Pregenerated sensors for MATN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040533Ensembl transcript IDs: ENSMUST00000102576.4
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGACACAAGCATGTGTCCCCTCCTGCTCCCAGCCCCAGGACAGCTaGGGAGACCTGCAGCCGTCCTCCGCAGGTTCCCTTGCTAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: QTQACVPSCSQPQDS*GDLQPSSAGSLAKA Trigger: TGCTTTAGCAAGGGAACCTGCGGAGGACGGCTGCAGGTCTCCCCAGCTGTCCTGGGGCTGGGAGCAGGAGGGGACACATGCTTGTGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| 3UTR GCA 90 bp | CGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTaGTCTGAAACACACATGATCACCATCAGGCACACACATGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: RSHTSSLRSHLCTHP*SETHMITIRHTHAH Trigger: GTGAGCATGTGTGTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| 3UTR GCA 90 bp | AACGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTaGACACACCCTTGCTCTGAAACACACATGATCACCATCAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: NERSRSHTSSLRSHL*THPCSETHMITIRH Trigger: GTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| 3UTR-3UTR CCA 90 bp | CGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCCAGCCCCAGGACAGCTaGGGAGACCTGCAGCCGTCC | + |
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Preference number: 2 (lower is better) Translates to: RTQSLTHLFPAFSPVHTPQPQDS*GDLQPS Trigger: GGACGGCTGCAGGTCTCCCCAGCTGTCCTGGGGCTG...GGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| 3UTR-3UTR GCA 90 bp | AAAAATAACGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCGCATGTGTCCCCTCCTaGTCCCAGCCCCAGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: KNNERSRSHTSSLRSHLCACVPS*SQPQDS Trigger: GCTGTCCTGGGGCTGGGAGCAGGAGGGGACACATGC...GCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCGTTATTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| 3UTR-3UTR CCA 90 bp | GTTGGAAAAATAACGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCCTAAGAACTGTGCATTaGGTGGGAAGTGGCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: VGKITNAVAHTPLPCVLTLRTVH*VGSGQA Trigger: GGCCTGGCCACTTCCCACCCAATGCACAGTTCTTAG...GGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCGTTATTTTTCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| 3UTR-3UTR CAA 90 bp | CATGCTCACAGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCACTAAGAACTGTGCATaGGGTGGGAAGTGGCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: HAHRHHHNTLPADTSMCPTKNCA*GGKWPG Trigger: GCCTGGCCACTTCCCACCCAATGCACAGTTCTTAGT...GGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCTGTGAGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| 3UTR GCA 72 bp | AGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTaGACACACCCTTGCTCTGAAACACACATGATCACC | + |
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Preference number: 3 (lower is better) Translates to: SRSHTSSLRSHL*THPCSETHMIT Trigger: GGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| 3UTR GCA 72 bp | ACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTaGTCTGAAACACACATGATCACCATCAGGCACACA | + |
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Preference number: 3 (lower is better) Translates to: TSSLRSHLCTHP*SETHMITIRHT Trigger: TGTGTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR GCA 90 bp | ACTCCCAGCAGACACAAGCATGTGTCCCCTCCTGCTCCCAGCCCCAGGACAGCTCGTGTCCGGCAGAGGTaGCCTCTGGGCTGGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: TPSRHKHVSPPAPSPRTARVRQR*PLGWGT Trigger: TGTCCCCCAGCCCAGAGGGCACCTCTGCCGGACACG...AGCTGTCCTGGGGCTGGGAGCAGGAGGGGACACATGCTTGTGTCTGCTGGGAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTCCCGCACGCTGTCCTaGGGCCTCCCATCAGTCACC | + |
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Preference number: 4 (lower is better) Translates to: RTQSLTHLFPAFSPVHTPSRTLS*GLPSVT Trigger: GGTGACTGATGGGAGGCCCCAGGACAGCGTGCGGGA...GGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGAACCCGTGGACAGCGGCTaGATGCGGCGCACAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RSHTSSLRSHLCTHPCSEPVDSG*MRRTAC Trigger: GCAAGCTGTGCGCCGCATCCAGCCGCTGTCCACGGG...TTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTGCACCAGCCCCACCTaGGCTAGCCTGTCCGACACA | + |
