RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MATN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022324

Ensembl transcript IDs: ENSMUST00000022947.7, ENSMUST00000163455.9, ENSMUST00000226766.2, ENSMUST00000227759.2, ENSMUST00000228570.2

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCAGCAGTCAAGCAATCCAGTGTCTCCTGTACTGGTTGTATTTTaGTTTACAGCTTGTAGGTCTGCTTATGGTGGGAGGCTCTACCAC +
Preference number: 1 (lower is better)
Translates to: VQQSSNPVSPVLVVF*FTACRSAYGGRLYH
Trigger: GTGGTAGAGCCTCCCACCATAAGCAGACCTACAAGCTGTAAAGCAAAATACAACCAGTACAGGAGACACTGGATTGCTTGACTGCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR GCA 90 bp CTGGTCTTCCACACACATGGGGAAGCTATTATGATTTCCACCTTCTaGTCCTATTCCTACTCCAACTTGCGAGTTCCAATTTTGGGAATG +
Preference number: 1 (lower is better)
Translates to: LVFHTHGEAIMISTF*SYSYSNLRVPILGM
Trigger: CATTCCCAAAATTGGAACTCGCAAGTTGGAGTAGGAATAGGAGCAGAAGGTGGAAATCATAATAGCTTCCCCATGTGTGTGGAAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR CCA 90 bp TCATCAGATTTCATTATAGGTGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTA +
Preference number: 1 (lower is better)
Translates to: SSDFIIGGCEPPCGC*DLNSGPLEEQSVLL
Trigger: TAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCTATAATGAAATCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR GCA 90 bp AGTCCTTGCTTTGTATTGAGCCTCTTTGTCAGTAAACAAACATCCTaGAGCAAAAATTCCCTGGTCTTCCACACACATGGGGAAGCTATT +
Preference number: 1 (lower is better)
Translates to: SPCFVLSLFVSKQTS*SKNSLVFHTHGEAI
Trigger: AATAGCTTCCCCATGTGTGTGGAAGACCAGGGAATTTTTGCTGCAGGATGTTTGTTTACTGACAAAGAGGCTCAATACAAAGCAAGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR GCA 90 bp GCAATTTGTGGAGTCAGTTTTCTGCCGAAAATGAAATTTCAGTGTTaGAGTAGAAGGAAATTATGTCCACAGTACACCGTGGAACACTAC +
Preference number: 1 (lower is better)
Translates to: AICGVSFLPKMKFQC*SRRKLCPQYTVEHY
Trigger: GTAGTGTTCCACGGTGTACTGTGGACATAATTTCCTTCTACTGCAACACTGAAATTTCATTTTCGGCAGAAAACTGACTCCACAAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR CCA 90 bp AATTTCAGTGTTGCAGTAGAAGGAAATTATGTCCACAGTACACCGTaGAACACTACACTGCGCAGCTTATTTATTCTCATGGTAAACTCA +
Preference number: 1 (lower is better)
Translates to: NFSVAVEGNYVHSTP*NTTLRSLFILMVNS
Trigger: TGAGTTTACCATGAGAATAAATAAGCTGCGCAGTGTAGTGTTCCACGGTGTACTGTGGACATAATTTCCTTCTACTGCAACACTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR-3UTR CCA 90 bp TACATGGCATATGTTCTACTAGCTGGGCTACCTTGTCTGGCCTCAGTGGGAGAGATAGGGGTAGGGTTATaGGAGGGGGTAACCAGGAGG +
Preference number: 2 (lower is better)
Translates to: YMAYVLLAGLPCLASVGEIGVGL*EGVTRR
Trigger: CCTCCTGGTTACCCCCTCCCATAACCCTACCCCTAT...CTCTCCCACTGAGGCCAGACAAGGTAGCCCAGCTAGTAGAACATATGCCATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR TCA 90 bp AAAGAATTTAAGAAATTAAGCTGGTCAGTGGTAGCACACACCTTCAATCCCAACGGCTGGTCTACAGCGTaGGTTCCAGGACAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: KEFKKLSWSVVAHTFNPNGWSTA*VPGQPR
Trigger: CCTTGGCTGTCCTGGAACTCACGCTGTAGACCAGCC...GTTGGGATTGAAGGTGTGTGCTACCACTGACCAGCTTAATTTCTTAAATTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR GCA 90 bp AGAAGGAATAGGGGTAGGGTTATGGGAGGGGGTAACCAGGAGGGAAACAATGAAAGCCCTCACAGTCCTTaGTTTGTATTGAGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: RRNRGRVMGGGNQEGNNESPHSP*FVLSLF
Trigger: AAAGAGGCTCAATACAAAGCAAGGACTGTGAGGGCT...TTCATTGTTTCCCTCCTGGTTACCCCCTCCCATAACCCTACCCCTATTCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR TCA 90 bp TACATGGCATATGTTCTACTAGCTGGGCTACCTTGTCTGGCCTCAGTGGGAGAGCCAGGAGGGAAACAATaGATAGGATGTAAAGTGAAT +
Preference number: 2 (lower is better)
Translates to: YMAYVLLAGLPCLASVGEPGGKQ*IGCKVN
Trigger: ATTCACTTTACATCCTATTCATTGTTTCCCTCCTGG...CTCTCCCACTGAGGCCAGACAAGGTAGCCCAGCTAGTAGAACATATGCCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR GCA 90 bp CTATCCCAAAAGCTGTTGCCTTTACATGGCATATGTTCTACTAGCTGGGCTACCATTCCTACTCCAACTTaGGAGTTCCAATTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LSQKLLPLHGICSTSWATIPTPT*EFQFWE
Trigger: TTCCCAAAATTGGAACTCGCAAGTTGGAGTAGGAAT...GGTAGCCCAGCTAGTAGAACATATGCCATGTAAAGGCAACAGCTTTTGGGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR GCA 90 bp CTATCCCAAAAGCTGTTGCCTTTACATGGCATATGTTCTACTAGCTGGGCTACCAGTAAACAAACATCCTaGAGCAAAAATTCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: LSQKLLPLHGICSTSWATSKQTS*SKNSLV
Trigger: GACCAGGGAATTTTTGCTGCAGGATGTTTGTTTACT...GGTAGCCCAGCTAGTAGAACATATGCCATGTAAAGGCAACAGCTTTTGGGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR CAA 90 bp AACATGTTGGAGGATACCTTTATTCTGTCCTTACTCAATCTGTCTTaGCATTTCAAAGCCCTTTGGAGCTATCAAGTAAAGGGTCCCGTC +
Preference number: 2 (lower is better)
Translates to: NMLEDTFILSLLNLS*HFKALWSYQVKGPV
Trigger: GACGGGACCCTTTACTTGATAGCTCCAAAGGGCTTTGAAATGCAAAGACAGATTGAGTAAGGACAGAATAAAGGTATCCTCCAACATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGTACTGGTTGTATTTTaGTTTACAGCTTGTAGGTCT +
Preference number: 2 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPVLVVF*FTACRS
Trigger: AGACCTACAAGCTGTAAAGCAAAATACAACCAGTAC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR CAA 90 bp TTGCGAGTTCCAATTTTGGGAATGCCAATGTGTCAGCTAAACATGTaGGAGGATACCTTTATTCTGTCCTTACTCAATCTGTCTTTGCAT +
Preference number: 2 (lower is better)
Translates to: LRVPILGMPMCQLNM*EDTFILSLLNLSLH
Trigger: ATGCAAAGACAGATTGAGTAAGGACAGAATAAAGGTATCCTCCAACATGTTTAGCTGACACATTGGCATTCCCAAAATTGGAACTCGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR TCA 90 bp AAAGAATTTAAGAAATTAAGCTGGTCAGTGGTAGCACACACCTTCAATCCCAACGTCCTTGCTTTGTATTaGGCCTCTTTGTCAGTAAAC +
Preference number: 2 (lower is better)
Translates to: KEFKKLSWSVVAHTFNPNVLALY*ASLSVN
Trigger: GTTTACTGACAAAGAGGCTCAATACAAAGCAAGGAC...GTTGGGATTGAAGGTGTGTGCTACCACTGACCAGCTTAATTTCTTAAATTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR CCA 90 bp TATTATGATTTCCACCTTCTGCTCCTATTCCTACTCCAACTTGCGAGTTCCAATCATTTCAAAGCCCTTTaGAGCTATCAAGTAAAGGGT +
Preference number: 2 (lower is better)
Translates to: YYDFHLLLLFLLQLASSNHFKAL*SYQVKG
Trigger: ACCCTTTACTTGATAGCTCCAAAGGGCTTTGAAATG...ATTGGAACTCGCAAGTTGGAGTAGGAATAGGAGCAGAAGGTGGAAATCATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR TCA 90 bp CTTACTCAATCTGTCTTTGCATTTCAAAGCCCTTTGGAGCTATCAAGTAAAGGGAAGTTTAAATTCCAATaGCCCATAGGGTACAGAGAA +
Preference number: 2 (lower is better)
Translates to: LTQSVFAFQSPLELSSKGKFKFQ*PIGYRE
Trigger: TTCTCTGTACCCTATGGGTCATTGGAATTTAAACTT...CCCTTTACTTGATAGCTCCAAAGGGCTTTGAAATGCAAAGACAGATTGAGTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGTACTGGTTGTATTTTaGTTTACAGCTTGTAGGTCT +
Preference number: 2 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNVLVVF*FTACRS
Trigger: AGACCTACAAGCTGTAAAGCAAAATACAACCAGTAC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCAAAAATAGCAATTTGTaGAGTCAGTTTTCTGCCGAA +
Preference number: 2 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFKNSNL*SQFSAE
Trigger: TTCGGCAGAAAACTGACTCCACAAATTGCTATTTTT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR GCA 72 bp ACCCAAGATCATACATGGGCTGGACCTAGGCCTCCCTaGACATATGTAGCAGACATACAGCTTGGTCCGCAT +
Preference number: 3 (lower is better)
Translates to: TQDHTWAGPRPP*TYVADIQLGPH
Trigger: ATGCGGACCAAGCTGTATGTCTGCTACATATGTGCAGGGAGGCCTAGGTCCAGCCCATGTATGATCTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR TCA 72 bp TCAGTGGGAGAGGATGTGCCTAGCCTTATAGGAATTTaGTATACCAGGATGGGAGGGATCCCCAGGAAGACC +
Preference number: 3 (lower is better)
Translates to: SVGEDVPSLIGI*YTRMGGIPRKT
Trigger: GGTCTTCCTGGGGATCCCTCCCATCCTGGTATATCAAATTCCTATAAGGCTAGGCACATCCTCTCCCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR CAA 90 bp GAGACTGAACCACCAACCCAAGATCATACATGGGCTGGACCTAGGCCTCCCTGCTTACTCAATCTGTCTTaGCATTTCAAAGCCCTTTGG +
Preference number: 3 (lower is better)
Translates to: ETEPPTQDHTWAGPRPPCLLNLS*HFKALW
Trigger: CCAAAGGGCTTTGAAATGCAAAGACAGATTGAGTAA...GCAGGGAGGCCTAGGTCCAGCCCATGTATGATCTTGGGTTGGTGGTTCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR CCA 72 bp AAGCTGTTGCCTTTACATGGCATATGTTCTACTAGCTaGGCTACCTTGTCTGGCCTCAGTGGGAGAGGATGT +
Preference number: 3 (lower is better)
Translates to: KLLPLHGICSTS*ATLSGLSGRGC
Trigger: ACATCCTCTCCCACTGAGGCCAGACAAGGTAGCCCAGCTAGTAGAACATATGCCATGTAAAGGCAACAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR CAA 90 bp CTATCCCAAAAGCTGTTGCCTTTACATGGCATATGTTCTACTAGCTGGGCTACCTGTGGTTGCTGGGATTaGAACTCAGGACCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: LSQKLLPLHGICSTSWATCGCWD*NSGPLE
Trigger: TTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACA...GGTAGCCCAGCTAGTAGAACATATGCCATGTAAAGGCAACAGCTTTTGGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR CCA 72 bp TTCATTATAGGTGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCA +
Preference number: 3 (lower is better)
Translates to: FIIGGCEPPCGC*DLNSGPLEEQS
Trigger: TGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCTATAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR-3UTR CAA 90 bp AGAAGGAATAGGGGTAGGGTTATGGGAGGGGGTAACCAGGAGGGAAACAATGAATGTCAGCTAAACATGTaGGAGGATACCTTTATTCTG +
Preference number: 3 (lower is better)
Translates to: RRNRGRVMGGGNQEGNNECQLNM*EDTFIL
Trigger: CAGAATAAAGGTATCCTCCAACATGTTTAGCTGACA...TTCATTGTTTCCCTCCTGGTTACCCCCTCCCATAACCCTACCCCTATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR TCA 72 bp ATTCCCTGGTCTTCCACACACATGGGGAAGCTATTATaGTTTCCACCTTCTGCTCCTATTCCTACTCCAACT +
Preference number: 3 (lower is better)
Translates to: IPWSSTHMGKLL*FPPSAPIPTPT
Trigger: AGTTGGAGTAGGAATAGGAGCAGAAGGTGGAAATCATAATAGCTTCCCCATGTGTGTGGAAGACCAGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR GCA 72 bp TCAAGCAATCCAGTGTCTCCTGTACTGGTTGTATTTTaGTTTACAGCTTGTAGGTCTGCTTATGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: SSNPVSPVLVVF*FTACRSAYGGR
Trigger: CCTCCCACCATAAGCAGACCTACAAGCTGTAAAGCAAAATACAACCAGTACAGGAGACACTGGATTGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR TCA 72 bp TTAGCCTTCAAAGCCCTCACAGTCCTTGCTTTGTATTaGGCCTCTTTGTCAGTAAACAAACATCCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: LAFKALTVLALY*ASLSVNKHPAA
Trigger: TGCTGCAGGATGTTTGTTTACTGACAAAGAGGCTCAATACAAAGCAAGGACTGTGAGGGCTTTGAAGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR GCA 72 bp CACACACATGGGGAAGCTATTATGATTTCCACCTTCTaGTCCTATTCCTACTCCAACTTGCGAGTTCCAATT +
Preference number: 3 (lower is better)
Translates to: HTHGEAIMISTF*SYSYSNLRVPI
Trigger: AATTGGAACTCGCAAGTTGGAGTAGGAATAGGAGCAGAAGGTGGAAATCATAATAGCTTCCCCATGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR GCA 72 bp TTTGTATTGAGCCTCTTTGTCAGTAAACAAACATCCTaGAGCAAAAATTCCCTGGTCTTCCACACACATGGG +
Preference number: 3 (lower is better)
Translates to: FVLSLFVSKQTS*SKNSLVFHTHG
Trigger: CCCATGTGTGTGGAAGACCAGGGAATTTTTGCTGCAGGATGTTTGTTTACTGACAAAGAGGCTCAATACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR CCA 72 bp GTTGCAGTAGAAGGAAATTATGTCCACAGTACACCGTaGAACACTACACTGCGCAGCTTATTTATTCTCATG +
Preference number: 3 (lower is better)
Translates to: VAVEGNYVHSTP*NTTLRSLFILM
Trigger: CATGAGAATAAATAAGCTGCGCAGTGTAGTGTTCCACGGTGTACTGTGGACATAATTTCCTTCTACTGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR CCA 72 bp AGGCCATTTTATTTAGTTATCACCAGGGTCCCATTATaGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTTT +
Preference number: 3 (lower is better)
Translates to: RPFYLVITRVPL*PVGGSIAKVYF
Trigger: AAAATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATAAAATGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
3UTR-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGAGGCTCTACCACCTTaGTCAAAATCCTTTTTAAGA +
Preference number: 3 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPEALPP*SKSFLR
Trigger: TCTTAAAAAGGATTTTGACAAAGGTGGTAGAGCCTC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTGTCTCCTGTACTGGTaGTATTTTGCTTTACAGCTT +
Preference number: 3 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPCLLYW*YFALQL
Trigger: AAGCTGTAAAGCAAAATACAACCAGTACAGGAGACA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR GCA 72 bp GGAGTCAGTTTTCTGCCGAAAATGAAATTTCAGTGTTaGAGTAGAAGGAAATTATGTCCACAGTACACCGTG +
Preference number: 3 (lower is better)
Translates to: GVSFLPKMKFQC*SRRKLCPQYTV
Trigger: CACGGTGTACTGTGGACATAATTTCCTTCTACTGCAACACTGAAATTTCATTTTCGGCAGAAAACTGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTGTCTCCTGTACTGGTaGTATTTTGCTTTACAGCTT +
Preference number: 3 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNCLLYW*YFALQL
Trigger: AAGCTGTAAAGCAAAATACAACCAGTACAGGAGACA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp GAGACTGAACCACCAACCCAAGATCATACATGGGCTGGACCTAGGCCTCCCTGCGGAACTCTCCAGCAGTaGAGTCTGCGGATACATCCG +
Preference number: 4 (lower is better)
Translates to: ETEPPTQDHTWAGPRPPCGTLQQ*SLRIHP
Trigger: CGGATGTATCCGCAGACTGCACTGCTGGAGAGTTCC...GCAGGGAGGCCTAGGTCCAGCCCATGTATGATCTTGGGTTGGTGGTTCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CCA 90 bp GAGACTGAACCACCAACCCAAGATCATACATGGGCTGGACCTAGGCCTCCCTGCAAGACATGGTCCTTGTaGGGCTCACTCCCAATGGCC +
Preference number: 4 (lower is better)
Translates to: ETEPPTQDHTWAGPRPPCKTWSL*GSLPMA
Trigger: GGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTT...GCAGGGAGGCCTAGGTCCAGCCCATGTATGATCTTGGGTTGGTGGTTCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR TCA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTAGAGCCCGTCCGTCGGTaGACACGATGGCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVEPVRR*TRWLLW
Trigger: CCAGAGTAGCCATCGTGTTCACCGACGGACGGGCTC...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp GAGACTGAACCACCAACCCAAGATCATACATGGGCTGGACCTAGGCCTCCCTGCAGGACAAGGAAGAGCTaGCCAAGCATCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: ETEPPTQDHTWAGPRPPCRTRKS*PSISKH
Trigger: GTGCTTGCTGATGCTTGGGCAGCTCTTCCTTGTCCT...GCAGGGAGGCCTAGGTCCAGCCCATGTATGATCTTGGGTTGGTGGTTCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CCA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATCCTGCTGTGCACAGTaGTCCACCCGGCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVSCCAQ*STRLQV
Trigger: GACCTGCAGCCGGGTGGACCACTGTGCACAGCAGGA...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTACATCCTCAGCCAGCCTaGACCCCTCCAGACACTTGC +
Preference number: 4 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVHPQPA*TPPDTC
Trigger: GCAAGTGTCTGGAGGGGTTCAGGCTGGCTGAGGATG...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp TTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGACGAGCCAGGTGTGTTaGGGCAGAAGTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: LVITRVPLWPVGGSIAKVTSQVC*GRSGHS
