower is better)
Translates to: QGLEEDRRVGST*PWAVSATWLRK
Trigger: CTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTCTAGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp CCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGATCAGCTTGCCCTGGGTaGGAGGCCACTTTGTGCAGC +
Preference number: 3 (lower is better)
Translates to: PWAVSATWLRKDVHEGLGSACPG*EATLCS
Trigger: GCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGA...TCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR GCA 72 bp GGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTaGCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: GRNPLIQVQWDF*LMLRLGQDVLL
Trigger: CAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR GCA 72 bp TTGTGCTCTGGGAGGCTACAGGCCTCGATGTGGTCCTaGAGCAGCTGCTGTGAGAAGTTCTGGTGCATCTGT +
Preference number: 3 (lower is better)
Translates to: LCSGRLQASMWS*SSCCEKFWCIC
Trigger: ACAGATGCACCAGAACTTCTCACAGCAGCTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 72 bp GTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATaGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCT +
Preference number: 3 (lower is better)
Translates to: VGSTWPWAVSAT*LRKDVHEGLGA
Trigger: AGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CCA 72 bp CTAGAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATaGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTC +
Preference number: 3 (lower is better)
Translates to: LEEDRRVGSTWP*AVSATWLRKDV
Trigger: GACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CCA 72 bp GTTGGGTCCATTCTGAGCTTGGAACTGCACAGGGGGTaGGCCATCTGTCCACGTAATGAGGTTGTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: VGSILSLELHRG*AICPRNEVVLW
Trigger: CCAGAGCACAACCTCATTACGTGGACAGATGGCCCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp TTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGGTTGGGAGATGTCCATGAAGGTCTaGGAGCTTCGTCCCTTCAGT +
Preference number: 3 (lower is better)
Translates to: LRVGPWDPRARGRQKGWEMSMKV*ELRPFS
Trigger: ACTGAAGGGACGAAGCTCCAAGACCTTCATGGACAT...CTCCCAACCCTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR TCA 72 bp CTGGGTCACCTTGGAGGACCACTCAGATTAAGAGTCTaGCTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: LGHLGGPLRLRV*LPGPQKSLSAG
Trigger: CCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAGTGGTCCTCCAAGGTGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CCA 72 bp GAAAGTGAGAGCCATTACTCTCCCCTCAGCTTGCCCTaGGTTGGAGGCCACTTTGTGCAGCTGCACTTAGGT +
Preference number: 3 (lower is better)
Translates to: ESESHYSPLSLP*VGGHFVQLHLG
Trigger: ACCTAAGTGCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGCTCTCACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CCA 72 bp CCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTaGAGGACCACTCAGATTAAGAGTCTGACTTCCAGG +
Preference number: 3 (lower is better)
Translates to: PLPKLLPCTGSP*RTTQIKSLTSR
Trigger: CCTGGAAGTCAGACTCTTAATCTGAGTGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp GCTGTGATGCAGGTATTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGAATGCCCCTACACACATaGTCACCCTGTTCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: AVMQVLRVGPWDPRARGRMPLHT*SPCSSQ
Trigger: CTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCAT...TCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAATACCTGCATCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR TCA 72 bp GGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATaGAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCT +
Preference number: 3 (lower is better)
Translates to: GSLCHMAQKGCP*RSWSFVPSVMA
Trigger: AGCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR TCA 72 bp GGAGCAGGCTGTGAGGCGGTTCAGGTCCTCTGCATTTaGCATCTTCAGAGTTTCTCGAAGAAACCGCTTGGC +
Preference number: 3 (lower is better)
Translates to: GAGCEAVQVLCI*HLQSFSKKPLG
Trigger: GCCAAGCGGTTTCTTCGAGAAACTCTGAAGATGTCAAATGCAGAGGACCTGAACCGCCTCACAGCCTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 72 bp CTATGGCACATGCCCATCATCCCAGGACTAGGGTGGTaGAGGCAGGAGAATCAAGAGCTCAAGGTCATCCAT +
Preference number: 3 (lower is better)
Translates to: LWHMPIIPGLGW*RQENQELKVIH
Trigger: ATGGATGACCTTGAGCTCTTGATTCTCCTGCCTCCACCACCCTAGTCCTGGGATGATGGGCATGTGCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 72 bp GCTGGGATCACAGATACATGCCACCTTGCCTGGCTGTaGGGCGTTTTTGCTATTTGGGATGGTAGACCACTC +
Preference number: 3 (lower is better)
Translates to: AGITDTCHLAWL*GVFAIWDGRPL
Trigger: GAGTGGTCTACCATCCCAAATAGCAAAAACGCCCCACAGCCAGGCAAGGTGGCATGTATCTGTGATCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 72 bp AGTTCTGGTGCATCTGTGCGGCTTCATGGGCATCCATaGCGTTCCCACATGCCTTGTTTAGGTCTCTCAGGA +
Preference number: 3 (lower is better)
Translates to: SSGASVRLHGHP*RSHMPCLGLSG
Trigger: TCCTGAGAGACCTAAACAAGGCATGTGGGAACGCCATGGATGCCCATGAAGCCGCACAGATGCACCAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CCA 72 bp TGCTGTGAGAAGTTCTGGTGCATCTGTGCGGCTTCATaGGCATCCATGGCGTTCCCACATGCCTTGTTTAGG +
Preference number: 3 (lower is better)
Translates to: CCEKFWCICAAS*ASMAFPHALFR
Trigger: CCTAAACAAGGCATGTGGGAACGCCATGGATGCCCATGAAGCCGCACAGATGCACCAGAACTTCTCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp AAGACTGGGGGAATAGTGGTCCTAAAGGGAGAGACCAGCAAACAGACTTCTCACGGCACCCTGGTGGTTTaGTTCCCAGAGAGCTCCAGT +
Preference number: 3 (lower is better)
Translates to: KTGGIVVLKGETSKQTSHGTLVV*FPESSS
Trigger: ACTGGAGCTCTCTGGGAACAAAACCACCAGGGTGCC...GTGAGAAGTCTGTTTGCTGGTCTCTCCCTTTAGGACCACTATTCCCCCAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CAA 90 bp CATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCACCCTGGTGGTTTaGTTCCCAGAGAGCTCCAGT +
Preference number: 3 (lower is better)
Translates to: HGSERMSMKVLELRPFSHGTLVV*FPESSS
Trigger: ACTGGAGCTCTCTGGGAACAAAACCACCAGGGTGCC...ATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212845.2
3UTR TCA 72 bp GGAGCTTCGTCCCTTCAGTCATGGCTTCCAAAGCTCTaGGAAGTGGTCTTCACATTGCTTGGTGAGCACCTG +
Preference number: 3 (lower is better)
Translates to: GASSLQSWLPKL*EVVFTLLGEHL
Trigger: CAGGTGCTCACCAAGCAATGTGAAGACCACTTCTCAGAGCTTTGGAAGCCATGACTGAAGGGACGAAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR GCA 72 bp CCTCTTCATTGCTGGGATCACAGATACATGCCACCTTaGCTGGCTGTGGGGCGTTTTTGCTATTTGGGATGG +
Preference number: 3 (lower is better)
Translates to: PLHCWDHRYMPP*LAVGRFCYLGW
Trigger: CCATCCCAAATAGCAAAAACGCCCCACAGCCAGGCAAGGTGGCATGTATCTGTGATCCCAGCAATGAAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 72 bp GAATCCTTTCGGAAAGGTCAGTGCTTAGGCACACAATaGCATACCGAAGGCAGTGGATGCTCCTCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: ESFRKGQCLGTQ*HTEGSGCSSLE
Trigger: CTCAAGGGAGGAGCATCCACTGCCTTCGGTATGCCATTGTGTGCCTAAGCACTGACCTTTCCGAAAGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CAA 90 bp TCCATGGGAAAGCTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGCACCCTGGTGGTTTaGTTCCCAGAGAGCTCCAGT +
Preference number: 3 (lower is better)
Translates to: SMGKLNSCQEGTLSFRSNGTLVV*FPESSS
Trigger: ACTGGAGCTCTCTGGGAACAAAACCACCAGGGTGCC...ATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAGCTTTCCCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp GCAGTGGATGCTCCTCCCTTGAGTCTTGAGCACTGGGGTCTTGAATTTAGGAACATGTCCATGAAGGTCTaGGAGCTTCGTCCCTTCAGT +
Preference number: 3 (lower is better)
Translates to: AVDAPPLSLEHWGLEFRNMSMKV*ELRPFS
Trigger: ACTGAAGGGACGAAGCTCCAAGACCTTCATGGACAT...GTTCCTAAATTCAAGACCCCAGTGCTCAAGACTCAAGGGAGGAGCATCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR GCA 72 bp CATGGCTTCCAAAGCTCTGAGAAGTGGTCTTCACATTaGTTGGTGAGCACCTGCCTAGATACCATGAGCTGG +
Preference number: 3 (lower is better)
Translates to: HGFQSSEKWSSH*LVSTCLDTMSW
Trigger: CCAGCTCATGGTATCTAGGCAGGTGCTCACCAAGCAATGTGAAGACCACTTCTCAGAGCTTTGGAAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp ACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCAATGCCCCTACACACATaGTCACCCTGTTCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: TWLRKDVHEGLGASSLQSMPLHT*SPCSSQ
Trigger: CTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCAT...TGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp CATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATATGTCCATGAAGGTCTaGGAGCTTCGTCCCTTCAGT +
Preference number: 3 (lower is better)
Translates to: HGSERMSMKVLELRPFSHMSMKV*ELRPFS
Trigger: ACTGAAGGGACGAAGCTCCAAGACCTTCATGGACAT...ATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CCA 72 bp CCAGGAGCACAAGGGCTGGACCAGGCTCTCCTTTACTaGGTTATTCATATTTCACTGTGTAACCCTTACTGG +
Preference number: 3 (lower is better)
Translates to: PGAQGLDQALLY*VIHISLCNPYW
Trigger: CCAGTAAGGGTTACACAGTGAAATATGAATAACCCAGTAAAGGAGAGCCTGGTCCAGCCCTTGTGCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CAA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGAGCTGTGATGCAGGTATaGAGGGTAGGTCCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSRAVMQV*RVGPWD
Trigger: GTCCCAGGGACCTACCCTCAATACCTGCATCACAGC...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CAA 90 bp GTGATTTCCCAACACATAGAAGATGTGACCCAGCAGCACAAGGGAGCAGGCTGTTCAGGTCCTCTGCATTaGACATCTTCAGAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: VISQHIEDVTQQHKGAGCSGPLH*TSSEFL
Trigger: GAGAAACTCTGAAGATGTCAAATGCAGAGGACCTGA...ACAGCCTGCTCCCTTGTGCTGCTGGGTCACATCTTCTATGTGTTGGGAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR TCA 72 bp CACCCCCAACAAAGTACAAAACTACAAACAAGTGGCTaGAGAGATGGCATGGTGGAGTGCTACCTACGGTCT +
Preference number: 3 (lower is better)
Translates to: HPQQSTKLQTSG*RDGMVECYLRS
Trigger: AGACCGTAGGTAGCACTCCACCATGCCATCTCTTCAGCCACTTGTTTGTAGTTTTGTACTTTGTTGGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 72 bp CAAAACTACAAACAAGTGGCTGAAGAGATGGCATGGTaGAGTGCTACCTACGGTCTCAGAAACTTGGGGTTG +
Preference number: 3 (lower is better)
Translates to: QNYKQVAEEMAW*SATYGLRNLGL
Trigger: CAACCCCAAGTTTCTGAGACCGTAGGTAGCACTCCACCATGCCATCTCTTCAGCCACTTGTTTGTAGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 72 bp GTTCCACCCCCAACAAAGTACAAAACTACAAACAAGTaGCTGAAGAGATGGCATGGTGGAGTGCTACCTACG +
Preference number: 3 (lower is better)
Translates to: VPPPTKYKTTNK*LKRWHGGVLPT
Trigger: CGTAGGTAGCACTCCACCATGCCATCTCTTCAGCCACTTGTTTGTAGTTTTGTACTTTGTTGGGGGTGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 72 bp CATTTGACATCTTCAGAGTTTCTCGAAGAAACCGCTTaGCTTCGTTGTAGCGGCCCTGGAAGAAGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: HLTSSEFLEETA*LRCSGPGRRRR
Trigger: TCTTCTCCTTCTTCCAGGGCCGCTACAACGAAGCCAAGCGGTTTCTTCGAGAAACTCTGAAGATGTCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR-3UTR CAA 90 bp GCTAGCCCATCTGGGATTTCCCCTCAATCTTTAGCTGTTGGACACTGTGGTGGGTCGAGAGGTCCTTGTTaGAATTGCTGTATGTACAAA +
Preference number: 3 (lower is better)
Translates to: ASPSGISPQSLAVGHCGGSRGPC*NCCMYK
Trigger: TTTGTACATACAGCAATTCAAACAAGGACCTCTCGA...CCCACCACAGTGTCCAACAGCTAAAGATTGAGGGGAAATCCCAGATGGGCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR GCA 72 bp AACACCTGCAGTATAGTTCAGTTTGAGAGGTGTGTTTaGTGTGCACAAGAGCTTGGTTCCACCCCCAACAAA +
Preference number: 3 (lower is better)
Translates to: NTCSIVQFERCV*CAQELGSTPNK
Trigger: TTTGTTGGGGGTGGAACCAAGCTCTTGTGCACAGCAAACACACCTCTCAAACTGAACTATACTGCAGGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR GCA 72 bp ATTTGTAAATGCTCTAAGTGTTCAGGTATGTGTAGATaGCAGAAGAGGGTTGTCAGACCCCCAGAGCTGGAG +
Preference number: 3 (lower is better)
Translates to: ICKCSKCSGMCR*QKRVVRPPELE
Trigger: CTCCAGCTCTGGGGGTCTGACAACCCTCTTCTGGCATCTACACATACCTGAACACTTAGAGCATTTACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR TCA 72 bp GGTGGAGTGCTACCTACGGTCTCAGAAACTTGGGGTTaGAATGTAAGAATTTCCTATGTAAGCCAGTGGAGA +
Preference number: 3 (lower is better)
Translates to: GGVLPTVSETWG*NVRISYVSQWR
Trigger: TCTCCACTGGCTTACATAGGAAATTCTTACATTTCAACCCCAAGTTTCTGAGACCGTAGGTAGCACTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR GCA 72 bp AGTCTTGAGCACTGGGGTCTTGAATTTAGGAACACCTaGAGTATAGTTCAGTTTGAGAGGTGTGTTTGCTGT +
Preference number: 3 (lower is better)
Translates to: SLEHWGLEFRNT*SIVQFERCVCC
Trigger: ACAGCAAACACACCTCTCAAACTGAACTATACTGCAGGTGTTCCTAAATTCAAGACCCCAGTGCTCAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR CCA 72 bp ACAAAGTACAAAACTACAAACAAGTGGCTGAAGAGATaGCATGGTGGAGTGCTACCTACGGTCTCAGAAACT +
Preference number: 3 (lower is better)
Translates to: TKYKTTNKWLKR*HGGVLPTVSET
Trigger: AGTTTCTGAGACCGTAGGTAGCACTCCACCATGCCATCTCTTCAGCCACTTGTTTGTAGTTTTGTACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR TCA 72 bp ACATCAGGACAGATGGCAAGTCGAGAGGTCCTTGTTTaGATTGCTGTATGTACAAAATGCCCTAGAAGCAAA +
Preference number: 3 (lower is better)
Translates to: TSGQMASREVLV*IAVCTKCPRSK
Trigger: TTTGCTTCTAGGGCATTTTGTACATACAGCAATTCAAACAAGGACCTCTCGACTTGCCATCTGTCCTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
3UTR-3UTR CAA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGATACGGTCTCAGAAACTaGGGGTTGAAATGTAAGAAT +
Preference number: 3 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSRYGLRN*GLKCKN
Trigger: ATTCTTACATTTCAACCCCAAGTTTCTGAGACCGTA...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp GAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGGGCCTGTGCGGCCTGTaGGGCGGCAGCCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EEDRRVGSTWPWAVSATWGLCGL*GGSLSC
Trigger: GCAGCTCAGGCTGCCGCCGCACAGGCCGCACAGGCC...CCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp GAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGGGAGGCAGTGTGAGCTaGCCGGGAAGCTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: EEDRRVGSTWPWAVSATWGGSVS*PGSCGP
Trigger: CGGACCACAGCTTCCCGGTCAGCTCACACTGCCTCC...CCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR TCA 90 bp GAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGGCTTCAGGCACGGCTTaGCGCTCTTCACCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: EEDRRVGSTWPWAVSATWASGTA*RSSPAQ
Trigger: CTGGGCAGGTGAAGAGCGTCAAGCCGTGCCTGAAGC...CCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp ACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACCACTCAGGGAGGCAGTGTGAGCTaGCCGGGAAGCTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: TPLPKLLPCTGSPWRTTQGGSVS*PGSCGP
Trigger: CGGACCACAGCTTCCCGGTCAGCTCACACTGCCTCC...CTGAGTGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp CTGGAAGAACAGCAGACCGAGGAAAGTGAGAGCCATTACTCTCCCCTCAGCTTGGGCCTGTGCGGCCTGTaGGGCGGCAGCCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LEEQQTEESESHYSPLSLGLCGL*GGSLSC
