Pregenerated sensors for MATR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037236Ensembl transcript IDs: ENSMUST00000166793.10, ENSMUST00000235199.2, ENSMUST00000235960.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTaGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: TQGAGEMAQWVRAPD*SSEGPKFKSQQPHG Trigger: ACCATGTGGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCCTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR GCA 90 bp | CCCTATAGACCAGGAGGTTCTCTTAACTCAAGGCAAACCTGCCCCTaGCTCCCAAGTGCTGGGAATAAAGATATATGCCACCATGACTGG | + |
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Preference number: 1 (lower is better) Translates to: PYRPGGSLNSRQTCP*LPSAGNKDICHHDW Trigger: CCAGTCATGGTGGCATATATCTTTATTCCCAGCACTTGGGAGGCAGGGGCAGGTTTGCCTTGAGTTAAGAGAACCTCCTGGTCTATAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR GCA 90 bp | CTGGAACCCTATAGACCAGGAGGTTCTCTTAACTCAAGGCAAACCTaGCCCTGCCTCCCAAGTGCTGGGAATAAAGATATATGCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: LEPYRPGGSLNSRQT*PCLPSAGNKDICHH Trigger: ATGGTGGCATATATCTTTATTCCCAGCACTTGGGAGGCAGGGGCAGGTTTGCCTTGAGTTAAGAGAACCTCCTGGTCTATAGGGTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATCTaGTGCCCTCTTCTGGTGCATCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTTHNEI*CPLLVHLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAGAGGGCATCAGATCTCATTATGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR GCA 90 bp | CTCTCTTACCTTTTTGGAACTTTCAGTCACACAGGTCTACACACCTaGCTATACGACCATCACCTCGATAAAACCCGATTTCTTAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: LSYLFGTFSHTGLHT*LYDHHLDKTRFLKA Trigger: GGCTTTAAGAAATCGGGTTTTATCGAGGTGATGGTCGTATAGGCAGGTGTGTAGACCTGTGTGACTGAAAGTTCCAAAAAGGTAAGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CCA 90 bp | CCCTGCCTCCCAAGTGCTGGGAATAAAGATATATGCCACCATGACTaGCCCTATCCACAATTTATTTTAGTTGCTGTTAGATTAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: PCLPSAGNKDICHHD*PYPQFILVAVRLEK Trigger: TTTTTCTAATCTAACAGCAACTAAAATAAATTGTGGATAGGGCCAGTCATGGTGGCATATATCTTTATTCCCAGCACTTGGGAGGCAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CCA 90 bp | ACAGGTGTAAAAATAAACAATTATTTTATAGCCATGAACTACATCTaGGGAAAGCAGGCATGTGAACAGGTATACAGAAGTTTGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TGVKINNYFIAMNYI*GKQACEQVYRSLGR Trigger: CCTGCCCAAACTTCTGTATACCTGTTCACATGCCTGCTTTCCCCAGATGTAGTTCATGGCTATAAAATAATTGTTTATTTTTACACCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR CCA 90 bp | GGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCATCCCAGCACTGGGTTaGACATCTGCGAGTTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: GKSTRLLFRRSEVQIPATIPALG*TSASSR Trigger: CCTAGAACTCGCAGATGTCCAACCCAGTGCTGGGAT...GGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR GCA 90 bp | CTTTTTGGAACTTTCAGTCACACAGGTCTACACACCTGCCTATACGACCATCACAACTCAAGGCAAACCTaGCCCTGCCTCCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LFGTFSHTGLHTCLYDHHNSRQT*PCLPSA Trigger: AGCACTTGGGAGGCAGGGGCAGGTTTGCCTTGAGTT...GTGATGGTCGTATAGGCAGGTGTGTAGACCTGTGTGACTGAAAGTTCCAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR GCA 90 bp | TCTACACTGCTCAGGCTGGGTGGGGTCAGACTGAAGCTTAACTTTGTACTCTCTGTCTGCATTCCAGACTaGACTCAACTCCTTCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: STLLRLGGVRLKLNFVLSVCIPD*TQLLLL Trigger: CAACAGAAGGAGTTGAGTGCAGTCTGGAATGCAGAC...AGAGAGTACAAAGTTAAGCTTCAGTCTGACCCCACCCAGCCTGAGCAGTGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR CCA 90 bp | CGAGTTCTAGGCCAGCCTGGTCTAGAGTCAATTCCAGGACAGTTTGAGGTTATATTGAGACAAGTGGCCTaGAACCCTATAGACCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RVLGQPGLESIPGQFEVILRQVA*NPIDQE Trigger: CTCCTGGTCTATAGGGTTCCAGGCCACTTGTCTCAA...TATAACCTCAAACTGTCCTGGAATTGACTCTAGACCAGGCTGGCCTAGAACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR TCA 90 bp | TCTACACTGCTCAGGCTGGGTGGGGTCAGACTGAAGCTTAACTTTGTACTCTCTGCTACAGGATTCAAGTaGCAGGCAATAGGTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: STLLRLGGVRLKLNFVLSATGFK*QAIGSQ Trigger: TTGAGAACCTATTGCCTGTCACTTGAATCCTGTAGC...AGAGAGTACAAAGTTAAGCTTCAGTCTGACCCCACCCAGCCTGAGCAGTGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGGTTCTCTTAACTCAAGGCAAACCTGCCCCTGCCTCCCAAGTGCTGGGATCTCTAAAAATGCAATaGAACCAAAACAGCTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: QEVLLTQGKPAPASQVLGSLKMQ*NQNSFQ Trigger: TTGGAAGCTGTTTTGGTTGCATTGCATTTTTAGAGA...TCCCAGCACTTGGGAGGCAGGGGCAGGTTTGCCTTGAGTTAAGAGAACCTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CAA 90 bp | CAAGCCTTTAATTCAGTACTCGGGAGGCAGACACAGGCTTCTGCTTaGGAAGTCAGCACAGTCTACACAGTAAGTTTCAGCTACTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: QAFNSVLGRQTQASA*EVSTVYTVSFSYLV Trigger: CACTAAGTAGCTGAAACTTACTGTGTAGACTGTGCTGACTTCCAAAGCAGAAGCCTGTGTCTGCCTCCCGAGTACTGAATTAAAGGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR TCA 90 bp | CTTTTTGGAACTTTCAGTCACACAGGTCTACACACCTGCCTATACGACCATCACGTATTTGTTTGCATTTaGGACAAGTGGCCTGGAACC | + |
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Preference number: 2 (lower is better) Translates to: LFGTFSHTGLHTCLYDHHVFVCI*DKWPGT Trigger: GGTTCCAGGCCACTTGTCTCAAATGCAAACAAATAC...GTGATGGTCGTATAGGCAGGTGTGTAGACCTGTGTGACTGAAAGTTCCAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR GCA 90 bp | GTACCAGAGTGGGCTGATCTACTGCACAAAATTCACTTCTGGGATACACAAGTACTCAACTCCTTCTGTTaGCAGAGGATGGCCTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: VPEWADLLHKIHFWDTQVLNSFC*QRMALN Trigger: GTTTAAGGCCATCCTCTGGCAACAGAAGGAGTTGAG...TACTTGTGTATCCCAGAAGTGAATTTTGTGCAGTAGATCAGCCCACTCTGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR CCA 90 bp | CGAGTTCTAGGCCAGCCTGGTCTAGAGTCAATTCCAGGACAGTTTGAGGTTATAGCTCTCTTACCTTTTTaGAACTTTCAGTCACACAGG | + |
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Preference number: 2 (lower is better) Translates to: RVLGQPGLESIPGQFEVIALLPF*NFQSHR Trigger: CCTGTGTGACTGAAAGTTCCAAAAAGGTAAGAGAGC...TATAACCTCAAACTGTCCTGGAATTGACTCTAGACCAGGCTGGCCTAGAACTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CAA 90 bp | TTGGGTCTTCAGATTATTCAACACAGCAAAAATTCCTTCTTGATTTaGAAGCAGCGACAAGACGAATCTTTCCAATGCTACTTTAATTCT | + |
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Preference number: 2 (lower is better) Translates to: LGLQIIQHSKNSFLI*KQRQDESFQCYFNS Trigger: AGAATTAAAGTAGCATTGGAAAGATTCGTCTTGTCGCTGCTTCAAAATCAAGAAGGAATTTTTGCTGTGTTGAATAATCTGAAGACCCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR GCA 72 bp | GCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTaGTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: AGEMAQWVRAPD*SSEGPKFKSQQ Trigger: TTGCTGGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CCA 72 bp | GCAGTGGTAGGCATGCCTTTAATCCCAGCACTGGGTTaGACATCTGCGAGTTCTAGGCCAGCCTGGTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: AVVGMPLIPALG*TSASSRPAWSR Trigger: TCTAGACCAGGCTGGCCTAGAACTCGCAGATGTCCAACCCAGTGCTGGGATTAAAGGCATGCCTACCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR CAA 90 bp | ATGCCTTTAATCCCAGCACTGGGTTGGACATCTGCGAGTTCTAGGCCAGCCTGGCGTATTTGTTTGCATTaGAGACAAGTGGCCTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: MPLIPALGWTSASSRPAWRICLH*RQVAWN Trigger: GTTCCAGGCCACTTGTCTCAAATGCAAACAAATACG...CCAGGCTGGCCTAGAACTCGCAGATGTCCAACCCAGTGCTGGGATTAAAGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR GCA 72 bp | CCAGGAGGTTCTCTTAACTCAAGGCAAACCTGCCCCTaGCTCCCAAGTGCTGGGAATAAAGATATATGCCAC | + |
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Preference number: 3 (lower is better) Translates to: PGGSLNSRQTCP*LPSAGNKDICH Trigger: GTGGCATATATCTTTATTCCCAGCACTTGGGAGGCAGGGGCAGGTTTGCCTTGAGTTAAGAGAACCTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCACCCATAATGAGATCTaGTGCCCTCTTCTGGTGCATCTGAAGACAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTTHNEI*CPLLVHLKTAT Trigger: TGTAGCTGTCTTCAGATGCACCAGAAGAGGGCATCAGATCTCATTATGGGTGGTTGTGAGCCACCATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR TCA 72 bp | GACCATCTACACTGCTCAGGCTGGGTGGGGTCAGACTaGAGCTTAACTTTGTACTCTCTTGAGTACCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: DHLHCSGWVGSD*SLTLYSLEYQS Trigger: ACTCTGGTACTCAAGAGAGTACAAAGTTAAGCTTCAGTCTGACCCCACCCAGCCTGAGCAGTGTAGATGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR CAA 90 bp | TCTACACTGCTCAGGCTGGGTGGGGTCAGACTGAAGCTTAACTTTGTACTCTCTACTCAACTCCTTCTGTaGCCAGAGGATGGCCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: STLLRLGGVRLKLNFVLSTQLLL*PEDGLK Trigger: TTTAAGGCCATCCTCTGGCAACAGAAGGAGTTGAGT...AGAGAGTACAAAGTTAAGCTTCAGTCTGACCCCACCCAGCCTGAGCAGTGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR TCA 72 bp | ATAAAAAGGGATTATAGAATAAACTCAGGGGGCTGGTaGGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC | + |
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Preference number: 3 (lower is better) Translates to: IKRDYRINSGGW*DGSVGKSTRLL Trigger: GAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCCTGAGTTTATTCTATAATCCCTTTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR CAA 90 bp | ATGCCTTTAATCCCAGCACTGGGTTGGACATCTGCGAGTTCTAGGCCAGCCTGGAGCAAAAATTCCTTCTaGATTTTGAAGCAGCGACAA | + |
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Preference number: 3 (lower is better) Translates to: MPLIPALGWTSASSRPAWSKNSF*ILKQRQ Trigger: TTGTCGCTGCTTCAAAATCAAGAAGGAATTTTTGCT...CCAGGCTGGCCTAGAACTCGCAGATGTCCAACCCAGTGCTGGGATTAAAGGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR GCA 72 bp | TATAGACCAGGAGGTTCTCTTAACTCAAGGCAAACCTaGCCCTGCCTCCCAAGTGCTGGGAATAAAGATATA | + |
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Preference number: 3 (lower is better) Translates to: YRPGGSLNSRQT*PCLPSAGNKDI Trigger: TATATCTTTATTCCCAGCACTTGGGAGGCAGGGGCAGGTTTGCCTTGAGTTAAGAGAACCTCCTGGTCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR GCA 72 bp | CCTCCCCCTAATCTTAAAAGAAGGCTGGTATACTCATaGAAGCCTTTAATTCAGTACTCGGGAGGCAGACAC | + |
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Preference number: 3 (lower is better) Translates to: PPPNLKRRLVYS*KPLIQYSGGRH Trigger: GTGTCTGCCTCCCGAGTACTGAATTAAAGGCTTGCATGAGTATACCAGCCTTCTTTTAAGATTAGGGGGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR CAA 90 bp | CGAGTTCTAGGCCAGCCTGGTCTAGAGTCAATTCCAGGACAGTTTGAGGTTATATGCTCTCTTACCTTTTaGGAACTTTCAGTCACACAG | + |