Trigger: ACTGTGCCCACTTCTGCCTCAACACACCTGGCTCGT...CACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVSQPWS*CAQWST
Trigger: GGTGGACCACTGTGCACAGCAGGACCATGGCTGTGA...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATGTGTTCAGGCACAGCTaGTCACAGCCATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYVFRHS*SQPWSC
Trigger: GCAGGACCATGGCTGTGAGCAGCTGTGCCTGAACAC...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp TACATGGCATATGTTCTACTAGCTGGGCTACCTTGTCTGGCCTCAGTGGGAGAGTGGCAAGCCCTGTCATaGTGCCAGTGGATAGATGCC +
Preference number: 4 (lower is better)
Translates to: YMAYVLLAGLPCLASVGEWQALS*CQWIDA
Trigger: GGCATCTATCCACTGGCACCATGACAGGGCTTGCCA...CTCTCCCACTGAGGCCAGACAAGGTAGCCCAGCTAGTAGAACATATGCCATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CCA 90 bp CTATCCCAAAAGCTGTTGCCTTTACATGGCATATGTTCTACTAGCTGGGCTACCCTGTGTTCCGGGCCTTaGCAGCTACCTCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: LSQKLLPLHGICSTSWATLCSGP*QLPQPP
Trigger: CGGTGGCTGAGGTAGCTGCCAAGGCCCGGAACACAG...GGTAGCCCAGCTAGTAGAACATATGCCATGTAAAGGCAACAGCTTTTGGGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGCTGTGTTCCGGGCCTTaGCAGCTACCTCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKLCSGP*QLPQPP
Trigger: CGGTGGCTGAGGTAGCTGCCAAGGCCCGGAACACAG...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp AGCTGTTGCCTTTACATGGCATATGTTCTACTAGCTGGGCTACCTTGTCTGGCCGCCACCAGGAAGACATaGTCCTTGTGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: SCCLYMAYVLLAGLPCLAATRKT*SLWGSL
Trigger: GAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGC...GGCCAGACAAGGTAGCCCAGCTAGTAGAACATATGCCATGTAAAGGCAACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CCA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATGCCACCAGGAAGACATaGTCCTTGTGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYATRKT*SLWGSL
Trigger: GAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGC...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp TACATGGCATATGTTCTACTAGCTGGGCTACCTTGTCTGGCCTCAGTGGGAGAGGGGAGAACTCGTTCTTaGCCGTGCTGCCATATTGGA +
Preference number: 4 (lower is better)
Translates to: YMAYVLLAGLPCLASVGEGRTRS*PCCHIG
Trigger: TCCAATATGGCAGCACGGTCAAGAACGAGTTCTCCC...CTCTCCCACTGAGGCCAGACAAGGTAGCCCAGCTAGTAGAACATATGCCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR GCA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTAGGAACTCTCCAGCAGTaGAGTCTGCGGATACATCCG +
Preference number: 4 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVGTLQQ*SLRIHP
Trigger: CGGATGTATCCGCAGACTGCACTGCTGGAGAGTTCC...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGCCATGGTCCTGCTGTaGACAGTGGTCCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPAMVLL*TVVHPA
Trigger: AGCCGGGTGGACCACTGTGCACAGCAGGACCATGGC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp TTTTATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCGCCATGGTCCTGCTGTaGACAGTGGTCCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: FYLVITRVPLWPVGGSIAAMVLL*TVVHPA
Trigger: AGCCGGGTGGACCACTGTGCACAGCAGGACCATGGC...GGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATCTCTCTGCCGTCAACTaGGAGGACAAGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYLSAVN*EDKEEL
Trigger: CAGCTCTTCCTTGTCCTCCCAGTTGACGGCAGAGAG...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCTGTGTTCCGGGCCTTaGCAGCTACCTCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPLCSGP*QLPQPP
Trigger: CGGTGGCTGAGGTAGCTGCCAAGGCCCGGAACACAG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp TTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGAAGACATGGTCCTTGTaGGGCTCACTCCCAATGGCC +
Preference number: 4 (lower is better)
Translates to: LVITRVPLWPVGGSIAKVKTWSL*GSLPMA
Trigger: GGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTT...CACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTCCTGCTGTGCACAGTaGTCCACCCGGCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPSCCAQ*STRLQV
Trigger: GACCTGCAGCCGGGTGGACCACTGTGCACAGCAGGA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTCAGCCACCGAGTCCTaGGGCCTCCCATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPSATES*GLPSVT
Trigger: TGTGACTGATGGGAGGCCTCAGGACTCGGTGGCTGA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp TTTTATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCTCAGCCACCGAGTCCTaGGGCCTCCCATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: FYLVITRVPLWPVGGSIASATES*GLPSVT
Trigger: TGTGACTGATGGGAGGCCTCAGGACTCGGTGGCTGA...GGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGTCGCTTCGGAGCACATaGCCCTCAGGACATTGGCAG +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKSLRST*PSGHWQ
Trigger: CTGCCAATGTCCTGAGGGTCATGTGCTCCGAAGCGA...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCATCCTCAGCCAGCCTaGACCCCTCCAGACACTTGC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPHPQPA*TPPDTC
Trigger: GCAAGTGTCTGGAGGGGTTCAGGCTGGCTGAGGATG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTTTCTTCATTTCCTTGGCTaGGCTGAAGCCCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ITRVPLWPVGGSIAKVYFLHFLG*AEAPQG
Trigger: ACCCTGAGGGGCTTCAGCTCAGCCAAGGAAATGAAG...AAAATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp AGAAGGAATAGGGGTAGGGTTATGGGAGGGGGTAACCAGGAGGGAAACAATGAACAAGCCCTGTCATGGTaGCAGTGGATAGATGCCTCA +
Preference number: 4 (lower is better)
Translates to: RRNRGRVMGGGNQEGNNEQALSW*QWIDAS
Trigger: TGAGGCATCTATCCACTGGCACCATGACAGGGCTTG...TTCATTGTTTCCCTCCTGGTTACCCCCTCCCATAACCCTACCCCTATTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR GCA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTACAAGCCCTGTCATGGTaGCAGTGGATAGATGCCTCA +
Preference number: 4 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVQALSW*QWIDAS
Trigger: TGAGGCATCTATCCACTGGCACCATGACAGGGCTTG...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATCCACACGAGCAGCTTTaGGGGAAACTGCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYPHEQL*GKLPRN
Trigger: ATTCCTTGGCAGTTTCCCCCAAAGCTGCTCGTGTGG...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTGGCTCAGGTTCTGTTaGCTGGTGGGCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPWLRFC*LVGLLW
Trigger: CCACAGCAGGCCCACCAGCCAACAGAACCTGAGCCA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTTTGGGAGAACTCGTTCTTaGCCGTGCTGCCATATTGGA +
Preference number: 4 (lower is better)
Translates to: ITRVPLWPVGGSIAKVYFGRTRS*PCCHIG
Trigger: TCCAATATGGCAGCACGGTCAAGAACGAGTTCTCCC...AAAATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp ATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTTTTGTCTGGATTTAGCATaGAGCCTTTCAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ITRVPLWPVGGSIAKVYFCLDLA*SLSGSG
Trigger: GCCGCTGCCTGAAAGGCTTCATGCTAAATCCAGACA...AAAATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTCGCTTCGGAGCACATaGCCCTCAGGACATTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPSLRST*PSGHWQ
Trigger: CTGCCAATGTCCTGAGGGTCATGTGCTCCGAAGCGA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGAGCCCGTCCGTCGGTaGACACGATGGCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNEPVRR*TRWLLW
Trigger: CCAGAGTAGCCATCGTGTTCACCGACGGACGGGCTC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp TTTTATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCTCAGAGACATCATCCTaGGCCCGTCCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: FYLVITRVPLWPVGGSIASETSS*ARPSVN
Trigger: GTTCACCGACGGACGGGCTCAGGATGATGTCTCTGA...GGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCAGGTCCCATGCTGCTaGGTCCTGTCTTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPQVPCC*VLSSTR
Trigger: TCTGGTGGAAGACAGGACTCAGCAGCATGGGACCTG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGCCATGGTCCTGCTGTaGACAGTGGTCCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNAMVLL*TVVHPA
Trigger: AGCCGGGTGGACCACTGTGCACAGCAGGACCATGGC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPSQPWS*CAQWST
Trigger: GGTGGACCACTGTGCACAGCAGGACCATGGCTGTGA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTACATGCTGGGTTGACTTaGAGACATTCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVHAGLT*RHSSSC
Trigger: GCAGGAGGAAGAATGTCTGCAAGTCAACCCAGCATG...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGACCTGTGTGGAATACTaGAGCAGCCCCACACGAGCA +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKTCVEY*SSPTRA
Trigger: TGCTCGTGTGGGGCTGCTGCAGTATTCCACACAGGT...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGTTGGCTGGTGGGCCTaGTGTGGCAGGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNVGWWA*CGRSHA
Trigger: AGCATGGGACCTGCCACAGCAGGCCCACCAGCCAAC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGTGGCAAGCCCTGTCATaGTGCCAGTGGATAGATGCC +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKWQALS*CQWIDA
Trigger: GGCATCTATCCACTGGCACCATGACAGGGCTTGCCA...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCTGTGTTCCGGGCCTTaGCAGCTACCTCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNLCSGP*QLPQPP
Trigger: CGGTGGCTGAGGTAGCTGCCAAGGCCCGGAACACAG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGCCACCAGGAAGACATaGTCCTTGTGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPATRKT*SLWGSL
Trigger: GAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTCAGCCACCGAGTCCTaGGGCCTCCCATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNSATES*GLPSVT
Trigger: TGTGACTGATGGGAGGCCTCAGGACTCGGTGGCTGA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp TATTATGATTTCCACCTTCTGCTCCTATTCCTACTCCAACTTGCGAGTTCCAATTCAGCCACCGAGTCCTaGGGCCTCCCATCAGTCACA +
Preference number: 4 (lower is better)
Translates to: YYDFHLLLLFLLQLASSNSATES*GLPSVT
Trigger: TGTGACTGATGGGAGGCCTCAGGACTCGGTGGCTGA...ATTGGAACTCGCAAGTTGGAGTAGGAATAGGAGCAGAAGGTGGAAATCATAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR TCA 90 bp TTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGACATCCATGATTTTCTaGGGCACAGTAGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LVITRVPLWPVGGSIAKVTSMIF*GTVVHS
Trigger: GCTGTGGACTACTGTGCCTCAGAAAATCATGGATGT...CACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATACCCCTCAAAGCACTaGCACACGAAAGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVYPSKH*HTKESS
Trigger: TGAAGACTCTTTCGTGTGTCAGTGCTTTGAGGGGTA...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCTTCATTTCCTTGGCTaGGCTGAAGCCCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPLHFLG*AEAPQG
Trigger: ACCCTGAGGGGCTTCAGCTCAGCCAAGGAAATGAAG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGAGGACAAGGAAGAGCTaGCCAAGCATCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKRTRKS*PSISKH
Trigger: GTGCTTGCTGATGCTTGGGCAGCTCTTCCTTGTCCT...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGGAACTCTCCAGCAGTaGAGTCTGCGGATACATCCG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPGTLQQ*SLRIHP
Trigger: CGGATGTATCCGCAGACTGCACTGCTGGAGAGTTCC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATGATGAACACCAGATCTaGCCGCTTATTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYDEHQI*PLILTG
Trigger: TCCTGTGAGAATAAGCGGGCAGATCTGGTGTTCATC...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTAGCCTGGTTTGTTCAGTaGACAGTAGTTGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVAWFVQ*TVVDPS
Trigger: CGAAGGATCAACTACTGTGCACTGAACAAACCAGGC...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTAGTGTTCACACACTCATaGTCACAGCCTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVVFTHS*SQPGLF
Trigger: GAACAAACCAGGCTGTGAGCATGAGTGTGTGAACAC...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp TTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTTGTTCACACACATGTaGTCACAGCCATGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LVITRVPLWPVGGSIAKVLFTHM*SQPCWV
Trigger: AACCCAGCATGGCTGTGAGCACATGTGTGTGAACAA...CACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCACCTGTGTGGAATACTaGAGCAGCCCCACACGAGCA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPTCVEY*SSPTRA
Trigger: TGCTCGTGTGGGGCTGCTGCAGTATTCCACACAGGT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCTCTCTGCCGTCAACTaGGAGGACAAGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPLSAVN*EDKEEL
Trigger: CAGCTCTTCCTTGTCCTCCCAGTTGACGGCAGAGAG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTGGCAAGCCCTGTCATaGTGCCAGTGGATAGATGCC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPWQALS*CQWIDA
Trigger: GGCATCTATCCACTGGCACCATGACAGGGCTTGCCA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATAGGTGCTCACATCCATaGTTAACATCCTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYRCSHP*LTSWQT
Trigger: TGTCTGCCAGGATGTTAACCATGGATGTGAGCACCT...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTCTATGTTGCACTGTTaGCTGGTGGGCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPSMLHC*LVGLLW
Trigger: CCACAGCAGGCCCACCAGCCAACAGTGCAACATAGA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022947.7
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTCAGGTTCTGTTGGCTaGTGGGCCTGCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNSGSVG*WACCGR
Trigger: CCTGCCACAGCAGGCCCACCAGCCAACAGAACCTGA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGGGAGAACTCGTTCTTaGCCGTGCTGCCATATTGGA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPGRTRS*PCCHIG
Trigger: TCCAATATGGCAGCACGGTCAAGAACGAGTTCTCCC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATACGAGCCAGGTGTGTTaGGGCAGAAGTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNTSQVC*GRSGHS
Trigger: ACTGTGCCCACTTCTGCCTCAACACACCTGGCTCGT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp TTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGAGGATTTGTCTGTGTTaGCGCAGGAGTATTCACAAC +
Preference number: 4 (lower is better)
Translates to: LVITRVPLWPVGGSIAKVRICLC*RRSIHN
Trigger: GTTGTGAATACTCCTGCGTCAACACAGACAAATCCT...CACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGACAGCCATGCTGGGTTaGCTTGCAGACATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKTAMLG*LADILP
Trigger: AGGAAGAATGTCTGCAAGTCAACCCAGCATGGCTGT...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTCAGAGACATCATCCTaGGCCCGTCCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNSETSS*ARPSVN
Trigger: GTTCACCGACGGACGGGCTCAGGATGATGTCTCTGA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCAGGACAAGGAAGAGCTaGCCAAGCATCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPRTRKS*PSISKH
Trigger: GTGCTTGCTGATGCTTGGGCAGCTCTTCCTTGTCCT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCAAGCCCTGTCATGGTaGCAGTGGATAGATGCCTCA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPQALSW*QWIDAS