Trigger: GCAGCTCAGGCTGCCGCCGCACAGGCCGCACAGGCC...CAAGCTGAGGGGAGAGTAATGGCTCTCACTTTCCTCGGTCTGCTGTTCTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTGGCCTGTGCGGCCTGTaGGGCGGCAGCCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELGLCGL*GGSLSC
Trigger: GCAGCTCAGGCTGCCGCCGCACAGGCCGCACAGGCC...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGACGAGCACACACATGTaGTCCTTGGGCAGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PGTQGLEEDRRVGSTWPWTSTHM*SLGSQW
Trigger: CCACTGGCTGCCCAAGGAGCACATGTGTGTGCTCGT...CCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TGTGAGAAGTTCTGGTGCATCTGTGCGGCTTCATGGGCATCCATGGCGTTCCCACACGCCTTCTCCAGGTaGCTGCGCGCCTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: CEKFWCICAASWASMAFPHAFSR*LRACSL
Trigger: CAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGTG...TGGGAACGCCATGGATGCCCATGAAGCCGCACAGATGCACCAGAACTTCTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGAAGGCCCACAACTCCTaGTGGTTGGTGAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PGTQGLEEDRRVGSTWPWKAHNS*WLVSRR
Trigger: CCTTCGGCTCACCAACCACCAGGAGTTGTGGGCCTT...CCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CAA 72 bp TGCACAGGGGGTGGGCCATCTGTCCACGTAATGAGGTaGTGCTCTGGGAGGCTACAGGCCTCGATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: CTGGGPSVHVMR*CSGRLQASMWS
Trigger: GGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATTACGTGGACAGATGGCCCACCCCCTGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp GCCATTACTCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCACGGCCTGCAGGCAATaGACGCACAAGCGGATCTTG +
Preference number: 4 (lower is better)
Translates to: AITLPSACPGLEATLCSCTACRQ*THKRIL
Trigger: CAAGATCCGCTTGTGCGTTCATTGCCTGCAGGCCGT...GCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp GCTGTGATGCAGGTATTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGAAGGTGGCTGCGCGCCTaGTCGCTGTTCTTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: AVMQVLRVGPWDPRARGRRWLRA*SLFFVW
Trigger: CCACACGAAGAACAGCGAGCAGGCGCGCAGCCACCT...TCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAATACCTGCATCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp GTAACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTTGCTCCAAACCCCACCACGCCTTCTCCAGGTaGCTGCGCGCCTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: VTTSKAPGLIYLTCSKPHHAFSR*LRACSL
Trigger: CAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGTG...GTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050561.13
CDS-3UTR CCA 90 bp GGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTAGCCTAGGGGACTGCTaGCATAGCTGGCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: GWEHLAMGSLCHMAQKGCSLGDC*HSWQTW
Trigger: CCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCT...ACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp AGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGAGCCTAGGGGACTGCTaGCATAGCTGGCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: RRVGSTWPWAVSATWLRKSLGDC*HSWQTW
Trigger: CCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCT...CTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp GCCATTACTCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCGAAGGCTGGCCAGGCTaGTGTTGGGTCCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: AITLPSACPGLEATLCSCEGWPG*CWVHSE
Trigger: CTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTC...GCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp GCTAGCCCATCTGGGATTTCCCCTCAATCTTTAGCTGTTGGACACTGTGGTGGGACCGCCTTCTCCAGGTaGCTGCGCGCCTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: ASPSGISPQSLAVGHCGGTAFSR*LRACSL
Trigger: CAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGGT...CCCACCACAGTGTCCAACAGCTAAAGATTGAGGGGAAATCCCAGATGGGCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168013.3
CDS-3UTR TCA 90 bp GTATGTGTAGATGCCAGAAGAGGGTTGTCAGACCCCCAGAGCTGGAGTTACAGACGGGCCTCGATCCGCTaGGGCGGCTTGAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VCVDARRGLSDPQSWSYRRASIR*GGLKGN
Trigger: GTTCCCCTTCAAGCCGCCTCAGCGGATCGAGGCCCG...TCTGTAACTCCAGCTCTGGGGGTCTGACAACCCTCTTCTGGCATCTACACATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR TCA 90 bp CGTATGTACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACAGCTCTGGACAATGGTaGGGGACTGGTGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: RMYTSSQTPPLHWVTLEDSSGQW*GTGGHP
Trigger: AGGGTGCCCACCAGTCCCTCACCATTGTCCAGAGCT...GTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGTACATACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp TCCATGGGAAAGCTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGCCTGTGCGGCCTGTaGGGCGGCAGCCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SMGKLNSCQEGTLSFRSNGLCGL*GGSLSC
Trigger: GCAGCTCAGGCTGCCGCCGCACAGGCCGCACAGGCC...ATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAGCTTTCCCATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp AGCACTCAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACAGAGCCGAGCTGCAGGTaGGTCCGGGCCTCGATCCGC +
Preference number: 4 (lower is better)
Translates to: STQMMPLHTLSPCSSQVTEPSCR*VRASIR
Trigger: GCGGATCGAGGCCCGGACGCACCTGCAGCTCGGCTC...TGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTGAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp GAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCACGTAATGAGGTTGTaGTCTGGGAGGCTACAGGCC +
Preference number: 4 (lower is better)
Translates to: EEDRRVGSTWPWAVSATWHVMRL*SGRLQA
Trigger: GGCCTGTAGCCTCCCAGAGCACAACCTCATTACGTG...CCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp CTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTTCACGCCTTCTCCAGGTaGCTGCGCGCCTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LMLRLGQDVLLNMSKELLHAFSR*LRACSL
Trigger: CAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGTG...AAGAAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp GAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGTGCAACTGGGCAGCATaGTTGGAGAAGAGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: EEDRRVGSTWPWAVSATWCNWAA*LEKSLG
Trigger: CCCTAGGCTCTTCTCCAACCATGCTGCCCAGTTGCA...CCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp AATGAGGTTGTGCTCTGGGAGGCTACAGGCCTCGATGTGGTCCTGCAGCAGCTGAAGGCCCACAACTCCTaGTGGTTGGTGAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: NEVVLWEATGLDVVLQQLKAHNS*WLVSRR
Trigger: CCTTCGGCTCACCAACCACCAGGAGTTGTGGGCCTT...CAGCTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGAATGAGGTTGTGCTCTaGGAGGCTACAGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: PGTQGLEEDRRVGSTWPWNEVVL*EATGLD
Trigger: ATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATT...CCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR TCA 90 bp CGTATGTACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACACGGCCTGCAGGCAATaGACGCACAAGCGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RMYTSSQTPPLHWVTLEDTACRQ*THKRIL
Trigger: CAAGATCCGCTTGTGCGTTCATTGCCTGCAGGCCGT...GTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGTACATACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp CCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCAGGCACGGCTTaGCGCTCTTCACCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PWAVSATWLRKDVHEGLGASGTA*RSSPAQ
Trigger: CTGGGCAGGTGAAGAGCGTCAAGCCGTGCCTGAAGC...TCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp TGGAACAGGTGCAATTGGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACTGCTTCAGGCACGGCTTaGCGCTCTTCACCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: WNRCNWLSPSEADDGFSTASGTA*RSSPAQ
Trigger: CTGGGCAGGTGAAGAGCGTCAAGCCGTGCCTGAAGC...AGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp CTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTTGGAGGCAGTGTGAGCTaGCCGGGAAGCTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: LMLRLGQDVLLNMSKELLGGSVS*PGSCGP
Trigger: CGGACCACAGCTTCCCGGTCAGCTCACACTGCCTCC...AAGAAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp TGTTTAGGTCTCTCAGGAGGGCAGATGACCACAGCTGCACAGACATGTCTGGGAAGGTGGCTGCGCGCCTaGTCGCTGTTCTTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: CLGLSGGQMTTAAQTCLGRWLRA*SLFFVW
Trigger: CCACACGAAGAACAGCGAGCAGGCGCGCAGCCACCT...TCCCAGACATGTCTGTGCAGCTGTGGTCATCTGCCCTCCTGAGAGACCTAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp GTAACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTTGCTCCAAACCCCACCCTTCTCCAGGTGGCTaGGCGCCTGCTCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VTTSKAPGLIYLTCSKPHPSPGG*APARCS
Trigger: AGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGG...GTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCCCTTCTCCAGGTGGCTaGGCGCCTGCTCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LPHGSERMSMKVLELRPFPSPGG*APARCS
Trigger: AGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGG...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp GCCATTACTCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCAGTGGGTGCACCTCTTaGAGTTTGCGCTCCATCAAC +
Preference number: 4 (lower is better)
Translates to: AITLPSACPGLEATLCSCSGCTS*SLRSIN
Trigger: GTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACT...GCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp GTGTTGGGTCCAAGTTGCGGACACAGGCCTCACAGAAGGCTGGCCAGGCTGGTGAGAGGTCAGCAGGGTTaGTGGGCAGGATTTCATCAT +
Preference number: 4 (lower is better)
Translates to: VLGPSCGHRPHRRLARLVRGQQG*WAGFHH
Trigger: ATGATGAAATCCTGCCCAGCAACCCTGCTGACCTCT...CACCAGCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTGGACCCAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CGTATGTACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACACGAGCACACACATGTaGTCCTTGGGCAGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RMYTSSQTPPLHWVTLEDTSTHM*SLGSQW
Trigger: CCACTGGCTGCCCAAGGAGCACATGTGTGTGCTCGT...GTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGTACATACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGCGGCACATGATGATATaGTCCAGCAGGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: PGTQGLEEDRRVGSTWPWRHMMI*SSRITW
Trigger: CCAAGTGATCCTGCTGGAGCATATCATCATGTGCCG...CCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp ACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACCACTCAGATCTTGCTGGCCAGCTaGATGGCAGGTACCACCATG +
Preference number: 4 (lower is better)
Translates to: TPLPKLLPCTGSPWRTTQILLAS*MAGTTM
Trigger: CATGGTGGTACCTGCCATGCAGCTGGCCAGCAAGAT...CTGAGTGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp GGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTATCTTGCTGGCCAGCTaGATGGCAGGTACCACCATG +
Preference number: 4 (lower is better)
Translates to: GWEHLAMGSLCHMAQKGCILLAS*MAGTTM
Trigger: CATGGTGGTACCTGCCATGCAGCTGGCCAGCAAGAT...ACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp GGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTACATGTCTGGGATCTTaGTGGCCAGCTGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: GWEHLAMGSLCHMAQKGCTCLGS*WPAAWQ
Trigger: CTGCCATGCAGCTGGCCAGCAAGATCCCAGACATGT...ACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp TGTGGCTTAAGGGCTCATATAGGGCTACAGTTAGCCTGGCTCAGGGCTGGCTCTAGCCTAGGGGACTGCTaGCATAGCTGGCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: CGLRAHIGLQLAWLRAGSSLGDC*HSWQTW
Trigger: CCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCT...AGAGCCAGCCCTGAGCCAGGCTAACTGTAGCCCTATATGAGCCCTTAAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp TCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCACTTAGGTTGCTGGCCAGCTGCATaGCAGGTACCACCATGTTGT +
Preference number: 4 (lower is better)
Translates to: SPLSLPWVGGHFVQLHLGCWPAA*QVPPCC
Trigger: ACAACATGGTGGTACCTGCCATGCAGCTGGCCAGCA...ACCTAAGTGCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp ACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACCACTCAGATCTGTGCGGCTTCATaGGCATCCATGGCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TPLPKLLPCTGSPWRTTQICAAS*ASMAFP
Trigger: TGGGAACGCCATGGATGCCCATGAAGCCGCACAGAT...CTGAGTGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
3UTR CAA 72 bp ACCGAGGAAAGTGAGAGCCATTACTCTCCCCTCAGCTaGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TEESESHYSPLS*PWVGGHFVQLH
Trigger: GTGCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGCTCTCACTTTCCTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CAA 72 bp GCGGCTTCATGGGCATCCATGGCGTTCCCACATGCCTaGTTTAGGTCTCTCAGGAGGGCAGATGACCACAGC +
Preference number: 4 (lower is better)
Translates to: AASWASMAFPHA*FRSLRRADDHS
Trigger: GCTGTGGTCATCTGCCCTCCTGAGAGACCTAAACAAGGCATGTGGGAACGCCATGGATGCCCATGAAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CAA 72 bp GTTTTGTTCCCAGAGAGCTCCAGTGTTGGGTCCAAGTaGCGGACACAGGCCTCACAGAAGGCTGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VLFPESSSVGSK*RTQASQKAGQA
Trigger: AGCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCTGGGAACAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
3UTR CAA 72 bp GCACCCTGGTGGTTTTGTTCCCAGAGAGCTCCAGTGTaGGGTCCAAGTTGCGGACACAGGCCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: APWWFCSQRAPV*GPSCGHRPHRR
Trigger: CCTTCTGTGAGGCCTGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCTGGGAACAAAACCACCAGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp GTATGTGTAGATGCCAGAAGAGGGTTGTCAGACCCCCAGAGCTGGAGTTACAGAGCTTCAGGCACGGCTTaGCGCTCTTCACCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VCVDARRGLSDPQSWSYRASGTA*RSSPAQ
Trigger: CTGGGCAGGTGAAGAGCGTCAAGCCGTGCCTGAAGC...TCTGTAACTCCAGCTCTGGGGGTCTGACAACCCTCTTCTGGCATCTACACATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR TCA 90 bp CTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTTCAAGGGAGCAGGCTGTaGGGCGGTTCAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LMLRLGQDVLLNMSKELLQGSRL*GGSGPL
Trigger: CAGAGGACCTGAACCGCCTCACAGCCTGCTCCCTTG...AAGAAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR TCA 90 bp TGGAGGACCACTCAGATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGCAAGGGAGCAGGCTGTaGGGCGGTTCAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WRTTQIKSLTSRSSEVPEQGSRL*GGSGPL
Trigger: CAGAGGACCTGAACCGCCTCACAGCCTGCTCCCTTG...CTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAGTGGTCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp GCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGTGGCTGCGCGCCTaGTCGCTGTTCTTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: APTHIVTLFFSGDTQTQIRWLRA*SLFFVW
