Pregenerated sensors for MATN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020583Ensembl transcript IDs: ENSMUST00000020899.5
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATTCCACAAACCGTCCACCCACACACGTCCACATGTGCTGTGGTaGGTGTGCACCCATGCAGACATAAGCACACGCATGCGCACAAAC | + |
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Preference number: 1 (lower is better) Translates to: PFHKPSTHTRPHVLW*VCTHADISTRMRTN Trigger: GTTTGTGCGCATGCGTGTGCTTATGTCTGCATGGGTGCACACGCACCACAGCACATGTGGACGTGTGTGGGTGGACGGTTTGTGGAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| 3UTR-3UTR GCA 90 bp | TGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCACTCCACATGTGCTGTGGTaGGTGTGCACCCATGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: WLGRQRHPPPSLMTNRITPHVLW*VCTHAD Trigger: GTCTGCATGGGTGCACACGCACCACAGCACATGTGG...AGTGATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| 3UTR-3UTR GCA 90 bp | AGATGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCGTGCGTGTGCACCCATaGAGACATAAGCACACGCAT | + |
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Preference number: 2 (lower is better) Translates to: RWLGRQRHPPPSLMTNRIVRVHP*RHKHTH Trigger: ATGCGTGTGCTTATGTCTGCATGGGTGCACACGCAC...GATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| 3UTR-3UTR TCA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTGCACATCAGATAGCGTaGCAAGAGAATGAGAATCGC | + |
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Preference number: 2 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRAHQIA*QENENR Trigger: GCGATTCTCATTCTCTTGTCACGCTATCTGATGTGC...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| 3UTR-3UTR GCA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTCTTACTAACATTTTATaGCTCAACAGAGGCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRLTNIL*LNRGMR Trigger: TCTCATGCCTCTGTTGAGGCATAAAATGTTAGTAAG...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| 3UTR-3UTR CCA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTACACATTTATCTCCTTaGAAAACAATATGGTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRTHLSP*KTIWFS Trigger: GGAGAACCATATTGTTTTCCAAGGAGATAAATGTGT...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| 3UTR GCA 72 bp | AAACCGTCCACCCACACACGTCCACATGTGCTGTGGTaGGTGTGCACCCATGCAGACATAAGCACACGCATG | + |
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Preference number: 3 (lower is better) Translates to: KPSTHTRPHVLW*VCTHADISTRM Trigger: CATGCGTGTGCTTATGTCTGCATGGGTGCACACGCACCACAGCACATGTGGACGTGTGTGGGTGGACGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| 3UTR CCA 72 bp | CATGATTGGGATTCTGAAAATGTCACAGTGAGGGGCTaGCAAGATGGCTCGGCAGGCAGAGGCACCCACCTC | + |
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Preference number: 3 (lower is better) Translates to: HDWDSENVTVRG*QDGSAGRGTHL Trigger: GAGGTGGGTGCCTCTGCCTGCCGAGCCATCTTGCCAGCCCCTCACTGTGACATTTTCAGAATCCCAATCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CCA 90 bp | TGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCACTCCTGGAATGCCAGCGTaGCCCCACAGCCGCAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: WLGRQRHPPPSLMTNRITPGMPA*PHSRRR Trigger: ACGCCTGCGGCTGTGGGGCCACGCTGGCATTCCAGG...AGTGATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | TGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCACTCCCCGGCCTCCACAGTaGAGGCTTCCTCCATCGCTG | + |