Trigger: TGAGGCATCTATCCACTGGCACCATGACAGGGCTTG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNSQPWS*CAQWST
Trigger: GGTGGACCACTGTGCACAGCAGGACCATGGCTGTGA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGTGTTCAGGCACAGCTaGTCACAGCCATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNVFRHS*SQPWSC
Trigger: GCAGGACCATGGCTGTGAGCAGCTGTGCCTGAACAC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGCATCTCTTGCAGTaGTTTCCATCCTCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKVHLLQ*FPSSAR
Trigger: CCTAGCTGAGGATGGAAAGCACTGCAAGAGATGCAC...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp ATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTTTCTTCAGTGCATCTCTTaGAGTGCTTTCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: ITRVPLWPVGGSIAKVYFLQCIS*SAFHPQ
Trigger: CTGAGGATGGAAAGCACTGCAAGAGATGCACTGAAG...AAAATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGCCACCAGGAAGACATaGTCCTTGTGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNATRKT*SLWGSL
Trigger: GAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGAGCTGCTCACAACCATaGTCCTCTGTGGCACACAAA +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKSCSQP*SSVAHK
Trigger: TTTGTGTGCCACAGAGGACCATGGTTGTGAGCAGCT...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNSCSQP*SCCAQW
Trigger: CCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGAAGCCTTCTGAGCACTaGCAGACAAAGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKKPSEH*QTKDSS
Trigger: AGAGGAGTCCTTTGTCTGCCAGTGCTCAGAAGGCTT...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATAAAGACCAGGTCAATTaGGCCTTCAGTGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYKDQVN*AFSASL
Trigger: AAGAGATGCACTGAAGGCCCAATTGACCTGGTCTTT...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATCTGGCCCCTTCTACTTaGGTAAAACTTCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYLAPST*VKLLSN
Trigger: GTTTGAGAGAAGTTTTACCCAAGTAGAAGGGGCCAG...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCAGGACTCAATCTGGCTaGAATTGGCCACCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPRTQSG*NWPPGR
Trigger: TCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTTTTTTGTTCTGGAACACTaGGGTCAAGGACTCAATCTG +
Preference number: 4 (lower is better)
Translates to: ITRVPLWPVGGSIAKVYFFVLEH*GQGLNL
Trigger: CAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAA...AAAATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGAT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCACAGCCATGCTGGGTTaGCTTGCAGACATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPTAMLG*LADILP
Trigger: AGGAAGAATGTCTGCAAGTCAACCCAGCATGGCTGT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGGAACTCTCCAGCAGTaGAGTCTGCGGATACATCCG +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNGTLQQ*SLRIHP
Trigger: CGGATGTATCCGCAGACTGCACTGCTGGAGAGTTCC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGCCATGGTCCTGCTGTaGACAGTGGTCCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFAMVLL*TVVHPA
Trigger: AGCCGGGTGGACCACTGTGCACAGCAGGACCATGGC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCATGCTGGGTTGACTTaGAGACATTCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPHAGLT*RHSSSC
Trigger: GCAGGAGGAAGAATGTCTGCAAGTCAACCCAGCATG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATACCTGTGTGGAATACTaGAGCAGCCCCACACGAGCA +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNTCVEY*SSPTRA
Trigger: TGCTCGTGTGGGGCTGCTGCAGTATTCCACACAGGT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGTTGGCTGGTGGGCCTaGTGTGGCAGGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFVGWWA*CGRSHA
Trigger: AGCATGGGACCTGCCACAGCAGGCCCACCAGCCAAC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCTCTCTGCCGTCAACTaGGAGGACAAGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNLSAVN*EDKEEL
Trigger: CAGCTCTTCCTTGTCCTCCCAGTTGACGGCAGAGAG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTGGCAAGCCCTGTCATaGTGCCAGTGGATAGATGCC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNWQALS*CQWIDA
Trigger: GGCATCTATCCACTGGCACCATGACAGGGCTTGCCA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATAAGACATGGTCCTTGTaGGGCTCACTCCCAATGGCC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNKTWSL*GSLPMA
Trigger: GGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTCCTGCTGTGCACAGTaGTCCACCCGGCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFSCCAQ*STRLQV
Trigger: GACCTGCAGCCGGGTGGACCACTGTGCACAGCAGGA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp GTGGCAGTATTGCCAAGGTGTATTTTTAATGGCTTAGCCAACAATTATTGGTTGAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: VAVLPRCIFNGLANNYWLSCSQP*SCCAQW
Trigger: CCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCT...CAACCAATAATTGTTGGCTAAGCCATTAAAAATACACCTTGGCAATACTGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTGGCCTTGGCTTTACTaGCCCACTCAGAGACATCAT +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPWPWLY*PTQRHH
Trigger: ATGATGTCTCTGAGTGGGCCAGTAAAGCCAAGGCCA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGATTCTGCAAGTCTTCTaGTCCGTGCTGAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKILQVF*SVLRMY
Trigger: GTACATTCTCAGCACGGATCAGAAGACTTGCAGAAT...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCACATCCATGATTTTCTaGGGCACAGTAGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPTSMIF*GTVVHS
Trigger: GCTGTGGACTACTGTGCCTCAGAAAATCATGGATGT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTTTCTGACATCCGTGATTTaGAGAGGCACAATAGTCAAT +
Preference number: 4 (lower is better)
Translates to: ITRVPLWPVGGSIAKVYFLTSVI*RGTIVN
Trigger: ATTGACTATTGTGCCTCTTCAAATCACGGATGTCAG...AAAATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTGTCTGGATTTAGCATaGAGCCTTTCAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNCLDLA*SLSGSG
Trigger: GCCGCTGCCTGAAAGGCTTCATGCTAAATCCAGACA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTTTTTCACTGCTTACACATaGATGTTCACAACCATGGTC +
Preference number: 4 (lower is better)
Translates to: ITRVPLWPVGGSIAKVYFFTAYT*MFTTMV
Trigger: GACCATGGTTGTGAACATTCATGTGTAAGCAGTGAA...AAAATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTACCCCTCAAAGCACTaGCACACGAAAGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPYPSKH*HTKESS
Trigger: TGAAGACTCTTTCGTGTGTCAGTGCTTTGAGGGGTA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCATCCTCAGCCAGCCTaGACCCCTCCAGACACTTGC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFHPQPA*TPPDTC
Trigger: GCAAGTGTCTGGAGGGGTTCAGGCTGGCTGAGGATG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATAGGACAAGGAAGAGCTaGCCAAGCATCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNRTRKS*PSISKH
Trigger: GTGCTTGCTGATGCTTGGGCAGCTCTTCCTTGTCCT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGATGAACACCAGATCTaGCCGCTTATTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPDEHQI*PLILTG
Trigger: TCCTGTGAGAATAAGCGGGCAGATCTGGTGTTCATC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCAAGCCCTGTCATGGTaGCAGTGGATAGATGCCTCA +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNQALSW*QWIDAS
Trigger: TGAGGCATCTATCCACTGGCACCATGACAGGGCTTG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGACAAATCCTGGATTCTaGAAGTCTTCTGATCCGTGC +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKTNPGF*KSSDPC
Trigger: GCACGGATCAGAAGACTTGCAGAATCCAGGATTTGT...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGTGTTCACACACTCATaGTCACAGCCTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPVFTHS*SQPGLF
Trigger: GAACAAACCAGGCTGTGAGCATGAGTGTGTGAACAC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp TTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGCGAAAGAGTCTTCACTaGTTACACATGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: LVITRVPLWPVGGSIAKVRKSLH*LHMNVH
Trigger: GTGAACATTCATGTGTAAGCAGTGAAGACTCTTTCG...CACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCTTCAGTGCATCTCTTaGAGTGCTTTCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPLQCIS*SAFHPQ
Trigger: CTGAGGATGGAAAGCACTGCAAGAGATGCACTGAAG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp CTATCCCAAAAGCTGTTGCCTTTACATGGCATATGTTCTACTAGCTGGGCTACCGAGGCACAGACTTACTaGACAGTTTGTTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: LSQKLLPLHGICSTSWATEAQTY*TVCSGT
Trigger: TGTTCCAGAACAAACTGTGCAGTAAGTCTGTGCCTC...GGTAGCCCAGCTAGTAGAACATATGCCATGTAAAGGCAACAGCTTTTGGGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CCA 90 bp AGCTATCAAGTAAAGGGTCCCGTCATTAAGCCTGATGATCTAAGTTTAAATTCCCTCTCTGCCGTCAACTaGGAGGACAAGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SYQVKGPVIKPDDLSLNSLSAVN*EDKEEL
Trigger: CAGCTCTTCCTTGTCCTCCCAGTTGACGGCAGAGAG...GGAATTTAAACTTAGATCATCAGGCTTAATGACGGGACCCTTTACTTGATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CCA 90 bp TTTTATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCCTGTCATGGTGCCAGTaGATAGATGCCTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: FYLVITRVPLWPVGGSIALSWCQ*IDASFS
Trigger: AGAGAATGAGGCATCTATCCACTGGCACCATGACAG...GGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCTCATGCTCACAGCCTaGTTTGTTCAGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPLMLTA*FVQCTV
Trigger: TACTGTGCACTGAACAAACCAGGCTGTGAGCATGAG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp TTTTATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCCTCATGCTCACAGCCTaGTTTGTTCAGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: FYLVITRVPLWPVGGSIALMLTA*FVQCTV
Trigger: TACTGTGCACTGAACAAACCAGGCTGTGAGCATGAG...GGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGAATGTTCACAACCATaGTCCCCCAAAGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPECSQP*SPKAQE
Trigger: CTCTTGTGCTTTGGGGGACCATGGTTGTGAACATTC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCAGGTGCTCACATCCATaGTTAACATCCTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPRCSHP*LTSWQT
Trigger: TGTCTGCCAGGATGTTAACCATGGATGTGAGCACCT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCCACACGAGCAGCTTTaGGGGAAACTGCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNPHEQL*GKLPRN
Trigger: ATTCCTTGGCAGTTTCCCCCAAAGCTGCTCGTGTGG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGTAGTTCTTCCTCAATaGCTTTTCCTACCCCAACGG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPVVLPQ*LFLPQR
Trigger: CCGTTGGGGTAGGAAAAGCCATTGAGGAAGAACTAC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTGTTGCACTGTTGGCTaGTGGGCCTGCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFCCTVG*WACCGR
Trigger: CCTGCCACAGCAGGCCCACCAGCCAACAGTGCAACA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022947.7
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGATCTTTATGGTGACTaGCTCAGGTTCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPDLYGD*LRFCWL
Trigger: CAGCCAACAGAACCTGAGCCAGTCACCATAAAGATC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCAGTCACAATCATTATaGTGCGTGGCACATTTTCCC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPQSQSL*CVAHFP
Trigger: GGGAAAATGTGCCACGCATCATAATGATTGTGACTG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATAGGACTCAATCTGGCTaGAATTGGCCACCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNRTQSG*NWPPGR
Trigger: TCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTTTGTTCTGGAACACTaGGGTCAAGGACTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPFVLEH*GQGLNL
Trigger: CAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCACGAGCCAGGTGTGTTaGGGCAGAAGTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFTSQVC*GRSGHS
Trigger: ACTGTGCCCACTTCTGCCTCAACACACCTGGCTCGT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCAGGATTTGTCTGTGTTaGCGCAGGAGTATTCACAAC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPRICLC*RRSIHN
Trigger: GTTGTGAATACTCCTGCGTCAACACAGACAAATCCT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATACAGCCATGCTGGGTTaGCTTGCAGACATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNTAMLG*LADILP
Trigger: AGGAAGAATGTCTGCAAGTCAACCCAGCATGGCTGT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTCAGAGACATCATCCTaGGCCCGTCCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFSETSS*ARPSVN
Trigger: GTTCACCGACGGACGGGCTCAGGATGATGTCTCTGA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCAGGTCCCATGCTGCTaGGTCCTGTCTTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFQVPCC*VLSSTR
Trigger: TCTGGTGGAAGACAGGACTCAGCAGCATGGGACCTG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFSQPWS*CAQWST
Trigger: GGTGGACCACTGTGCACAGCAGGACCATGGCTGTGA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGTGTTCAGGCACAGCTaGTCACAGCCATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFVFRHS*SQPWSC
Trigger: GCAGGACCATGGCTGTGAGCAGCTGTGCCTGAACAC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATAGCTGCTCACAACCATaGTCCTCTGTGGCACACAAA +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNSCSQP*SSVAHK
Trigger: TTTGTGTGCCACAGAGGACCATGGTTGTGAGCAGCT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFSCSQP*SCCAQW
Trigger: CCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATAAGCCTTCTGAGCACTaGCAGACAAAGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNKPSEH*QTKDSS
Trigger: AGAGGAGTCCTTTGTCTGCCAGTGCTCAGAAGGCTT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCAAAGACCAGGTCAATTaGGCCTTCAGTGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPKDQVN*AFSASL
Trigger: AAGAGATGCACTGAAGGCCCAATTGACCTGGTCTTT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCTGGCCCCTTCTACTTaGGTAAAACTTCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPLAPST*VKLLSN
Trigger: GTTTGAGAGAAGTTTTACCCAAGTAGAAGGGGCCAG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTGGCCTTGGCTTTACTaGCCCACTCAGAGACATCAT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNWPWLY*PTQRHH
Trigger: ATGATGTCTCTGAGTGGGCCAGTAAAGCCAAGGCCA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR CAA 72 bp TGCTCCTATTCCTACTCCAACTTGCGAGTTCCAATTTaGGGAATGCCAATGTGTCAGCTAAACATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CSYSYSNLRVPI*GMPMCQLNMLE
Trigger: CTCCAACATGTTTAGCTGACACATTGGCATTCCCAAAATTGGAACTCGCAAGTTGGAGTAGGAATAGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
3UTR CAA 72 bp ATTAGCCTTCAAAGCCCTCACAGTCCTTGCTTTGTATaGAGCCTCTTTGTCAGTAAACAAACATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ISLQSPHSPCFV*SLFVSKQTSCS