Trigger: CCACACGAAGAACAGCGAGCAGGCGCGCAGCCACCT...AATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp GCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTCCTTCTCCAGGTGGCTaGGCGCCTGCTCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: APTHIVTLFFSGDTQTQIPSPGG*APARCS
Trigger: AGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGG...AATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp GCCATTACTCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCAGAGGTCAGCAGGGTTaGTGGGCAGGATTTCATCAT +
Preference number: 4 (lower is better)
Translates to: AITLPSACPGLEATLCSCRGQQG*WAGFHH
Trigger: ATGATGAAATCCTGCCCAGCAACCCTGCTGACCTCT...GCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CGTATGTACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACACATGTCTGGGATCTTaGTGGCCAGCTGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: RMYTSSQTPPLHWVTLEDTCLGS*WPAAWQ
Trigger: CTGCCATGCAGCTGGCCAGCAAGATCCCAGACATGT...GTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGTACATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp GCCATTACTCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCGTTGTGAGATCTGGATaGCTTTCCGCAGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: AITLPSACPGLEATLCSCVVRSG*LSAAVV
Trigger: AACCACTGCTGCGGAAAGCCATCCAGATCTCACAAC...GCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp GAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGGTTGTGAGATCTGGATaGCTTTCCGCAGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: EEDRRVGSTWPWAVSATWVVRSG*LSAAVV
Trigger: AACCACTGCTGCGGAAAGCCATCCAGATCTCACAAC...CCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp GCCATTACTCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCAACAGTGTGTGCAACTaGGCAGCATGGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AITLPSACPGLEATLCSCNSVCN*AAWLEK
Trigger: CTTCTCCAACCATGCTGCCCAGTTGCACACACTGTT...GCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TGTGGCTTAAGGGCTCATATAGGGCTACAGTTAGCCTGGCTCAGGGCTGGCTCTAAGGCCCACAACTCCTaGTGGTTGGTGAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: CGLRAHIGLQLAWLRAGSKAHNS*WLVSRR
Trigger: CCTTCGGCTCACCAACCACCAGGAGTTGTGGGCCTT...AGAGCCAGCCCTGAGCCAGGCTAACTGTAGCCCTATATGAGCCCTTAAGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp GGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTAATGAGGTTGTGCTCTaGGAGGCTACAGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GWEHLAMGSLCHMAQKGCNEVVL*EATGLD
Trigger: ATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATT...ACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
3UTR CAA 72 bp GACAATGGTGAGGGACTGGTGGGCACCCTGGTGGTTTaGTTCCCAGAGAGCTCCAGTGTTGGGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: DNGEGLVGTLVV*FPESSSVGSKL
Trigger: CAACTTGGACCCAACACTGGAGCTCTCTGGGAACAAAACCACCAGGGTGCCCACCAGTCCCTCACCATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp TGGAACAGGTGCAATTGGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACTACGGCCTGCAGGCAATaGACGCACAAGCGGATCTTG +
Preference number: 4 (lower is better)
Translates to: WNRCNWLSPSEADDGFSTTACRQ*THKRIL
Trigger: CAAGATCCGCTTGTGCGTTCATTGCCTGCAGGCCGT...AGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp TGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTTCTGCCCACACAGTGTaGGCAGTGGGTGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: WPWAVSATWLRKDVHEGLSAHTV*AVGAPL
Trigger: AAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGA...AAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp TATGTACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACCAAGTGTGGAGATGGTCTaGATGCACTGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: YVHLFPNSSPALGHLGGPSVEMV*MHCCSC
Trigger: GCAGCTGCAGCAGTGCATTCAGACCATCTCCACACT...TGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGTACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp ACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCACAAGGGAGCAGGCTGTaGGGCGGTTCAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: THIVTLFFSGDTQTQIRPQGSRL*GGSGPL
Trigger: CAGAGGACCTGAACCGCCTCACAGCCTGCTCCCTTG...TGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR TCA 90 bp TGGGACTTCTGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCCTGCAGCAGCTGCTGTaGGAAGTTCTGGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: WDFCLMLRLGQDVLLNMSLQQLL*EVLVHL
Trigger: CAGATGCACCAGAACTTCTCACAGCAGCTGCTGCAG...GCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCAGAAGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR TCA 90 bp TGGGACTTCTGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCGTGTTGGGTCCATTCTaGGCTTGGAACTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: WDFCLMLRLGQDVLLNMSVLGPF*AWNCTG
Trigger: CCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACAC...GCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCAGAAGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp AAGACTGGGGGAATAGTGGTCCTAAAGGGAGAGACCAGCAAACAGACTTCTCACAGGTGGCTGCGCGCCTaGTCGCTGTTCTTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: KTGGIVVLKGETSKQTSHRWLRA*SLFFVW
Trigger: CCACACGAAGAACAGCGAGCAGGCGCGCAGCCACCT...GTGAGAAGTCTGTTTGCTGGTCTCTCCCTTTAGGACCACTATTCCCCCAGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp CTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCCTTCTCCAGGTGGCTaGGCGCCTGCTCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LHTLSPCSSQVTPRHRLGPSPGG*APARCS
Trigger: AGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGG...GCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CGTATGTACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACAAGAGCAGGCGACAGTaGCAGTATGGCGTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RMYTSSQTPPLHWVTLEDKSRRQ*QYGVCC
Trigger: ACAACAGACGCCATACTGGCACTGTCGCCTGCTCTT...GTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGTACATACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAATGCACTGCTGCAGCTaGTTCAGGCACGGCTTGACG +
Preference number: 4 (lower is better)
Translates to: PWAVSATWLRKDVHEGLGMHCCS*FRHGLT
Trigger: CGTCAAGCCGTGCCTGAAGCAGCTGCAGCAGTGCAT...TCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp AGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGCGGCACATGATGATATaGTCCAGCAGGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: RRVGSTWPWAVSATWLRKRHMMI*SSRITW
Trigger: CCAAGTGATCCTGCTGGAGCATATCATCATGTGCCG...CTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp TGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTAAGAGCCTAGGGGACTaGTGGCATAGCTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: WPWAVSATWLRKDVHEGLKSLGD*WHSWQT
Trigger: GGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTT...AAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp TGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGCCTCGATGTGGTCCTaGAGCAGCTGCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: WPWAVSATWLRKDVHEGLASMWS*SSCCEK
Trigger: CTTCTCACAGCAGCTGCTGCAGGACCACATCGAGGC...AAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp TCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCACTTAGGTGTCTGTTGTGAGATCTaGATGGCTTTCCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SPLSLPWVGGHFVQLHLGVCCEI*MAFRSS
Trigger: ACTGCTGCGGAAAGCCATCCAGATCTCACAACAGAC...ACCTAAGTGCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp AACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTTGCTCCAAACCCCACCATCCTTGGGCAGCCAGTaGAAGAGGTCAGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NNQQSPRTHLPHLLQTPPSLGSQ*KRSAGL
Trigger: CAACCCTGCTGACCTCTTCCACTGGCTGCCCAAGGA...TGGTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCTCCTTGGGCAGCCAGTaGAAGAGGTCAGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LPHGSERMSMKVLELRPFSLGSQ*KRSAGL
Trigger: CAACCCTGCTGACCTCTTCCACTGGCTGCCCAAGGA...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGGTTGGGAGTCCAGCAGGATCACTTaGAAAGACGACAGGATAGGG +
Preference number: 4 (lower is better)
Translates to: LRVGPWDPRARGRQKGWESSRIT*KDDRIG
Trigger: CCCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGA...CTCCCAACCCTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp GGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCGACTGCTGGCATAGCTaGCAGACCTGGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: GSERMSMKVLELRPFSHGDCWHS*QTWEIS
Trigger: GGAGATCTCCCAGGTCTGCCAGCTATGCCAGCAGTC...GCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAAAGGCCCACAACTCCTaGTGGTTGGTGAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PWAVSATWLRKDVHEGLGKAHNS*WLVSRR
Trigger: CCTTCGGCTCACCAACCACCAGGAGTTGTGGGCCTT...TCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TATGTACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACCATGCTGGCCAGCTGCATaGCAGGTACCACCATGTTGT +
Preference number: 4 (lower is better)
Translates to: YVHLFPNSSPALGHLGGPCWPAA*QVPPCC
Trigger: ACAACATGGTGGTACCTGCCATGCAGCTGGCCAGCA...TGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGTACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp GTAACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTTGCTCCAAACCCCACGAAGGCTGGCCAGGCTaGTGTTGGGTCCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: VTTSKAPGLIYLTCSKPHEGWPG*CWVHSE
Trigger: CTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTC...GTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR TCA 90 bp TGGAGGACCACTCAGATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTCTGCCCACACAGTGTaGGCAGTGGGTGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: WRTTQIKSLTSRSSEVPESAHTV*AVGAPL
Trigger: AAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGA...CTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAGTGGTCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp CTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTTTCTGCCCACACAGTGTaGGCAGTGGGTGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: LMLRLGQDVLLNMSKELLSAHTV*AVGAPL
Trigger: AAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGA...AAGAAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTGTGGAGATGGTCTaGATGCACTGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPHGSERMSMKVLELRPFSVEMV*MHCCSC
Trigger: GCAGCTGCAGCAGTGCATTCAGACCATCTCCACACT...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp AGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGCAGGTCCTCTGCATTTaGCATCTTCAGAGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: RRVGSTWPWAVSATWLRKQVLCI*HLQSFS
Trigger: CGAGAAACTCTGAAGATGTCAAATGCAGAGGACCTG...CTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp AGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGCAGTTCTCTACAATCTaGCCACACAGTGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RRVGSTWPWAVSATWLRKQFSTI*PHSVSS
Trigger: ACTGCTCACACTGTGTGGGCAGATTGTAGAGAACTG...CTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp GCAGTGGATGCTCCTCCCTTGAGTCTTGAGCACTGGGGTCTTGAATTTAGGAACATGCACTGCTGCAGCTaGTTCAGGCACGGCTTGACG +
Preference number: 4 (lower is better)
Translates to: AVDAPPLSLEHWGLEFRNMHCCS*FRHGLT
Trigger: CGTCAAGCCGTGCCTGAAGCAGCTGCAGCAGTGCAT...GTTCCTAAATTCAAGACCCCAGTGCTCAAGACTCAAGGGAGGAGCATCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp GCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTATGCACTGCTGCAGCTaGTTCAGGCACGGCTTGACG +
Preference number: 4 (lower is better)
Translates to: APTHIVTLFFSGDTQTQIMHCCS*FRHGLT
Trigger: CGTCAAGCCGTGCCTGAAGCAGCTGCAGCAGTGCAT...AATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp ATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGGACACTGGAATGCACTGCTGCAGCTaGTTCAGGCACGGCTTGACG +
Preference number: 4 (lower is better)
Translates to: IKSLTSRSSEVPECRDTGMHCCS*FRHGLT
Trigger: CGTCAAGCCGTGCCTGAAGCAGCTGCAGCAGTGCAT...TCCAGTGTCCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp GTATGTGTAGATGCCAGAAGAGGGTTGTCAGACCCCCAGAGCTGGAGTTACAGAAAGAGCCTAGGGGACTaGTGGCATAGCTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: VCVDARRGLSDPQSWSYRKSLGD*WHSWQT
Trigger: GGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTT...TCTGTAACTCCAGCTCTGGGGGTCTGACAACCCTCTTCTGGCATCTACACATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp ATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGGACACTGGAGCCTCGATGTGGTCCTaGAGCAGCTGCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: IKSLTSRSSEVPECRDTGASMWS*SSCCEK
Trigger: CTTCTCACAGCAGCTGCTGCAGGACCACATCGAGGC...TCCAGTGTCCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCGGCTTTCCGCAGCAGTaGTTTTGCTGCATCCACGGA +
Preference number: 4 (lower is better)
Translates to: LPHGSERMSMKVLELRPFGFPQQ*FCCIHG
Trigger: TCCGTGGATGCAGCAAAACCACTGCTGCGGAAAGCC...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGACAGAAGGGTTGGGAGCATGTAGTGTGGAGATaGTCTGAATGCACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LRVGPWDPRARGRQKGWEHVVWR*SECTAA
Trigger: TGCAGCAGTGCATTCAGACCATCTCCACACTACATG...CTCCCAACCCTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp ATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGGACACTGGAGACTGCTGGCATAGCTaGCAGACCTGGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: IKSLTSRSSEVPECRDTGDCWHS*QTWEIS
Trigger: GGAGATCTCCCAGGTCTGCCAGCTATGCCAGCAGTC...TCCAGTGTCCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp GTGATTTCCCAACACATAGAAGATGTGACCCAGCAGCACAAGGGAGCAGGCTGTGACTGCTGGCATAGCTaGCAGACCTGGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: VISQHIEDVTQQHKGAGCDCWHS*QTWEIS
Trigger: GGAGATCTCCCAGGTCTGCCAGCTATGCCAGCAGTC...ACAGCCTGCTCCCTTGTGCTGCTGGGTCACATCTTCTATGTGTTGGGAAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTTGCAACTGGGCAGCATaGTTGGAGAAGAGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELCNWAA*LEKSLG
Trigger: CCCTAGGCTCTTCTCCAACCATGCTGCCCAGTTGCA...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTTGCAACTGGGCAGCATaGTTGGAGAAGAGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: WPWAVSATWLRKDVHEGLCNWAA*LEKSLG
Trigger: CCCTAGGCTCTTCTCCAACCATGCTGCCCAGTTGCA...AAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp GAGGAAGACAGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGAGGGCTGTGGTAAATTaGGCTTCAGCATTATCCATG +
Preference number: 4 (lower is better)
Translates to: EEDRRVGSTWPWAVSATWRAVVN*ASALSM