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Preference number: 3 (lower is better) Translates to: RVLGQPGLESIPGQFEVICSLTF*ELSVTQ Trigger: CTGTGTGACTGAAAGTTCCAAAAAGGTAAGAGAGCA...TATAACCTCAAACTGTCCTGGAATTGACTCTAGACCAGGCTGGCCTAGAACTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR CAA 90 bp | TCTACACTGCTCAGGCTGGGTGGGGTCAGACTGAAGCTTAACTTTGTACTCTCTTTTTCCAAGATAGGGTaGCTCTCTTACCTTTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: STLLRLGGVRLKLNFVLSFSKIG*LSYLFG Trigger: TCCAAAAAGGTAAGAGAGCAACCCTATCTTGGAAAA...AGAGAGTACAAAGTTAAGCTTCAGTCTGACCCCACCCAGCCTGAGCAGTGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR GCA 72 bp | CTTTTTGGAACTTTCAGTCACACAGGTCTACACACCTaGCTATACGACCATCACCTCGATAAAACCCGATTT | + |
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Preference number: 3 (lower is better) Translates to: LFGTFSHTGLHT*LYDHHLDKTRF Trigger: AAATCGGGTTTTATCGAGGTGATGGTCGTATAGGCAGGTGTGTAGACCTGTGTGACTGAAAGTTCCAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR-3UTR CAA 90 bp | CGAGTTCTAGGCCAGCCTGGTCTAGAGTCAATTCCAGGACAGTTTGAGGTTATACAACTGTCGGAGTGTTaGAAAGACAATTACTATTTG | + |
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Preference number: 3 (lower is better) Translates to: RVLGQPGLESIPGQFEVIQLSEC*KDNYYL Trigger: CAAATAGTAATTGTCTTTCAAACACTCCGACAGTTG...TATAACCTCAAACTGTCCTGGAATTGACTCTAGACCAGGCTGGCCTAGAACTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CCA 72 bp | TTTGTTTTCCAAGATAGGGTTGCTCTCTTACCTTTTTaGAACTTTCAGTCACACAGGTCTACACACCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: FVFQDRVALLPF*NFQSHRSTHLP Trigger: AGGCAGGTGTGTAGACCTGTGTGACTGAAAGTTCCAAAAAGGTAAGAGAGCAACCCTATCTTGGAAAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR TCA 72 bp | AACTCCTTCTGTTGCCAGAGGATGGCCTTAAACTTCTaGTCTTGTCTGCATTTTGAGTTCTGGGATCATTAT | + |
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Preference number: 3 (lower is better) Translates to: NSFCCQRMALNF*SCLHFEFWDHY Trigger: ATAATGATCCCAGAACTCAAAATGCAGACAAGATCAGAAGTTTAAGGCCATCCTCTGGCAACAGAAGGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CCA 72 bp | CCAAGTGCTGGGAATAAAGATATATGCCACCATGACTaGCCCTATCCACAATTTATTTTAGTTGCTGTTAGA | + |
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Preference number: 3 (lower is better) Translates to: PSAGNKDICHHD*PYPQFILVAVR Trigger: TCTAACAGCAACTAAAATAAATTGTGGATAGGGCCAGTCATGGTGGCATATATCTTTATTCCCAGCACTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR TCA 72 bp | GATACACAAGTAACACAAATGTCAACAGGAACACTATaGAAACTCAAACTTCCAGCATTGAATAAAAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: DTQVTQMSTGTL*KLKLPALNKKG Trigger: TCCCTTTTTATTCAATGCTGGAAGTTTGAGTTTTCATAGTGTTCCTGTTGACATTTGTGTTACTTGTGTATC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CCA 72 bp | AAAATAAACAATTATTTTATAGCCATGAACTACATCTaGGGAAAGCAGGCATGTGAACAGGTATACAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: KINNYFIAMNYI*GKQACEQVYRS Trigger: ACTTCTGTATACCTGTTCACATGCCTGCTTTCCCCAGATGTAGTTCATGGCTATAAAATAATTGTTTATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR TCA 90 bp | GGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCGACAGGTCACGCCCATaGCCCTGTGAATCCCTACCG | + |