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Preference number: 4 (lower is better) Translates to: WLGRQRHPPPSLMTNRITPRPPQ*RLPPSL Trigger: CAGCGATGGAGGAAGCCTTCACTGTGGAGGCCGGGG...AGTGATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | TGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCACTAGAGATGCCCAGGGCTaGCTCCGGGGACTCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: WLGRQRHPPPSLMTNRITRDAQG*LRGLVS Trigger: GGACACGAGTCCCCGGAGGCAGCCCTGGGCATCTCT...AGTGATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTGCCAGAGCAGAGAGATaGCCAGGGCTGCCTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRARAER*PGLPPG Trigger: CCCCGGAGGCAGCCCTGGGCATCTCTCTGCTCTGGC...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | TGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCACTATGTGCTGGCAGCCATaGGTGCCTAGAGCACACTTG | + |
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Preference number: 4 (lower is better) Translates to: WLGRQRHPPPSLMTNRITMCWQP*VPRAHL Trigger: CAAGTGTGCTCTAGGCACTCATGGCTGCCAGCACAT...AGTGATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | AGATGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCTCTGGAGATGGGAGCTaGCCTTCTCCTGGAATGCCA | + |
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Preference number: 4 (lower is better) Translates to: RWLGRQRHPPPSLMTNRISGDGS*PSPGMP Trigger: TGGCATTCCAGGAGAAGGTCAGCTCCCATCTCCAGA...GATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | AGATGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCCCAAGTCCAAAGGCCTaGTCTTGCAAACACCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: RWLGRQRHPPPSLMTNRIPSPKA*SCKHLR Trigger: GCGCAGGTGTTTGCAAGAGCAGGCCTTTGGACTTGG...GATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTCCAAAGGCCTGCTCTTaGAAACACCTGCGCCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRPKACS*KHLRRG Trigger: GCCGCGGCGCAGGTGTTTGCAAGAGCAGGCCTTTGG...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | CCAAGCCTGATGACCAACCGGATCACTAGAACACAGTGGCGGAAGGAGAGAAGCGACCTTCTCCTGGAATaGCAGCGTGGCCCCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: PSLMTNRITRTQWRKERSDLLLE*QRGPTA Trigger: GGCTGTGGGGCCACGCTGGCATTCCAGGAGAAGGTC...GCTTCTCTCCTTCCGCCACTGTGTTCTAGTGATCCGGTTGGTCATCAGGCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | TGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCACTGTGCCAAGCATGCACTaGTCCAGAGCACAAAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: WLGRQRHPPPSLMTNRITVPSMH*SRAQKV Trigger: AACCTTTTGTGCTCTGGATCAGTGCATGCTTGGCAC...AGTGATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CCA 90 bp | AGATGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCTTGGTGTTCAGCTTCTaGAGATGGGAGCTGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: RWLGRQRHPPPSLMTNRILVFSF*RWELTF Trigger: GAAGGTCAGCTCCCATCTCCAGAAGCTGAACACCAA...GATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | CCAAGCCTGATGACCAACCGGATCACTAGAACACAGTGGCGGAAGGAGAGAAGCCTGACACACACGTGCTaGCACTGGTGTGTGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: PSLMTNRITRTQWRKERSLTHTC*HWCVPS Trigger: GCTTGGCACACACCAGTGTCAGCACGTGTGTGTCAG...GCTTCTCTCCTTCCGCCACTGTGTTCTAGTGATCCGGTTGGTCATCAGGCTTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTCAAGGGTGTGATCCGTaGCACAGCCTGTTTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRQGCDP*HSLFQG Trigger: GCCCTGAAACAGGCTGTGGCACGGATCACACCCTTG...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | TGGGATTCTGAAAATGTCACAGTGAGGGGCTGGCAAGATGGCTCGGCAGGCAGATCATTCACCTGGTCCTaGGGCCTCCCATCTGTCACG | + |