Trigger: CATGGATAATGCTGAAGCCCAATTTACCACAGCCCT...CCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCTGTCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TGGAACAGGTGCAATTGGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACTCTGCACAGACATGTCTaGGATCTTGCTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: WNRCNWLSPSEADDGFSTLHRHV*DLAGQL
Trigger: CAGCTGGCCAGCAAGATCCCAGACATGTCTGTGCAG...AGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCCTGCACAGACATGTCTaGGATCTTGCTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPHGSERMSMKVLELRPFLHRHV*DLAGQL
Trigger: CAGCTGGCCAGCAAGATCCCAGACATGTCTGTGCAG...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp TGGAACAGGTGCAATTGGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACTATCTGTGCGGCTTCATaGGCATCCATGGCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: WNRCNWLSPSEADDGFSTICAAS*ASMAFP
Trigger: TGGGAACGCCATGGATGCCCATGAAGCCGCACAGAT...AGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
3UTR CAA 72 bp AACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTaGCTCCAAACCCCACCATCCAGGGTTGGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: NNQQSPRTHLPH*LQTPPSRVGEV
Trigger: TACCTCACCAACCCTGGATGGTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR TCA 90 bp GCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTGCAGCATCCCCTTGCTaGGCAGGAATAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: APTHIVTLFFSGDTQTQIAASPC*AGIMPL
Trigger: CAAGGGCATTATTCCTGCTCAGCAAGGGGATGCTGC...AATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp CTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTTGCAGCATCCCCTTGCTaGGCAGGAATAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LMLRLGQDVLLNMSKELLAASPC*AGIMPL
Trigger: CAAGGGCATTATTCCTGCTCAGCAAGGGGATGCTGC...AAGAAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp TCAGGTGACACCCAGACACAGATTAGGCCATCAGTCCCTTCAATAGATGGCACTTCTGCCCACACAGTGTaGGCAGTGGGTGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SGDTQTQIRPSVPSIDGTSAHTV*AVGAPL
Trigger: AAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGA...AGTGCCATCTATTGAAGGGACTGATGGCCTAATCTGTGTCTGGGTGTCACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp GCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTCTGCAGCAGCTGCTGTaGGAAGTTCTGGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: APTHIVTLFFSGDTQTQILQQLL*EVLVHL
Trigger: CAGATGCACCAGAACTTCTCACAGCAGCTGCTGCAG...AATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR TCA 90 bp ATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGGACACTGGAGTGTTGGGTCCATTCTaGGCTTGGAACTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: IKSLTSRSSEVPECRDTGVLGPF*AWNCTG
Trigger: CCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACAC...TCCAGTGTCCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR TCA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCTCAAACTGTGGGATTTaGGAGGAGGCAAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSASNCGI*EEASTA
Trigger: GGCGGTGCTTGCCTCCTCTCAAATCCCACAGTTTGA...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp GTAACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTTGCTCCAAACCCCACAAGAGCAGGCGACAGTaGCAGTATGGCGTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VTTSKAPGLIYLTCSKPHKSRRQ*QYGVCC
Trigger: ACAACAGACGCCATACTGGCACTGTCGCCTGCTCTT...GTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTTGGATGGGGTTGCCCTaGCAGTTCTCTACAATCTGC +
Preference number: 4 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELWMGLP*QFSTIC
Trigger: GCAGATTGTAGAGAACTGGCAGGGCAACCCCATCCA...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp TGTTTAGGTCTCTCAGGAGGGCAGATGACCACAGCTGCACAGACATGTCTGGGATGGATGGGGTTGCCCTaGCAGTTCTCTACAATCTGC +
Preference number: 4 (lower is better)
Translates to: CLGLSGGQMTTAAQTCLGWMGLP*QFSTIC
Trigger: GCAGATTGTAGAGAACTGGCAGGGCAACCCCATCCA...TCCCAGACATGTCTGTGCAGCTGTGGTCATCTGCCCTCCTGAGAGACCTAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp TGGAACAGGTGCAATTGGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACTCCTTCTGGATGGGGTTaGCCTGCCAGTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: WNRCNWLSPSEADDGFSTPSGWG*PASSLQ
Trigger: TTGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGG...AGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp ACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCAACGAGCACACACATGTaGTCCTTGGGCAGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: THIVTLFFSGDTQTQIRPTSTHM*SLGSQW
Trigger: CCACTGGCTGCCCAAGGAGCACATGTGTGTGCTCGT...TGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp TCAGGTGACACCCAGACACAGATTAGGCCATCAGTCCCTTCAATAGATGGCACTAAGAGCCTAGGGGACTaGTGGCATAGCTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: SGDTQTQIRPSVPSIDGTKSLGD*WHSWQT
Trigger: GGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTT...AGTGCCATCTATTGAAGGGACTGATGGCCTAATCTGTGTCTGGGTGTCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCATCAAAGAGCCTAGGGGACTaGTGGCATAGCTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: HIVTLFFSGDTQTQIRPSKSLGD*WHSWQT
Trigger: GGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTT...TGATGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTTATCTTGCTGGCCAGCTaGATGGCAGGTACCACCATG +
Preference number: 4 (lower is better)
Translates to: LMLRLGQDVLLNMSKELLILLAS*MAGTTM
Trigger: CATGGTGGTACCTGCCATGCAGCTGGCCAGCAAGAT...AAGAAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp CAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGATGGTCCTGCAGCAGCTaGTGTGAGAAGTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QMMPLHTLSPCSSQVTPRWSCSS*CEKFWC
Trigger: GCACCAGAACTTCTCACAGCAGCTGCTGCAGGACCA...TCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp AAGACTGGGGGAATAGTGGTCCTAAAGGGAGAGACCAGCAAACAGACTTCTCACGCCTCGATGTGGTCCTaGAGCAGCTGCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KTGGIVVLKGETSKQTSHASMWS*SSCCEK
Trigger: CTTCTCACAGCAGCTGCTGCAGGACCACATCGAGGC...GTGAGAAGTCTGTTTGCTGGTCTCTCCCTTTAGGACCACTATTCCCCCAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCCACGTAATGAGGTTGTaGTCTGGGAGGCTACAGGCC +
Preference number: 4 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSAHVMRL*SGRLQA
Trigger: GGCCTGTAGCCTCCCAGAGCACAACCTCATTACGTG...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp TCAGGTGACACCCAGACACAGATTAGGCCATCAGTCCCTTCAATAGATGGCACTTCCTTGGGCAGCCAGTaGAAGAGGTCAGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: SGDTQTQIRPSVPSIDGTSLGSQ*KRSAGL
Trigger: CAACCCTGCTGACCTCTTCCACTGGCTGCCCAAGGA...AGTGCCATCTATTGAAGGGACTGATGGCCTAATCTGTGTCTGGGTGTCACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp AACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTTGCTCCAAACCCCACCACATAGCTGGCAGACCTaGGAGATCTCCTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: NNQQSPRTHLPHLLQTPPHSWQT*EISCSA
Trigger: TGCACTACAGGAGATCTCCCAGGTCTGCCAGCTATG...TGGTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp CACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCATCAGACTGCTGGCATAGCTaGCAGACCTGGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: HIVTLFFSGDTQTQIRPSDCWHS*QTWEIS
Trigger: GGAGATCTCCCAGGTCTGCCAGCTATGCCAGCAGTC...TGATGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TCCATGGGAAAGCTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATAGCCTAGGGGACTGCTaGCATAGCTGGCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: SMGKLNSCQEGTLSFRSNSLGDC*HSWQTW
Trigger: CCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCT...ATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAGCTTTCCCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TATGTACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACCAAACAGTGTGTGCAACTaGGCAGCATGGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YVHLFPNSSPALGHLGGPNSVCN*AAWLEK
Trigger: CTTCTCCAACCATGCTGCCCAGTTGCACACACTGTT...TGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGTACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCTGCTGGCCAGCTGCATaGCAGGTACCACCATGTTGT +
Preference number: 4 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSACWPAA*QVPPCC
Trigger: ACAACATGGTGGTACCTGCCATGCAGCTGGCCAGCA...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp TGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTCTTCATGGGCATCCATaGCGTTCCCACATGCCTTGT +
Preference number: 4 (lower is better)
Translates to: WPWAVSATWLRKDVHEGLLHGHP*RSHMPC
Trigger: ACAAGGCATGTGGGAACGCCATGGATGCCCATGAAG...AAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp GCAGTGGATGCTCCTCCCTTGAGTCTTGAGCACTGGGGTCTTGAATTTAGGAACATCTGTGCGGCTTCATaGGCATCCATGGCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: AVDAPPLSLEHWGLEFRNICAAS*ASMAFP
Trigger: TGGGAACGCCATGGATGCCCATGAAGCCGCACAGAT...GTTCCTAAATTCAAGACCCCAGTGCTCAAGACTCAAGGGAGGAGCATCCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAATGAGGTTGTGCTCTaGGAGGCTACAGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: LPHGSERMSMKVLELRPFNEVVL*EATGLD
Trigger: ATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATT...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp ATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGGACACTGGATGGCCAGGCTGGTGTTaGGTCCATTCTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: IKSLTSRSSEVPECRDTGWPGWC*VHSELG
Trigger: TCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCA...TCCAGTGTCCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGAGAGCTCCAGTGTTaGGTCCAAGTTGCGGACACA +
Preference number: 4 (lower is better)
Translates to: LPHGSERMSMKVLELRPFRELQC*VQVADT
Trigger: TGTGTCCGCAACTTGGACCCAACACTGGAGCTCTCT...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212308.2
3UTR CAA 72 bp GTTCGGTTGAGCACTCAGATGATGCCCCTACACACATaGTCACCCTGTTCTTCTCAGGTGACACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: VRLSTQMMPLHT*SPCSSQVTPRH
Trigger: GTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTGAGTGCTCAACCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CAA 72 bp GGCTTCCAAAGCTCTGAGAAGTGGTCTTCACATTGCTaGGTGAGCACCTGCCTAGATACCATGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GFQSSEKWSSHC*VSTCLDTMSWQ
Trigger: CTGCCAGCTCATGGTATCTAGGCAGGTGCTCACCAAGCAATGTGAAGACCACTTCTCAGAGCTTTGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
3UTR CAA 72 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTaGGAGCTTCGTCCCTTCAGTCATGGCTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LPHGSERMSMKV*ELRPFSHGFQS
Trigger: GCTTTGGAAGCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp AAGACTGGGGGAATAGTGGTCCTAAAGGGAGAGACCAGCAAACAGACTTCTCACGCAGCATCCCCTTGCTaGGCAGGAATAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KTGGIVVLKGETSKQTSHAASPC*AGIMPL
Trigger: CAAGGGCATTATTCCTGCTCAGCAAGGGGATGCTGC...GTGAGAAGTCTGTTTGCTGGTCTCTCCCTTTAGGACCACTATTCCCCCAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR TCA 90 bp ACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCAGCAGCATCCCCTTGCTaGGCAGGAATAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: THIVTLFFSGDTQTQIRPAASPC*AGIMPL
Trigger: CAAGGGCATTATTCCTGCTCAGCAAGGGGATGCTGC...TGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp ACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCAAGTGTGGAGATGGTCTaGATGCACTGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: THIVTLFFSGDTQTQIRPSVEMV*MHCCSC
Trigger: GCAGCTGCAGCAGTGCATTCAGACCATCTCCACACT...TGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp AGCACTCAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACTGCAGCAGCTGCTGTaGGAAGTTCTGGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: STQMMPLHTLSPCSSQVTLQQLL*EVLVHL
Trigger: CAGATGCACCAGAACTTCTCACAGCAGCTGCTGCAG...TGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTGAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR TCA 90 bp CACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCATCAGTGTTGGGTCCATTCTaGGCTTGGAACTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: HIVTLFFSGDTQTQIRPSVLGPF*AWNCTG
Trigger: CCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACAC...TGATGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp TGGAGGACCACTCAGATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGCCTTCTGGATGGGGTTaGCCTGCCAGTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: WRTTQIKSLTSRSSEVPEPSGWG*PASSLQ
Trigger: TTGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGG...CTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAGTGGTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp TCCATGGGAAAGCTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATACGAGCACACACATGTaGTCCTTGGGCAGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SMGKLNSCQEGTLSFRSNTSTHM*SLGSQW
Trigger: CCACTGGCTGCCCAAGGAGCACATGTGTGTGCTCGT...ATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAGCTTTCCCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCGGCACATGATGATATaGTCCAGCAGGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELRHMMI*SSRITW
Trigger: CCAAGTGATCCTGCTGGAGCATATCATCATGTGCCG...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp ACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCAACATGTCTGGGATCTTaGTGGCCAGCTGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: TWLRKDVHEGLGASSLQSTCLGS*WPAAWQ
Trigger: CTGCCATGCAGCTGGCCAGCAAGATCCCAGACATGT...TGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp GCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTGTTCTGGTGCATCTGTaGGGCTTCATGGGCATCCAT +
Preference number: 4 (lower is better)
Translates to: APTHIVTLFFSGDTQTQIVLVHL*GFMGIH
Trigger: ATGGATGCCCATGAAGCCGCACAGATGCACCAGAAC...AATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp CTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTTGTTCTGGTGCATCTGTaGGGCTTCATGGGCATCCAT +
Preference number: 4 (lower is better)
Translates to: LMLRLGQDVLLNMSKELLVLVHL*GFMGIH
Trigger: ATGGATGCCCATGAAGCCGCACAGATGCACCAGAAC...AAGAAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp CTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTTATCGTAATGAGGTTGTaGTCTGGGAGGCTACAGGCC +
Preference number: 4 (lower is better)
Translates to: LMLRLGQDVLLNMSKELLIVMRL*SGRLQA