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Preference number: 4 (lower is better) Translates to: GKSTRLLFRRSEVQIPATDRSRP*PCESLP Trigger: CGGTAGGGATTCACAGGGTCATGGGCGTGACCTGTC...GGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR CCA 90 bp | CAGGAGGTTCTCTTAACTCAAGGCAAACCTGCCCCTGCCTCCCAAGTGCTGGGATTCTTTACCCTCAGCTaGACTCTCAGTCTTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QEVLLTQGKPAPASQVLGFFTLS*TLSLLS Trigger: GCTCAGAAGACTGAGAGTCCAGCTGAGGGTAAAGAA...TCCCAGCACTTGGGAGGCAGGGGCAGGTTTGCCTTGAGTTAAGAGAACCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR TCA 90 bp | GGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCGGACTCTCAGTCTTCTaGGCATCAGTTTTGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: GKSTRLLFRRSEVQIPATGLSVF*ASVLDF Trigger: GAAGTCCAAAACTGATGCTCAGAAGACTGAGAGTCC...GGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR TCA 90 bp | CTTTTTGGAACTTTCAGTCACACAGGTCTACACACCTGCCTATACGACCATCACGCTGGTCCTCCAAGATaGAATGAAGGAGGCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LFGTFSHTGLHTCLYDHHAGPPR*NEGGGG Trigger: ACCGCCGCCTCCTTCATTTCATCTTGGAGGACCAGC...GTGATGGTCGTATAGGCAGGTGTGTAGACCTGTGTGACTGAAAGTTCCAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR TCA 90 bp | ATGCCTTTAATCCCAGCACTGGGTTGGACATCTGCGAGTTCTAGGCCAGCCTGGGCAGCTTCATTTTCTTaGTCAAGTTCCTCAATCTTG | + |
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Preference number: 4 (lower is better) Translates to: MPLIPALGWTSASSRPAWAASFS*SSSSIL Trigger: CAAGATTGAGGAACTTGATCAAGAAAATGAAGCTGC...CCAGGCTGGCCTAGAACTCGCAGATGTCCAACCCAGTGCTGGGATTAAAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR CCA 90 bp | CGAGTTCTAGGCCAGCCTGGTCTAGAGTCAATTCCAGGACAGTTTGAGGTTATACTGCTGCAGCATGAATaGATCACCCATTGTGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RVLGQPGLESIPGQFEVILLQHE*ITHCVS Trigger: GGACACACAATGGGTGATCCATTCATGCTGCAGCAG...TATAACCTCAAACTGTCCTGGAATTGACTCTAGACCAGGCTGGCCTAGAACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CAA 72 bp | AGGGTCTGCATTCCAGACTGCACTCAACTCCTTCTGTaGCCAGAGGATGGCCTTAAACTTCTGATCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RVCIPDCTQLLL*PEDGLKLLILS Trigger: AGACAAGATCAGAAGTTTAAGGCCATCCTCTGGCAACAGAAGGAGTTGAGTGCAGTCTGGAATGCAGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CAA 72 bp | AATTCAGTACTCGGGAGGCAGACACAGGCTTCTGCTTaGGAAGTCAGCACAGTCTACACAGTAAGTTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: NSVLGRQTQASA*EVSTVYTVSFS Trigger: GCTGAAACTTACTGTGTAGACTGTGCTGACTTCCAAAGCAGAAGCCTGTGTCTGCCTCCCGAGTACTGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR TCA 90 bp | CAGGATTCTAATTTAAATAGTAGCAAAACAGGGTCTGCATTCCAGACTGCACTCTCCTCCAAGATGAAATaGAGGAGGCGGCGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QDSNLNSSKTGSAFQTALSSKMK*RRRRSQ Trigger: CTGGGACCGCCGCCTCCTTCATTTCATCTTGGAGGA...GAGTGCAGTCTGGAATGCAGACCCTGTTTTGCTACTATTTAAATTAGAATCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGGACAGGTCACGCCCATaGCCCTGTGAATCCCTACCG | + |
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Preference number: 4 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLDRSRP*PCESLP Trigger: CGGTAGGGATTCACAGGGTCATGGGCGTGACCTGTC...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 |