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Preference number: 4 (lower is better) Translates to: RTQSLTHLFPAFSPVHTPCTSPT*ASLSDT Trigger: TGTGTCGGACAGGCTAGCCCAGGTGGGGCTGGTGCA...GGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR TCA 90 bp | ACTCCCAGCAGACACAAGCATGTGTCCCCTCCTGCTCCCAGCCCCAGGACAGCTGCTGGGGGACAAGACTaGGGCTATCAGGGACCTGTA | + |
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Preference number: 4 (lower is better) Translates to: TPSRHKHVSPPAPSPRTAAGGQD*GYQGPV Trigger: TACAGGTCCCTGATAGCCTCAGTCTTGTCCCCCAGC...AGCTGTCCTGGGGCTGGGAGCAGGAGGGGACACATGCTTGTGTCTGCTGGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | GTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGCCAAGCCCACCCTCGTaGCATTGGGCCCCACATCCA | + |
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Preference number: 4 (lower is better) Translates to: VAHTPLPCVLTCAHTLALPSPPS*HWAPHP Trigger: TGGATGTGGGGCCCAATGCCACGAGGGTGGGCTTGG...CAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | ACGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCAGTCATGGTACCCGTaGACAGCGGCTGGATGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TNAVAHTPLPCVLTCAHTQSWYP*TAAGCG Trigger: GCCGCATCCAGCCGCTGTCCACGGGTACCATGACTG...GGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCACAGCTCAATGCCACTaGCCCTCGCGCGCTCAGACA | + |
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Preference number: 4 (lower is better) Translates to: RTQSLTHLFPAFSPVHTPTAQCH*PSRAQT Trigger: TGTCTGAGCGCGCGAGGGCCAGTGGCATTGAGCTGT...GGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGAAGGAAGACCAGGTCGGTaGCTGAGCCGCTTCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: RSHTSSLRSHLCTHPCSEGRPGR*LSRFHP Trigger: GGGGTGGAAGCGGCTCAGCCACCGACCTGGTCTTCC...TTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR TCA 90 bp | CGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGAAGGCTCCGGCCATCGGTaGAGACGATGCCCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RSHTSSLRSHLCTHPCSEGSGHR*RRCPPS Trigger: AGAAGGTGGGCATCGTCTTCACCGATGGCCGGAGCC...TTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | TCCAGCTACAGGGGGCATTCCCAGGACACTAAGAACTGTGCATTGGGTGGGAAGGAGGCCTTGGAGCCATaGGCCCGGAGCGGGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: SSYRGHSQDTKNCALGGKEALEP*ARSGNS Trigger: AGAGTTCCCGCTCCGGGCCCATGGCTCCAAGGCCTC...CTTCCCACCCAATGCACAGTTCTTAGTGTCCTGGGAATGCCCCCTGTAGCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGAAACACACCGCGGCCCACGCCGATaGCGAACAGCTCAATGCCAC | + |
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Preference number: 4 (lower is better) Translates to: HTSSLRSHLCTHPCSETHRGPRR*RTAQCH Trigger: GTGGCATTGAGCTGTTCGCCATCGGCGTGGGCCGCG...GTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCAGGCGGCGCCAGTCATaGTGCCTTTCTCCATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RTQSLTHLFPAFSPVHTPRRRQS*CLSPCR Trigger: CCTACATGGAGAAAGGCACCATGACTGGCGCCGCCT...GGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | AGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCCTCCTGCTCACGATGCCCACCTTCTaGGCTCCAGGCCTTGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RHHHNTLPADTSMCPLLLTMPTF*APGLAP Trigger: CGGGGCAAGGCCTGGAGCCCAGAAGGTGGGCATCGT...GAGCAGGAGGGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR TCA 90 bp | TCCAGCTACAGGGGGCATTCCCAGGACACTAAGAACTGTGCATTGGGTGGGAAGCAGTGCTGGCGTAGTTaGCCAAGCCCACCCTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSYRGHSQDTKNCALGGKQCWRS*PSPPSW Trigger: CCACGAGGGTGGGCTTGGTCAACTACGCCAGCACTG...CTTCCCACCCAATGCACAGTTCTTAGTGTCCTGGGAATGCCCCCTGTAGCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR TCA 90 bp | TCCAGCTACAGGGGGCATTCCCAGGACACTAAGAACTGTGCATTGGGTGGGAAGCATCGCTGTTCAGGGTaGAGCCCTCATGGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SSYRGHSQDTKNCALGGKHRCSG*SPHGRH Trigger: GTGCCTGCCATGAGGGCTTCACCCTGAACAGCGATG...CTTCCCACCCAATGCACAGTTCTTAGTGTCCTGGGAATGCCCCCTGTAGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | TCCAGCTACAGGGGGCATTCCCAGGACACTAAGAACTGTGCATTGGGTGGGAAGCCACCCTCGTGGCATTaGGCCCCACATCCAGTGACT | + |