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Preference number: 4 (lower is better) Translates to: WDSENVTVRGWQDGSAGRSFTWS*GLPSVT Trigger: CGTGACAGATGGGAGGCCGCAGGACCAGGTGAATGA...TCTGCCTGCCGAGCCATCTTGCCAGCCCCTCACTGTGACATTTTCAGAATCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | TGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCACTACACTTATCAATGGCTaGACACGTTTTCCCATCAGC | + |
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Preference number: 4 (lower is better) Translates to: WLGRQRHPPPSLMTNRITTLING*TRFPIS Trigger: GCTGATGGGAAAACGTGTTCAGCCATTGATAAGTGT...AGTGATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | AGATGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCACTCTATCTTCACAGTaGTGGCATAGTTCACCACAG | + |
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Preference number: 4 (lower is better) Translates to: RWLGRQRHPPPSLMTNRITLSSQ*WHSSPQ Trigger: CTGTGGTGAACTATGCCAGCACTGTGAAGATAGAGT...GATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | TGGGATTCTGAAAATGTCACAGTGAGGGGCTGGCAAGATGGCTCGGCAGGCAGACAGCATACAGCTCAATaGCAGATGCACGGGCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: WDSENVTVRGWQDGSAGRQHTAQ*QMHGLE Trigger: CTCGAGCCCGTGCATCTGGCATTGAGCTGTATGCTG...TCTGCCTGCCGAGCCATCTTGCCAGCCCCTCACTGTGACATTTTCAGAATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTTGTCCAGAGTGTCGATaGTGCGGGAGACAAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRCPECR*CGRQRS Trigger: AGACCTTTGTCTCCCGCATCATCGACACTCTGGACA...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | CCAAGCCTGATGACCAACCGGATCACTAGAACACAGTGGCGGAAGGAGAGAAGCCAGAAAGCTTCTCAATaGCCCCGTAGGTCTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: PSLMTNRITRTQWRKERSQKASQ*PRRSPR Trigger: ACGTGGAGACCTACGGGGTCATTGAGAAGCTTTCTG...GCTTCTCTCCTTCCGCCACTGTGTTCTAGTGATCCGGTTGGTCATCAGGCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CCA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTTTCAGCTTCTGGAGATaGGAGCTGACCTTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRFSFWR*ELTFSW Trigger: CCAGGAGAAGGTCAGCTCCCATCTCCAGAAGCTGAA...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CCA 90 bp | TGGGATTCTGAAAATGTCACAGTGAGGGGCTGGCAAGATGGCTCGGCAGGCAGACTATCTTCACAGTGCTaGCATAGTTCACCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: WDSENVTVRGWQDGSAGRLSSQC*HSSPQP Trigger: TGGCTGTGGTGAACTATGCCAGCACTGTGAAGATAG...TCTGCCTGCCGAGCCATCTTGCCAGCCCCTCACTGTGACATTTTCAGAATCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CCA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTTTCACACAGATGTGCTaGCAACCATGTGTACCAGAG | + |
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Preference number: 4 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRFTQMC*QPCVPE Trigger: CTCTGGTACACATGGTTGCCAGCACATCTGTGTGAA...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | TGGGATTCTGAAAATGTCACAGTGAGGGGCTGGCAAGATGGCTCGGCAGGCAGAATCTGTTCACATCCATaGGTGCTAAGGGCACACTTA | + |