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| CDS-3UTR TCA 90 bp | CGAGTTCTAGGCCAGCCTGGTCTAGAGTCAATTCCAGGACAGTTTGAGGTTATATTTCACAGCTTTATCTaGAGGCTCCTTTTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RVLGQPGLESIPGQFEVIFHSFI*RLLFPI Trigger: GATGGGAAAAAGGAGCCTTCAGATAAAGCTGTGAAA...TATAACCTCAAACTGTCCTGGAATTGACTCTAGACCAGGCTGGCCTAGAACTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR TCA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACTCCTCCAAGATGAAATaGAGGAGGCGGCGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHSSKMK*RRRRSQ Trigger: CTGGGACCGCCGCCTCCTTCATTTCATCTTGGAGGA...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCCTCCAAGATGAAATaGAGGAGGCGGCGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLSSKMK*RRRRSQ Trigger: CTGGGACCGCCGCCTCCTTCATTTCATCTTGGAGGA...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGGCTGGTCCTCCAAGATaGAATGAAGGAGGCGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLAGPPR*NEGGGG Trigger: ACCGCCGCCTCCTTCATTTCATCTTGGAGGACCAGC...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CCA 90 bp | GTACCAGAGTGGGCTGATCTACTGCACAAAATTCACTTCTGGGATACACAAGTATGGCCAAAATATTACTaGCCTGGTCTGTATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPEWADLLHKIHFWDTQVWPKYY*PGLYLH Trigger: GTGGAGATACAGACCAGGCCAGTAATATTTTGGCCA...TACTTGTGTATCCCAGAAGTGAATTTTGTGCAGTAGATCAGCCCACTCTGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR CCA 90 bp | CGAGTTCTAGGCCAGCCTGGTCTAGAGTCAATTCCAGGACAGTTTGAGGTTATAGGACTTCTTATCACTTaGAGATTCTTTTCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLGQPGLESIPGQFEVIGLLIT*RFFSIW Trigger: CCAGATGGAAAAGAATCTCCAAGTGATAAGAAGTCC...TATAACCTCAAACTGTCCTGGAATTGACTCTAGACCAGGCTGGCCTAGAACTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR CCA 90 bp | CAGGATTCTAATTTAAATAGTAGCAAAACAGGGTCTGCATTCCAGACTGCACTCTGTGAACAACTCGGCTaGTTTCCACTCTGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDSNLNSSKTGSAFQTALCEQLG*FPLCLF Trigger: AAAAAGGCAGAGTGGAAACCAGCCGAGTTGTTCACA...GAGTGCAGTCTGGAATGCAGACCCTGTTTTGCTACTATTTAAATTAGAATCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR TCA 90 bp | TGGGCTGATCTACTGCACAAAATTCACTTCTGGGATACACAAGTAACACAAATGTTAACACATCTCCCCTaGAACCAAAGTGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WADLLHKIHFWDTQVTQMLTHLP*NQSAFF Trigger: AAAGAAGGCACTTTGGTTTCAGGGGAGATGTGTTAA...CATTTGTGTTACTTGTGTATCCCAGAAGTGAATTTTGTGCAGTAGATCAGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGGGACTCTCAGTCTTCTaGGCATCAGTTTTGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLGLSVF*ASVLDF Trigger: GAAGTCCAAAACTGATGCTCAGAAGACTGAGAGTCC...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CCA 90 bp | CAGGATTCTAATTTAAATAGTAGCAAAACAGGGTCTGCATTCCAGACTGCACTCTCTGAGCATCAGTTTTaGACTTCTTATCACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QDSNLNSSKTGSAFQTALSEHQF*TSYHLE Trigger: CTCCAAGTGATAAGAAGTCCAAAACTGATGCTCAGA...GAGTGCAGTCTGGAATGCAGACCCTGTTTTGCTACTATTTAAATTAGAATCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR CCA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACTTCTTTACCCTCAGCTaGACTCTCAGTCTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHFFTLS*TLSLLS Trigger: GCTCAGAAGACTGAGAGTCCAGCTGAGGGTAAAGAA...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACTGGCCAAAATATTACTaGCCTGGTCTGTATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHWPKYY*PGLYLH Trigger: GTGGAGATACAGACCAGGCCAGTAATATTTTGGCCA...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACTGTGAACAACTCGGCTaGTTTCCACTCTGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHCEQLG*FPLCLF Trigger: AAAAAGGCAGAGTGGAAACCAGCCGAGTTGTTCACA...