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Preference number: 4 (lower is better) Translates to: SSYRGHSQDTKNCALGGKPPSWH*APHPVT Trigger: AGTCACTGGATGTGGGGCCCAATGCCACGAGGGTGG...CTTCCCACCCAATGCACAGTTCTTAGTGTCCTGGGAATGCCCCCTGTAGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | GTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGAGCTGCTCACAATCATaGTCCCCTGTGGCACACAGG | + |
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Preference number: 4 (lower is better) Translates to: VAHTPLPCVLTCAHTLALSCSQS*SPVAHR Trigger: CCTGTGTGCCACAGGGGACCATGATTGTGAGCAGCT...CAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | ACTCCCAGCAGACACAAGCATGTGTCCCCTCCTGCTCCCAGCCCCAGGACAGCTGCAGACCCTCCACCTTaGCCTCAAATTTCAGTATGG | + |
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Preference number: 4 (lower is better) Translates to: TPSRHKHVSPPAPSPRTAADPPP*PQISVW Trigger: CCATACTGAAATTTGAGGCCAAGGTGGAGGGTCTGC...AGCTGTCCTGGGGCTGGGAGCAGGAGGGGACACATGCTTGTGTCTGCTGGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR TCA 90 bp | AGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCCTCCTGCTCTCTTGGATCCGTCGATaGGGAAGACCAGGTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RHHHNTLPADTSMCPLLLSWIRR*GRPGRW Trigger: CCACCGACCTGGTCTTCCTCATCGACGGATCCAAGA...GAGCAGGAGGGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR GCA 90 bp | CACCTGTGCACACACCCTTGCTCTGAAACACACATGATCACCATCAGGCACACAATGCGGCGCACAGCTTaGAGCAGCGAGGCCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: HLCTHPCSETHMITIRHTMRRTA*SSEALE Trigger: CTCCAAGGCCTCGCTGCTGCAAGCTGTGCGCCGCAT...TGTGTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR GCA 90 bp | CACCTGTGCACACACCCTTGCTCTGAAACACACATGATCACCATCAGGCACACATGGACAGCGGCTGGATaGGGCGCACAGCTTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HLCTHPCSETHMITIRHTWTAAG*GAQLAA Trigger: TGCTGCAAGCTGTGCGCCGCATCCAGCCGCTGTCCA...TGTGTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR GCA 90 bp | GTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGTTGGTGATGGCGAATTaGAGAGCCAGGCCAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: VAHTPLPCVLTCAHTLALLVMAN*RARPVM Trigger: CATGACTGGCCTGGCTCTGCAATTCGCCATCACCAA...CAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | AGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCCTCCTGCTCCCGAGTGGGAACTCCTaGCGAATGGAGCTGGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: RHHHNTLPADTSMCPLLLPSGNS*RMELEY Trigger: GTACTCCAGCTCCATTCGCCAGGAGTTCCCACTCGG...GAGCAGGAGGGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR GCA 90 bp | CACCTGTGCACACACCCTTGCTCTGAAACACACATGATCACCATCAGGCACACAATGGAGCTGGAGTACTaGACCAGCCCCACCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: HLCTHPCSETHMITIRHTMELEY*TSPTWA Trigger: AGCCCAGGTGGGGCTGGTGCAGTACTCCAGCTCCAT...TGTGTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR GCA 90 bp | AGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCCTCCTGCTCCGGCGCCAGTCATGGTaGCTTTCTCCATGTAGGACA | + |
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Preference number: 4 (lower is better) Translates to: RHHHNTLPADTSMCPLLLRRQSW*LSPCRT Trigger: TGTCCTACATGGAGAAAGGCACCATGACTGGCGCCG...GAGCAGGAGGGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CACCTGTGCACACACCCTTGCTCTGAAACACACATGATCACCATCAGGCACACAAGGTGCCCTCTGGGCTaGGGGACAAGACTGAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: HLCTHPCSETHMITIRHTRCPLG*GTRLRL Trigger: TAGCCTCAGTCTTGTCCCCCAGCCCAGAGGGCACCT...TGTGTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CACCTGTGCACACACCCTTGCTCTGAAACACACATGATCACCATCAGGCACACACAAACACCAGGTCCGTaGGTCGTGTCCGGCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: HLCTHPCSETHMITIRHTQTPGP*VVSGRG Trigger: ACCTCTGCCGGACACGACCCACGGACCTGGTGTTTG...TGTGTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | GTTGGAAAAATAACGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCCCTGGCGAATGGAGCTaGAGTACTGCACCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VGKITNAVAHTPLPCVLTPGEWS*STAPAP Trigger: TGGGGCTGGTGCAGTACTCCAGCTCCATTCGCCAGG...GGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCGTTATTTTTCCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CACCTGTGCACACACCCTTGCTCTGAAACACACATGATCACCATCAGGCACACAGTGGAAGCGGCCGAGTaGGAACTCCTGGCGAATGGA | + |