Trigger: GGCCTGTAGCCTCCCAGAGCACAACCTCATTACGAT...AAGAAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp TCCATGGGAAAGCTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATTCCTTGGGCAGCCAGTaGAAGAGGTCAGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: SMGKLNSCQEGTLSFRSNSLGSQ*KRSAGL
Trigger: CAACCCTGCTGACCTCTTCCACTGGCTGCCCAAGGA...ATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAGCTTTCCCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCTCCAGCAGGATCACTTaGAAAGACGACAGGATAGGG +
Preference number: 4 (lower is better)
Translates to: LPHGSERMSMKVLELRPFSSRIT*KDDRIG
Trigger: CCCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGA...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TGGAGGACCACTCAGATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGCATAGCTGGCAGACCTaGGAGATCTCCTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: WRTTQIKSLTSRSSEVPEHSWQT*EISCSA
Trigger: TGCACTACAGGAGATCTCCCAGGTCTGCCAGCTATG...CTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAGTGGTCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp GCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTCATAGCTGGCAGACCTaGGAGATCTCCTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: APTHIVTLFFSGDTQTQIHSWQT*EISCSA
Trigger: TGCACTACAGGAGATCTCCCAGGTCTGCCAGCTATG...AATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTAACAGTGTGTGCAACTaGGCAGCATGGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELNSVCN*AAWLEK
Trigger: CTTCTCCAACCATGCTGCCCAGTTGCACACACTGTT...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CTGGAAGAACAGCAGACCGAGGAAAGTGAGAGCCATTACTCTCCCCTCAGCTTGAACAGTGTGTGCAACTaGGCAGCATGGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LEEQQTEESESHYSPLSLNSVCN*AAWLEK
Trigger: CTTCTCCAACCATGCTGCCCAGTTGCACACACTGTT...CAAGCTGAGGGGAGAGTAATGGCTCTCACTTTCCTCGGTCTGCTGTTCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp GCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTCTTCATGGGCATCCATaGCGTTCCCACATGCCTTGT +
Preference number: 4 (lower is better)
Translates to: APTHIVTLFFSGDTQTQILHGHP*RSHMPC
Trigger: ACAAGGCATGTGGGAACGCCATGGATGCCCATGAAG...AATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp CTGGAAGAACAGCAGACCGAGGAAAGTGAGAGCCATTACTCTCCCCTCAGCTTGTGCTGTGAGAAGTTCTaGTGCATCTGTGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LEEQQTEESESHYSPLSLCCEKF*CICAAS
Trigger: TGAAGCCGCACAGATGCACCAGAACTTCTCACAGCA...CAAGCTGAGGGGAGAGTAATGGCTCTCACTTTCCTCGGTCTGCTGTTCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp TCAGGTGACACCCAGACACAGATTAGGCCATCAGTCCCTTCAATAGATGGCACTTGGCCAGGCTGGTGTTaGGTCCATTCTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SGDTQTQIRPSVPSIDGTWPGWC*VHSELG
Trigger: TCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCA...AGTGCCATCTATTGAAGGGACTGATGGCCTAATCTGTGTCTGGGTGTCACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp CTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCTGGCCAGGCTGGTGTTaGGTCCATTCTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LHTLSPCSSQVTPRHRLGWPGWC*VHSELG
Trigger: TCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCA...GCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR TCA 90 bp TCCATGGGAAAGCTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATAGTGTGGAGATGGTCTaGATGCACTGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SMGKLNSCQEGTLSFRSNSVEMV*MHCCSC
Trigger: GCAGCTGCAGCAGTGCATTCAGACCATCTCCACACT...ATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAGCTTTCCCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp TGGAACAGGTGCAATTGGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACTCAGGTCCTCTGCATTTaGCATCTTCAGAGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: WNRCNWLSPSEADDGFSTQVLCI*HLQSFS
Trigger: CGAGAAACTCTGAAGATGTCAAATGCAGAGGACCTG...AGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp ACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCAAAGAGCAGGCGACAGTaGCAGTATGGCGTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TWLRKDVHEGLGASSLQSKSRRQ*QYGVCC
Trigger: ACAACAGACGCCATACTGGCACTGTCGCCTGCTCTT...TGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCATCAAGTGGGTGCACCTCTTaGAGTTTGCGCTCCATCAAC +
Preference number: 4 (lower is better)
Translates to: HIVTLFFSGDTQTQIRPSSGCTS*SLRSIN
Trigger: GTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACT...TGATGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp AAACAAGTGGCTGAAGAGATGGCATGGTGGAGTGCTACCTACGGTCTCAGAAACAGTGGGTGCACCTCTTaGAGTTTGCGCTCCATCAAC +
Preference number: 4 (lower is better)
Translates to: KQVAEEMAWWSATYGLRNSGCTS*SLRSIN
Trigger: GTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACT...GTTTCTGAGACCGTAGGTAGCACTCCACCATGCCATCTCTTCAGCCACTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp CATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATAGTGGGTGCACCTCTTaGAGTTTGCGCTCCATCAAC +
Preference number: 4 (lower is better)
Translates to: HGSERMSMKVLELRPFSHSGCTS*SLRSIN
Trigger: GTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACT...ATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp TGGAACAGGTGCAATTGGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACTCAGTTCTCTACAATCTaGCCACACAGTGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: WNRCNWLSPSEADDGFSTQFSTI*PHSVSS
Trigger: ACTGCTCACACTGTGTGGGCAGATTGTAGAGAACTG...AGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGACAGTTCTCTACAATCTaGCCACACAGTGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PWAVSATWLRKDVHEGLGQFSTI*PHSVSS
Trigger: ACTGCTCACACTGTGTGGGCAGATTGTAGAGAACTG...TCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp AAACAAGTGGCTGAAGAGATGGCATGGTGGAGTGCTACCTACGGTCTCAGAAACTGGATGGGGTTGCCCTaGCAGTTCTCTACAATCTGC +
Preference number: 4 (lower is better)
Translates to: KQVAEEMAWWSATYGLRNWMGLP*QFSTIC
Trigger: GCAGATTGTAGAGAACTGGCAGGGCAACCCCATCCA...GTTTCTGAGACCGTAGGTAGCACTCCACCATGCCATCTCTTCAGCCACTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp CACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCATCACCTTCTGGATGGGGTTaGCCTGCCAGTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: HIVTLFFSGDTQTQIRPSPSGWG*PASSLQ
Trigger: TTGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGG...TGATGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp CATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATCCTTCTGGATGGGGTTaGCCTGCCAGTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: HGSERMSMKVLELRPFSHPSGWG*PASSLQ
Trigger: TTGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGG...ATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp GTATGTGTAGATGCCAGAAGAGGGTTGTCAGACCCCCAGAGCTGGAGTTACAGACGGCACATGATGATATaGTCCAGCAGGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: VCVDARRGLSDPQSWSYRRHMMI*SSRITW
Trigger: CCAAGTGATCCTGCTGGAGCATATCATCATGTGCCG...TCTGTAACTCCAGCTCTGGGGGTCTGACAACCCTCTTCTGGCATCTACACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCTGTGAGAAGTTCTGGTaGATCTGTGCGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSACEKFW*ICAASW
Trigger: CCATGAAGCCGCACAGATGCACCAGAACTTCTCACA...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp CAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGATGTGAGAAGTTCTGGTaGATCTGTGCGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: QMMPLHTLSPCSSQVTPRCEKFW*ICAASW
Trigger: CCATGAAGCCGCACAGATGCACCAGAACTTCTCACA...TCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR GCA 90 bp ACTCAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCTGTGAGAAGTTCTGGTaGATCTGTGCGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: TQMMPLHTLSPCSSQVTPCEKFW*ICAASW
Trigger: CCATGAAGCCGCACAGATGCACCAGAACTTCTCACA...GGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp AGCACAAGGGCTGGACCAGGCTCTCCTTTACTGGGTTATTCATATTTCACTGTGGGCTTTCCGCAGCAGTaGTTTTGCTGCATCCACGGA +
Preference number: 4 (lower is better)
Translates to: STRAGPGSPLLGYSYFTVGFPQQ*FCCIHG
Trigger: TCCGTGGATGCAGCAAAACCACTGCTGCGGAAAGCC...CACAGTGAAATATGAATAACCCAGTAAAGGAGAGCCTGGTCCAGCCCTTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp CAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGAGTTGTGAGATCTGGATaGCTTTCCGCAGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: QMMPLHTLSPCSSQVTPRVVRSG*LSAAVV
Trigger: AACCACTGCTGCGGAAAGCCATCCAGATCTCACAAC...TCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGAGTCTGTTGTGAGATCTaGATGGCTTTCCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QMMPLHTLSPCSSQVTPRVCCEI*MAFRSS
Trigger: ACTGCTGCGGAAAGCCATCCAGATCTCACAACAGAC...TCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TGGGACTTCTGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAGGGCTGTGGTAAATTaGGCTTCAGCATTATCCATG +
Preference number: 4 (lower is better)
Translates to: WDFCLMLRLGQDVLLNMSRAVVN*ASALSM
Trigger: CATGGATAATGCTGAAGCCCAATTTACCACAGCCCT...GCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCAGAAGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp AGCACTCAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACTTCATGGGCATCCATaGCGTTCCCACATGCCTTGT +
Preference number: 4 (lower is better)
Translates to: STQMMPLHTLSPCSSQVTLHGHP*RSHMPC
Trigger: ACAAGGCATGTGGGAACGCCATGGATGCCCATGAAG...TGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp GCAGTGGATGCTCCTCCCTTGAGTCTTGAGCACTGGGGTCTTGAATTTAGGAACTGCTGTGAGAAGTTCTaGTGCATCTGTGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: AVDAPPLSLEHWGLEFRNCCEKF*CICAAS
Trigger: TGAAGCCGCACAGATGCACCAGAACTTCTCACAGCA...GTTCCTAAATTCAAGACCCCAGTGCTCAAGACTCAAGGGAGGAGCATCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp ATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGGACACTGGATGCTGTGAGAAGTTCTaGTGCATCTGTGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: IKSLTSRSSEVPECRDTGCCEKF*CICAAS
Trigger: TGAAGCCGCACAGATGCACCAGAACTTCTCACAGCA...TCCAGTGTCCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
3UTR CAA 72 bp CACAATGGCATACCGAAGGCAGTGGATGCTCCTCCCTaGAGTCTTGAGCACTGGGGTCTTGAATTTAGGAAC +
Preference number: 4 (lower is better)
Translates to: HNGIPKAVDAPP*SLEHWGLEFRN
Trigger: GTTCCTAAATTCAAGACCCCAGTGCTCAAGACTCAAGGGAGGAGCATCCACTGCCTTCGGTATGCCATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp CTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCAGAGGTCAGCAGGGTTaGTGGGCAGGATTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LHTLSPCSSQVTPRHRLGRGQQG*WAGFHH
Trigger: ATGATGAAATCCTGCCCAGCAACCCTGCTGACCTCT...GCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCATCAGTCTGTTGTGAGATCTaGATGGCTTTCCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HIVTLFFSGDTQTQIRPSVCCEI*MAFRSS
Trigger: ACTGCTGCGGAAAGCCATCCAGATCTCACAACAGAC...TGATGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp ACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCAGTCTGTTGTGAGATCTaGATGGCTTTCCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: THIVTLFFSGDTQTQIRPVCCEI*MAFRSS
Trigger: ACTGCTGCGGAAAGCCATCCAGATCTCACAACAGAC...TGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCCATGTAGTGTGGAGATaGTCTGAATGCACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSAHVVWR*SECTAA
Trigger: TGCAGCAGTGCATTCAGACCATCTCCACACTACATG...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACATGTAGTGTGGAGATaGTCTGAATGCACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QMMPLHTLSPCSSQVTPRHVVWR*SECTAA
Trigger: TGCAGCAGTGCATTCAGACCATCTCCACACTACATG...TCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCTCCAGCAGGATCACTTaGAAAGACGACAGGATAGGG +
Preference number: 4 (lower is better)
Translates to: LHTLSPCSSQVTPRHRLGSSRIT*KDDRIG
Trigger: CCCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGA...GCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp ACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATCCAGCAGGATCACTTaGAAAGACGACAGGATAGGG +
Preference number: 4 (lower is better)
Translates to: TWLRKDVHEGLGASSLQSSSRIT*KDDRIG
Trigger: CCCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGA...TGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR GCA 90 bp TCCATGGGAAAGCTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATAGAGGTCAGCAGGGTTaGTGGGCAGGATTTCATCAT +
Preference number: 4 (lower is better)
Translates to: SMGKLNSCQEGTLSFRSNRGQQG*WAGFHH
Trigger: ATGATGAAATCCTGCCCAGCAACCCTGCTGACCTCT...ATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAGCTTTCCCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp AAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCTTCCAAAGCATGTAGTGTGGAGATaGTCTGAATGCACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KDVHEGLGASSLQSWLPKHVVWR*SECTAA
Trigger: TGCAGCAGTGCATTCAGACCATCTCCACACTACATG...CTTTGGAAGCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGAGAAGGCTGGCCAGGCTaGTGTTGGGTCCATTCTGAG +
Preference number: 4 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSREGWPG*CWVHSE
Trigger: CTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTC...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp GTAACAACCAGCAAAGCCCCAGGACTCATCTACCTCACTTGCTCCAAACCCCACCTGTACAGTACCTCTTaGTGTCTATTTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: VTTSKAPGLIYLTCSKPHLYSTS*CLFPSR
Trigger: ACGAGAAGGAAATAGACACCAAGAGGTACTGTACAG...GTGGGGTTTGGAGCAAGTGAGGTAGATGAGTCCTGGGGCTTTGCTGGTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTGTACAGTACCTCTTaGTGTCTATTTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELLYSTS*CLFPSR
Trigger: ACGAGAAGGAAATAGACACCAAGAGGTACTGTACAG...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CCA 90 bp CATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATAGGGCTGTGGTAAATTaGGCTTCAGCATTATCCATG +
Preference number: 4 (lower is better)
Translates to: HGSERMSMKVLELRPFSHRAVVN*ASALSM
Trigger: CATGGATAATGCTGAAGCCCAATTTACCACAGCCCT...ATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CCA 90 bp TGGAACAGGTGCAATTGGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACTAAACTGTACAGCTCTTaGTGTCTATTTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: WNRCNWLSPSEADDGFSTKLYSS*CLFPSR
Trigger: ACGAGAAGGAAATAGACACCAAGAGCTGTACAGTTT...AGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050561.13
CDS-3UTR CCA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGACTGCACAGACATGTCTaGGATCTTGCTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSRLHRHV*DLAGQL