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR TCA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACTTAACACATCTCCCCTaGAACCAAAGTGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHLTHLP*NQSAFF Trigger: AAAGAAGGCACTTTGGTTTCAGGGGAGATGTGTTAA...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTTAACACATCTCCCCTaGAACCAAAGTGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLLTHLP*NQSAFF Trigger: AAAGAAGGCACTTTGGTTTCAGGGGAGATGTGTTAA...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR TCA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACTTTCACAGCTTTATCTaGAGGCTCCTTTTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHFHSFI*RLLFPI Trigger: GATGGGAAAAAGGAGCCTTCAGATAAAGCTGTGAAA...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGAAAATATTACTGGCCTaGTCTGTATCTCCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLKILLA*SVSPRC Trigger: ACACCGTGGAGATACAGACCAGGCCAGTAATATTTT...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACAAAATATTACTGGCCTaGTCTGTATCTCCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHKILLA*SVSPRC Trigger: ACACCGTGGAGATACAGACCAGGCCAGTAATATTTT...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 |
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| 3UTR CAA 72 bp | CAGATTATTCAACACAGCAAAAATTCCTTCTTGATTTaGAAGCAGCGACAAGACGAATCTTTCCAATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QIIQHSKNSFLI*KQRQDESFQCY Trigger: GTAGCATTGGAAAGATTCGTCTTGTCGCTGCTTCAAAATCAAGAAGGAATTTTTGCTGTGTTGAATAATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| 3UTR CAA 72 bp | GGTCTTCAGATTATTCAACACAGCAAAAATTCCTTCTaGATTTTGAAGCAGCGACAAGACGAATCTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLQIIQHSKNSF*ILKQRQDESFQ Trigger: TTGGAAAGATTCGTCTTGTCGCTGCTTCAAAATCAAGAAGGAATTTTTGCTGTGTTGAATAATCTGAAGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGGCAGCTTCATTTTCTTaGTCAAGTTCCTCAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLAASFS*SSSSIL Trigger: CAAGATTGAGGAACTTGATCAAGAAAATGAAGCTGC...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGGGACTTCTTATCACTTaGAGATTCTTTTCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLGLLIT*RFFSIW Trigger: CCAGATGGAAAAGAATCTCCAAGTGATAAGAAGTCC...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACGGACTTCTTATCACTTaGAGATTCTTTTCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHGLLIT*RFFSIW Trigger: CCAGATGGAAAAGAATCTCCAAGTGATAAGAAGTCC...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACTCTGAGCATCAGTTTTaGACTTCTTATCACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHSEHQF*TSYHLE Trigger: CTCCAAGTGATAAGAAGTCCAAAACTGATGCTCAGA...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCTGAGCATCAGTTTTaGACTTCTTATCACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLSEHQF*TSYHLE Trigger: CTCCAAGTGATAAGAAGTCCAAAACTGATGCTCAGA...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACACTTGTGTCTTTGTTTaGATCATCAGCATTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHTCVFV*IISILS Trigger: GCTGAGAATGCTGATGATCCAAACAAAGACACAAGT...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGACTTGTGTCTTTGTTTaGATCATCAGCATTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLTCVFV*IISILS Trigger: GCTGAGAATGCTGATGATCCAAACAAAGACACAAGT...