Trigger: GCTGCAGGATGTTTGTTTACTGACAAAGAGGCTCAATACAAAGCAAGGACTGTGAGGGCTTTGAAGGCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR TCA 90 bp AGCTATCAAGTAAAGGGTCCCGTCATTAAGCCTGATGATCTAAGTTTAAATTCCAGGACTCAATCTGGCTaGAATTGGCCACCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SYQVKGPVIKPDDLSLNSRTQSG*NWPPGR
Trigger: TCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCT...GGAATTTAAACTTAGATCATCAGGCTTAATGACGGGACCCTTTACTTGATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR TCA 90 bp GTGGCAGTATTGCCAAGGTGTATTTTTAATGGCTTAGCCAACAATTATTGGTTGAGGACTCAATCTGGCTaGAATTGGCCACCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VAVLPRCIFNGLANNYWLRTQSG*NWPPGR
Trigger: TCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCT...CAACCAATAATTGTTGGCTAAGCCATTAAAAATACACCTTGGCAATACTGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR TCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTTCACTGCTTACACATaGATGTTCACAACCATGGTC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPFTAYT*MFTTMV
Trigger: GACCATGGTTGTGAACATTCATGTGTAAGCAGTGAA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTACCCCTCAAAGCACTaGCACACGAAAGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNYPSKH*HTKESS
Trigger: TGAAGACTCTTTCGTGTGTCAGTGCTTTGAGGGGTA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCTTCATTTCCTTGGCTaGGCTGAAGCCCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFLHFLG*AEAPQG
Trigger: ACCCTGAGGGGCTTCAGCTCAGCCAAGGAAATGAAG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AAGTGCACTGTAGCTGACTTCAGATGCACCAGAATAGGTCATCAGATTTCATTAGGCCTTAAAGACAAATaGGGCACAGACTTACTGCAC +
Preference number: 4 (lower is better)
Translates to: KCTVADFRCTRIGHQISLGLKDK*GTDLLH
Trigger: GTGCAGTAAGTCTGTGCCTCATTTGTCTTTAAGGCC...TAATGAAATCTGATGACCTATTCTGGTGCATCTGAAGTCAGCTACAGTGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGGAACTCTCCAGCAGTaGAGTCTGCGGATACATCCG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFGTLQQ*SLRIHP
Trigger: CGGATGTATCCGCAGACTGCACTGCTGGAGAGTTCC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGATGAACACCAGATCTaGCCGCTTATTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNDEHQI*PLILTG
Trigger: TCCTGTGAGAATAAGCGGGCAGATCTGGTGTTCATC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGCCTGGTTTGTTCAGTaGACAGTAGTTGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNAWFVQ*TVVDPS
Trigger: CGAAGGATCAACTACTGTGCACTGAACAAACCAGGC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTTGTTCACACACATGTaGTCACAGCCATGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNLFTHM*SQPCWV
Trigger: AACCCAGCATGGCTGTGAGCACATGTGTGTGAACAA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCTTCAGTGCATCTCTTaGAGTGCTTTCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNLQCIS*SAFHPQ
Trigger: CTGAGGATGGAAAGCACTGCAAGAGATGCACTGAAG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGATTCCAGTGACAAAGTaGTTCACAGTCTCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKIPVTK*FTVSKF
Trigger: GAACTTTGAGACTGTGAAGCACTTTGTCACTGGAAT...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCTGTCATGGTGCCAGTaGATAGATGCCTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNLSWCQ*IDASFS
Trigger: AGAGAATGAGGCATCTATCCACTGGCACCATGACAG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTTACTCAATCTGTCTTTGCATTTCAAAGCCCTTTGGAGCTATCAAGTAAAGGGCTGTCATGGTGCCAGTaGATAGATGCCTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: LTQSVFAFQSPLELSSKGLSWCQ*IDASFS
Trigger: AGAGAATGAGGCATCTATCCACTGGCACCATGACAG...CCCTTTACTTGATAGCTCCAAAGGGCTTTGAAATGCAAAGACAGATTGAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCAAGACATGGTCCTTGTaGGGCTCACTCCCAATGGCC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFKTWSL*GSLPMA
Trigger: GGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCTCATGCTCACAGCCTaGTTTGTTCAGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNLMLTA*FVQCTV
Trigger: TACTGTGCACTGAACAAACCAGGCTGTGAGCATGAG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCCCATGTATTTCATGTaGGTCACGGCTTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPPMYFM*VTAFFI
Trigger: AATGAAGAAAGCCGTGACCCACATGAAATACATGGG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp TTTTATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCCCCATGTATTTCATGTaGGTCACGGCTTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: FYLVITRVPLWPVGGSIAPMYFM*VTAFFI
Trigger: AATGAAGAAAGCCGTGACCCACATGAAATACATGGG...GGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp GTGGCAGTATTGCCAAGGTGTATTTTTAATGGCTTAGCCAACAATTATTGGTTGTGGCCTTGGCTTTACTaGCCCACTCAGAGACATCAT +
Preference number: 4 (lower is better)
Translates to: VAVLPRCIFNGLANNYWLWPWLY*PTQRHH
Trigger: ATGATGTCTCTGAGTGGGCCAGTAAAGCCAAGGCCA...CAACCAATAATTGTTGGCTAAGCCATTAAAAATACACCTTGGCAATACTGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATAGAGATGCTTGTCAATaGGCTCAGAGGCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNRDACQ*AQRQSP
Trigger: AGGAGATTGCCTCTGAGCCCATTGACAAGCATCTCT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCATTTGCATTGGTCCTaGCTTTCTTCCAAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPHLHWS*LSSKGF
Trigger: AAACCCTTTGGAAGAAAGCCAGGACCAATGCAAATG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGATCTTTATGGTGACTaGCTCAGGTTCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNDLYGD*LRFCWL
Trigger: CAGCCAACAGAACCTGAGCCAGTCACCATAAAGATC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp CTTACTCAATCTGTCTTTGCATTTCAAAGCCCTTTGGAGCTATCAAGTAAAGGGTTTGTTCTGGAACACTaGGGTCAAGGACTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LTQSVFAFQSPLELSSKGFVLEH*GQGLNL
Trigger: CAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAA...CCCTTTACTTGATAGCTCCAAAGGGCTTTGAAATGCAAAGACAGATTGAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCAGGACAAGGAAGAGCTaGCCAAGCATCAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFRTRKS*PSISKH
Trigger: GTGCTTGCTGATGCTTGGGCAGCTCTTCCTTGTCCT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATACAAATCCTGGATTCTaGAAGTCTTCTGATCCGTGC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNTNPGF*KSSDPC
Trigger: GCACGGATCAGAAGACTTGCAGAATCCAGGATTTGT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCGAAAGAGTCTTCACTaGTTACACATGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPRKSLH*LHMNVH
Trigger: GTGAACATTCATGTGTAAGCAGTGAAGACTCTTTCG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCATTCCAGTGACAAAGTaGTTCACAGTCTCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPIPVTK*FTVSKF
Trigger: GAACTTTGAGACTGTGAAGCACTTTGTCACTGGAAT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCACCGTGCTGCCATATTaGAGCAGACCTACTCGGGTA +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFTVLPY*SRPTRV
Trigger: TACCCGAGTAGGTCTGCTCCAATATGGCAGCACGGT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp GTGGCAGTATTGCCAAGGTGTATTTTTAATGGCTTAGCCAACAATTATTGGTTGGAATGTTCACAACCATaGTCCCCCAAAGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: VAVLPRCIFNGLANNYWLECSQP*SPKAQE
Trigger: CTCTTGTGCTTTGGGGGACCATGGTTGTGAACATTC...CAACCAATAATTGTTGGCTAAGCCATTAAAAATACACCTTGGCAATACTGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATAAAGACCAGGTCAATTaGGCCTTCAGTGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNKDQVN*AFSASL
Trigger: AAGAGATGCACTGAAGGCCCAATTGACCTGGTCTTT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCCACACGAGCAGCTTTaGGGGAAACTGCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFPHEQL*GKLPRN
Trigger: ATTCCTTGGCAGTTTCCCCCAAAGCTGCTCGTGTGG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCTGACATCCGTGATTTaGAGAGGCACAATAGTCAAT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNLTSVI*RGTIVN
Trigger: ATTGACTATTGTGCCTCTTCAAATCACGGATGTCAG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTTCACTGCTTACACATaGATGTTCACAACCATGGTC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNFTAYT*MFTTMV
Trigger: GACCATGGTTGTGAACATTCATGTGTAAGCAGTGAA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATATTCACAACCATGGTTaGTCAGCAAGCAGTAATCTG +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNIHNHG*SASSNL
Trigger: CAGATTACTGCTTGCTGAGCAACCATGGTTGTGAAT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCATGCTGGGTTGACTTaGAGACATTCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFHAGLT*RHSSSC
Trigger: GCAGGAGGAAGAATGTCTGCAAGTCAACCCAGCATG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGTGCATCTCTTGCAGTaGTTTCCATCCTCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFVHLLQ*FPSSAR
Trigger: CCTAGCTGAGGATGGAAAGCACTGCAAGAGATGCAC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCAAGCCTTCTGAGCACTaGCAGACAAAGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFKPSEH*QTKDSS
Trigger: AGAGGAGTCCTTTGTCTGCCAGTGCTCAGAAGGCTT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCCCATGTATTTCATGTaGGTCACGGCTTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNPMYFM*VTAFFI
Trigger: AATGAAGAAAGCCGTGACCCACATGAAATACATGGG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTGGCCTTGGCTTTACTaGCCCACTCAGAGACATCAT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFWPWLY*PTQRHH
Trigger: ATGATGTCTCTGAGTGGGCCAGTAAAGCCAAGGCCA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCACATCCATGATTTTCTaGGGCACAGTAGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFTSMIF*GTVVHS
Trigger: GCTGTGGACTACTGTGCCTCAGAAAATCATGGATGT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTACCCCTCAAAGCACTaGCACACGAAAGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFYPSKH*HTKESS
Trigger: TGAAGACTCTTTCGTGTGTCAGTGCTTTGAGGGGTA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGATGAACACCAGATCTaGCCGCTTATTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFDEHQI*PLILTG
Trigger: TCCTGTGAGAATAAGCGGGCAGATCTGGTGTTCATC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp TTTATTATATATAAGTGCACTGTAGCTGACTTCAGATGCACCAGAATAGGTCATGATGAACACCAGATCTaGCCGCTTATTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: FIIYKCTVADFRCTRIGHDEHQI*PLILTG
Trigger: TCCTGTGAGAATAAGCGGGCAGATCTGGTGTTCATC...ATGACCTATTCTGGTGCATCTGAAGTCAGCTACAGTGCACTTATATATAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGCCTGGTTTGTTCAGTaGACAGTAGTTGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFAWFVQ*TVVDPS
Trigger: CGAAGGATCAACTACTGTGCACTGAACAAACCAGGC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGTGTTCACACACTCATaGTCACAGCCTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFVFTHS*SQPGLF
Trigger: GAACAAACCAGGCTGTGAGCATGAGTGTGTGAACAC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp GTGGCAGTATTGCCAAGGTGTATTTTTAATGGCTTAGCCAACAATTATTGGTTGATTCACAACCATGGTTaGTCAGCAAGCAGTAATCTG +
Preference number: 4 (lower is better)
Translates to: VAVLPRCIFNGLANNYWLIHNHG*SASSNL
Trigger: CAGATTACTGCTTGCTGAGCAACCATGGTTGTGAAT...CAACCAATAATTGTTGGCTAAGCCATTAAAAATACACCTTGGCAATACTGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCGAAAGAGTCTTCACTaGTTACACATGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNRKSLH*LHMNVH
Trigger: GTGAACATTCATGTGTAAGCAGTGAAGACTCTTTCG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTTGTTCACACACATGTaGTCACAGCCATGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFLFTHM*SQPCWV
Trigger: AACCCAGCATGGCTGTGAGCACATGTGTGTGAACAA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCTTCAGTGCATCTCTTaGAGTGCTTTCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFLQCIS*SAFHPQ
Trigger: CTGAGGATGGAAAGCACTGCAAGAGATGCACTGAAG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATATTCCAGTGACAAAGTaGTTCACAGTCTCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNIPVTK*FTVSKF
Trigger: GAACTTTGAGACTGTGAAGCACTTTGTCACTGGAAT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCAACAGGAATCTATGTTaGACTGCAAAATTAGAACAG +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPNRNLC*TAKLEQ
Trigger: CTGTTCTAATTTTGCAGTGCAACATAGATTCCTGTT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCTGTCATGGTGCCAGTaGATAGATGCCTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFLSWCQ*IDASFS
Trigger: AGAGAATGAGGCATCTATCCACTGGCACCATGACAG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCTCATGCTCACAGCCTaGTTTGTTCAGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFLMLTA*FVQCTV
Trigger: TACTGTGCACTGAACAAACCAGGCTGTGAGCATGAG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGAATGTTCACAACCATaGTCCCCCAAAGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFECSQP*SPKAQE
Trigger: CTCTTGTGCTTTGGGGGACCATGGTTGTGAACATTC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCAGGTGCTCACATCCATaGTTAACATCCTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFRCSHP*LTSWQT
Trigger: TGTCTGCCAGGATGTTAACCATGGATGTGAGCACCT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGTAGTTCTTCCTCAATaGCTTTTCCTACCCCAACGG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFVVLPQ*LFLPQR
Trigger: CCGTTGGGGTAGGAAAAGCCATTGAGGAAGAACTAC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTCATTTGCAACGTTCTaGAACAGTATAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPSFATF*NSIRFS
Trigger: TGAAAACCTTATACTGTTCCAGAACGTTGCAAATGA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR CAA 72 bp CCAATTTTGGGAATGCCAATGTGTCAGCTAAACATGTaGGAGGATACCTTTATTCTGTCCTTACTCAATCTG +
Preference number: 4 (lower is better)
Translates to: PILGMPMCQLNM*EDTFILSLLNL
Trigger: CAGATTGAGTAAGGACAGAATAAAGGTATCCTCCAACATGTTTAGCTGACACATTGGCATTCCCAAAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCAGTCACAATCATTATaGTGCGTGGCACATTTTCCC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFQSQSL*CVAHFP
Trigger: GGGAAAATGTGCCACGCATCATAATGATTGTGACTG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTTTGTTCTGGAACACTaGGGTCAAGGACTCAATCTG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFFVLEH*GQGLNL
Trigger: CAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCATTCTGCAAGTCTTCTaGTCCGTGCTGAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFILQVF*SVLRMY
Trigger: GTACATTCTCAGCACGGATCAGAAGACTTGCAGAAT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCAGGATTTGTCTGTGTTaGCGCAGGAGTATTCACAAC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFRICLC*RRSIHN
Trigger: GTTGTGAATACTCCTGCGTCAACACAGACAAATCCT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCACAAATCCTGGATTCTaGAAGTCTTCTGATCCGTGC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFTNPGF*KSSDPC
Trigger: GCACGGATCAGAAGACTTGCAGAATCCAGGATTTGT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCTGGCCCCTTCTACTTaGGTAAAACTTCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFLAPST*VKLLSN