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Preference number: 4 (lower is better) Translates to: HLCTHPCSETHMITIRHTVEAAE*ELLANG Trigger: TCCATTCGCCAGGAGTTCCCACTCGGCCGCTTCCAC...TGTGTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CACCTGTGCACACACCCTTGCTCTGAAACACACATGATCACCATCAGGCACACACAGCTTCCAGCTTCCTaGTCAGGGCCTGCAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: HLCTHPCSETHMITIRHTQLPAS*SGPAAD Trigger: GTCTGCTGCAGGCCCTGACCAGGAAGCTGGAAGCTG...TGTGTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCCCTCAAATTTCAGTATaGACTCACAAGCACAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RTQSLTHLFPAFSPVHTPPQISV*THKHRG Trigger: ACCCCTGTGCTTGTGAGTCCATACTGAAATTTGAGG...GGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR TCA 90 bp | CATGCTCACAGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCTGGCCAGCTTCTCGATaGCATTGTAGCTCTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: HAHRHHHNTLPADTSMCPWPASR*HCSSPR Trigger: ACGTGGAGAGCTACAATGTCATCGAGAAGCTGGCCA...GGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCTGTGAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CACCTGTGCACACACCCTTGCTCTGAAACACACATGATCACCATCAGGCACACAAATCATGGTCCCCTGTaGCACACAGGTCGGACACCA | + |
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Preference number: 4 (lower is better) Translates to: HLCTHPCSETHMITIRHTNHGPL*HTGRTP Trigger: TGGTGTCCGACCTGTGTGCCACAGGGGACCATGATT...TGTGTGCCTGATGGTGATCATGTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | GTTGGAAAAATAACGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCATGTCCTTCTTGGTGTaGAAGCGGCCGAGTGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VGKITNAVAHTPLPCVLTMSFLV*KRPSGN Trigger: GTTCCCACTCGGCCGCTTCCACACCAAGAAGGACAT...GGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCGTTATTTTTCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | GTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGAGCTTCTTGCCAATCTaGTTGATGGTCTTGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VAHTPLPCVLTCAHTLALSFLPI*LMVLKS Trigger: TGACTTCAAGACCATCAACCAGATTGGCAAGAAGCT...CAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR TCA 90 bp | CATGCTCACAGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCCATCCAGTGACTCAATaGCCTGAGACAGGAATACCT | + |
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Preference number: 4 (lower is better) Translates to: HAHRHHHNTLPADTSMCPHPVTQ*PETGIP Trigger: AGGTATTCCTGTCTCAGGTCATTGAGTCACTGGATG...GGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCTGTGAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR TCA 90 bp | GTTGGAAAAATAACGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCAGTGACTCAATGACCTaGGACAGGAATACCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VGKITNAVAHTPLPCVLTSDSMT*DRNTFT Trigger: GGTGAAGGTATTCCTGTCTCAGGTCATTGAGTCACT...GGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCGTTATTTTTCCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR GCA 90 bp | TCCAGCTACAGGGGGCATTCCCAGGACACTAAGAACTGTGCATTGGGTGGGAAGACACAGATTTGTTTCTaGAGCTTCTTGCCAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSYRGHSQDTKNCALGGKTQICF*SFLPIW Trigger: CCAGATTGGCAAGAAGCTGCAGAAACAAATCTGTGT...CTTCCCACCCAATGCACAGTTCTTAGTGTCCTGGGAATGCCCCCTGTAGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CCA 90 bp | CATGCTCACAGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCAACGTGTCCACAATCTaGTTGATGAACTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HAHRHHHNTLPADTSMCPNVSTI*LMNFFT Trigger: GGTGAAGAAGTTCATCAACCAGATTGTGGACACGTT...GGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCTGTGAGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 90 bp | CCTTGTCCACGCGGCCCACGCCGATGGCGAACAGCTCAATGCCACTaGCCCTCGCGCGCTCAGACACGTCCCGCACGCTGTCCTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PCPRGPRRWRTAQCH*PSRAQTRPARCPGA Trigger: GGCCCCAGGACAGCGTGCGGGACGTGTCTGAGCGCGCGAGGGCCAGTGGCATTGAGCTGTTCGCCATCGGCGTGGGCCGCGTGGACAAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS GCA 90 bp | CCAGTCATGGTACCCGTGGACAGCGGCTGGATGCGGCGCACAGCTTaGAGCAGCGAGGCCTTGGAGCCATGGGCCCGGAGCGGGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVMVPVDSGWMRRTA*SSEALEPWARSGNS