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CAA 90 bp | CAGGAGGTTCTCTTAACTCAAGGCAAACCTGCCCCTGCCTCCCAAGTGCTGGGAATAATAACCAGATTCTaGAGAACGACTTCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QEVLLTQGKPAPASQVLGIITRF*RTTSMV Trigger: GACCATGGAAGTCGTTCTCAAGAATCTGGTTATTAT...TCCCAGCACTTGGGAGGCAGGGGCAGGTTTGCCTTGAGTTAAGAGAACCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR CAA 90 bp | CAGGAGGTTCTCTTAACTCAAGGCAAACCTGCCCCTGCCTCCCAAGTGCTGGGACTTATTCTCATCATTTaGGCCATCTGCATTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: QEVLLTQGKPAPASQVLGLILII*AICIFT Trigger: AGTGAAAATGCAGATGGCCAAAATGATGAGAATAAG...TCCCAGCACTTGGGAGGCAGGGGCAGGTTTGCCTTGAGTTAAGAGAACCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR CAA 90 bp | GGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCCATCTGCATTTTCACTaGTGTCTTTGTTTGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: GKSTRLLFRRSEVQIPATHLHFH*CLCLDH Trigger: ATGATCCAAACAAAGACACAAGTGAAAATGCAGATG...GGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR CAA 90 bp | GTACCAGAGTGGGCTGATCTACTGCACAAAATTCACTTCTGGGATACACAAGTAGTGTGTCCAGTATCATaGTCAGGATTCCATTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPEWADLLHKIHFWDTQVVCPVS*SGFHSG Trigger: CCCAGAATGGAATCCTGACAATGATACTGGACACAC...TACTTGTGTATCCCAGAAGTGAATTTTGTGCAGTAGATCAGCCCACTCTGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR CAA 90 bp | TGGGCTGATCTACTGCACAAAATTCACTTCTGGGATACACAAGTAACACAAATGTGCTCCATTGATATGTaGACTCCACTCCTTATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: WADLLHKIHFWDTQVTQMCSIDM*TPLLIR Trigger: TCTAATAAGGAGTGGAGTCAACATATCAATGGAGCA...CATTTGTGTTACTTGTGTATCCCAGAAGTGAATTTTGTGCAGTAGATCAGCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166793.10 |
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| CDS-3UTR CAA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGATAATAACCAGATTCTaGAGAACGACTTCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLIITRF*RTTSMV Trigger: GACCATGGAAGTCGTTCTCAAGAATCTGGTTATTAT...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 |
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| CDS-3UTR CAA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACTGCTCCATTGATATGTaGACTCCACTCCTTATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHCSIDM*TPLLIR Trigger: TCTAATAAGGAGTGGAGTCAACATATCAATGGAGCA...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 |
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| CDS-3UTR CAA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACCATCTGCATTTTCACTaGTGTCTTTGTTTGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHHLHFH*CLCLDH Trigger: ATGATCCAAACAAAGACACAAGTGAAAATGCAGATG...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CAA 90 bp | GTTGTTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGCTTATTCTCATCATTTaGGCCATCTGCATTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VVFHSLQQSIFRKYFCLLLILII*AICIFT Trigger: AGTGAAAATGCAGATGGCCAAAATGATGAGAATAAG...CAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAACAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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| CDS-3UTR CAA 90 bp | TTTTCCATAGCTTACAACAGTCAATCTTTAGGAAGTACTTTTGTCTGTTGTCACCTTATTCTCATCATTTaGGCCATCTGCATTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FSIAYNSQSLGSTFVCCHLILII*AICIFT Trigger: AGTGAAAATGCAGATGGCCAAAATGATGAGAATAAG...GTGACAACAGACAAAAGTACTTCCTAAAGATTGACTGTTGTAAGCTATGGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000166793.10 ENSMUST00000235199.2 ENSMUST00000235960.2 |
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