Trigger: GTTTGAGAGAAGTTTTACCCAAGTAGAAGGGGCCAG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
3UTR CAA 72 bp GAGGATACCTTTATTCTGTCCTTACTCAATCTGTCTTaGCATTTCAAAGCCCTTTGGAGCTATCAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: EDTFILSLLNLS*HFKALWSYQVK
Trigger: CTTTACTTGATAGCTCCAAAGGGCTTTGAAATGCAAAGACAGATTGAGTAAGGACAGAATAAAGGTATCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR TCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCTGACATCCGTGATTTaGAGAGGCACAATAGTCAAT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFLTSVI*RGTIVN
Trigger: ATTGACTATTGTGCCTCTTCAAATCACGGATGTCAG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCATTCACAACCATGGTTaGTCAGCAAGCAGTAATCTG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFIHNHG*SASSNL
Trigger: CAGATTACTGCTTGCTGAGCAACCATGGTTGTGAAT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTCTTACTTCTTCATTTaGAACGTTCTGGAACAGTAT +
Preference number: 4 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNSYFFI*NVLEQY
Trigger: ATACTGTTCCAGAACGTTGCAAATGAAGAAGTAAGA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCCCATGTATTTCATGTaGGTCACGGCTTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFPMYFM*VTAFFI
Trigger: AATGAAGAAAGCCGTGACCCACATGAAATACATGGG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCATTTGCATTGGTCCTaGCTTTCTTCCAAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFHLHWS*LSSKGF
Trigger: AAACCCTTTGGAAGAAAGCCAGGACCAATGCAAATG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCATTCCAGTGACAAAGTaGTTCACAGTCTCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFIPVTK*FTVSKF
Trigger: GAACTTTGAGACTGTGAAGCACTTTGTCACTGGAAT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTCTTACTTCTTCATTTaGAACGTTCTGGAACAGTAT +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFSYFFI*NVLEQY
Trigger: ATACTGTTCCAGAACGTTGCAAATGAAGAAGTAAGA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR GCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCAACAGGAATCTATGTTaGACTGCAAAATTAGAACAG +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFNRNLC*TAKLEQ
Trigger: CTGTTCTAATTTTGCAGTGCAACATAGATTCCTGTT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CCA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTCATTTGCAACGTTCTaGAACAGTATAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFSFATF*NSIRFS
Trigger: TGAAAACCTTATACTGTTCCAGAACGTTGCAAATGA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS GCA 90 bp AAGGACTCCTCTGTGTTCAGGCACAGCTGCTCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACCCGGCTGCAGGTCTTGCCATTGGGG +
Preference number: 5 (lower is better)
Translates to: KDSSVFRHSCSQPWS*CAQWSTRLQVLPLG
Trigger: CCCCAATGGCAAGACCTGCAGCCGGGTGGACCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCTGTGCCTGAACACAGAGGAGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp CAGACAAAGGACTCCTCTGTGTTCAGGCACAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGGTCCACCCGGCTGCAGGTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: QTKDSSVFRHSCSQP*SCCAQWSTRLQVLP
Trigger: TGGCAAGACCTGCAGCCGGGTGGACCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCTGTGCCTGAACACAGAGGAGTCCTTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 90 bp GTGTATTCAGGTCCACCTGACCGACACCGATGGCAAAGATCAGGATaGCTGTGTTCCGGGCCTTGGCAGCTACCTCAGCCACCGAGTCCT +
Preference number: 5 (lower is better)
Translates to: VYSGPPDRHRWQRSG*LCSGPWQLPQPPSP
Trigger: AGGACTCGGTGGCTGAGGTAGCTGCCAAGGCCCGGAACACAGGCATCCTGATCTTTGCCATCGGTGTCGGTCAGGTGGACCTGAATACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp TACATGGCATATGTTCTACTAGCTGGGCTACCTTGTCTGGCCTCAGTGGGAGAGGGAAGGGAACCTGGCTaGGGGACGCTCTCTGCCGTC +
Preference number: 5 (lower is better)
Translates to: YMAYVLLAGLPCLASVGEGREPG*GTLSAV
Trigger: GACGGCAGAGAGCGTCCCCAAGCCAGGTTCCCTTCC...CTCTCCCACTGAGGCCAGACAAGGTAGCCCAGCTAGTAGAACATATGCCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS TCA 90 bp GATGCGTGGCACATTTTCCCGCAAGGGCCTGGCCCCCTCTGCTTCTaGGAAGGCAATGTTGAGGGCATATTGGATGGCAAGCCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: DAWHIFPQGPGPLCF*EGNVEGILDGKPCH
Trigger: ATGACAGGGCTTGCCATCCAATATGCCCTCAACATTGCCTTCTCAGAAGCAGAGGGGGCCAGGCCCTTGCGGGAAAATGTGCCACGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 90 bp TTGTGGGGCTCACTCCCAATGGCCTTTAGTGTATTCAGGTCCACCTaGCCGACACCGATGGCAAAGATCAGGATGCCTGTGTTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LWGSLPMAFSVFRST*PTPMAKIRMPVFRA
Trigger: GGCCCGGAACACAGGCATCCTGATCTTTGCCATCGGTGTCGGTCAGGTGGACCTGAATACACTAAAGGCCATTGGGAGTGAGCCCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 90 bp ATACCATTGGCCTTGGCTTTACTGGCCCACTCAGAGACATCATCCTaGGCCCGTCCGTCGGTGAACACGATGGCTACTCTGGGTACCTGC +
Preference number: 5 (lower is better)
Translates to: IPLALALLAHSETSS*ARPSVNTMATLGTC
Trigger: GCAGGTACCCAGAGTAGCCATCGTGTTCACCGACGGACGGGCTCAGGATGATGTCTCTGAGTGGGCCAGTAAAGCCAAGGCCAATGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS TCA 90 bp TTACCATTGGCCTTGGCTTTACTGGCCCACTCAGAGACATCATCCTaGGCCCGTCCGTCGGTGAACACGATGGCTACTCTGGGTACCTGC +
Preference number: 5 (lower is better)
Translates to: LPLALALLAHSETSS*ARPSVNTMATLGTC
Trigger: GCAGGTACCCAGAGTAGCCATCGTGTTCACCGACGGACGGGCTCAGGATGATGTCTCTGAGTGGGCCAGTAAAGCCAAGGCCAATGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTAGGAAGGGAACCTGGCTaGGGGACGCTCTCTGCCGTC +
Preference number: 5 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVGREPG*GTLSAV
Trigger: GACGGCAGAGAGCGTCCCCAAGCCAGGTTCCCTTCC...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS TCA 90 bp TGCAGACATTCTTCCTCCTGCAGCGCTTCCCATCCTCAGCCAGCCTaGACCCCTCCAGACACTTGCAGACGTATGATTCGCCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: CRHSSSCSASHPQPA*TPPDTCRRMIRHCS
Trigger: TGAACAGTGGCGAATCATACGTCTGCAAGTGTCTGGAGGGGTTCAGGCTGGCTGAGGATGGGAAGCGCTGCAGGAGGAAGAATGTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 90 bp GAACACCAGATCTGCCCGCTTATTCTCACAGGAACTCTCCAGCAGTaGAGTCTGCGGATACATCCGGACATGACGGCCTCTGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: EHQICPLILTGTLQQ*SLRIHPDMTASGRE
Trigger: TTCCCTTCCAGAGGCCGTCATGTCCGGATGTATCCGCAGACTGCACTGCTGGAGAGTTCCTGTGAGAATAAGCGGGCAGATCTGGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp AATTGGCCACCAGGAAGACATGGTCCTTGTGGGGCTCACTCCCAATaGCCTTTAGTGTATTCAGGTCCACCTGACCGACACCGATGGCAA +
Preference number: 5 (lower is better)
Translates to: NWPPGRHGPCGAHSQ*PLVYSGPPDRHRWQ
Trigger: TTGCCATCGGTGTCGGTCAGGTGGACCTGAATACACTAAAGGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp TTCAGGGCCAGCCCAGTCATAGAGCCTTTGCCCATGTATTTCATGTaGGTCACGGCTTTCTTCATTTCCTTGGCTGAGCTGAAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: FRASPVIEPLPMYFM*VTAFFISLAELKPL
Trigger: GAGGGGCTTCAGCTCAGCCAAGGAAATGAAGAAAGCCGTGACCCACATGAAATACATGGGCAAAGGCTCTATGACTGGGCTGGCCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGGAAGGGAACCTGGCTaGGGGACGCTCTCTGCCGTC +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPGREPG*GTLSAV
Trigger: GACGGCAGAGAGCGTCCCCAAGCCAGGTTCCCTTCC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS TCA 90 bp TGCACAGTTTGTTCTGGAACACTGAGGTCAAGGACTCAATCTGGCTaGAATTGGCCACCAGGAAGACATGGTCCTTGTGGGGCTCACTCC +
Preference number: 5 (lower is better)
Translates to: CTVCSGTLRSRTQSG*NWPPGRHGPCGAHS
Trigger: GGAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAACTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 90 bp GAATGTACCCTTGCTTGCACTTGCAGATGTACGAGCCAGGTGTGTTaGGGCAGAAGTGGGCACAGTTGTGTTCCAAGACGCTGCACATGT +
Preference number: 5 (lower is better)
Translates to: ECTLACTCRCTSQVC*GRSGHSCVPRRCTC
Trigger: ACATGTGCAGCGTCTTGGAACACAACTGTGCCCACTTCTGCCTCAACACACCTGGCTCGTACATCTGCAAGTGCAAGCAAGGGTACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 90 bp TGCCCTGGAGCAGGTCTTGAGGTCATCATTAATAAGGAAGCCTTCTaGGCACTGGCAGACAAAGGACTCCTCTGTGTTCAGGCACAGCTG +
Preference number: 5 (lower is better)
Translates to: CPGAGLEVIINKEAF*ALADKGLLCVQAQL
Trigger: CAGCTGTGCCTGAACACAGAGGAGTCCTTTGTCTGCCAGTGCTCAGAAGGCTTCCTTATTAATGATGACCTCAAGACCTGCTCCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 90 bp CAAGAGTCCAGTTTTGCACAGGTCTTCCCATCGCTTCGGAGCACATaGCCCTCAGGACATTGGCAGGCAAAGGATTTGTCTGTGTTGACG +
Preference number: 5 (lower is better)
Translates to: QESSFAQVFPSLRST*PSGHWQAKDLSVLT
Trigger: CGTCAACACAGACAAATCCTTTGCCTGCCAATGTCCTGAGGGTCATGTGCTCCGAAGCGATGGGAAGACCTGTGCAAAACTGGACTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp GAGGTCAAGGACTCAATCTGGCTGAAATTGGCCACCAGGAAGACATaGTCCTTGTGGGGCTCACTCCCAATGGCCTTTAGTGTATTCAGG +
Preference number: 5 (lower is better)
Translates to: EVKDSIWLKLATRKT*SLWGSLPMAFSVFR
Trigger: CCTGAATACACTAAAGGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCTTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATAGGAAGACATGGTCCTaGTGGGGCTCACTCCCAATG +
Preference number: 5 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYRKTWS*WGSLPM
Trigger: CATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCT...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCTGGCTCAGGTTCTGTaGGCTGGTGGGCCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPLAQVL*AGGPAV
Trigger: CACAGCAGGCCCACCAGCCAACAGAACCTGAGCCAG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS TCA 90 bp CAAGACGCTGCACATGTGGACTGTGCACAGTTTGTTCTGGAACACTaGGGTCAAGGACTCAATCTGGCTGAAATTGGCCACCAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: QDAAHVDCAQFVLEH*GQGLNLAEIGHQED
Trigger: GTCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAACTGTGCACAGTCCACATGTGCAGCGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 90 bp CTGTGGCACACAAATCCTGGATTCTGCAAGTCTTCTGATCCGTGCTaGGAATGTACCCTTGCTTGCACTTGCAGATGTACGAGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LWHTNPGFCKSSDPC*ECTLACTCRCTSQV
Trigger: CACCTGGCTCGTACATCTGCAAGTGCAAGCAAGGGTACATTCTCAGCACGGATCAGAAGACTTGCAGAATCCAGGATTTGTGTGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 90 bp TGTGGAATACTGCAGCAGCCCCACACGAGCAGCTTTGGGGGAAACTaGCAAGGAATCTATGATTCCAGTGACAAAGTGCTTCACAGTCTC +
Preference number: 5 (lower is better)
Translates to: CGILQQPHTSSFGGN*QGIYDSSDKVLHSL
Trigger: GAGACTGTGAAGCACTTTGTCACTGGAATCATAGATTCCTTGGCAGTTTCCCCCAAAGCTGCTCGTGTGGGGCTGCTGCAGTATTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp ACTGTGCACAGTTTGTTCTGGAACACTGAGGTCAAGGACTCAATCTaGCTGAAATTGGCCACCAGGAAGACATGGTCCTTGTGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: TVHSLFWNTEVKDSI*LKLATRKTWSLWGS
Trigger: TGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAACTGTGCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp TTGAGGCAGAAGTGGGCACAGTTGTGTTCCAAGACGCTGCACATGTaGACTGTGCACAGTTTGTTCTGGAACACTGAGGTCAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: LRQKWAQLCSKTLHM*TVHSLFWNTEVKDS
Trigger: TGAGTCCTTGACCTCAGTGTTCCAGAACAAACTGTGCACAGTCCACATGTGCAGCGTCTTGGAACACAACTGTGCCCACTTCTGCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp GAGCAGGTCTTGAGGTCATCATTAATAAGGAAGCCTTCTGAGCACTaGCAGACAAAGGACTCCTCTGTGTTCAGGCACAGCTGCTCACAG +
Preference number: 5 (lower is better)
Translates to: EQVLRSSLIRKPSEH*QTKDSSVFRHSCSQ
Trigger: CTGTGAGCAGCTGTGCCTGAACACAGAGGAGTCCTTTGTCTGCCAGTGCTCAGAAGGCTTCCTTATTAATGATGACCTCAAGACCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp TACATGGCATATGTTCTACTAGCTGGGCTACCTTGTCTGGCCTCAGTGGGAGAGTCAATCTGGCTGAAATaGGCCACCAGGAAGACATGG +
Preference number: 5 (lower is better)
Translates to: YMAYVLLAGLPCLASVGESIWLK*ATRKTW
Trigger: CCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGA...CTCTCCCACTGAGGCCAGACAAGGTAGCCCAGCTAGTAGAACATATGCCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS TCA 90 bp CCATGGTCCTCTGTGGCACACAAATCCTGGATTCTGCAAGTCTTCTaGTCCGTGCTGAGAATGTACCCTTGCTTGCACTTGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: PWSSVAHKSWILQVF*SVLRMYPCLHLQMY
Trigger: GTACATCTGCAAGTGCAAGCAAGGGTACATTCTCAGCACGGATCAGAAGACTTGCAGAATCCAGGATTTGTGTGCCACAGAGGACCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp TTAAAGGTCTTCAGGGAGAACTCGTTCTTGACCGTGCTGCCATATTaGAGCAGACCTACTCGGGTAACATCAGGACCGATGTCCAAGAAC +
Preference number: 5 (lower is better)
Translates to: LKVFRENSFLTVLPY*SRPTRVTSGPMSKN
Trigger: GTTCTTGGACATCGGTCCTGATGTTACCCGAGTAGGTCTGCTCCAATATGGCAGCACGGTCAAGAACGAGTTCTCCCTGAAGACCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp TCGCCACTGTTCACACAAAGGTGCTCACATCCATGGTTAACATCCTaGCAGACATCTTTCCTTCTGCAGGTCTTCCCATCGTCACGAAGA +
Preference number: 5 (lower is better)
Translates to: SPLFTQRCSHPWLTS*QTSFLLQVFPSSRR
Trigger: TCTTCGTGACGATGGGAAGACCTGCAGAAGGAAAGATGTCTGCCAGGATGTTAACCATGGATGTGAGCACCTTTGTGTGAACAGTGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp TTACTGCACAGTTTGTTCTGGAACACTGAGGTCAAGGACTCAATCTaGCTGAAATTGGCCACCAGGAAGACATGGTCCTTGTGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: LLHSLFWNTEVKDSI*LKLATRKTWSLWGS
Trigger: TGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAACTGTGCAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGACCGTGCTGCCATATaGGAGCAGACCTACTCGGGT +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPDRAAI*EQTYSG
Trigger: ACCCGAGTAGGTCTGCTCCAATATGGCAGCACGGTC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTTTAGGGAGAACTCGTTCTaGACCGTGCTGCCATATTGG +
Preference number: 5 (lower is better)
Translates to: ITRVPLWPVGGSIAKVYFRENSF*TVLPYW
Trigger: CCAATATGGCAGCACGGTCAAGAACGAGTTCTCCCT...AAAATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTCAATCTGGCTGAAATaGGCCACCAGGAAGACATGG +
Preference number: 5 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYSIWLK*ATRKTW
Trigger: CCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGA...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATATGACCCTCAGGACATaGGCAGGCAAAGGATTTGTC +
Preference number: 5 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYMTLRT*AGKGFV
Trigger: GACAAATCCTTTGCCTGCCAATGTCCTGAGGGTCAT...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTACCTTCAGTGCATCTCTaGCAGTGCTTTCCATCCTCA +
Preference number: 5 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVPSVHL*QCFPSS
Trigger: TGAGGATGGAAAGCACTGCAAGAGATGCACTGAAGG...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS TCA 90 bp GCACATGACCCTCAGGACATTGGCAGGCAAAGGATTTGTCTGTGTTaGCGCAGGAGTATTCACAACCATGGTTGCTCAGCAAGCAGTAAT +
Preference number: 5 (lower is better)
Translates to: AHDPQDIGRQRICLC*RRSIHNHGCSASSN