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Preference number: 4 (lower is better) Translates to: WDSENVTVRGWQDGSAGRICSHP*VLRAHL Trigger: TAAGTGTGCCCTTAGCACTCATGGATGTGAACAGAT...TCTGCCTGCCGAGCCATCTTGCCAGCCCCTCACTGTGACATTTTCAGAATCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CCA 90 bp | TGGGATTCTGAAAATGTCACAGTGAGGGGCTGGCAAGATGGCTCGGCAGGCAGAGGGCACACTTATCAATaGCTGAACACGTTTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: WDSENVTVRGWQDGSAGRGHTYQ*LNTFSH Trigger: ATGGGAAAACGTGTTCAGCCATTGATAAGTGTGCCC...TCTGCCTGCCGAGCCATCTTGCCAGCCCCTCACTGTGACATTTTCAGAATCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | TGGGATTCTGAAAATGTCACAGTGAGGGGCTGGCAAGATGGCTCGGCAGGCAGAACACTTGTTCCGGACTaGACATGTTTTCTTATCTGC | + |
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Preference number: 4 (lower is better) Translates to: WDSENVTVRGWQDGSAGRTLVPD*TCFLIC Trigger: GCAGATAAGAAAACATGTTCAGTCCGGAACAAGTGT...TCTGCCTGCCGAGCCATCTTGCCAGCCCCTCACTGTGACATTTTCAGAATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | TGGGATTCTGAAAATGTCACAGTGAGGGGCTGGCAAGATGGCTCGGCAGGCAGAGGCTTCTTCAATGTCTaGACATGTCTTCTTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: WDSENVTVRGWQDGSAGRGFFNV*TCLLVI Trigger: GATGACAAGAAGACATGTTCAGACATTGAAGAAGCC...TCTGCCTGCCGAGCCATCTTGCCAGCCCCTCACTGTGACATTTTCAGAATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CCA 90 bp | CCAAGCCTGATGACCAACCGGATCACTAGAACACAGTGGCGGAAGGAGAGAAGCGCACAAAAGGTTTCCTaGAATCTAGCAGAAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PSLMTNRITRTQWRKERSAQKVS*NLAESF Trigger: GAAGCTTTCTGCTAGATTCCAGGAAACCTTTTGTGC...GCTTCTCTCCTTCCGCCACTGTGTTCTAGTGATCCGGTTGGTCATCAGGCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CCA 90 bp | ATTTGCACTCTTGGTAGTAAGGCTGGTTCGTATTATAAATATGACCAAGAGAAAAGAAGCCCCGGGAGGTaGCGTAAGGGGGCTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ICTLGSKAGSYYKYDQEKRSPGR*RKGAES Trigger: GCTCTCAGCCCCCTTACGCCACCTCCCGGGGCTTCT...TTTCTCTTGGTCATATTTATAATACGAACCAGCCTTACTACCAAGAGTGCAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | ATTTGCACTCTTGGTAGTAAGGCTGGTTCGTATTATAAATATGACCAAGAGAAACAGCTCAATGCCAGATaGACGGGCTCGAGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ICTLGSKAGSYYKYDQEKQLNAR*TGSSSH Trigger: GTGGCTGCTCGAGCCCGTGCATCTGGCATTGAGCTG...TTTCTCTTGGTCATATTTATAATACGAACCAGCCTTACTACCAAGAGTGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CCA 90 bp | ATTTGCACTCTTGGTAGTAAGGCTGGTTCGTATTATAAATATGACCAAGAGAAACCACCCTCGTGTCTGTaGCCCCGATGTCCAGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: ICTLGSKAGSYYKYDQEKPPSCL*PRCPEC Trigger: ACACTCTGGACATCGGGGCCACAGACACGAGGGTGG...TTTCTCTTGGTCATATTTATAATACGAACCAGCCTTACTACCAAGAGTGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR TCA 90 bp | ATTTGCACTCTTGGTAGTAAGGCTGGTTCGTATTATAAATATGACCAAGAGAAACTGTTGACAAGGGTGTaGTCCGTGCCACAGCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ICTLGSKAGSYYKYDQEKLLTRV*SVPQPV Trigger: AACAGGCTGTGGCACGGATCACACCCTTGTCAACAG...TTTCTCTTGGTCATATTTATAATACGAACCAGCCTTACTACCAAGAGTGCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR GCA 90 bp | ATTTGCACTCTTGGTAGTAAGGCTGGTTCGTATTATAAATATGACCAAGAGAAAGGTGTGTGCCAAGCATaGACTGATCCAGAGCACAAA | + |
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Preference number: 4 (lower is better) Translates to: ICTLGSKAGSYYKYDQEKGVCQA*TDPEHK Trigger: TTTGTGCTCTGGATCAGTGCATGCTTGGCACACACC...TTTCTCTTGGTCATATTTATAATACGAACCAGCCTTACTACCAAGAGTGCAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CCA 90 bp | CAAAGGCCTGCTCTTGCAAACACCTGCGCCGCGGCCCCCGGAATATaGCGCGCGGGTGGAAGTAGCCAGAGCAGAGAGATGCCCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: QRPALANTCAAAPGI*RAGGSSQSREMPRA Trigger: AGCCCTGGGCATCTCTCTGCTCTGGCTACTTCCACCCGCGCGCCATATTCCGGGGGCCGCGGCGCAGGTGTTTGCAAGAGCAGGCCTTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 90 bp | CATATCTGCCCGGTCCACACCCACAGCATACAGCTCAATGCCAGATaGACGGGCTCGAGCAGCCACCTCATTCACCTGGTCCTGCGGCCT | + |