Trigger: CAGCTGGCCAGCAAGATCCCAGACATGTCTGTGCAG...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp TGGAGGACCACTCAGATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGAACATCTTCAAACTGTaGGATTTGAGAGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: WRTTQIKSLTSRSSEVPENIFKL*DLRGGK
Trigger: CTTGCCTCCTCTCAAATCCCACAGTTTGAAGATGTT...CTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAGTGGTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp ATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGGACACTGGAACAGCTACTACCTCTTaGTGTCTATTTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: IKSLTSRSSEVPECRDTGTATTS*CLFPSR
Trigger: ACGAGAAGGAAATAGACACCAAGAGGTAGTAGCTGT...TCCAGTGTCCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR TCA 90 bp TTTATATGGATTTCACCTGCAGTCAAGAGTCAACTAACCCATGGAAAAGCAAAGACGGCCTGCAGGCAATaGACGCACAAGCGGATCTTG +
Preference number: 4 (lower is better)
Translates to: FIWISPAVKSQLTHGKAKTACRQ*THKRIL
Trigger: CAAGATCCGCTTGTGCGTTCATTGCCTGCAGGCCGT...CTTTGCTTTTCCATGGGTTAGTTGACTCTTGACTGCAGGTGAAATCCATATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp TATGAAAACAAACCAACCCTCTCAATAGATGACATGCCTTCCTTCACTCAGAGTTGCAACTGGGCAGCATaGTTGGAGAAGAGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: YENKPTLSIDDMPSFTQSCNWAA*LEKSLG
Trigger: CCCTAGGCTCTTCTCCAACCATGCTGCCCAGTTGCA...ACTCTGAGTGAAGGAAGGCATGTCATCTATTGAGAGGGTTGGTTTGTTTTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp AGCACAAGGGCTGGACCAGGCTCTCCTTTACTGGGTTATTCATATTTCACTGTGAGGGCTGTGGTAAATTaGGCTTCAGCATTATCCATG +
Preference number: 4 (lower is better)
Translates to: STRAGPGSPLLGYSYFTVRAVVN*ASALSM
Trigger: CATGGATAATGCTGAAGCCCAATTTACCACAGCCCT...CACAGTGAAATATGAATAACCCAGTAAAGGAGAGCCTGGTCCAGCCCTTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp TATGAAAACAAACCAACCCTCTCAATAGATGACATGCCTTCCTTCACTCAGAGTTGGATGGGGTTGCCCTaGCAGTTCTCTACAATCTGC +
Preference number: 4 (lower is better)
Translates to: YENKPTLSIDDMPSFTQSWMGLP*QFSTIC
Trigger: GCAGATTGTAGAGAACTGGCAGGGCAACCCCATCCA...ACTCTGAGTGAAGGAAGGCATGTCATCTATTGAGAGGGTTGGTTTGTTTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp TATGAAAACAAACCAACCCTCTCAATAGATGACATGCCTTCCTTCACTCAGAGTGTTCTGGTGCATCTGTaGGGCTTCATGGGCATCCAT +
Preference number: 4 (lower is better)
Translates to: YENKPTLSIDDMPSFTQSVLVHL*GFMGIH
Trigger: ATGGATGCCCATGAAGCCGCACAGATGCACCAGAAC...ACTCTGAGTGAAGGAAGGCATGTCATCTATTGAGAGGGTTGGTTTGTTTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CCA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGAGTTGTGAGATCTGGATaGCTTTCCGCAGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSRVVRSG*LSAAVV
Trigger: AACCACTGCTGCGGAAAGCCATCCAGATCTCACAAC...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR GCA 90 bp TATGAAAACAAACCAACCCTCTCAATAGATGACATGCCTTCCTTCACTCAGAGTCAGTTCTCTACAATCTaGCCACACAGTGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: YENKPTLSIDDMPSFTQSQFSTI*PHSVSS
Trigger: ACTGCTCACACTGTGTGGGCAGATTGTAGAGAACTG...ACTCTGAGTGAAGGAAGGCATGTCATCTATTGAGAGGGTTGGTTTGTTTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS GCA 90 bp GAAACCCAGGAGAGCCAGATACCACGACTCGGCTGCCTCGGCCTGTaGGGCCTGTGCGGCGGCAGCCTGAGCTGCAGCCGCCGCCTGCGC +
Preference number: 5 (lower is better)
Translates to: ETQESQIPRLGCLGL*GLCGGSLSCSRRLR
Trigger: GCGCAGGCGGCGGCTGCAGCTCAGGCTGCCGCCGCACAGGCCGCACAGGCCGAGGCAGCCGAGTCGTGGTATCTGGCTCTCCTGGGTTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS GCA 90 bp ACTGTGGGATTTGAGAGGAGGCAAGCACCGCCTTCTCCAGGTGGCTaGGCGCCTGCTCGCTGTTCTTCGTGTGGTGGTAAAGCACCGAGC +
Preference number: 5 (lower is better)
Translates to: TVGFERRQAPPSPGG*APARCSSCGGKAPS
Trigger: GCTCGGTGCTTTACCACCACACGAAGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGGTGCTTGCCTCCTCTCAAATCCCACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168013.3
CDS CCA 90 bp CAAGTTGCGGACACAGGCCTCACAGAAGGCTGGCCAGGCTGGTGTTaGGTCCATTCTGAGCTTGGAACTGCACAGGGGGTGGGCCATCGT +
Preference number: 5 (lower is better)
Translates to: QVADTGLTEGWPGWC*VHSELGTAQGVGHR
Trigger: ACGATGGCCCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTCTGTGAGGCCTGTGTCCGCAACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212308.2
CDS-3UTR CAA 90 bp GCCATTACTCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCGGGTCCATTCTGAGCTaGGAACTGCACAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: AITLPSACPGLEATLCSCGSILS*ELHRGW
Trigger: CCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCC...GCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGAGTAATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS CCA 90 bp TGGGCAGCATGGTTGGAGAAGAGCCTAGGGGACTGCTGGCATAGCTaGCAGACCTGGGAGATCTCCTGTAGTGCAGTGGCCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: WAAWLEKSLGDCWHS*QTWEISCSAVALWP
Trigger: AGGCCACAAGGCCACTGCACTACAGGAGATCTCCCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTTCTCCAACCATGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 90 bp GTGTGCAACTGGGCAGCATGGTTGGAGAAGAGCCTAGGGGACTGCTaGCATAGCTGGCAGACCTGGGAGATCTCCTGTAGTGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: VCNWAAWLEKSLGDC*HSWQTWEISCSAVA
Trigger: GGCCACTGCACTACAGGAGATCTCCCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTTCTCCAACCATGCTGCCCAGTTGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp AGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGTGTAGTGCAGTGGCCTaGTGGCCTGTGACAAGCCGG +
Preference number: 5 (lower is better)
Translates to: RRVGSTWPWAVSATWLRKCSAVA*WPVTSR
Trigger: CCGGCTTGTCACAGGCCACAAGGCCACTGCACTACA...CTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCACTTAGGTCACAACTCCTGGTGGTaGGTGAGCCGAAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SPLSLPWVGGHFVQLHLGHNSWW*VSRRAV
Trigger: CACAGCCCTTCGGCTCACCAACCACCAGGAGTTGTG...ACCTAAGTGCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS TCA 90 bp TGGAGATGGTCTGAATGCACTGCTGCAGCTGCTTCAGGCACGGCTTaGCGCTCTTCACCTGCCCAGCATCCAGGTAGTGGGTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: WRWSECTAAAASGTA*RSSPAQHPGSGSPA
Trigger: TGCAGGTGACCCACTACCTGGATGCTGGGCAGGTGAAGAGCGTCAAGCCGTGCCTGAAGCAGCTGCAGCAGTGCATTCAGACCATCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCACTTAGGTGGCACCCTGGTGGTTTaGTTCCCAGAGAGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SPLSLPWVGGHFVQLHLGGTLVV*FPESSS
Trigger: ACTGGAGCTCTCTGGGAACAAAACCACCAGGGTGCC...ACCTAAGTGCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212308.2
CDS GCA 90 bp ACTGTGGGATTTGCTGTGATATCAACCACGCCTTCTCCAGGTGGCTaGGCGCCTGCTCGCTGTTCTTCGTGTGGTGGTAAAGCACCGAGC +
Preference number: 5 (lower is better)
Translates to: TVGFAVISTTPSPGG*APARCSSCGGKAPS
Trigger: GCTCGGTGCTTTACCACCACACGAAGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGTGGTTGATATCACAGCAAATCCCACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS GCA 90 bp AGTGTGTGCAACTGGGCAGCATGGTTGGAGAAGAGCCTAGGGGACTaGTGGCATAGCTGGCAGACCTGGGAGATCTCCTGTAGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SVCNWAAWLEKSLGD*WHSWQTWEISCSAV
Trigger: CACTGCACTACAGGAGATCTCCCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTTCTCCAACCATGCTGCCCAGTTGCACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 90 bp GCCATCGTAATGAGGTTGTGCTCTGGGAGGCTACAGGCCTCGATGTaGTCCTGCAGCAGCTGCTGTGAGAAGTTCTGGTGCATCTGTGCG +
Preference number: 5 (lower is better)
Translates to: AIVMRLCSGRLQASM*SCSSCCEKFWCICA
Trigger: CGCACAGATGCACCAGAACTTCTCACAGCAGCTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATTACGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212308.2
CDS-3UTR CAA 90 bp TCTCCCCTCAGCTTGCCCTGGGTTGGAGGCCACTTTGTGCAGCTGCACTTAGGTTCCTTCTGGATGGGGTaGCCCTGCCAGTTCTCTACA +
Preference number: 5 (lower is better)
Translates to: SPLSLPWVGGHFVQLHLGSFWMG*PCQFST
Trigger: TGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGGA...ACCTAAGTGCAGCTGCACAAAGTGGCCTCCAACCCAGGGCAAGCTGAGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TGGGACTTCTGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCTGCTTCAGGCACGGCTaGACGCTCTTCACCTGCCCA +
Preference number: 5 (lower is better)
Translates to: WDFCLMLRLGQDVLLNMSCFRHG*TLFTCP
Trigger: TGGGCAGGTGAAGAGCGTCAAGCCGTGCCTGAAGCA...GCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCAGAAGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp ATGCAGGTATTGAGGGTAGGTCCCTGGGACCCAAGGGCTAGAGGAAGACAGAAGTGCTTCAGGCACGGCTaGACGCTCTTCACCTGCCCA +
Preference number: 5 (lower is better)
Translates to: MQVLRVGPWDPRARGRQKCFRHG*TLFTCP
Trigger: TGGGCAGGTGAAGAGCGTCAAGCCGTGCCTGAAGCA...CTTCTGTCTTCCTCTAGCCCTTGGGTCCCAGGGACCTACCCTCAATACCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS TCA 90 bp GGATGGGGTTGCCCTGCCAGTTCTCTACAATCTGCCCACACAGTGTaGGCAGTGGGTGCACCTCTTGCAGTTTGCGCTCCATCAACAGCA +
Preference number: 5 (lower is better)
Translates to: GWGCPASSLQSAHTV*AVGAPLAVCAPSTA
Trigger: TGCTGTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGATTGTAGAGAACTGGCAGGGCAACCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS GCA 90 bp AGTGACTCCTTCTGGATGGGGTTGCCCTGCCAGTTCTCTACAATCTaGCCACACAGTGTGAGCAGTGGGTGCACCTCTTGCAGTTTGCGC +
Preference number: 5 (lower is better)
Translates to: SDSFWMGLPCQFSTI*PHSVSSGCTSCSLR
Trigger: GCGCAAACTGCAAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGATTGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGGAGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 90 bp CATAGCTGGCAGACCTGGGAGATCTCCTGTAGTGCAGTGGCCTTGTaGCCTGTGACAAGCCGGCACATGATGATATGCTCCAGCAGGATC +
Preference number: 5 (lower is better)
Translates to: HSWQTWEISCSAVAL*PVTSRHMMICSSRI
Trigger: GATCCTGCTGGAGCATATCATCATGTGCCGGCTTGTCACAGGCCACAAGGCCACTGCACTACAGGAGATCTCCCAGGTCTGCCAGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp ACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACCACTCAGAACAGCAGCATCCCCTaGCTGAGCAGGAATAATGCC +
Preference number: 5 (lower is better)
Translates to: TPLPKLLPCTGSPWRTTQNSSIP*LSRNNA
Trigger: GGCATTATTCCTGCTCAGCAAGGGGATGCTGCTGTT...CTGAGTGGTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TGGAACAGGTGCAATTGGCTGTCACCCTCAGAGGCAGATGATGGCTTCAGCACTTGCTTCAGGCACGGCTaGACGCTCTTCACCTGCCCA +
Preference number: 5 (lower is better)
Translates to: WNRCNWLSPSEADDGFSTCFRHG*TLFTCP
Trigger: TGGGCAGGTGAAGAGCGTCAAGCCGTGCCTGAAGCA...AGTGCTGAAGCCATCATCTGCCTCTGAGGGTGACAGCCAATTGCACCTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp GGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCTCCAGCAGGATCACTaGGAAAGACGACAGGATAGG +
Preference number: 5 (lower is better)
Translates to: GWEHLAMGSLCHMAQKGCLQQDH*ERRQDR
Trigger: CCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGAG...ACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTTGTAGTGCAGTGGCCTaGTGGCCTGTGACAAGCCGG +
Preference number: 5 (lower is better)
Translates to: WPWAVSATWLRKDVHEGLCSAVA*WPVTSR
Trigger: CCGGCTTGTCACAGGCCACAAGGCCACTGCACTACA...AAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp CGTATGTACACCTCTTCCCAAACTCCTCCCCTGCACTGGGTCACCTTGGAGGACTACACACTCGCAAGGTaGGTCACGATGAAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: RMYTSSQTPPLHWVTLEDYTLAR*VTMKAH
Trigger: GTGGGCCTTCATCGTGACCAACCTTGCGAGTGTGTA...GTCCTCCAAGGTGACCCAGTGCAGGGGAGGAGTTTGGGAAGAGGTGTACATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS GCA 90 bp TTCTCTACAATCTGCCCACACAGTGTGAGCAGTGGGTGCACCTCTTaGAGTTTGCGCTCCATCAACAGCAGCATCCCCTTGCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: FSTICPHSVSSGCTS*SLRSINSSIPLLSR
Trigger: CCTGCTCAGCAAGGGGATGCTGCTGTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGATTGTAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS GCA 90 bp AGTGCAGTGGCCTTGTGGCCTGTGACAAGCCGGCACATGATGATATaGTCCAGCAGGATCACTTGGAAAGACGACAGGATAGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SAVALWPVTSRHMMI*SSRITWKDDRIGLQ
Trigger: CTGCAGCCCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGAGCATATCATCATGTGCCGGCTTGTCACAGGCCACAAGGCCACTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 90 bp TGGGTCACCTGCAGCACCAGGAAGAAGACACGTAGTGACTCCTTCTaGATGGGGTTGCCCTGCCAGTTCTCTACAATCTGCCCACACAGT +
Preference number: 5 (lower is better)
Translates to: WVTCSTRKKTRSDSF*MGLPCQFSTICPHS
Trigger: ACTGTGTGGGCAGATTGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGGAGTCACTACGTGTCTTCTTCCTGGTGCTGCAGGTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 90 bp ATGCAGTTCACGGAGACACAATACAGGCCCAACAGTGTGTGCAACTaGGCAGCATGGTTGGAGAAGAGCCTAGGGGACTGCTGGCATAGC +
Preference number: 5 (lower is better)
Translates to: MQFTETQYRPNSVCN*AAWLEKSLGDCWHS
Trigger: GCTATGCCAGCAGTCCCCTAGGCTCTTCTCCAACCATGCTGCCCAGTTGCACACACTGTTGGGCCTGTATTGTGTCTCCGTGAACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTCCAGTGTGTGCAGTaGAGCGAGCTGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELLQCVQ*SELEEQ
Trigger: CTGCTCTTCCAGCTCGCTCAACTGCACACACTGGAG...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp GCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTTGCTTCAGGCACGGCTaGACGCTCTTCACCTGCCCA +
Preference number: 5 (lower is better)
Translates to: APTHIVTLFFSGDTQTQICFRHG*TLFTCP
Trigger: TGGGCAGGTGAAGAGCGTCAAGCCGTGCCTGAAGCA...AATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp CAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAACTCCTGGTGGTaGGTGAGCCGAAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: QMMPLHTLSPCSSQVTPRHNSWW*VSRRAV
Trigger: CACAGCCCTTCGGCTCACCAACCACCAGGAGTTGTG...TCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp CTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATGGGACTTCTGCCCACAACTCCTGGTGGTaGGTGAGCCGAAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LNSCQEGTLSFRSNGTSAHNSWW*VSRRAV
Trigger: CACAGCCCTTCGGCTCACCAACCACCAGGAGTTGTG...GGCAGAAGTCCCATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp GGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCGACATGTCTGGGATCTaGCTGGCCAGCTGCATGGCA +
Preference number: 5 (lower is better)
Translates to: GSERMSMKVLELRPFSHGDMSGI*LASCMA
Trigger: TGCCATGCAGCTGGCCAGCAAGATCCCAGACATGTC...GCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CAA 90 bp CTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTTGGGTCCATTCTGAGCTaGGAACTGCACAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: LMLRLGQDVLLNMSKELLGSILS*ELHRGW
Trigger: CCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCC...AAGAAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CAA 90 bp TGGAGGACCACTCAGATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGGGGTCCATTCTGAGCTaGGAACTGCACAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: WRTTQIKSLTSRSSEVPEGSILS*ELHRGW