Trigger: ATTACTGCTTGCTGAGCAACCATGGTTGTGAATACTCCTGCGTCAACACAGACAAATCCTTTGCCTGCCAATGTCCTGAGGGTCATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCAGGAAGACATGGTCCTaGTGGGGCTCACTCCCAATG +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPRKTWS*WGSLPM
Trigger: CATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCAGAAGTGGGCACAGTaGTGTTCCAAGACGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPQKWAQ*CSKTLH
Trigger: GTGCAGCGTCTTGGAACACAACTGTGCCCACTTCTG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGTACCCTTGCTTGCACTaGCAGATGTACGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKYPCLH*QMYEPG
Trigger: ACCTGGCTCGTACATCTGCAAGTGCAAGCAAGGGTA...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp TTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGCCAGTCATAGAGCCTTaGCCCATGTATTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: LVITRVPLWPVGGSIAKVPVIEP*PMYFMW
Trigger: CCACATGAAATACATGGGCAAAGGCTCTATGACTGG...CACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTACCTGGCCCCTTCTACTaGGGTAAAACTTCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVPGPFY*GKTSLK
Trigger: TTTGAGAGAAGTTTTACCCAAGTAGAAGGGGCCAGG...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTAATTTTACCATTGGCCTaGGCTTTACTGGCCCACTCA +
Preference number: 5 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVILPLA*ALLAHS
Trigger: TGAGTGGGCCAGTAAAGCCAAGGCCAATGGTAAAAT...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS TCA 90 bp CCCCTCAAAGCACTGACACACGAAAGAGTCTTCACTGCTTACACATaGATGTTCACAACCATGGTCCCCCAAAGCACAAGAGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: PLKALTHERVFTAYT*MFTTMVPQSTRVQF
Trigger: AAACTGGACTCTTGTGCTTTGGGGGACCATGGTTGTGAACATTCATGTGTAAGCAGTGAAGACTCTTTCGTGTGTCAGTGCTTTGAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 90 bp AGACAAATGAGGCACAGACTTACTGCACAGTTTGTTCTGGAACACTaGGGTCAAGGACTCAATCTGGCTGAAATTGGCCACCAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: RQMRHRLTAQFVLEH*GQGLNLAEIGHQED
Trigger: GTCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAACTGTGCAGTAAGTCTGTGCCTCATTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS GCA 90 bp TCCAGACACTTGCAGACGTATGATTCGCCACTGTTCACACAAAGGTaGTCACATCCATGGTTAACATCCTGGCAGACATCTTTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: SRHLQTYDSPLFTQR*SHPWLTSWQTSFLL
Trigger: CAGAAGGAAAGATGTCTGCCAGGATGTTAACCATGGATGTGAGCACCTTTGTGTGAACAGTGGCGAATCATACGTCTGCAAGTGTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 90 bp CACAGAATGAAGGCGGCCTTAAAGACAAATGAGGCACAGACTTACTaGACAGTTTGTTCTGGAACACTGAGGTCAAGGACTCAATCTGGC +
Preference number: 5 (lower is better)
Translates to: HRMKAALKTNEAQTY*TVCSGTLRSRTQSG
Trigger: GCCAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAACTGTGCAGTAAGTCTGTGCCTCATTTGTCTTTAAGGCCGCCTTCATTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS CCA 90 bp CACACGAAAGAGTCTTCACTGCTTACACATGAATGTTCACAACCATaGTCCCCCAAAGCACAAGAGTCCAGTTTTGCACAGGTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: HTKESSLLTHECSQP*SPKAQESSFAQVFP
Trigger: TGGGAAGACCTGTGCAAAACTGGACTCTTGTGCTTTGGGGGACCATGGTTGTGAACATTCATGTGTAAGCAGTGAAGACTCTTTCGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGGAAGGGAACCTGGCTaGGGGACGCTCTCTGCCGTC +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFGREPG*GTLSAV
Trigger: GACGGCAGAGAGCGTCCCCAAGCCAGGTTCCCTTCC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTACCCTTGCTTGCACTaGCAGATGTACGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPYPCLH*QMYEPG
Trigger: ACCTGGCTCGTACATCTGCAAGTGCAAGCAAGGGTA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTAGCTGACATCCGTGATTaGAAGAGGCACAATAGTCAA +
Preference number: 5 (lower is better)
Translates to: SYHQGPIMACRWQYCQGVADIRD*KRHNSQ
Trigger: TTGACTATTGTGCCTCTTCAAATCACGGATGTCAGC...TACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCCATGCTGGGTTGACTaGCAGACATTCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPPCWVD*QTFFLL
Trigger: CAGGAGGAAGAATGTCTGCAAGTCAACCCAGCATGG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp TATTTAGTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGCAAAGACCAGGTCAATaGGGCCTTCAGTGCATCTCT +
Preference number: 5 (lower is better)
Translates to: YLVITRVPLWPVGGSIAKQRPGQ*GLQCIS
Trigger: AGAGATGCACTGAAGGCCCAATTGACCTGGTCTTTG...CTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAACTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp GTTATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTCTTCTCCAAGGCTCTaGGATCCATCAATCACAAAG +
Preference number: 5 (lower is better)
Translates to: VITRVPLWPVGGSIAKVYSSPRL*DPSITK
Trigger: CTTTGTGATTGATGGATCCAAGAGCCTTGGAGAAGA...ATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS TCA 90 bp CTGCAGGTCTTCCCATCGTCACGAAGAATGTACCCCTCAAAGCACTaGCACACGAAAGAGTCTTCACTGCTTACACATGAATGTTCACAA +
Preference number: 5 (lower is better)
Translates to: LQVFPSSRRMYPSKH*HTKESSLLTHECSQ
Trigger: TTGTGAACATTCATGTGTAAGCAGTGAAGACTCTTTCGTGTGTCAGTGCTTTGAGGGGTACATTCTTCGTGACGATGGGAAGACCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 90 bp GAAGAATGTACCCCTCAAAGCACTGACACACGAAAGAGTCTTCACTaGTTACACATGAATGTTCACAACCATGGTCCCCCAAAGCACAAG +
Preference number: 5 (lower is better)
Translates to: EECTPQSTDTRKSLH*LHMNVHNHGPPKHK
Trigger: CTTGTGCTTTGGGGGACCATGGTTGTGAACATTCATGTGTAAGCAGTGAAGACTCTTTCGTGTGTCAGTGCTTTGAGGGGTACATTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 90 bp GCTTTGGGGGAAACTGCCAAGGAATCTATGATTCCAGTGACAAAGTaGTTCACAGTCTCAAAGTTCTCTTCTCCAAGGCTCTTGGATCCA +
Preference number: 5 (lower is better)
Translates to: ALGETAKESMIPVTK*FTVSKFSSPRLLDP
Trigger: TGGATCCAAGAGCCTTGGAGAAGAGAACTTTGAGACTGTGAAGCACTTTGTCACTGGAATCATAGATTCCTTGGCAGTTTCCCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 90 bp CAAACTTTGAGTAATATAAACCACACCTCCATCCCATTTTACCATTaGCCTTGGCTTTACTGGCCCACTCAGAGACATCATCCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: QTLSNINHTSIPFYH*PWLYWPTQRHHPEP
Trigger: GGGCTCAGGATGATGTCTCTGAGTGGGCCAGTAAAGCCAAGGCCAATGGTAAAATGGGATGGAGGTGTGGTTTATATTACTCAAAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTCAATCTGGCTGAAATaGGCCACCAGGAAGACATGG +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPSIWLK*ATRKTW
Trigger: CCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTGGACTGTGCACAGTTaGTTCTGGAACACTGAGGTC +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPWTVHS*FWNTEV
Trigger: GACCTCAGTGTTCCAGAACAAACTGTGCACAGTCCA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCCTTCAGTGCATCTCTaGCAGTGCTTTCCATCCTCA +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPPSVHL*QCFPSS
Trigger: TGAGGATGGAAAGCACTGCAAGAGATGCACTGAAGG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCAAAGACCAGGTCAATaGGGCCTTCAGTGCATCTCT +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPQRPGQ*GLQCIS
Trigger: AGAGATGCACTGAAGGCCCAATTGACCTGGTCTTTG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATATCTATGTTGCACTGTaGGCTGGTGGGCCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNIYVAL*AGGPAV
Trigger: CACAGCAGGCCCACCAGCCAACAGTGCAACATAGAT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022947.7
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCTGGCTCAGGTTCTGTaGGCTGGTGGGCCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFLAQVL*AGGPAV
Trigger: CACAGCAGGCCCACCAGCCAACAGAACCTGAGCCAG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS TCA 90 bp CACAGATGCCTTCTTTCAGCTTTTCACTTATTTCGCCCATTGTGCTaGAATCTTCAGCGTAGAAGAGATGCTTGTCAATGGGCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: HRCLLSAFHLFRPLC*NLQRRRDACQWAQR
Trigger: CCTCTGAGCCCATTGACAAGCATCTCTTCTACGCTGAAGATTTCAGCACAATGGGCGAAATAAGTGAAAAGCTGAAAGAAGGCATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATAGGGAGAACTCGTTCTaGACCGTGCTGCCATATTGG +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNRENSF*TVLPYW
Trigger: CCAATATGGCAGCACGGTCAAGAACGAGTTCTCCCT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AGCTATCAAGTAAAGGGTCCCGTCATTAAGCCTGATGATCTAAGTTTAAATTCCAGGAAGACATGGTCCTaGTGGGGCTCACTCCCAATG +
Preference number: 5 (lower is better)
Translates to: SYQVKGPVIKPDDLSLNSRKTWS*WGSLPM
Trigger: CATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCT...GGAATTTAAACTTAGATCATCAGGCTTAATGACGGGACCCTTTACTTGATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CAA 90 bp GTGGCAGTATTGCCAAGGTGTATTTTTAATGGCTTAGCCAACAATTATTGGTTGCAGAAGTGGGCACAGTaGTGTTCCAAGACGCTGCAC +
Preference number: 5 (lower is better)
Translates to: VAVLPRCIFNGLANNYWLQKWAQ*CSKTLH
Trigger: GTGCAGCGTCTTGGAACACAACTGTGCCCACTTCTG...CAACCAATAATTGTTGGCTAAGCCATTAAAAATACACCTTGGCAATACTGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTACCCTTGCTTGCACTaGCAGATGTACGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNYPCLH*QMYEPG
Trigger: ACCTGGCTCGTACATCTGCAAGTGCAAGCAAGGGTA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTGGCAGGCAAAGGATTaGTCTGTGTTGACGCAGGAG +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNWQAKD*SVLTQE
Trigger: CTCCTGCGTCAACACAGACAAATCCTTTGCCTGCCA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCCATGCTGGGTTGACTaGCAGACATTCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNPCWVD*QTFFLL
Trigger: CAGGAGGAAGAATGTCTGCAAGTCAACCCAGCATGG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCCAGTCATAGAGCCTTaGCCCATGTATTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPPVIEP*PMYFMW
Trigger: CCACATGAAATACATGGGCAAAGGCTCTATGACTGG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCCCTGGCCCCTTCTACTaGGGTAAAACTTCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPPGPFY*GKTSLK
Trigger: TTTGAGAGAAGTTTTACCCAAGTAGAAGGGGCCAGG...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTACATAGTGATACCATaGGCCTTGGCTTTACTGGCC +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPYIVIP*ALALLA
Trigger: GGCCAGTAAAGCCAAGGCCAATGGTATCACTATGTA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp TATTATGATTTCCACCTTCTGCTCCTATTCCTACTCCAACTTGCGAGTTCCAATATGGTGCATCTCTCTTaGCCCATGGACCTGAGCACA +
Preference number: 5 (lower is better)
Translates to: YYDFHLLLLFLLQLASSNMVHLS*PMDLST
Trigger: TGTGCTCAGGTCCATGGGCAAAGAGAGATGCACCAT...ATTGGAACTCGCAAGTTGGAGTAGGAATAGGAGCAGAAGGTGGAAATCATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS GCA 90 bp GATGTCCAAGAACTGCAGGATATCCAGAATGAACTCCTTGACCTTTaGATAGTCATAGGTGTTGACACTTCGGGAGCTGTCAATGATGAA +
Preference number: 5 (lower is better)
Translates to: DVQELQDIQNELLDL*IVIGVDTSGAVNDE
Trigger: TTCATCATTGACAGCTCCCGAAGTGTCAACACCTATGACTATGCAAAGGTCAAGGAGTTCATTCTGGATATCCTGCAGTTCTTGGACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTCAATCTGGCTGAAATaGGCCACCAGGAAGACATGG +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNSIWLK*ATRKTW
Trigger: CCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTGGACTGTGCACAGTTaGTTCTGGAACACTGAGGTC +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNWTVHS*FWNTEV
Trigger: GACCTCAGTGTTCCAGAACAAACTGTGCACAGTCCA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGCTGACATCCGTGATTaGAAGAGGCACAATAGTCAA +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPADIRD*KRHNSQ
Trigger: TTGACTATTGTGCCTCTTCAAATCACGGATGTCAGC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp GTGGCAGTATTGCCAAGGTGTATTTTTAATGGCTTAGCCAACAATTATTGGTTGTGGCAGGCAAAGGATTaGTCTGTGTTGACGCAGGAG +
Preference number: 5 (lower is better)
Translates to: VAVLPRCIFNGLANNYWLWQAKD*SVLTQE
Trigger: CTCCTGCGTCAACACAGACAAATCCTTTGCCTGCCA...CAACCAATAATTGTTGGCTAAGCCATTAAAAATACACCTTGGCAATACTGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATATGACCCTCAGGACATaGGCAGGCAAAGGATTTGTC +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNMTLRT*AGKGFV
Trigger: GACAAATCCTTTGCCTGCCAATGTCCTGAGGGTCAT...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp GTGGCAGTATTGCCAAGGTGTATTTTTAATGGCTTAGCCAACAATTATTGGTTGCCATGCTGGGTTGACTaGCAGACATTCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VAVLPRCIFNGLANNYWLPCWVD*QTFFLL
Trigger: CAGGAGGAAGAATGTCTGCAAGTCAACCCAGCATGG...CAACCAATAATTGTTGGCTAAGCCATTAAAAATACACCTTGGCAATACTGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCTCTTCTCCAAGGCTCTaGGATCCATCAATCACAAAG +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPSSPRL*DPSITK
Trigger: CTTTGTGATTGATGGATCCAAGAGCCTTGGAGAAGA...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCAGGAAGACATGGTCCTaGTGGGGCTCACTCCCAATG +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFRKTWS*WGSLPM
Trigger: CATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp GTGGCAGTATTGCCAAGGTGTATTTTTAATGGCTTAGCCAACAATTATTGGTTGTGGACTGTGCACAGTTaGTTCTGGAACACTGAGGTC +
Preference number: 5 (lower is better)
Translates to: VAVLPRCIFNGLANNYWLWTVHS*FWNTEV
Trigger: GACCTCAGTGTTCCAGAACAAACTGTGCACAGTCCA...CAACCAATAATTGTTGGCTAAGCCATTAAAAATACACCTTGGCAATACTGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCAGAAGTGGGCACAGTaGTGTTCCAAGACGCTGCAC +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFQKWAQ*CSKTLH
Trigger: GTGCAGCGTCTTGGAACACAACTGTGCCCACTTCTG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATCACCAGGGTCCCATTATGGCCTGTAGGTGGCAGTATTGCCAAGGTGTATTTTCACAATAGTCAATCTTaGAGCATGTTTTCTTATCGC +
Preference number: 5 (lower is better)
Translates to: ITRVPLWPVGGSIAKVYFHNSQS*SMFSYR
Trigger: GCGATAAGAAAACATGCTCAAAGATTGACTATTGTG...AAAATACACCTTGGCAATACTGCCACCTACAGGCCATAATGGGACCCTGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCCAGTCATAGAGCCTTaGCCCATGTATTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNPVIEP*PMYFMW
Trigger: CCACATGAAATACATGGGCAAAGGCTCTATGACTGG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATTACATAGTGATACCATaGGCCTTGGCTTTACTGGCC +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNYIVIP*ALALLA
Trigger: GGCCAGTAAAGCCAAGGCCAATGGTATCACTATGTA...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp TTTATTATATATAAGTGCACTGTAGCTGACTTCAGATGCACCAGAATAGGTCATAGGGAGAACTCGTTCTaGACCGTGCTGCCATATTGG +
Preference number: 5 (lower is better)
Translates to: FIIYKCTVADFRCTRIGHRENSF*TVLPYW
Trigger: CCAATATGGCAGCACGGTCAAGAACGAGTTCTCCCT...ATGACCTATTCTGGTGCATCTGAAGTCAGCTACAGTGCACTTATATATAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226766.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGCTGACATCCGTGATTaGAAGAGGCACAATAGTCAA +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNADIRD*KRHNSQ
Trigger: TTGACTATTGTGCCTCTTCAAATCACGGATGTCAGC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGTAGACCGTGAAAGATaGTCTTCTTCAAACAGGAAT +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPVDRER*SSSNRN