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Preference number: 5 (lower is better) Translates to: HICPVHTHSIQLNAR*TGSSSHLIHLVLRP Trigger: AGGCCGCAGGACCAGGTGAATGAGGTGGCTGCTCGAGCCCGTGCATCTGGCATTGAGCTGTATGCTGTGGGTGTGGACCGGGCAGATATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CCA 90 bp | CCCCGAGCCCCGGCCTCCACAGTGAAGGCTTCCTCCATCGCTGTCTaGATAGCTAGCCCTGACATGGTGCCTGTTGACAAGGGTGTGATC | + |
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Preference number: 5 (lower is better) Translates to: PRAPASTVKASSIAV*IASPDMVPVDKGVI Trigger: GATCACACCCTTGTCAACAGGCACCATGTCAGGGCTAGCTATCCAGACAGCGATGGAGGAAGCCTTCACTGTGGAGGCCGGGGCTCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 90 bp | ATCAATGATGAACACCAAGTCCAAAGGCCTGCTCTTGCAAACACCTaGGCCGCGGCCCCCGGAATATGGCGCGCGGGTGGAAGTAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: INDEHQVQRPALANT*AAAPGIWRAGGSSQ Trigger: CTGGCTACTTCCACCCGCGCGCCATATTCCGGGGGCCGCGGCGCAGGTGTTTGCAAGAGCAGGCCTTTGGACTTGGTGTTCATCATTGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 90 bp | GGGACTCCATATCTGCCCGGTCCACACCCACAGCATACAGCTCAATaGCAGATGCACGGGCTCGAGCAGCCACCTCATTCACCTGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: GTPYLPGPHPQHTAQ*QMHGLEQPPHSPGP Trigger: AGGACCAGGTGAATGAGGTGGCTGCTCGAGCCCGTGCATCTGGCATTGAGCTGTATGCTGTGGGTGTGGACCGGGCAGATATGGAGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CAA 90 bp | TGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCACTTGCTCTTCCAGGGGCTaGCTAGCCATCATCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: WLGRQRHPPPSLMTNRITCSSRG*LAIILR Trigger: CCTCAAGATGATGGCTAGCAAGCCCCTGGAAGAGCA...AGTGATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CAA 90 bp | AGATGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCGTTCAAGGTGTAGCCTaGGCTGCACTCGCAGTGATG | + |
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Preference number: 5 (lower is better) Translates to: RWLGRQRHPPPSLMTNRIVQGVA*AALAVM Trigger: CATCACTGCGAGTGCAGCCAAGGCTACACCTTGAAC...GATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CAA 90 bp | TGGGATTCTGAAAATGTCACAGTGAGGGGCTGGCAAGATGGCTCGGCAGGCAGATCCAAAGGCCTGCTCTaGCAAACACCTGCGCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: WDSENVTVRGWQDGSAGRSKGLL*QTPAPR Trigger: CCGCGGCGCAGGTGTTTGCAAGAGCAGGCCTTTGGA...TCTGCCTGCCGAGCCATCTTGCCAGCCCCTCACTGTGACATTTTCAGAATCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CAA 90 bp | TGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCACTACAAAGGTCTTCACCTaGGTGAATTCCAGAGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: WLGRQRHPPPSLMTNRITTKVFT*VNSRGR Trigger: CCGGCCTCTGGAATTCACCAAGGTGAAGACCTTTGT...AGTGATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS TCA 90 bp | TGTAGCCTTGGCTGCACTCGCAGTGATGCTTGCCGTCACCATCGCTaGCACACACGTGCTGACACTGGTGTGTGCCAAGCATGCACTGAT | + |
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Preference number: 5 (lower is better) Translates to: CSLGCTRSDACRHHR*HTRADTGVCQACTD Trigger: ATCAGTGCATGCTTGGCACACACCAGTGTCAGCACGTGTGTGTCAGCGATGGTGACGGCAAGCATCACTGCGAGTGCAGCCAAGGCTACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 90 bp | CTCTTCCAGGGGCTTGCTAGCCATCATCTTGAGGGACTCCATATCTaGCCGGTCCACACCCACAGCATACAGCTCAATGCCAGATGCACG | + |