Trigger: CCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCC...CTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAGTGGTCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CAA 90 bp TGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTCAGTGGGTGCACCTCTaGCAGTTTGCGCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: WPWAVSATWLRKDVHEGLQWVHL*QFALHQ
Trigger: TTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTG...AAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCTCCTTCTGGATGGGGTaGCCCTGCCAGTTCTCTACA +
Preference number: 5 (lower is better)
Translates to: LPHGSERMSMKVLELRPFSFWMG*PCQFST
Trigger: TGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGGA...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TCAGGTGACACCCAGACACAGATTAGGCCATCAGTCCCTTCAATAGATGGCACTTGTAGTGCAGTGGCCTaGTGGCCTGTGACAAGCCGG +
Preference number: 5 (lower is better)
Translates to: SGDTQTQIRPSVPSIDGTCSAVA*WPVTSR
Trigger: CCGGCTTGTCACAGGCCACAAGGCCACTGCACTACA...AGTGCCATCTATTGAAGGGACTGATGGCCTAATCTGTGTCTGGGTGTCACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp ACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCACACAACTCCTGGTGGTaGGTGAGCCGAAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: THIVTLFFSGDTQTQIRPHNSWW*VSRRAV
Trigger: CACAGCCCTTCGGCTCACCAACCACCAGGAGTTGTG...TGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp CTGGAAGAACAGCAGACCGAGGAAAGTGAGAGCCATTACTCTCCCCTCAGCTTGTACACACTCGCAAGGTaGGTCACGATGAAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: LEEQQTEESESHYSPLSLYTLAR*VTMKAH
Trigger: GTGGGCCTTCATCGTGACCAACCTTGCGAGTGTGTA...CAAGCTGAGGGGAGAGTAATGGCTCTCACTTTCCTCGGTCTGCTGTTCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS TCA 90 bp GCACCTCTTGCAGTTTGCGCTCCATCAACAGCAGCATCCCCTTGCTaGGCAGGAATAATGCCCTTGTATATTCAGATCCCACCACTCGGG +
Preference number: 5 (lower is better)
Translates to: APLAVCAPSTAASPC*AGIMPLYIQIPPLG
Trigger: CCCGAGTGGTGGGATCTGAATATACAAGGGCATTATTCCTGCTCAGCAAGGGGATGCTGCTGTTGATGGAGCGCAAACTGCAAGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 90 bp TACACACTCGCAAGGTTGGTCACGATGAAGGCCCACAACTCCTGGTaGTTGGTGAGCCGAAGGGCTGTGGTAAATTGGGCTTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: YTLARLVTMKAHNSW*LVSRRAVVNWASAL
Trigger: TAATGCTGAAGCCCAATTTACCACAGCCCTTCGGCTCACCAACCACCAGGAGTTGTGGGCCTTCATCGTGACCAACCTTGCGAGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 90 bp ATATACACACTCGCAAGGTTGGTCACGATGAAGGCCCACAACTCCTaGTGGTTGGTGAGCCGAAGGGCTGTGGTAAATTGGGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: IYTLARLVTMKAHNS*WLVSRRAVVNWASA
Trigger: TGCTGAAGCCCAATTTACCACAGCCCTTCGGCTCACCAACCACCAGGAGTTGTGGGCCTTCATCGTGACCAACCTTGCGAGTGTGTATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp AAACAAGTGGCTGAAGAGATGGCATGGTGGAGTGCTACCTACGGTCTCAGAAACCTCCAGTGTGTGCAGTaGAGCGAGCTGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: KQVAEEMAWWSATYGLRNLQCVQ*SELEEQ
Trigger: CTGCTCTTCCAGCTCGCTCAACTGCACACACTGGAG...GTTTCTGAGACCGTAGGTAGCACTCCACCATGCCATCTCTTCAGCCACTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CAA 90 bp CACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCATCACTCCAGTGTGTGCAGTaGAGCGAGCTGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: HIVTLFFSGDTQTQIRPSLQCVQ*SELEEQ
Trigger: CTGCTCTTCCAGCTCGCTCAACTGCACACACTGGAG...TGATGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp GCAGTGGATGCTCCTCCCTTGAGTCTTGAGCACTGGGGTCTTGAATTTAGGAACTCCTTCTGGATGGGGTaGCCCTGCCAGTTCTCTACA +
Preference number: 5 (lower is better)
Translates to: AVDAPPLSLEHWGLEFRNSFWMG*PCQFST
Trigger: TGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGGA...GTTCCTAAATTCAAGACCCCAGTGCTCAAGACTCAAGGGAGGAGCATCCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CAA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAACTGCATGAGCGCCTaGTCTGTGTACTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LPHGSERMSMKVLELRPFNCMSA*SVYFCA
Trigger: GGCACAGAAGTACACAGACAAGGCGCTCATGCAGTT...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp CTGCCACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCCTCCAGCAGGATCACTaGGAAAGACGACAGGATAGG +
Preference number: 5 (lower is better)
Translates to: LPHGSERMSMKVLELRPFLQQDH*ERRQDR
Trigger: CCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGAG...GAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TGCCTGATGCTTAGGCTGGGCCAAGACGTGCTGCTGAATATGAGCAAGGAGCTTCTCCAGCAGGATCACTaGGAAAGACGACAGGATAGG +
Preference number: 5 (lower is better)
Translates to: CLMLRLGQDVLLNMSKELLQQDH*ERRQDR
Trigger: CCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGAG...AAGCTCCTTGCTCATATTCAGCAGCACGTCTTGGCCCAGCCTAAGCATCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp AGAAGGGTTGGGAGCACCTGGCCATGGGCAGTCTCTGCCACATGGCTCAGAAAGCAAACTGTACAGCTCTaGGTGTCTATTTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: RRVGSTWPWAVSATWLRKQTVQL*VSISFS
Trigger: CGAGAAGGAAATAGACACCAAGAGCTGTACAGTTTG...CTTTCTGAGCCATGTGGCAGAGACTGCCCATGGCCAGGTGCTCCCAACCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050561.13
CDS-3UTR CAA 90 bp AGCACTCAGATGATGCCCCTACACACATTGTCACCCTGTTCTTCTCAGGTGACAGACATGTCTGGGATCTaGCTGGCCAGCTGCATGGCA +
Preference number: 5 (lower is better)
Translates to: STQMMPLHTLSPCSSQVTDMSGI*LASCMA
Trigger: TGCCATGCAGCTGGCCAGCAAGATCCCAGACATGTC...TGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAGGGGCATCATCTGAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CAA 90 bp AAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCTTCCAAAGGACATGTCTGGGATCTaGCTGGCCAGCTGCATGGCA +
Preference number: 5 (lower is better)
Translates to: KDVHEGLGASSLQSWLPKDMSGI*LASCMA
Trigger: TGCCATGCAGCTGGCCAGCAAGATCCCAGACATGTC...CTTTGGAAGCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS CCA 90 bp CCTGTGACAAGCCGGCACATGATGATATGCTCCAGCAGGATCACTTaGAAAGACGACAGGATAGGGCTGCAGTCCAGCATCTTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: PVTSRHMMICSSRIT*KDDRIGLQSSILSF
Trigger: GAAGCTTAAGATGCTGGACTGCAGCCCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGAGCATATCATCATGTGCCGGCTTGTCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp CACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCATCACAGTGGGTGCACCTCTaGCAGTTTGCGCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: HIVTLFFSGDTQTQIRPSQWVHL*QFALHQ
Trigger: TTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTG...TGATGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp AAGACTGGGGGAATAGTGGTCCTAAAGGGAGAGACCAGCAAACAGACTTCTCACCAGTGGGTGCACCTCTaGCAGTTTGCGCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: KTGGIVVLKGETSKQTSHQWVHL*QFALHQ
Trigger: TTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTG...GTGAGAAGTCTGTTTGCTGGTCTCTCCCTTTAGGACCACTATTCCCCCAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CAA 90 bp TCAGGTGACACCCAGACACAGATTAGGCCATCAGTCCCTTCAATAGATGGCACTCAGTGGGTGCACCTCTaGCAGTTTGCGCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: SGDTQTQIRPSVPSIDGTQWVHL*QFALHQ
Trigger: TTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTG...AGTGCCATCTATTGAAGGGACTGATGGCCTAATCTGTGTCTGGGTGTCACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TGGAGGACCACTCAGATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGAACTGCATGAGCGCCTaGTCTGTGTACTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: WRTTQIKSLTSRSSEVPENCMSA*SVYFCA
Trigger: GGCACAGAAGTACACAGACAAGGCGCTCATGCAGTT...CTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAATCTGAGTGGTCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp CACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCCATCATACACACTCGCAAGGTaGGTCACGATGAAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: HIVTLFFSGDTQTQIRPSYTLAR*VTMKAH
Trigger: GTGGGCCTTCATCGTGACCAACCTTGCGAGTGTGTA...TGATGGCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS GCA 90 bp CTTAAGCTTCTCCAACTGCATGAGCGCCTTGTCTGTGTACTTCTGTaGCTTCTCCAGGTAACCAGCCTGCATCGAATGCATCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: LKLLQLHERLVCVLL*LLQVTSLHRMHHCD
Trigger: GTCACAGTGATGCATTCGATGCAGGCTGGTTACCTGGAGAAGGCACAGAAGTACACAGACAAGGCGCTCATGCAGTTGGAGAAGCTTAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp CACCATGTTGTTACTCTCCCTGTGATTTCCCAACACATAGAAGATGTGACCCAGCTCCAGTGTGTGCAGTaGAGCGAGCTGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: HHVVTLPVISQHIEDVTQLQCVQ*SELEEQ
Trigger: CTGCTCTTCCAGCTCGCTCAACTGCACACACTGGAG...CTGGGTCACATCTTCTATGTGTTGGGAAATCACAGGGAGAGTAACAACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp AAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATGGCTTCCAAAGAACTGCATGAGCGCCTaGTCTGTGTACTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: KDVHEGLGASSLQSWLPKNCMSA*SVYFCA
Trigger: GGCACAGAAGTACACAGACAAGGCGCTCATGCAGTT...CTTTGGAAGCCATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp CATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATAACTGCATGAGCGCCTaGTCTGTGTACTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: HGSERMSMKVLELRPFSHNCMSA*SVYFCA
Trigger: GGCACAGAAGTACACAGACAAGGCGCTCATGCAGTT...ATGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TCAGGTGACACCCAGACACAGATTAGGCCATCAGTCCCTTCAATAGATGGCACTTTCAAACTGTGGGATTaGAGAGGAGGCAAGCACCGC +
Preference number: 5 (lower is better)
Translates to: SGDTQTQIRPSVPSIDGTFKLWD*RGGKHR
Trigger: GCGGTGCTTGCCTCCTCTCAAATCCCACAGTTTGAA...AGTGCCATCTATTGAAGGGACTGATGGCCTAATCTGTGTCTGGGTGTCACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168013.3
CDS-3UTR CAA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGATGTAGTGCAGTGGCCTaGTGGCCTGTGACAAGCCGG +
Preference number: 5 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSRCSAVA*WPVTSR
Trigger: CCGGCTTGTCACAGGCCACAAGGCCACTGCACTACA...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CAA 90 bp ATTAAGAGTCTGACTTCCAGGTCCTCAGAAGTCCCTGAGTGCAGGGACACTGGATCAGGTCCTCTGCATTaGACATCTTCAGAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: IKSLTSRSSEVPECRDTGSGPLH*TSSEFL
Trigger: GAGAAACTCTGAAGATGTCAAATGCAGAGGACCTGA...TCCAGTGTCCCTGCACTCAGGGACTTCTGAGGACCTGGAAGTCAGACTCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CAA 90 bp GTGATTTCCCAACACATAGAAGATGTGACCCAGCAGCACAAGGGAGCAGGCTGTTACAGCTACTACCTCTaGGTGTCTATTTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: VISQHIEDVTQQHKGAGCYSYYL*VSISFS
Trigger: CGAGAAGGAAATAGACACCAAGAGGTAGTAGCTGTA...ACAGCCTGCTCCCTTGTGCTGCTGGGTCACATCTTCTATGTGTTGGGAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp ACATGGCTCAGAAAGGATGTCCATGAAGGTCTTGGAGCTTCGTCCCTTCAGTCATCAGGTCCTCTGCATTaGACATCTTCAGAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: TWLRKDVHEGLGASSLQSSGPLH*TSSEFL
Trigger: GAGAAACTCTGAAGATGTCAAATGCAGAGGACCTGA...TGACTGAAGGGACGAAGCTCCAAGACCTTCATGGACATCCTTTCTGAGCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CAA 90 bp TCAGGTGACACCCAGACACAGATTAGGCCATCAGTCCCTTCAATAGATGGCACTTCAGGTCCTCTGCATTaGACATCTTCAGAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: SGDTQTQIRPSVPSIDGTSGPLH*TSSEFL
Trigger: GAGAAACTCTGAAGATGTCAAATGCAGAGGACCTGA...AGTGCCATCTATTGAAGGGACTGATGGCCTAATCTGTGTCTGGGTGTCACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CAA 90 bp CTACACACATTGTCACCCTGTTCTTCTCAGGTGACACCCAGACACAGATTAGGCACTGTACAGTACCTCTaGGTGTCTATTTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: LHTLSPCSSQVTPRHRLGTVQYL*VSISFS
Trigger: CGAGAAGGAAATAGACACCAAGAGGTACTGTACAGT...GCCTAATCTGTGTCTGGGTGTCACCTGAGAAGAACAGGGTGACAATGTGTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS-3UTR CAA 90 bp CTTCAAGTTGACAAAGGAAGGAGTGGACTCTACCTGAAATCTAGCTTAAGCAGACTCCAGCAGGATCACTaGGAAAGACGACAGGATAGG +
Preference number: 5 (lower is better)
Translates to: LQVDKGRSGLYLKSSLSRLQQDH*ERRQDR
Trigger: CCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGAG...TCTGCTTAAGCTAGATTTCAGGTAGAGTCCACTCCTTCCTTTGTCAACTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS-3UTR CAA 90 bp TCCATGGGAAAGCTAAATAGCTGCCAGGAAGGAACCCTCTCATTCAGGTCCAATACTGTACAGTACCTCTaGGTGTCTATTTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: SMGKLNSCQEGTLSFRSNTVQYL*VSISFS
Trigger: CGAGAAGGAAATAGACACCAAGAGGTACTGTACAGT...ATTGGACCTGAATGAGAGGGTTCCTTCCTGGCAGCTATTTAGCTTTCCCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168013.3
ENSMUST00000212308.2
CDS TCA 90 bp CAGTGGTTTTGCTGCATCCACGGAGTTCTCTTGACAATACAGCTCTaGCAACAGGCTTGCTGCCTCAAATTTAACATCTTCAAACTGTGG +
Preference number: 5 (lower is better)
Translates to: QWFCCIHGVLLTIQL*QQACCLKFNIFKLW
Trigger: CCACAGTTTGAAGATGTTAAATTTGAGGCAGCAAGCCTGTTGTCAGAGCTGTATTGTCAAGAGAACTCCGTGGATGCAGCAAAACCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS-3UTR CAA 90 bp TTTATATGGATTTCACCTGCAGTCAAGAGTCAACTAACCCATGGAAAAGCAAAGTACACACTCGCAAGGTaGGTCACGATGAAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: FIWISPAVKSQLTHGKAKYTLAR*VTMKAH
Trigger: GTGGGCCTTCATCGTGACCAACCTTGCGAGTGTGTA...CTTTGCTTTTCCATGGGTTAGTTGACTCTTGACTGCAGGTGAAATCCATATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
CDS GCA 72 bp GAGAGCCAGATACCACGACTCGGCTGCCTCGGCCTGTaGGGCCTGTGCGGCGGCAGCCTGAGCTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: ESQIPRLGCLGL*GLCGGSLSCSR
Trigger: GCGGCTGCAGCTCAGGCTGCCGCCGCACAGGCCGCACAGGCCGAGGCAGCCGAGTCGTGGTATCTGGCTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS TCA 72 bp GAGCCGAGCTGCAGGTGCGTCCGGGCCTCGATCCGCTaGGGCGGCTTGAAGGGGAACACGGCCTGCAGGCAA +
Preference number: 6 (lower is better)
Translates to: EPSCRCVRASIR*GGLKGNTACRQ
Trigger: TTGCCTGCAGGCCGTGTTCCCCTTCAAGCCGCCTCAGCGGATCGAGGCCCGGACGCACCTGCAGCTCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp GCACAGGGGGTGGGCCATCGTAATGAGGTTGTGCTCTaGGAGGCTACAGGCCTCGATGTGGTCCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: AQGVGHRNEVVL*EATGLDVVLQQ
Trigger: CTGCTGCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATTACGATGGCCCACCCCCTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212308.2
CDS GCA 72 bp GAACTGCACAGGGGGTGGGCCATCGTAATGAGGTTGTaGTCTGGGAGGCTACAGGCCTCGATGTGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: ELHRGWAIVMRL*SGRLQASMWSC
Trigger: GCAGGACCACATCGAGGCCTGTAGCCTCCCAGAGCACAACCTCATTACGATGGCCCACCCCCTGTGCAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212308.2