Trigger: ATTCCTGTTTGAAGAAGACAATCTTTCACGGTCTAC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCATAAGGTTTTCACATTaGCATTGGTCCTGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPIRFSH*HWSWLS
Trigger: AGAAAGCCAGGACCAATGCAAATGTGAAAACCTTAT...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCATGACCCTCAGGACATaGGCAGGCAAAGGATTTGTC +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFMTLRT*AGKGFV
Trigger: GACAAATCCTTTGCCTGCCAATGTCCTGAGGGTCAT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCCTTCAGTGCATCTCTaGCAGTGCTTTCCATCCTCA +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFPSVHL*QCFPSS
Trigger: TGAGGATGGAAAGCACTGCAAGAGATGCACTGAAGG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCAAAGACCAGGTCAATaGGGCCTTCAGTGCATCTCT +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFQRPGQ*GLQCIS
Trigger: AGAGATGCACTGAAGGCCCAATTGACCTGGTCTTTG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp CTGCGCAGCTTATTTATTCTCATGGTAAACTCAGAATTCAGGATTCCTTCCCCCGGGTTTCCTGAAGATTaGGTTGAATGGAAAAGTTTT +
Preference number: 5 (lower is better)
Translates to: LRSLFILMVNSEFRIPSPGFPED*VEWKSF
Trigger: AAAACTTTTCCATTCAACCAAATCTTCAGGAAACCC...GGGGGAAGGAATCCTGAATTCTGAGTTTACCATGAGAATAAATAAGCTGCGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS CCA 90 bp TCATTTGCAACGTTCTGGAACAGTATAAGGTTTTCACATTTGCATTaGTCCTGGCTTTCTTCCAAAGGGTTTCCTGAAGATTTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: SFATFWNSIRFSHLH*SWLSSKGFPEDLVE
Trigger: TTCAACCAAATCTTCAGGAAACCCTTTGGAAGAAAGCCAGGACCAATGCAAATGTGAAAACCTTATACTGTTCCAGAACGTTGCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCCAGTCATAGAGCCTTaGCCCATGTATTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFPVIEP*PMYFMW
Trigger: CCACATGAAATACATGGGCAAAGGCTCTATGACTGG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCCTGGCCCCTTCTACTaGGGTAAAACTTCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFPGPFY*GKTSLK
Trigger: TTTGAGAGAAGTTTTACCCAAGTAGAAGGGGCCAGG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGTAGACCGTGAAAGATaGTCTTCTTCAAACAGGAAT +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNVDRER*SSSNRN
Trigger: ATTCCTGTTTGAAGAAGACAATCTTTCACGGTCTAC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATCACAATAGTCAATCTTaGAGCATGTTTTCTTATCGC +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNHNSQS*SMFSYR
Trigger: GCGATAAGAAAACATGCTCAAAGATTGACTATTGTG...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGCTGACATCCGTGATTaGAAGAGGCACAATAGTCAA +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFADIRD*KRHNSQ
Trigger: TTGACTATTGTGCCTCTTCAAATCACGGATGTCAGC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTCTTCTCCAAGGCTCTaGGATCCATCAATCACAAAG +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFSSPRL*DPSITK
Trigger: CTTTGTGATTGATGGATCCAAGAGCCTTGGAGAAGA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp ATTGAATTTAGACACCTCAGTGTCTCCATTTTCTCTGTCCAGCAGTCAAGCAATGGGTTTCCTGAAGATTaGGTTGAATGGAAAAGTTTT +
Preference number: 5 (lower is better)
Translates to: IEFRHLSVSIFSVQQSSNGFPED*VEWKSF
Trigger: AAAACTTTTCCATTCAACCAAATCTTCAGGAAACCC...ATTGCTTGACTGCTGGACAGAGAAAATGGAGACACTGAGGTGTCTAAATTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCAGGAAAGTAGGTCTTaGATCTTTATGGTGACTGGC +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFQESRS*IFMVTG
Trigger: GCCAGTCACCATAAAGATCAAAGACCTACTTTCCTG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCGTAGACCGTGAAAGATaGTCTTCTTCAAACAGGAAT +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFVDRER*SSSNRN
Trigger: ATTCCTGTTTGAAGAAGACAATCTTTCACGGTCTAC...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCATAAGGTTTTCACATTaGCATTGGTCCTGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFIRFSH*HWSWLS
Trigger: AGAAAGCCAGGACCAATGCAAATGTGAAAACCTTAT...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCCACAATAGTCAATCTTaGAGCATGTTTTCTTATCGC +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFHNSQS*SMFSYR
Trigger: GCGATAAGAAAACATGCTCAAAGATTGACTATTGTG...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS-3UTR CAA 90 bp AACATATGTCTCTGTGACTTATGCACATGTCCATATACACATCAAGGTAAATTCTTCTTACTTCTTCATTaGCAACGTTCTGGAACAGTA +
Preference number: 5 (lower is better)
Translates to: NICLCDLCTCPYTHQGKFFLLLH*QRSGTV
Trigger: TACTGTTCCAGAACGTTGCAAATGAAGAAGTAAGAA...GAATTTACCTTGATGTGTATATGGACATGTGCATAAGTCACAGAGACATATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS GCA 72 bp CCTGCTGTGCACAGTGGTCCACCCGGCTGCAGGTCTTaGCATTGGGGTCCAGATTGTAGCCCTGACGGCAGC +
Preference number: 6 (lower is better)
Translates to: PAVHSGPPGCRS*HWGPDCSPDGS
Trigger: GCTGCCGTCAGGGCTACAATCTGGACCCCAATGGCAAGACCTGCAGCCGGGTGGACCACTGTGCACAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp GTGCACAGTGGTCCACCCGGCTGCAGGTCTTGCCATTaGGGTCCAGATTGTAGCCCTGACGGCAGCGGCAGT +
Preference number: 6 (lower is better)
Translates to: VHSGPPGCRSCH*GPDCSPDGSGS
Trigger: ACTGCCGCTGCCGTCAGGGCTACAATCTGGACCCCAATGGCAAGACCTGCAGCCGGGTGGACCACTGTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp CTCTCCAGCAGTGCAGTCTGCGGATACATCCGGACATaGCGGCCTCTGGAAGGGAACCTGGCTTGGGGACGC +
Preference number: 6 (lower is better)
Translates to: LSSSAVCGYIRT*RPLEGNLAWGR
Trigger: GCGTCCCCAAGCCAGGTTCCCTTCCAGAGGCCGTCATGTCCGGATGTATCCGCAGACTGCACTGCTGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp GGCCTCTGGAAGGGAACCTGGCTTGGGGACGCTCTCTaGCGTCAACTGGGAGGACAAGGAAGAGCTGCCCAA +
Preference number: 6 (lower is better)
Translates to: GLWKGTWLGDAL*RQLGGQGRAAQ
Trigger: TTGGGCAGCTCTTCCTTGTCCTCCCAGTTGACGGCAGAGAGCGTCCCCAAGCCAGGTTCCCTTCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp CGATGGCAAAGATCAGGATGCCTGTGTTCCGGGCCTTaGCAGCTACCTCAGCCACCGAGTCCTGAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: RWQRSGCLCSGP*QLPQPPSPEAS
Trigger: GGAGGCCTCAGGACTCGGTGGCTGAGGTAGCTGCCAAGGCCCGGAACACAGGCATCCTGATCTTTGCCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 72 bp CATCCGGACATGACGGCCTCTGGAAGGGAACCTGGCTaGGGGACGCTCTCTGCCGTCAACTGGGAGGACAAG +
Preference number: 6 (lower is better)
Translates to: HPDMTASGREPG*GTLSAVNWEDK
Trigger: CTTGTCCTCCCAGTTGACGGCAGAGAGCGTCCCCAAGCCAGGTTCCCTTCCAGAGGCCGTCATGTCCGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp CCCACTCAGAGACATCATCCTGAGCCCGTCCGTCGGTaGACACGATGGCTACTCTGGGTACCTGCGTGGAGG +
Preference number: 6 (lower is better)
Translates to: PTQRHHPEPVRR*TRWLLWVPAWR
Trigger: CCTCCACGCAGGTACCCAGAGTAGCCATCGTGTTCACCGACGGACGGGCTCAGGATGATGTCTCTGAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp GGTCCACCTGACCGACACCGATGGCAAAGATCAGGATaGCTGTGTTCCGGGCCTTGGCAGCTACCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: GPPDRHRWQRSG*LCSGPWQLPQP
Trigger: TGGCTGAGGTAGCTGCCAAGGCCCGGAACACAGGCATCCTGATCTTTGCCATCGGTGTCGGTCAGGTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp TCTGTGTTCAGGCACAGCTGCTCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACCCGGCTGCAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: SVFRHSCSQPWS*CAQWSTRLQVL
Trigger: CAAGACCTGCAGCCGGGTGGACCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCTGTGCCTGAACACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp ATGGTGACTGGCTCAGGTTCTGTTGGCTGGTGGGCCTaGTGTGGCAGGTCCCATGCTGCTGAGTCCTGTCTT +
Preference number: 6 (lower is better)
Translates to: MVTGSGSVGWWA*CGRSHAAESCL
Trigger: AAGACAGGACTCAGCAGCATGGGACCTGCCACAGCAGGCCCACCAGCCAACAGAACCTGAGCCAGTCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS CCA 72 bp AGGGAACCTGGCTTGGGGACGCTCTCTGCCGTCAACTaGGAGGACAAGGAAGAGCTGCCCAAGCATCAGCAA +
Preference number: 6 (lower is better)
Translates to: REPGLGTLSAVN*EDKEELPKHQQ
Trigger: TTGCTGATGCTTGGGCAGCTCTTCCTTGTCCTCCCAGTTGACGGCAGAGAGCGTCCCCAAGCCAGGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp AGGGCCTGGCCCCCTCTGCTTCTGAGAAGGCAATGTTaGGGGCATATTGGATGGCAAGCCCTGTCATGGTGC +
Preference number: 6 (lower is better)
Translates to: RAWPPLLLRRQC*GHIGWQALSWC
Trigger: GCACCATGACAGGGCTTGCCATCCAATATGCCCTCAACATTGCCTTCTCAGAAGCAGAGGGGGCCAGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp GCCTTGGCTTTACTGGCCCACTCAGAGACATCATCCTaGGCCCGTCCGTCGGTGAACACGATGGCTACTCTG +
Preference number: 6 (lower is better)
Translates to: ALALLAHSETSS*ARPSVNTMATL
Trigger: CAGAGTAGCCATCGTGTTCACCGACGGACGGGCTCAGGATGATGTCTCTGAGTGGGCCAGTAAAGCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp CTGAGGCCTCCCATCAGTCACAATCATTATGATGCGTaGCACATTTTCCCGCAAGGGCCTGGCCCCCTCTGC +
Preference number: 6 (lower is better)
Translates to: LRPPISHNHYDA*HIFPQGPGPLC
Trigger: GCAGAGGGGGCCAGGCCCTTGCGGGAAAATGTGCCACGCATCATAATGATTGTGACTGATGGGAGGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp TTCCGGGCCTTGGCAGCTACCTCAGCCACCGAGTCCTaGGGCCTCCCATCAGTCACAATCATTATGATGCGT +
Preference number: 6 (lower is better)
Translates to: FRALAATSATES*GLPSVTIIMMR
Trigger: ACGCATCATAATGATTGTGACTGATGGGAGGCCTCAGGACTCGGTGGCTGAGGTAGCTGCCAAGGCCCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp TTGATCTTTATGGTGACTGGCTCAGGTTCTGTTGGCTaGTGGGCCTGCTGTGGCAGGTCCCATGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LIFMVTGSGSVG*WACCGRSHAAE
Trigger: CTCAGCAGCATGGGACCTGCCACAGCAGGCCCACCAGCCAACAGAACCTGAGCCAGTCACCATAAAGATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS CCA 72 bp GTCTTTGATCTTTATGGTGACTGGCTCAGGTTCTGTTaGCTGGTGGGCCTGCTGTGGCAGGTCCCATGCTGC +
Preference number: 6 (lower is better)
Translates to: VFDLYGDWLRFC*LVGLLWQVPCC
Trigger: GCAGCATGGGACCTGCCACAGCAGGCCCACCAGCCAACAGAACCTGAGCCAGTCACCATAAAGATCAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS CAA 72 bp AAGGGCCTGGCCCCCTCTGCTTCTGAGAAGGCAATGTaGAGGGCATATTGGATGGCAAGCCCTGTCATGGTG +
Preference number: 6 (lower is better)
Translates to: KGLAPSASEKAM*RAYWMASPVMV
Trigger: CACCATGACAGGGCTTGCCATCCAATATGCCCTCAACATTGCCTTCTCAGAAGCAGAGGGGGCCAGGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp ATCTGCCCGCTTATTCTCACAGGAACTCTCCAGCAGTaGAGTCTGCGGATACATCCGGACATGACGGCCTCT +
Preference number: 6 (lower is better)
Translates to: ICPLILTGTLQQ*SLRIHPDMTAS
Trigger: AGAGGCCGTCATGTCCGGATGTATCCGCAGACTGCACTGCTGGAGAGTTCCTGTGAGAATAAGCGGGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp CTCAGGGTAAACTCTGTTCGGACCTGTGTGGAATACTaGAGCAGCCCCACACGAGCAGCTTTGGGGGAAACT +
Preference number: 6 (lower is better)
Translates to: LRVNSVRTCVEY*SSPTRAALGET
Trigger: AGTTTCCCCCAAAGCTGCTCGTGTGGGGCTGCTGCAGTATTCCACACAGGTCCGAACAGAGTTTACCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp AACAGGAATCTATGTTGCACTGTTGGCTGGTGGGCCTaGTGTGGCAGGTCCCATGCTGCTGAGTCCTGTCTT +
Preference number: 6 (lower is better)
Translates to: NRNLCCTVGWWA*CGRSHAAESCL
Trigger: AAGACAGGACTCAGCAGCATGGGACCTGCCACAGCAGGCCCACCAGCCAACAGTGCAACATAGATTCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022947.7
CDS CCA 72 bp CCTTTAGTGTATTCAGGTCCACCTGACCGACACCGATaGCAAAGATCAGGATGCCTGTGTTCCGGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: PLVYSGPPDRHR*QRSGCLCSGPW
Trigger: CCAAGGCCCGGAACACAGGCATCCTGATCTTTGCCATCGGTGTCGGTCAGGTGGACCTGAATACACTAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp CCAGGAAGACATGGTCCTTGTGGGGCTCACTCCCAATaGCCTTTAGTGTATTCAGGTCCACCTGACCGACAC +
Preference number: 6 (lower is better)
Translates to: PGRHGPCGAHSQ*PLVYSGPPDRH
Trigger: GTGTCGGTCAGGTGGACCTGAATACACTAAAGGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 72 bp TACGAGCCAGGTGTGTTGAGGCAGAAGTGGGCACAGTaGTGTTCCAAGACGCTGCACATGTGGACTGTGCAC +
Preference number: 6 (lower is better)
Translates to: YEPGVLRQKWAQ*CSKTLHMWTVH
Trigger: GTGCACAGTCCACATGTGCAGCGTCTTGGAACACAACTGTGCCCACTTCTGCCTCAACACACCTGGCTCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp CTTGCTTGCACTTGCAGATGTACGAGCCAGGTGTGTTaGGGCAGAAGTGGGCACAGTTGTGTTCCAAGACGC +
Preference number: 6 (lower is better)
Translates to: LACTCRCTSQVC*GRSGHSCVPRR
Trigger: GCGTCTTGGAACACAACTGTGCCCACTTCTGCCTCAACACACCTGGCTCGTACATCTGCAAGTGCAAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp CTTTCAGGCAGCGGCAGAGAGCAGACGTCTGGGCATTaGCACACTCATGCTGACATCCGTGATTTGAAGAGG +
Preference number: 6 (lower is better)
Translates to: LSGSGREQTSGH*HTHADIRDLKR
Trigger: CCTCTTCAAATCACGGATGTCAGCATGAGTGTGTCAATGCCCAGACGTCTGCTCTCTGCCGCTGCCTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp AGCCAGCCTGAACCCCTCCAGACACTTGCAGACGTATaGTTCGCCACTGTTCACACAAAGGTGCTCACATCC +
Preference number: 6 (lower is better)
Translates to: SQPEPLQTLADV*FATVHTKVLTS
Trigger: GGATGTGAGCACCTTTGTGTGAACAGTGGCGAATCATACGTCTGCAAGTGTCTGGAGGGGTTCAGGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp TGGCAGACAAAGGAACCCAGCATGTTCACGCACAGCTaGTCACAACCATGGTCCTCTGTGGCACACAAATCC +
Preference number: 6 (lower is better)
Translates to: WQTKEPSMFTHS*SQPWSSVAHKS
Trigger: GGATTTGTGTGCCACAGAGGACCATGGTTGTGAGCAGCTGTGCGTGAACATGCTGGGTTCCTTTGTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp TCTTCTTCAAACAGGAATCTATGTTGCACTGTTGGCTaGTGGGCCTGCTGTGGCAGGTCCCATGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: SSSNRNLCCTVG*WACCGRSHAAE
Trigger: CTCAGCAGCATGGGACCTGCCACAGCAGGCCCACCAGCCAACAGTGCAACATAGATTCCTGTTTGAAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022947.7
CDS CCA 72 bp ACCTCCATCCCATTTTACCATTGGCCTTGGCTTTACTaGCCCACTCAGAGACATCATCCTGAGCCCGTCCGT +
Preference number: 6 (lower is better)
Translates to: TSIPFYHWPWLY*PTQRHHPEPVR
Trigger: ACGGACGGGCTCAGGATGATGTCTCTGAGTGGGCCAGTAAAGCCAAGGCCAATGGTAAAATGGGATGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS CAA 90 bp GTTCGGACCTGTGTGGAATACTGCAGCAGCCCCACACGAGCAGCTTaGGGGGAAACTGCCAAGGAATCTATGATTCCAGTGACAAAGTGC +
Preference number: 6 (lower is better)
Translates to: VRTCVEYCSSPTRAA*GETAKESMIPVTKC
Trigger: GCACTTTGTCACTGGAATCATAGATTCCTTGGCAGTTTCCCCCAAAGCTGCTCGTGTGGGGCTGCTGCAGTATTCCACACAGGTCCGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp CTGCAGCAGCCCCACACGAGCAGCTTTGGGGGAAACTaGCAAGGAATCTATGATTCCAGTGACAAAGTGCTT +
Preference number: 6 (lower is better)
Translates to: LQQPHTSSFGGN*QGIYDSSDKVL
Trigger: AAGCACTTTGTCACTGGAATCATAGATTCCTTGGCAGTTTCCCCCAAAGCTGCTCGTGTGGGGCTGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp TTCAGGGAGAACTCGTTCTTGACCGTGCTGCCATATTaGAGCAGACCTACTCGGGTAACATCAGGACCGATG +
Preference number: 6 (lower is better)
Translates to: FRENSFLTVLPY*SRPTRVTSGPM
Trigger: CATCGGTCCTGATGTTACCCGAGTAGGTCTGCTCCAATATGGCAGCACGGTCAAGAACGAGTTCTCCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp TGGCTGAAATTGGCCACCAGGAAGACATGGTCCTTGTaGGGCTCACTCCCAATGGCCTTTAGTGTATTCAGG +