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Preference number: 5 (lower is better) Translates to: LFQGLASHHLEGLHI*PVHTHSIQLNARCT Trigger: CGTGCATCTGGCATTGAGCTGTATGCTGTGGGTGTGGACCGGGCAGATATGGAGTCCCTCAAGATGATGGCTAGCAAGCCCCTGGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 90 bp | TTTGGTGTTCAGCTTCTGGAGATGGGAGCTGACCTTCTCCTGGAATaGCAGCGTGGCCCCACAGCCGCAGGCGTCTTCTATGGAAATGAG | + |
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Preference number: 5 (lower is better) Translates to: FGVQLLEMGADLLLE*QRGPTAAGVFYGNE Trigger: CTCATTTCCATAGAAGACGCCTGCGGCTGTGGGGCCACGCTGGCATTCCAGGAGAAGGTCAGCTCCCATCTCCAGAAGCTGAACACCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CCA 90 bp | TCAAGTTTGGTGTTCAGCTTCTGGAGATGGGAGCTGACCTTCTCCTaGAATGCCAGCGTGGCCCCACAGCCGCAGGCGTCTTCTATGGAA | + |
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Preference number: 5 (lower is better) Translates to: SSLVFSFWRWELTFS*NASVAPQPQASSME Trigger: TTCCATAGAAGACGCCTGCGGCTGTGGGGCCACGCTGGCATTCCAGGAGAAGGTCAGCTCCCATCTCCAGAAGCTGAACACCAAACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS TCA 90 bp | TCAAAATGTTGTCAAGTTTGGTGTTCAGCTTCTGGAGATGGGAGCTaGCCTTCTCCTGGAATGCCAGCGTGGCCCCACAGCCGCAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: SKCCQVWCSASGDGS*PSPGMPAWPHSRRR Trigger: ACGCCTGCGGCTGTGGGGCCACGCTGGCATTCCAGGAGAAGGTCAGCTCCCATCTCCAGAAGCTGAACACCAAACTTGACAACATTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CAA 90 bp | AGATGGCTCGGCAGGCAGAGGCACCCACCTCCAAGCCTGATGACCAACCGGATCGAGCCATTTCTGTCGTaGACACAGATCTGTTCACAT | + |
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Preference number: 5 (lower is better) Translates to: RWLGRQRHPPPSLMTNRIEPFLS*TQICSH Trigger: ATGTGAACAGATCTGTGTCAACGACAGAAATGGCTC...GATCCGGTTGGTCATCAGGCTTGGAGGTGGGTGCCTCTGCCTGCCGAGCCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CAA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTGTGCCTAGAGCACACTaGTTCCGGACTGAACATGTT | + |
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Preference number: 5 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRVPRAH*FRTEHV Trigger: AACATGTTCAGTCCGGAACAAGTGTGCTCTAGGCAC...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CCA 90 bp | AACTTCTTCAAAATGTTGTCAAGTTTGGTGTTCAGCTTCTGGAGATaGGAGCTGACCTTCTCCTGGAATGCCAGCGTGGCCCCACAGCCG | + |
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Preference number: 5 (lower is better) Translates to: NFFKMLSSLVFSFWR*ELTFSWNASVAPQP Trigger: CGGCTGTGGGGCCACGCTGGCATTCCAGGAGAAGGTCAGCTCCCATCTCCAGAAGCTGAACACCAAACTTGACAACATTTTGAAGAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CAA 90 bp | CCAAGCCTGATGACCAACCGGATCACTAGAACACAGTGGCGGAAGGAGAGAAGCACGATAATAGCTACCTaGGGGATGTTAGACATGGGC | + |
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Preference number: 5 (lower is better) Translates to: PSLMTNRITRTQWRKERSTIIAT*GMLDMG Trigger: GCCCATGTCTAACATCCCCAAGGTAGCTATTATCGT...GCTTCTCTCCTTCCGCCACTGTGTTCTAGTGATCCGGTTGGTCATCAGGCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS TCA 90 bp | GATCTGTTCACATCCATGAGTGCTAAGGGCACACTTATCAATGGCTaGACACGTTTTCCCATCAGCGTTCAAGGTGTAGCCTTGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: DLFTSMSAKGTLING*TRFPISVQGVALAA Trigger: TGCAGCCAAGGCTACACCTTGAACGCTGATGGGAAAACGTGTTCAGCCATTGATAAGTGTGCCCTTAGCACTCATGGATGTGAACAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CAA 