CDS GCA 72 bp CACAAGCGGATCTTGGGCGGGCTAGATGTTCGGAAGTaGTCGGCGAAACCCAGGAGAGCCAGATACCACGAC +
Preference number: 6 (lower is better)
Translates to: HKRILGGLDVRK*SAKPRRARYHD
Trigger: GTCGTGGTATCTGGCTCTCCTGGGTTTCGCCGAGCACTTCCGAACATCTAGCCCGCCCAAGATCCGCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS GCA 72 bp TTTGAGAGGAGGCAAGCACCGCCTTCTCCAGGTGGCTaGGCGCCTGCTCGCTGTTCTTCGTGTGGTGGTAAA +
Preference number: 6 (lower is better)
Translates to: FERRQAPPSPGG*APARCSSCGGK
Trigger: TTTACCACCACACGAAGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGGTGCTTGCCTCCTCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168013.3
CDS CCA 72 bp GGGATTTGCTGTGATATCAACCACGCCTTCTCCAGGTaGCTGCGCGCCTGCTCGCTGTTCTTCGTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: GICCDINHAFSR*LRACSLFFVWW
Trigger: CCACCACACGAAGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGTGGTTGATATCACAGCAAATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp AAGAGCCTAGGGGACTGCTGGCATAGCTGGCAGACCTaGGAGATCTCCTGTAGTGCAGTGGCCTTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: KSLGDCWHSWQT*EISCSAVALWP
Trigger: AGGCCACAAGGCCACTGCACTACAGGAGATCTCCCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp TGGTTGGAGAAGAGCCTAGGGGACTGCTGGCATAGCTaGCAGACCTGGGAGATCTCCTGTAGTGCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: WLEKSLGDCWHS*QTWEISCSAVA
Trigger: GGCCACTGCACTACAGGAGATCTCCCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTTCTCCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 90 bp GCCTCACAGAAGGCTGGCCAGGCTGGTGTTGGGTCCATTCTGAGCTaGGAACTGCACAGGGGGTGGGCCATCGTAATGAGGTTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: ASQKAGQAGVGSILS*ELHRGWAIVMRLCS
Trigger: AGAGCACAACCTCATTACGATGGCCCACCCCCTGTGCAGTTCCAAGCTCAGAATGGACCCAACACCAGCCTGGCCAGCCTTCTGTGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212308.2
CDS CAA 90 bp GAGACACAATACAGGCCCAACAGTGTGTGCAACTGGGCAGCATGGTaGGAGAAGAGCCTAGGGGACTGCTGGCATAGCTGGCAGACCTGG +
Preference number: 6 (lower is better)
Translates to: ETQYRPNSVCNWAAW*EKSLGDCWHSWQTW
Trigger: CCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTTCTCCAACCATGCTGCCCAGTTGCACACACTGTTGGGCCTGTATTGTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp TGGGCAGCATGGTTGGAGAAGAGCCTAGGGGACTGCTaGCATAGCTGGCAGACCTGGGAGATCTCCTGTAGT +
Preference number: 6 (lower is better)
Translates to: WAAWLEKSLGDC*HSWQTWEISCS
Trigger: ACTACAGGAGATCTCCCAGGTCTGCCAGCTATGCCAGCAGTCCCCTAGGCTCTTCTCCAACCATGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp GCTGCTCGGAGGCAGTGTGAGCTGACCGGGAAGCTGTaGTCCGGGTTTATCCTCTCAAGCAAACTGTACAGC +
Preference number: 6 (lower is better)
Translates to: AARRQCELTGKL*SGFILSSKLYS
Trigger: GCTGTACAGTTTGCTTGAGAGGATAAACCCGGACCACAGCTTCCCGGTCAGCTCACACTGCCTCCGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050561.13
CDS CAA 72 bp CCACACAGTGTGAGCAGTGGGTGCACCTCTTGCAGTTaGCGCTCCATCAACAGCAGCATCCCCTTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: PHSVSSGCTSCS*RSINSSIPLLS
Trigger: GCTCAGCAAGGGGATGCTGCTGTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTGCTCACACTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS GCA 72 bp ATCTGCCCACACAGTGTGAGCAGTGGGTGCACCTCTTaGAGTTTGCGCTCCATCAACAGCAGCATCCCCTTG +
Preference number: 6 (lower is better)
Translates to: ICPHSVSSGCTS*SLRSINSSIPL
Trigger: CAAGGGGATGCTGCTGTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS GCA 72 bp TTCTGGATGGGGTTGCCCTGCCAGTTCTCTACAATCTaGCCACACAGTGTGAGCAGTGGGTGCACCTCTTGC +
Preference number: 6 (lower is better)
Translates to: FWMGLPCQFSTI*PHSVSSGCTSC
Trigger: GCAAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGATTGTAGAGAACTGGCAGGGCAACCCCATCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp CAGACCTGGGAGATCTCCTGTAGTGCAGTGGCCTTGTaGCCTGTGACAAGCCGGCACATGATGATATGCTCC +
Preference number: 6 (lower is better)
Translates to: QTWEISCSAVAL*PVTSRHMMICS
Trigger: GGAGCATATCATCATGTGCCGGCTTGTCACAGGCCACAAGGCCACTGCACTACAGGAGATCTCCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp ACGGAGACACAATACAGGCCCAACAGTGTGTGCAACTaGGCAGCATGGTTGGAGAAGAGCCTAGGGGACTGC +
Preference number: 6 (lower is better)
Translates to: TETQYRPNSVCN*AAWLEKSLGDC
Trigger: GCAGTCCCCTAGGCTCTTCTCCAACCATGCTGCCCAGTTGCACACACTGTTGGGCCTGTATTGTGTCTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp GCAAGGTTGGTCACGATGAAGGCCCACAACTCCTGGTaGTTGGTGAGCCGAAGGGCTGTGGTAAATTGGGCT +
Preference number: 6 (lower is better)
Translates to: ARLVTMKAHNSW*LVSRRAVVNWA
Trigger: AGCCCAATTTACCACAGCCCTTCGGCTCACCAACCACCAGGAGTTGTGGGCCTTCATCGTGACCAACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp CTCGCAAGGTTGGTCACGATGAAGGCCCACAACTCCTaGTGGTTGGTGAGCCGAAGGGCTGTGGTAAATTGG +
Preference number: 6 (lower is better)
Translates to: LARLVTMKAHNS*WLVSRRAVVNW
Trigger: CCAATTTACCACAGCCCTTCGGCTCACCAACCACCAGGAGTTGTGGGCCTTCATCGTGACCAACCTTGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp GCTGCTCGGAGGCAGTGTGAGCTGACCGGGAAGCTGTaGTCCGGGTTTATCCTCTCAAGCAAACTGTACAGT +
Preference number: 6 (lower is better)
Translates to: AARRQCELTGKL*SGFILSSKLYS
Trigger: ACTGTACAGTTTGCTTGAGAGGATAAACCCGGACCACAGCTTCCCGGTCAGCTCACACTGCCTCCGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
CDS CAA 72 bp TGGCAGACCTGGGAGATCTCCTGTAGTGCAGTGGCCTaGTGGCCTGTGACAAGCCGGCACATGATGATATGC +
Preference number: 6 (lower is better)
Translates to: WQTWEISCSAVA*WPVTSRHMMIC
Trigger: GCATATCATCATGTGCCGGCTTGTCACAGGCCACAAGGCCACTGCACTACAGGAGATCTCCCAGGTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 90 bp GTTCTCTACAATCTGCCCACACAGTGTGAGCAGTGGGTGCACCTCTaGCAGTTTGCGCTCCATCAACAGCAGCATCCCCTTGCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: VLYNLPTQCEQWVHL*QFALHQQQHPLAEQ
Trigger: CTGCTCAGCAAGGGGATGCTGCTGTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGATTGTAGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS TCA 72 bp GAAGAGCAGGCGACAGTGCCAGTATGGCGTCTGTTGTaGGATCTGGATGGCTTTCCGCAGCAGTGGTTTTGC +
Preference number: 6 (lower is better)
Translates to: EEQATVPVWRLL*DLDGFPQQWFC
Trigger: GCAAAACCACTGCTGCGGAAAGCCATCCAGATCTCACAACAGACGCCATACTGGCACTGTCGCCTGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS GCA 72 bp TTTGCTGTGATATCAACCACGCCTTCTCCAGGTGGCTaGGCGCCTGCTCGCTGTTCTTCGTGTGGTGGTAAA +
Preference number: 6 (lower is better)
Translates to: FAVISTTPSPGG*APARCSSCGGK
Trigger: TTTACCACCACACGAAGAACAGCGAGCAGGCGCGCAGCCACCTGGAGAAGGCGTGGTTGATATCACAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000050561.13
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS GCA 72 bp CAGTTCACGGAGACACAATACAGGCCCAACAGTGTGTaGAACTGGGCAGCATGGTTGGAGAAGAGCCTAGGG +
Preference number: 6 (lower is better)
Translates to: QFTETQYRPNSV*NWAAWLEKSLG
Trigger: CCCTAGGCTCTTCTCCAACCATGCTGCCCAGTTGCACACACTGTTGGGCCTGTATTGTGTCTCCGTGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 72 bp AATCTGCCCACACAGTGTGAGCAGTGGGTGCACCTCTaGCAGTTTGCGCTCCATCAACAGCAGCATCCCCTT +
Preference number: 6 (lower is better)
Translates to: NLPTQCEQWVHL*QFALHQQQHPL
Trigger: AAGGGGATGCTGCTGTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 72 bp AGGTTGGTCACGATGAAGGCCCACAACTCCTGGTGGTaGGTGAGCCGAAGGGCTGTGGTAAATTGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: RLVTMKAHNSWW*VSRRAVVNWAS
Trigger: TGAAGCCCAATTTACCACAGCCCTTCGGCTCACCAACCACCAGGAGTTGTGGGCCTTCATCGTGACCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 90 bp ACACTCGCAAGGTTGGTCACGATGAAGGCCCACAACTCCTGGTGGTaGGTGAGCCGAAGGGCTGTGGTAAATTGGGCTTCAGCATTATCC +
Preference number: 6 (lower is better)
Translates to: TLARLVTMKAHNSWW*VSRRAVVNWASALS
Trigger: GGATAATGCTGAAGCCCAATTTACCACAGCCCTTCGGCTCACCAACCACCAGGAGTTGTGGGCCTTCATCGTGACCAACCTTGCGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS TCA 72 bp TCTCCAGGTAACCAGCCTGCATCGAATGCATCACTGTaGCCAGGTAGACGAGCACACACATGTGCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: SPGNQPASNASL*PGRRAHTCAPW
Trigger: CCAAGGAGCACATGTGTGTGCTCGTCTACCTGGTCACAGTGATGCATTCGATGCAGGCTGGTTACCTGGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS GCA 72 bp GGAAGAAGACACGTAGTGACTCCTTCTGGATGGGGTTaGCCTGCCAGTTCTCTACAATCTGCCCACACAGTG +
Preference number: 6 (lower is better)
Translates to: GRRHVVTPSGWG*PASSLQSAHTV
Trigger: CACTGTGTGGGCAGATTGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGGAGTCACTACGTGTCTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp TGCAGCACCAGGAAGAAGACACGTAGTGACTCCTTCTaGATGGGGTTGCCCTGCCAGTTCTCTACAATCTGC +
Preference number: 6 (lower is better)
Translates to: CSTRKKTRSDSF*MGLPCQFSTIC
Trigger: GCAGATTGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGGAGTCACTACGTGTCTTCTTCCTGGTGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp AGCCGGCACATGATGATATGCTCCAGCAGGATCACTTaGAAAGACGACAGGATAGGGCTGCAGTCCAGCATC +
Preference number: 6 (lower is better)
Translates to: SRHMMICSSRIT*KDDRIGLQSSI
Trigger: GATGCTGGACTGCAGCCCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGAGCATATCATCATGTGCCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 72 bp CTCCTGGTGGTTGGTGAGCCGAAGGGCTGTGGTAAATaGGGCTTCAGCATTATCCATGCAGTTCACGGAGAC +
Preference number: 6 (lower is better)
Translates to: LLVVGEPKGCGK*GFSIIHAVHGD
Trigger: GTCTCCGTGAACTGCATGGATAATGCTGAAGCCCAATTTACCACAGCCCTTCGGCTCACCAACCACCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 90 bp ACAATCTGCCCACACAGTGTGAGCAGTGGGTGCACCTCTTGCAGTTaGCGCTCCATCAACAGCAGCATCCCCTTGCTGAGCAGGAATAAT +
Preference number: 6 (lower is better)
Translates to: TICPHSVSSGCTSCS*RSINSSIPLLSRNN
Trigger: ATTATTCCTGCTCAGCAAGGGGATGCTGCTGTTGATGGAGCGCAAACTGCAAGAGGTGCACCCACTGCTCACACTGTGTGGGCAGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS TCA 72 bp CGCAGCAGTGGTTTTGCTGCATCCACGGAGTTCTCTTaGCAATACAGCTCTGACAACAGGCTTGCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: RSSGFAASTEFS*QYSSDNRLAAS
Trigger: TGAGGCAGCAAGCCTGTTGTCAGAGCTGTATTGTCAAGAGAACTCCGTGGATGCAGCAAAACCACTGCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp TCCTGGTGGTTGGTGAGCCGAAGGGCTGTGGTAAATTaGGCTTCAGCATTATCCATGCAGTTCACGGAGACA +
Preference number: 6 (lower is better)
Translates to: SWWLVSRRAVVN*ASALSMQFTET
Trigger: TGTCTCCGTGAACTGCATGGATAATGCTGAAGCCCAATTTACCACAGCCCTTCGGCTCACCAACCACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 72 bp AGGAAGAAGACACGTAGTGACTCCTTCTGGATGGGGTaGCCCTGCCAGTTCTCTACAATCTGCCCACACAGT +
Preference number: 6 (lower is better)
Translates to: RKKTRSDSFWMG*PCQFSTICPHS
Trigger: ACTGTGTGGGCAGATTGTAGAGAACTGGCAGGGCAACCCCATCCAGAAGGAGTCACTACGTGTCTTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 72 bp AAGCCGGCACATGATGATATGCTCCAGCAGGATCACTaGGAAAGACGACAGGATAGGGCTGCAGTCCAGCAT +
Preference number: 6 (lower is better)
Translates to: KPAHDDMLQQDH*ERRQDRAAVQH
Trigger: ATGCTGGACTGCAGCCCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGAGCATATCATCATGTGCCGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 90 bp GGGTGCACCTCTTGCAGTTTGCGCTCCATCAACAGCAGCATCCCCTaGCTGAGCAGGAATAATGCCCTTGTATATTCAGATCCCACCACT +
Preference number: 6 (lower is better)
Translates to: GCTSCSLRSINSSIP*LSRNNALVYSDPTT
Trigger: AGTGGTGGGATCTGAATATACAAGGGCATTATTCCTGCTCAGCAAGGGGATGCTGCTGTTGATGGAGCGCAAACTGCAAGAGGTGCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 90 bp GCCTGTGACAAGCCGGCACATGATGATATGCTCCAGCAGGATCACTaGGAAAGACGACAGGATAGGGCTGCAGTCCAGCATCTTAAGCTT +
Preference number: 6 (lower is better)
Translates to: ACDKPAHDDMLQQDH*ERRQDRAAVQHLKL
Trigger: AAGCTTAAGATGCTGGACTGCAGCCCTATCCTGTCGTCTTTCCAAGTGATCCTGCTGGAGCATATCATCATGTGCCGGCTTGTCACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 90 bp AGCTCTTGGTGTCTATTTCCTTCTCGTATATACACACTCGCAAGGTaGGTCACGATGAAGGCCCACAACTCCTGGTGGTTGGTGAGCCGA +
Preference number: 6 (lower is better)
Translates to: SSWCLFPSRIYTLAR*VTMKAHNSWWLVSR
Trigger: TCGGCTCACCAACCACCAGGAGTTGTGGGCCTTCATCGTGACCAACCTTGCGAGTGTGTATATACGAGAAGGAAATAGACACCAAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050561.13
CDS CAA 90 bp ACCTCTTGGTGTCTATTTCCTTCTCGTATATACACACTCGCAAGGTaGGTCACGATGAAGGCCCACAACTCCTGGTGGTTGGTGAGCCGA +
Preference number: 6 (lower is better)
Translates to: TSWCLFPSRIYTLAR*VTMKAHNSWWLVSR
Trigger: TCGGCTCACCAACCACCAGGAGTTGTGGGCCTTCATCGTGACCAACCTTGCGAGTGTGTATATACGAGAAGGAAATAGACACCAAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 90 bp ATGGCGTCTGTTGTGAGATCTGGATGGCTTTCCGCAGCAGTGGTTTaGCTGCATCCACGGAGTTCTCTTGACAATACAGCTCTGACAACA +
Preference number: 6 (lower is better)
Translates to: MASVVRSGWLSAAVV*LHPRSSLDNTALTT
Trigger: TGTTGTCAGAGCTGTATTGTCAAGAGAACTCCGTGGATGCAGCAAAACCACTGCTGCGGAAAGCCATCCAGATCTCACAACAGACGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CCA 72 bp CAGGCTTGCTGCCTCAAATTTAACATCTTCAAACTGTaGGATTTGAGAGGAGGCAAGCACCGCCTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: QACCLKFNIFKL*DLRGGKHRLLQ
Trigger: CTGGAGAAGGCGGTGCTTGCCTCCTCTCAAATCCCACAGTTTGAAGATGTTAAATTTGAGGCAGCAAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168013.3
CDS CAA 72 bp GTTGTGAGATCTGGATGGCTTTCCGCAGCAGTGGTTTaGCTGCATCCACGGAGTTCTCTTGACAATACAGCT +
Preference number: 6 (lower is better)
Translates to: VVRSGWLSAAVV*LHPRSSLDNTA
Trigger: AGCTGTATTGTCAAGAGAACTCCGTGGATGCAGCAAAACCACTGCTGCGGAAAGCCATCCAGATCTCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 72 bp TGTCTATTTCCTTCTCGTATATACACACTCGCAAGGTaGGTCACGATGAAGGCCCACAACTCCTGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: CLFPSRIYTLAR*VTMKAHNSWWL
Trigger: CAACCACCAGGAGTTGTGGGCCTTCATCGTGACCAACCTTGCGAGTGTGTATATACGAGAAGGAAATAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS CAA 72 bp TCTTGCAGTTTGCGCTCCATCAACAGCAGCATCCCCTaGCTGAGCAGGAATAATGCCCTTGTATATTCAGAT +
Preference number: 6 (lower is better)
Translates to: SCSLRSINSSIP*LSRNNALVYSD
Trigger: ATCTGAATATACAAGGGCATTATTCCTGCTCAGCAAGGGGATGCTGCTGTTGATGGAGCGCAAACTGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2
CDS TCA 72 bp TGCTGCATCCACGGAGTTCTCTTGACAATACAGCTCTaGCAACAGGCTTGCTGCCTCAAATTTAACATCTTC +
Preference number: 6 (lower is better)
Translates to: CCIHGVLLTIQL*QQACCLKFNIF
Trigger: GAAGATGTTAAATTTGAGGCAGCAAGCCTGTTGTCAGAGCTGTATTGTCAAGAGAACTCCGTGGATGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000050561.13
ENSMUST00000168013.3
ENSMUST00000212308.2
ENSMUST00000212451.2
ENSMUST00000212845.2