Preference number: 6 (lower is better)
Translates to: WLKLATRKTWSL*GSLPMAFSVFR
Trigger: CCTGAATACACTAAAGGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATTTCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp GACTCAATCTGGCTGAAATTGGCCACCAGGAAGACATaGTCCTTGTGGGGCTCACTCCCAATGGCCTTTAGT +
Preference number: 6 (lower is better)
Translates to: DSIWLKLATRKT*SLWGSLPMAFS
Trigger: ACTAAAGGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 72 bp TGGAACACTGAGGTCAAGGACTCAATCTGGCTGAAATaGGCCACCAGGAAGACATGGTCCTTGTGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: WNTEVKDSIWLK*ATRKTWSLWGS
Trigger: TGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCTTGACCTCAGTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 72 bp TGTGTGGAATACTGCAGCAGCCCCACACGAGCAGCTTaGGGGGAAACTGCCAAGGAATCTATGATTCCAGTG +
Preference number: 6 (lower is better)
Translates to: CVEYCSSPTRAA*GETAKESMIPV
Trigger: CACTGGAATCATAGATTCCTTGGCAGTTTCCCCCAAAGCTGCTCGTGTGGGGCTGCTGCAGTATTCCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 90 bp ATGGCAAGCCCTGTCATGGTGCCAGTGGATAGATGCCTCATTCTCTaGACAGCCCTCTCCACCTCAGACTTCCTCTTAAAGGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: MASPVMVPVDRCLIL*TALSTSDFLLKVFR
Trigger: CCTGAAGACCTTTAAGAGGAAGTCTGAGGTGGAGAGGGCTGTCAAGAGAATGAGGCATCTATCCACTGGCACCATGACAGGGCTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 90 bp AAGGACTCAATCTGGCTGAAATTGGCCACCAGGAAGACATGGTCCTaGTGGGGCTCACTCCCAATGGCCTTTAGTGTATTCAGGTCCACC +
Preference number: 6 (lower is better)
Translates to: KDSIWLKLATRKTWS*WGSLPMAFSVFRST
Trigger: GGTGGACCTGAATACACTAAAGGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 90 bp TGCACAGGTCTTCCCATCGCTTCGGAGCACATGACCCTCAGGACATaGGCAGGCAAAGGATTTGTCTGTGTTGACGCAGGAGTATTCACA +
Preference number: 6 (lower is better)
Translates to: CTGLPIASEHMTLRT*AGKGFVCVDAGVFT
Trigger: TGTGAATACTCCTGCGTCAACACAGACAAATCCTTTGCCTGCCAATGTCCTGAGGGTCATGTGCTCCGAAGCGATGGGAAGACCTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 90 bp ACCGTGAAAGATTGTCTTCTTCAAACAGGAATCTATGTTGCACTGTaGGCTGGTGGGCCTGCTGTGGCAGGTCCCATGCTGCTGAGTCCT +
Preference number: 6 (lower is better)
Translates to: TVKDCLLQTGIYVAL*AGGPAVAGPMLLSP
Trigger: AGGACTCAGCAGCATGGGACCTGCCACAGCAGGCCCACCAGCCAACAGTGCAACATAGATTCCTGTTTGAAGAAGACAATCTTTCACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022947.7
CDS CAA 90 bp AGTTTGTTCTGGAACACTGAGGTCAAGGACTCAATCTGGCTGAAATaGGCCACCAGGAAGACATGGTCCTTGTGGGGCTCACTCCCAATG +
Preference number: 6 (lower is better)
Translates to: SLFWNTEVKDSIWLK*ATRKTWSLWGSLPM
Trigger: CATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATTTCAGCCAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 90 bp CCTTTGCCCATGTATTTCATGTGGGTCACGGCTTTCTTCATTTCCTaGGCTGAGCTGAAGCCCCTCAGGGTAAACTCTGTTCGGACCTGT +
Preference number: 6 (lower is better)
Translates to: PLPMYFMWVTAFFIS*AELKPLRVNSVRTC
Trigger: ACAGGTCCGAACAGAGTTTACCCTGAGGGGCTTCAGCTCAGCCAAGGAAATGAAGAAAGCCGTGACCCACATGAAATACATGGGCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp AGTTTTGCACAGGTCTTCCCATCGCTTCGGAGCACATaGCCCTCAGGACATTGGCAGGCAAAGGATTTGTCT +
Preference number: 6 (lower is better)
Translates to: SFAQVFPSLRST*PSGHWQAKDLS
Trigger: AGACAAATCCTTTGCCTGCCAATGTCCTGAGGGTCATGTGCTCCGAAGCGATGGGAAGACCTGTGCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp GAGTTCCCATTGTTCACACACATGTGCTCACAGCCATaGTGGGTTGACTTGCAGACATTCTTCCTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: EFPLFTHMCSQP*WVDLQTFFLLQ
Trigger: CTGCAGGAGGAAGAATGTCTGCAAGTCAACCCAGCATGGCTGTGAGCACATGTGTGTGAACAATGGGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp CAAAGACCAGGTCAATTGGGCCTTCAGTGCATCTCTTaGAGTGCTTTCCATCCTCAGCTAGGACAAAGCCCT +
Preference number: 6 (lower is better)
Translates to: QRPGQLGLQCIS*SAFHPQLGQSP
Trigger: AGGGCTTTGTCCTAGCTGAGGATGGAAAGCACTGCAAGAGATGCACTGAAGGCCCAATTGACCTGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp AAGTGGGCACAGTTGTGTTCCAAGACGCTGCACATGTaGACTGTGCACAGTTTGTTCTGGAACACTGAGGTC +
Preference number: 6 (lower is better)
Translates to: KWAQLCSKTLHM*TVHSLFWNTEV
Trigger: GACCTCAGTGTTCCAGAACAAACTGTGCACAGTCCACATGTGCAGCGTCTTGGAACACAACTGTGCCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 72 bp GACTTCCTCTTAAAGGTCTTCAGGGAGAACTCGTTCTaGACCGTGCTGCCATATTGGAGCAGACCTACTCGG +
Preference number: 6 (lower is better)
Translates to: DFLLKVFRENSF*TVLPYWSRPTR
Trigger: CCGAGTAGGTCTGCTCCAATATGGCAGCACGGTCAAGAACGAGTTCTCCCTGAAGACCTTTAAGAGGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 72 bp CCTGTCATGGTGCCAGTGGATAGATGCCTCATTCTCTaGACAGCCCTCTCCACCTCAGACTTCCTCTTAAAG +
Preference number: 6 (lower is better)
Translates to: PVMVPVDRCLIL*TALSTSDFLLK
Trigger: CTTTAAGAGGAAGTCTGAGGTGGAGAGGGCTGTCAAGAGAATGAGGCATCTATCCACTGGCACCATGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 72 bp ATCTGGCTGAAATTGGCCACCAGGAAGACATGGTCCTaGTGGGGCTCACTCCCAATGGCCTTTAGTGTATTC +
Preference number: 6 (lower is better)
Translates to: IWLKLATRKTWS*WGSLPMAFSVF
Trigger: GAATACACTAAAGGCCATTGGGAGTGAGCCCCACAAGGACCATGTCTTCCTGGTGGCCAATTTCAGCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 72 bp CCCTCAGGACATTGGCAGGCAAAGGATTTGTCTGTGTaGACGCAGGAGTATTCACAACCATGGTTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PSGHWQAKDLSV*TQEYSQPWLLS
Trigger: GCTGAGCAACCATGGTTGTGAATACTCCTGCGTCAACACAGACAAATCCTTTGCCTGCCAATGTCCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 90 bp CTTAAAGGTCTTCAGGGAGAACTCGTTCTTGACCGTGCTGCCATATaGGAGCAGACCTACTCGGGTAACATCAGGACCGATGTCCAAGAA +
Preference number: 6 (lower is better)
Translates to: LKGLQGELVLDRAAI*EQTYSGNIRTDVQE
Trigger: TTCTTGGACATCGGTCCTGATGTTACCCGAGTAGGTCTGCTCCAATATGGCAGCACGGTCAAGAACGAGTTCTCCCTGAAGACCTTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 90 bp TCCACCTCAGACTTCCTCTTAAAGGTCTTCAGGGAGAACTCGTTCTaGACCGTGCTGCCATATTGGAGCAGACCTACTCGGGTAACATCA +
Preference number: 6 (lower is better)
Translates to: STSDFLLKVFRENSF*TVLPYWSRPTRVTS
Trigger: TGATGTTACCCGAGTAGGTCTGCTCCAATATGGCAGCACGGTCAAGAACGAGTTCTCCCTGAAGACCTTTAAGAGGAAGTCTGAGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp CCTCAGGACATTGGCAGGCAAAGGATTTGTCTGTGTTaGCGCAGGAGTATTCACAACCATGGTTGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: PQDIGRQRICLC*RRSIHNHGCSA
Trigger: TGCTGAGCAACCATGGTTGTGAATACTCCTGCGTCAACACAGACAAATCCTTTGCCTGCCAATGTCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp CACAGTTGTGTTCCAAGACGCTGCACATGTGGACTGTaGACAGTTTGTTCTGGAACACTGAGGTCAAGGACT +
Preference number: 6 (lower is better)
Translates to: HSCVPRRCTCGL*TVCSGTLRSRT
Trigger: AGTCCTTGACCTCAGTGTTCCAGAACAAACTGTGCACAGTCCACATGTGCAGCGTCTTGGAACACAACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp TTCCATCCTCAGCTAGGACAAAGCCCTCTGAGCACCTaGACAGATAGGAGTTCCCATTGTTCACACACATGT +
Preference number: 6 (lower is better)
Translates to: FHPQLGQSPLST*TDRSSHCSHTC
Trigger: ACATGTGTGTGAACAATGGGAACTCCTATCTGTGCAGGTGCTCAGAGGGCTTTGTCCTAGCTGAGGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 72 bp AACATGTGTTTCAGGGCCAGCCCAGTCATAGAGCCTTaGCCCATGTATTTCATGTGGGTCACGGCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: NMCFRASPVIEP*PMYFMWVTAFF
Trigger: GAAGAAAGCCGTGACCCACATGAAATACATGGGCAAAGGCTCTATGACTGGGCTGGCCCTGAAACACATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 90 bp GCACAGTTGTGTTCCAAGACGCTGCACATGTGGACTGTGCACAGTTaGTTCTGGAACACTGAGGTCAAGGACTCAATCTGGCTGAAATTG +
Preference number: 6 (lower is better)
Translates to: AQLCSKTLHMWTVHS*FWNTEVKDSIWLKL
Trigger: CAATTTCAGCCAGATTGAGTCCTTGACCTCAGTGTTCCAGAACAAACTGTGCACAGTCCACATGTGCAGCGTCTTGGAACACAACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp TCTGTGGCACACAAATCCTGGATTCTGCAAGTCTTCTaGTCCGTGCTGAGAATGTACCCTTGCTTGCACTTG +
Preference number: 6 (lower is better)
Translates to: SVAHKSWILQVF*SVLRMYPCLHL
Trigger: CAAGTGCAAGCAAGGGTACATTCTCAGCACGGATCAGAAGACTTGCAGAATCCAGGATTTGTGTGCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp CCTACTCGGGTAACATCAGGACCGATGTCCAAGAACTaGAGGATATCCAGAATGAACTCCTTGACCTTTGCA +
Preference number: 6 (lower is better)
Translates to: PTRVTSGPMSKN*RISRMNSLTFA
Trigger: TGCAAAGGTCAAGGAGTTCATTCTGGATATCCTGCAGTTCTTGGACATCGGTCCTGATGTTACCCGAGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp ACCCCTCAAAGCACTGACACACGAAAGAGTCTTCACTaGTTACACATGAATGTTCACAACCATGGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: TPQSTDTRKSLH*LHMNVHNHGPP
Trigger: TGGGGGACCATGGTTGTGAACATTCATGTGTAAGCAGTGAAGACTCTTTCGTGTGTCAGTGCTTTGAGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp TTGAGGTCATCATTAATAAGGAAGCCTTCTGAGCACTaGCAGACAAAGGACTCCTCTGTGTTCAGGCACAGC +
Preference number: 6 (lower is better)
Translates to: LRSSLIRKPSEH*QTKDSSVFRHS
Trigger: GCTGTGCCTGAACACAGAGGAGTCCTTTGTCTGCCAGTGCTCAGAAGGCTTCCTTATTAATGATGACCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp TTCACACAAAGGTGCTCACATCCATGGTTAACATCCTaGCAGACATCTTTCCTTCTGCAGGTCTTCCCATCG +
Preference number: 6 (lower is better)
Translates to: FTQRCSHPWLTS*QTSFLLQVFPS
Trigger: CGATGGGAAGACCTGCAGAAGGAAAGATGTCTGCCAGGATGTTAACCATGGATGTGAGCACCTTTGTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 90 bp CTTCTCTCAAACATGTGTTTCAGGGCCAGCCCAGTCATAGAGCCTTaGCCCATGTATTTCATGTGGGTCACGGCTTTCTTCATTTCCTTG +
Preference number: 6 (lower is better)
Translates to: LLSNMCFRASPVIEP*PMYFMWVTAFFISL
Trigger: CAAGGAAATGAAGAAAGCCGTGACCCACATGAAATACATGGGCAAAGGCTCTATGACTGGGCTGGCCCTGAAACACATGTTTGAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp ACAAATCCTGGATTCTGCAAGTCTTCTGATCCGTGCTaGGAATGTACCCTTGCTTGCACTTGCAGATGTACG +
Preference number: 6 (lower is better)
Translates to: TNPGFCKSSDPC*ECTLACTCRCT
Trigger: CGTACATCTGCAAGTGCAAGCAAGGGTACATTCTCAGCACGGATCAGAAGACTTGCAGAATCCAGGATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS TCA 72 bp CATGCTCACAGCCTGGTTTGTTCAGTGCACAGTAGTTaGTCCTTCGGCAAGTTTTCCTGTCTGGATTTAGCA +
Preference number: 6 (lower is better)
Translates to: HAHSLVCSVHSS*SFGKFSCLDLA
Trigger: TGCTAAATCCAGACAGGAAAACTTGCCGAAGGATCAACTACTGTGCACTGAACAAACCAGGCTGTGAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp GAACTGCAGGATATCCAGAATGAACTCCTTGACCTTTaGATAGTCATAGGTGTTGACACTTCGGGAGCTGTC +
Preference number: 6 (lower is better)
Translates to: ELQDIQNELLDL*IVIGVDTSGAV
Trigger: GACAGCTCCCGAAGTGTCAACACCTATGACTATGCAAAGGTCAAGGAGTTCATTCTGGATATCCTGCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000226766.2
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp TTGCAGACGTATGATTCGCCACTGTTCACACAAAGGTaGTCACATCCATGGTTAACATCCTGGCAGACATCT +
Preference number: 6 (lower is better)
Translates to: LQTYDSPLFTQR*SHPWLTSWQTS
Trigger: AGATGTCTGCCAGGATGTTAACCATGGATGTGAGCACCTTTGTGTGAACAGTGGCGAATCATACGTCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp GAGTCTTCACTGCTTACACATGAATGTTCACAACCATaGTCCCCCAAAGCACAAGAGTCCAGTTTTGCACAG +
Preference number: 6 (lower is better)
Translates to: ESSLLTHECSQP*SPKAQESSFAQ
Trigger: CTGTGCAAAACTGGACTCTTGTGCTTTGGGGGACCATGGTTGTGAACATTCATGTGTAAGCAGTGAAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CAA 90 bp AGGAATCTATGTTGCACTGCAAAATTAGAACAGGAAAGTAGGTCTTaGATCTTTATGGTGACTGGCTCAGGTTCTGTTGGCTGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: RNLCCTAKLEQESRS*IFMVTGSGSVGWWA
Trigger: GGCCCACCAGCCAACAGAACCTGAGCCAGTCACCATAAAGATCAAAGACCTACTTTCCTGTTCTAATTTTGCAGTGCAACATAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS TCA 72 bp TTCCCATCGTCACGAAGAATGTACCCCTCAAAGCACTaGCACACGAAAGAGTCTTCACTGCTTACACATGAA +
Preference number: 6 (lower is better)
Translates to: FPSSRRMYPSKH*HTKESSLLTHE
Trigger: TTCATGTGTAAGCAGTGAAGACTCTTTCGTGTGTCAGTGCTTTGAGGGGTACATTCTTCGTGACGATGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS GCA 72 bp GAAACTGCCAAGGAATCTATGATTCCAGTGACAAAGTaGTTCACAGTCTCAAAGTTCTCTTCTCCAAGGCTC +
Preference number: 6 (lower is better)
Translates to: ETAKESMIPVTK*FTVSKFSSPRL
Trigger: GAGCCTTGGAGAAGAGAACTTTGAGACTGTGAAGCACTTTGTCACTGGAATCATAGATTCCTTGGCAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
ENSMUST00000228570.2
CDS CCA 72 bp AGTAATATAAACCACACCTCCATCCCATTTTACCATTaGCCTTGGCTTTACTGGCCCACTCAGAGACATCAT +
Preference number: 6 (lower is better)
Translates to: SNINHTSIPFYH*PWLYWPTQRHH
Trigger: ATGATGTCTCTGAGTGGGCCAGTAAAGCCAAGGCCAATGGTAAAATGGGATGGAGGTGTGGTTTATATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228570.2
CDS TCA 72 bp CTTCTTTCAGCTTTTCACTTATTTCGCCCATTGTGCTaGAATCTTCAGCGTAGAAGAGATGCTTGTCAATGG +
Preference number: 6 (lower is better)
Translates to: LLSAFHLFRPLC*NLQRRRDACQW
Trigger: CCATTGACAAGCATCTCTTCTACGCTGAAGATTTCAGCACAATGGGCGAAATAAGTGAAAAGCTGAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS CAA 72 bp TTTGCAACGTTCTGGAACAGTATAAGGTTTTCACATTaGCATTGGTCCTGGCTTTCTTCCAAAGGGTTTCCT +
Preference number: 6 (lower is better)
Translates to: FATFWNSIRFSH*HWSWLSSKGFP
Trigger: AGGAAACCCTTTGGAAGAAAGCCAGGACCAATGCAAATGTGAAAACCTTATACTGTTCCAGAACGTTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS CAA 90 bp ACTTCTTCATTTGCAACGTTCTGGAACAGTATAAGGTTTTCACATTaGCATTGGTCCTGGCTTTCTTCCAAAGGGTTTCCTGAAGATTTG +
Preference number: 6 (lower is better)
Translates to: TSSFATFWNSIRFSH*HWSWLSSKGFPEDL
Trigger: CAAATCTTCAGGAAACCCTTTGGAAGAAAGCCAGGACCAATGCAAATGTGAAAACCTTATACTGTTCCAGAACGTTGCAAATGAAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022947.7
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS CAA 72 bp GTTGAATGGAAAAGTTTTTGTGTAGACCGTGAAAGATaGTCTTCTTCAAACAGGAATCTATGTTGCACTGCA +
Preference number: 6 (lower is better)
Translates to: VEWKSFCVDRER*SSSNRNLCCTA
Trigger: TGCAGTGCAACATAGATTCCTGTTTGAAGAAGACAATCTTTCACGGTCTACACAAAAACTTTTCCATTCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000163455.9
ENSMUST00000227759.2
CDS CAA 72 bp GTTGAATGGAAAAGTTTTTGTGTAGACCGTGAAAGATaGTCTTCTTCAAACAGGAATCTATGTTGCACTGTT +
Preference number: 6 (lower is better)
Translates to: VEWKSFCVDRER*SSSNRNLCCTV
Trigger: AACAGTGCAACATAGATTCCTGTTTGAAGAAGACAATCTTTCACGGTCTACACAAAAACTTTTCCATTCAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022947.7
CDS TCA 72 bp CTGTATTTTAGGCGATTTTCCAAAGCTTCCATTCTTTaGGTCATTTCTTCTAGTAAACGCTGGGTTAATTTT +
Preference number: 6 (lower is better)
Translates to: LYFRRFSKASIL*VISSSKRWVNF
Trigger: AAAATTAACCCAGCGTTTACTAGAAGAAATGACTCAAAGAATGGAAGCTTTGGAAAATCGCCTAAAATACAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163455.9