90 bp | AACACAGTGGCGGAAGGAGAGAAGCCATTCCACAAACCGTCCACCCACACACGTAAAATGTTGTCAAGTTaGGTGTTCAGCTTCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: NTVAEGEKPFHKPSTHTRKMLSS*VFSFWR Trigger: TCTCCAGAAGCTGAACACCAAACTTGACAACATTTT...ACGTGTGTGGGTGGACGGTTTGTGGAATGGCTTCTCTCCTTCCGCCACTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS TCA 90 bp | GCAGGCGTCTTCTATGGAAATGAGGCTTCGGGCTTCTTCAATGTCTaGACATGTCTTCTTGTCATCATTCAAGGTGTAGCCAGGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: AGVFYGNEASGFFNV*TCLLVIIQGVAREA Trigger: TGCTTCCCTGGCTACACCTTGAATGATGACAAGAAGACATGTTCAGACATTGAAGAAGCCCGAAGCCTCATTTCCATAGAAGACGCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS-3UTR CAA 90 bp | ATTTGCACTCTTGGTAGTAAGGCTGGTTCGTATTATAAATATGACCAAGAGAAAAACTTCTTCAAAATGTaGTCAAGTTTGGTGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: ICTLGSKAGSYYKYDQEKNFFKM*SSLVFS Trigger: GCTGAACACCAAACTTGACAACATTTTGAAGAAGTT...TTTCTCTTGGTCATATTTATAATACGAACCAGCCTTACTACCAAGAGTGCAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 72 bp | TATGGCGCGCGGGTGGAAGTAGCCAGAGCAGAGAGATaGCCAGGGCTGCCTCCGGGGACTCGTGTCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: YGARVEVARAER*PGLPPGTRVPS Trigger: GCTGGGGACACGAGTCCCCGGAGGCAGCCCTGGGCATCTCTCTGCTCTGGCTACTTCCACCCGCGCGCCATA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 72 bp | GAACACCAAGTCCAAAGGCCTGCTCTTGCAAACACCTaGGCCGCGGCCCCCGGAATATGGCGCGCGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: EHQVQRPALANT*AAAPGIWRAGG Trigger: TCCACCCGCGCGCCATATTCCGGGGGCCGCGGCGCAGGTGTTTGCAAGAGCAGGCCTTTGGACTTGGTGTTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 72 bp | CCGGTCCACACCCACAGCATACAGCTCAATGCCAGATaGACGGGCTCGAGCAGCCACCTCATTCACCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: PVHTHSIQLNAR*TGSSSHLIHLV Trigger: GACCAGGTGAATGAGGTGGCTGCTCGAGCCCGTGCATCTGGCATTGAGCTGTATGCTGTGGGTGTGGACCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS TCA 72 bp | GGCTGCACTCGCAGTGATGCTTGCCGTCACCATCGCTaGCACACACGTGCTGACACTGGTGTGTGCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: GCTRSDACRHHR*HTRADTGVCQA Trigger: TGCTTGGCACACACCAGTGTCAGCACGTGTGTGTCAGCGATGGTGACGGCAAGCATCACTGCGAGTGCAGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 72 bp | TATCTGCCCGGTCCACACCCACAGCATACAGCTCAATaGCAGATGCACGGGCTCGAGCAGCCACCTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: YLPGPHPQHTAQ*QMHGLEQPPHS Trigger: TGAATGAGGTGGCTGCTCGAGCCCGTGCATCTGGCATTGAGCTGTATGCTGTGGGTGTGGACCGGGCAGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CCA 72 bp | CCGGCCTCCACAGTGAAGGCTTCCTCCATCGCTGTCTaGATAGCTAGCCCTGACATGGTGCCTGTTGACAAG | + |
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Preference number: 6 (lower is better) Translates to: PASTVKASSIAV*IASPDMVPVDK Trigger: CTTGTCAACAGGCACCATGTCAGGGCTAGCTATCCAGACAGCGATGGAGGAAGCCTTCACTGTGGAGGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS TCA 72 bp | TGTCAAGTTTGGTGTTCAGCTTCTGGAGATGGGAGCTaGCCTTCTCCTGGAATGCCAGCGTGGCCCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: CQVWCSASGDGS*PSPGMPAWPHS Trigger: GCTGTGGGGCCACGCTGGCATTCCAGGAGAAGGTCAGCTCCCATCTCCAGAAGCTGAACACCAAACTTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 72 bp | GGGCTTGCTAGCCATCATCTTGAGGGACTCCATATCTaGCCGGTCCACACCCACAGCATACAGCTCAATGCC | + |
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Preference number: 6 (lower is better) Translates to: GLASHHLEGLHI*PVHTHSIQLNA Trigger: GGCATTGAGCTGTATGCTGTGGGTGTGGACCGGGCAGATATGGAGTCCCTCAAGATGATGGCTAGCAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CAA 72 bp | AAGACGTGCTCTTCCAGGGGCTTGCTAGCCATCATCTaGAGGGACTCCATATCTGCCCGGTCCACACCCACA | + |
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Preference number: 6 (lower is better) Translates to: KTCSSRGLLAII*RDSISARSTPT Trigger: TGTGGGTGTGGACCGGGCAGATATGGAGTCCCTCAAGATGATGGCTAGCAAGCCCCTGGAAGAGCACGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS GCA 72 bp | GGCGCATTTGTCCAGAGCTGCACACGTTCTCCTGTCTaGATTCAAGGCGTAACCTCCATAGCACTCGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GAFVQSCTRSPV*IQGVTSIALAV Trigger: CACTGCGAGTGCTATGGAGGTTACGCCTTGAATGCAGACAGGAGAACGTGTGCAGCTCTGGACAAATGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CAA 72 bp | AGAGTGTCGATGATGCGGGAGACAAAGGTCTTCACCTaGGTGAATTCCAGAGGCCGGACGCTACGAGAACTA | + |
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Preference number: 6 (lower is better) Translates to: RVSMMRETKVFT*VNSRGRTLREL Trigger: TAGTTCTCGTAGCGTCCGGCCTCTGGAATTCACCAAGGTGAAGACCTTTGTCTCCCGCATCATCGACACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CAA 90 bp | CCGATGTCCAGAGTGTCGATGATGCGGGAGACAAAGGTCTTCACCTaGGTGAATTCCAGAGGCCGGACGCTACGAGAACTATCAATGATG | + |
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Preference number: 6 (lower is better) Translates to: PMSRVSMMRETKVFT*VNSRGRTLRELSMM Trigger: CATCATTGATAGTTCTCGTAGCGTCCGGCCTCTGGAATTCACCAAGGTGAAGACCTTTGTCTCCCGCATCATCGACACTCTGGACATCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CCA 72 bp | AAAATGTTGTCAAGTTTGGTGTTCAGCTTCTGGAGATaGGAGCTGACCTTCTCCTGGAATGCCAGCGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: KMLSSLVFSFWR*ELTFSWNASVA Trigger: GGCCACGCTGGCATTCCAGGAGAAGGTCAGCTCCCATCTCCAGAAGCTGAACACCAAACTTGACAACATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS TCA 72 bp | ACATCCATGAGTGCTAAGGGCACACTTATCAATGGCTaGACACGTTTTCCCATCAGCGTTCAAGGTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: TSMSAKGTLING*TRFPISVQGVA Trigger: GGCTACACCTTGAACGCTGATGGGAAAACGTGTTCAGCCATTGATAAGTGTGCCCTTAGCACTCATGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CCA 72 bp | TTCTTCAAAATGTTGTCAAGTTTGGTGTTCAGCTTCTaGAGATGGGAGCTGACCTTCTCCTGGAATGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FFKMLSSLVFSF*RWELTFSWNAS Trigger: GCTGGCATTCCAGGAGAAGGTCAGCTCCCATCTCCAGAAGCTGAACACCAAACTTGACAACATTTTGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS TCA 72 bp | CCATTTCTGTCGTTGACACAGATCTGTTCACATCCATaGGTGCTAAGGGCACACTTATCAATGGCTGAACAC | + |
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Preference number: 6 (lower is better) Translates to: PFLSLTQICSHP*VLRAHLSMAEH Trigger: GTGTTCAGCCATTGATAAGTGTGCCCTTAGCACTCATGGATGTGAACAGATCTGTGTCAACGACAGAAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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| CDS CAA 90 bp | CGATGTACTTGTCCATATTCTGTTACTTTCAACTTCTTCAAAATGTaGTCAAGTTTGGTGTTCAGCTTCTGGAGATGGGAGCTGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: RCTCPYSVTFNFFKM*SSLVFSFWRWELTF Trigger: GAAGGTCAGCTCCCATCTCCAGAAGCTGAACACCAAACTTGACAACATTTTGAAGAAGTTGAAAGTAACAGAATATGGACAAGTACATCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020899.5 |
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