Trigger: AGAGTTCCCGCTCCGGGCCCATGGCTCCAAGGCCTCGCTGCTGCAAGCTGTGCGCCGCATCCAGCCGCTGTCCACGGGTACCATGACTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 90 bp | TGGACAGCGGCTGGATGCGGCGCACAGCTTGCAGCAGCGAGGCCTTaGAGCCATGGGCCCGGAGCGGGAACTCTGGTTTCACAGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WTAAGCGAQLAAARP*SHGPGAGTLVSQCW Trigger: CCAGCACTGTGAAACCAGAGTTCCCGCTCCGGGCCCATGGCTCCAAGGCCTCGCTGCTGCAAGCTGTGCGCCGCATCCAGCCGCTGTCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS TCA 90 bp | TGGGTCGTGTCCGGCAGAGGTGCCCTCTGGGCTGGGGGACAAGACTaGGGCTATCAGGGACCTGTAGCAGCAGCAGCAGCAGGAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WVVSGRGALWAGGQD*GYQGPVAAAAAGAA Trigger: TGCTGCTCCTGCTGCTGCTGCTGCTACAGGTCCCTGATAGCCTCAGTCTTGTCCCCCAGCCCAGAGGGCACCTCTGCCGGACACGACCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 90 bp | AACACCAGGTCCGTGGGTCGTGTCCGGCAGAGGTGCCCTCTGGGCTaGGGGACAAGACTGAGGCTATCAGGGACCTGTAGCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NTRSVGRVRQRCPLG*GTRLRLSGTCSSSS Trigger: GCTGCTGCTGCTACAGGTCCCTGATAGCCTCAGTCTTGTCCCCCAGCCCAGAGGGCACCTCTGCCGGACACGACCCACGGACCTGGTGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CAA 90 bp | CGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGAATCTTCCTCCACAGCATaGCCCACGCCCACCGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSHTSSLRSHLCTHPCSESSSTA*PTPTAN Trigger: GTTTGCGGTGGGCGTGGGCAATGCTGTGGAGGAAGA...TTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CAA 90 bp | GTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGGCCTTAATGTCCTTCTaGGTGTGGAAGCGGCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VAHTPLPCVLTCAHTLALALMSF*VWKRPS Trigger: ACTCGGCCGCTTCCACACCAAGAAGGACATTAAGGC...CAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS TCA 90 bp | CCAAGCCCACCCTCGTGGCATTGGGCCCCACATCCAGTGACTCAATaGCCTGAGACAGGAATACCTTCACCTTCTCAAACTCCACGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSPPSWHWAPHPVTQ*PETGIPSPSQTPRV Trigger: GACCCGTGGAGTTTGAGAAGGTGAAGGTATTCCTGTCTCAGGTCATTGAGTCACTGGATGTGGGGCCCAATGCCACGAGGGTGGGCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 90 bp | CAGCTTCCAGCTTCCTGGTCAGGGCCTGCAGCAGACCCTCCACCTTaGCCTCAAATTTCAGTATGGACTCACAAGCACAGGGGTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QLPASWSGPAADPPP*PQISVWTHKHRGLP Trigger: AGGAAGACCCCTGTGCTTGTGAGTCCATACTGAAATTTGAGGCCAAGGTGGAGGGTCTGCTGCAGGCCCTGACCAGGAAGCTGGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS TCA 90 bp | CCCACCCTCGTGGCATTGGGCCCCACATCCAGTGACTCAATGACCTaGGACAGGAATACCTTCACCTTCTCAAACTCCACGGGTCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: PTLVALGPTSSDSMT*DRNTFTFSNSTGLT Trigger: TGTGAGACCCGTGGAGTTTGAGAAGGTGAAGGTATTCCTGTCTCAGGTCATTGAGTCACTGGATGTGGGGCCCAATGCCACGAGGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS TCA 90 bp | ACACCACGCAGAAGGCCTCTTGGAACTTCTTGGCCAGCTTCTCGATaGCATTGTAGCTCTCCACGTAATCCACGTGCTCGTCCTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPRRRPLGTSWPASR*HCSSPRNPRARPAA Trigger: AGCCGCAGGACGAGCACGTGGATTACGTGGAGAGCTACAATGTCATCGAGAAGCTGGCCAAGAAGTTCCAAGAGGCCTTCTGCGTGGTGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CAA 90 bp | CACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGAAACACACCACGCAGAAGGCCTCTaGGAACTTCTTGGCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HTSSLRSHLCTHPCSETHHAEGL*ELLGQL Trigger: AAGCTGGCCAAGAAGTTCCAAGAGGCCTTCTGCGTG...GTGTGTTTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CAA 90 bp | CATGCTCACAGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCCTTGGTGATGGCGAATaGCAGAGCCAGGCCAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HAHRHHHNTLPADTSMCPLGDGE*QSQASH Trigger: ATGACTGGCCTGGCTCTGCAATTCGCCATCACCAAG...GGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCTGTGAGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS TCA 90 bp | GTAGTTGACCAAGCCCACCCTCGTGGCATTGGGCCCCACATCCAGTaGCTCAATGACCTGAGACAGGAATACCTTCACCTTCTCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: VVDQAHPRGIGPHIQ*LNDLRQEYLHLLKL Trigger: GAGTTTGAGAAGGTGAAGGTATTCCTGTCTCAGGTCATTGAGTCACTGGATGTGGGGCCCAATGCCACGAGGGTGGGCTTGGTCAACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS GCA 90 bp | AATCTGGTTGATGGTCTTGAAGTCAGCTGTGTAAAAGTAGTGGTCTaGCACGGGCTCGGAAGCGATCTCCCTCAGCTCTTCCTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLVDGLEVSCVKVVV*HGLGSDLPQLFLHS Trigger: GCTGTGGAGGAAGAGCTGAGGGAGATCGCTTCCGAGCCCGTGGCAGACCACTACTTTTACACAGCTGACTTCAAGACCATCAACCAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CAA 90 bp | CATGCTCACAGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCGCATCACTCAAGGCCTaGGTGATGGCGAATTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HAHRHHHNTLPADTSMCPASLKA*VMANCR Trigger: TCTGCAATTCGCCATCACCAAGGCCTTGAGTGATGC...GGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCTGTGAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CAA 90 bp | CATGCTCACAGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCGCCTCTTGGAACTTCTaGGCCAGCTTCTCGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: HAHRHHHNTLPADTSMCPASWNF*ASFSMT Trigger: TGTCATCGAGAAGCTGGCCAAGAAGTTCCAAGAGGC...GGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCTGTGAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CAA 90 bp | CGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCACACACCCTTGCTCTGAATTCCTCCACACAGATTaGTTTCTGCAGCTTCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSHTSSLRSHLCTHPCSEFLHTD*FLQLLA Trigger: GGCAAGAAGCTGCAGAAACAAATCTGTGTGGAGGAA...TTCAGAGCAAGGGTGTGTGCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 90 bp | TCAGGGCCTGCAGCAGACCCTCCACCTTGGCCTCAAATTTCAGTATaGACTCACAAGCACAGGGGTCTTCCTCCACACAGATTTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGPAADPPPWPQISV*THKHRGLPPHRFVS Trigger: AGAAACAAATCTGTGTGGAGGAAGACCCCTGTGCTTGTGAGTCCATACTGAAATTTGAGGCCAAGGTGGAGGGTCTGCTGCAGGCCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CAA 90 bp | CATGCTCACAGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCGTGTCCACAATCTGGTaGATGAACTTCTTCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HAHRHHHNTLPADTSMCPVSTIW*MNFFTS Trigger: GCTGGTGAAGAAGTTCATCAACCAGATTGTGGACAC...GGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCTGTGAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CAA 90 bp | AGGCACCATCATAACACACTCCCAGCAGACACAAGCATGTGTCCCCTCCTGCTCTTCTTGCCAATCTGGTaGATGGTCTTGAAGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RHHHNTLPADTSMCPLLLFLPIW*MVLKSA Trigger: AGCTGACTTCAAGACCATCAACCAGATTGGCAAGAA...GAGCAGGAGGGGACACATGCTTGTGTCTGCTGGGAGTGTGTTATGATGGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS-3UTR CAA 90 bp | AAAAATAACGAACGCAGTCGCTCACACACCTCTTCCCTGCGTTCTCACCTGTGCAGCAGACCCTCCACCTaGGCCTCAAATTTCAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: KNNERSRSHTSSLRSHLCSRPST*ASNFSM Trigger: CATACTGAAATTTGAGGCCAAGGTGGAGGGTCTGCT...GCACAGGTGAGAACGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCGTTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS GCA 72 bp | GTACCCGTGGACAGCGGCTGGATGCGGCGCACAGCTTaGAGCAGCGAGGCCTTGGAGCCATGGGCCCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VPVDSGWMRRTA*SSEALEPWARS Trigger: GCTCCGGGCCCATGGCTCCAAGGCCTCGCTGCTGCAAGCTGTGCGCCGCATCCAGCCGCTGTCCACGGGTAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 72 bp | CGCGGCCCACGCCGATGGCGAACAGCTCAATGCCACTaGCCCTCGCGCGCTCAGACACGTCCCGCACGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGPRRWRTAQCH*PSRAQTRPARC Trigger: ACAGCGTGCGGGACGTGTCTGAGCGCGCGAGGGCCAGTGGCATTGAGCTGTTCGCCATCGGCGTGGGCCGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 90 bp | GCCAGTCATGGTACCCGTGGACAGCGGCTGGATGCGGCGCACAGCTaGCAGCAGCGAGGCCTTGGAGCCATGGGCCCGGAGCGGGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: ASHGTRGQRLDAAHS*QQRGLGAMGPEREL Trigger: GAGTTCCCGCTCCGGGCCCATGGCTCCAAGGCCTCGCTGCTGCAAGCTGTGCGCCGCATCCAGCCGCTGTCCACGGGTACCATGACTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS GCA 72 bp | TGTCCACGCGGCCCACGCCGATGGCGAACAGCTCAATaGCACTGGCCCTCGCGCGCTCAGACACGTCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: CPRGPRRWRTAQ*HWPSRAQTRPA Trigger: TGCGGGACGTGTCTGAGCGCGCGAGGGCCAGTGGCATTGAGCTGTTCGCCATCGGCGTGGGCCGCGTGGACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 90 bp | GTGGACAGCGGCTGGATGCGGCGCACAGCTTGCAGCAGCGAGGCCTaGGAGCCATGGGCCCGGAGCGGGAACTCTGGTTTCACAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VDSGWMRRTACSSEA*EPWARSGNSGFTVL Trigger: CAGCACTGTGAAACCAGAGTTCCCGCTCCGGGCCCATGGCTCCAAGGCCTCGCTGCTGCAAGCTGTGCGCCGCATCCAGCCGCTGTCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 72 bp | CGGCGCACAGCTTGCAGCAGCGAGGCCTTGGAGCCATaGGCCCGGAGCGGGAACTCTGGTTTCACAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRTACSSEALEP*ARSGNSGFTVL Trigger: CAGCACTGTGAAACCAGAGTTCCCGCTCCGGGCCCATGGCTCCAAGGCCTCGCTGCTGCAAGCTGTGCGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 72 bp | TCCTGCGGCTCGCTAGCGATCTGTCGCAGCGTAGCCTaGTCCACGCGGCCCACGCCGATGGCGAACAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCGSLAICRSVA*STRPTPMANSS Trigger: TGAGCTGTTCGCCATCGGCGTGGGCCGCGTGGACAAGGCTACGCTGCGACAGATCGCTAGCGAGCCGCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 90 bp | ACGTGCTCGTCCTGCGGCTCGCTAGCGATCTGTCGCAGCGTAGCCTaGTCCACGCGGCCCACGCCGATGGCGAACAGCTCAATGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: TCSSCGSLAICRSVA*STRPTPMANSSMPL Trigger: CAGTGGCATTGAGCTGTTCGCCATCGGCGTGGGCCGCGTGGACAAGGCTACGCTGCGACAGATCGCTAGCGAGCCGCAGGACGAGCACGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS GCA 72 bp | CCGAGTGGGAACTCCTGGCGAATGGAGCTGGAGTACTaGACCAGCCCCACCTGGGCTAGCCTGTCCGACACA | + |
|
Preference number: 6 (lower is better) Translates to: PSGNSWRMELEY*TSPTWASLSDT Trigger: TGTGTCGGACAGGCTAGCCCAGGTGGGGCTGGTGCAGTACTCCAGCTCCATTCGCCAGGAGTTCCCACTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 72 bp | TGGCTCCGGCCATCGGTGAAGACGATGCCCACCTTCTaGGCTCCAGGCCTTGCCCCGCTGGACACAGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: WLRPSVKTMPTF*APGLAPLDTVK Trigger: TTTCACTGTGTCCAGCGGGGCAAGGCCTGGAGCCCAGAAGGTGGGCATCGTCTTCACCGATGGCCGGAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 72 bp | TCGGTGGCTGAGCCGCTTCCACCCCCACGGCAGACATaGCAGGTCTTGCCATCGCTGTTCAGGGTGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SVAEPLPPPRQT*QVLPSLFRVKP Trigger: GGGCTTCACCCTGAACAGCGATGGCAAGACCTGCAATGTCTGCCGTGGGGGTGGAAGCGGCTCAGCCACCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 90 bp | TCGGTGGCTGAGCCGCTTCCACCCCCACGGCAGACATTGCAGGTCTaGCCATCGCTGTTCAGGGTGAAGCCCTCATGGCAGGCACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SVAEPLPPPRQTLQV*PSLFRVKPSWQAQV Trigger: CACCTGTGCCTGCCATGAGGGCTTCACCCTGAACAGCGATGGCAAGACCTGCAATGTCTGCCGTGGGGGTGGAAGCGGCTCAGCCACCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 72 bp | CACTTCGAGAGCTATCGACAACAAACACCAGGTCCGTaGGTCGTGTCCGGCAGAGGTGCCCTCTGGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HFESYRQQTPGP*VVSGRGALWAG Trigger: CCCAGCCCAGAGGGCACCTCTGCCGGACACGACCCACGGACCTGGTGTTTGTTGTCGATAGCTCTCGAAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 72 bp | GAGCCGCTTCCACCCCCACGGCAGACATTGCAGGTCTaGCCATCGCTGTTCAGGGTGAAGCCCTCATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EPLPPPRQTLQV*PSLFRVKPSWQ Trigger: CTGCCATGAGGGCTTCACCCTGAACAGCGATGGCAAGACCTGCAATGTCTGCCGTGGGGGTGGAAGCGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 90 bp | ATGTCGGGGGATCTGGCGCGTCCACCCTCAGCATCACTCAAGGCCTaGGTGATGGCGAATTGCAGAGCCAGGCCAGTCATGGTACCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: MSGDLARPPSASLKA*VMANCRARPVMVPV Trigger: CACGGGTACCATGACTGGCCTGGCTCTGCAATTCGCCATCACCAAGGCCTTGAGTGATGCTGAGGGTGGACGCGCCAGATCCCCCGACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS TCA 72 bp | CAAAGTTCTCAGGCCGCACGCTCTTGGATCCGTCGATaGGGAAGACCAGGTCGGTGGCTGAGCCGCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QSSQAARSWIRR*GRPGRWLSRFH Trigger: GTGGAAGCGGCTCAGCCACCGACCTGGTCTTCCTCATCGACGGATCCAAGAGCGTGCGGCCTGAGAACTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS GCA 72 bp | CGCCCGCTCACAGCTTCCAGCTTCCTGGTCAGGGCCTaGAGCAGACCCTCCACCTTGGCCTCAAATTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RPLTASSFLVRA*SRPSTLASNFS Trigger: ACTGAAATTTGAGGCCAAGGTGGAGGGTCTGCTGCAGGCCCTGACCAGGAAGCTGGAAGCTGTGAGCGGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS TCA 72 bp | GGCAGACATTGCAGGTCTTGCCATCGCTGTTCAGGGTaGAGCCCTCATGGCAGGCACAGGTGTAGGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GRHCRSCHRCSG*SPHGRHRCRSQ Trigger: CTGGCTCCTACACCTGTGCCTGCCATGAGGGCTTCACCCTGAACAGCGATGGCAAGACCTGCAATGTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 72 bp | GAGCCAGGAGAACTAACGCACAGCTGCTCACAATCATaGTCCCCTGTGGCACACAGGTCGGACACCACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EPGELTHSCSQS*SPVAHRSDTTQ Trigger: CTGCGTGGTGTCCGACCTGTGTGCCACAGGGGACCATGATTGTGAGCAGCTGTGCGTTAGTTCTCCTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 72 bp | TGGCGAATGGAGCTGGAGTACTGCACCAGCCCCACCTaGGCTAGCCTGTCCGACACATCTAACGTGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: WRMELEYCTSPT*ASLSDTSNVST Trigger: TGTGGACACGTTAGATGTGTCGGACAGGCTAGCCCAGGTGGGGCTGGTGCAGTACTCCAGCTCCATTCGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 72 bp | ATGTTCCGCACCGCGGCCTTAATGTCCTTCTTGGTGTaGAAGCGGCCGAGTGGGAACTCCTGGCGAATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: MFRTAALMSFLV*KRPSGNSWRME Trigger: CTCCATTCGCCAGGAGTTCCCACTCGGCCGCTTCCACACCAAGAAGGACATTAAGGCCGCGGTGCGGAACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 72 bp | GATCTGGCGCGTCCACCCTCAGCATCACTCAAGGCCTaGGTGATGGCGAATTGCAGAGCCAGGCCAGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: DLARPPSASLKA*VMANCRARPVM Trigger: CATGACTGGCCTGGCTCTGCAATTCGCCATCACCAAGGCCTTGAGTGATGCTGAGGGTGGACGCGCCAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 72 bp | GGCCTTAATGTCCTTCTTGGTGTGGAAGCGGCCGAGTaGGAACTCCTGGCGAATGGAGCTGGAGTACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GLNVLLGVEAAE*ELLANGAGVLH Trigger: GTGCAGTACTCCAGCTCCATTCGCCAGGAGTTCCCACTCGGCCGCTTCCACACCAAGAAGGACATTAAGGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 90 bp | ACAGCTTCCAGCTTCCTGGTCAGGGCCTGCAGCAGACCCTCCACCTaGGCCTCAAATTTCAGTATGGACTCACAAGCACAGGGGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TASSFLVRACSRPST*ASNFSMDSQAQGSS Trigger: GGAAGACCCCTGTGCTTGTGAGTCCATACTGAAATTTGAGGCCAAGGTGGAGGGTCTGCTGCAGGCCCTGACCAGGAAGCTGGAAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS TCA 72 bp | CAAGCCCACCCTCGTGGCATTGGGCCCCACATCCAGTaGCTCAATGACCTGAGACAGGAATACCTTCACCTT | + |
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Preference number: 6 (lower is better) Translates to: QAHPRGIGPHIQ*LNDLRQEYLHL Trigger: AAGGTGAAGGTATTCCTGTCTCAGGTCATTGAGTCACTGGATGTGGGGCCCAATGCCACGAGGGTGGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 72 bp | AGCTTCCTGGTCAGGGCCTGCAGCAGACCCTCCACCTaGGCCTCAAATTTCAGTATGGACTCACAAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SFLVRACSRPST*ASNFSMDSQAQ Trigger: CTGTGCTTGTGAGTCCATACTGAAATTTGAGGCCAAGGTGGAGGGTCTGCTGCAGGCCCTGACCAGGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS GCA 72 bp | GATGGTCTTGAAGTCAGCTGTGTAAAAGTAGTGGTCTaGCACGGGCTCGGAAGCGATCTCCCTCAGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: DGLEVSCVKVVV*HGLGSDLPQLF Trigger: GAAGAGCTGAGGGAGATCGCTTCCGAGCCCGTGGCAGACCACTACTTTTACACAGCTGACTTCAAGACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CCA 72 bp | GCAGCAGACCCTCCACCTTGGCCTCAAATTTCAGTATaGACTCACAAGCACAGGGGTCTTCCTCCACACAGA | + |
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Preference number: 6 (lower is better) Translates to: AADPPPWPQISV*THKHRGLPPHR Trigger: TCTGTGTGGAGGAAGACCCCTGTGCTTGTGAGTCCATACTGAAATTTGAGGCCAAGGTGGAGGGTCTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 72 bp | TGTGGCACACAGGTCGGACACCACGCAGAAGGCCTCTaGGAACTTCTTGGCCAGCTTCTCGATGACATTGTA | + |
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Preference number: 6 (lower is better) Translates to: CGTQVGHHAEGL*ELLGQLLDDIV Trigger: TACAATGTCATCGAGAAGCTGGCCAAGAAGTTCCAAGAGGCCTTCTGCGTGGTGTCCGACCTGTGTGCCACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS TCA 72 bp | GTGGCATTGGGCCCCACATCCAGTGACTCAATGACCTaGGACAGGAATACCTTCACCTTCTCAAACTCCACG | + |
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Preference number: 6 (lower is better) Translates to: VALGPTSSDSMT*DRNTFTFSNST Trigger: CGTGGAGTTTGAGAAGGTGAAGGTATTCCTGTCTCAGGTCATTGAGTCACTGGATGTGGGGCCCAATGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS TCA 72 bp | CCCTCGTGGCATTGGGCCCCACATCCAGTGACTCAATaGCCTGAGACAGGAATACCTTCACCTTCTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: PSWHWAPHPVTQ*PETGIPSPSQT Trigger: AGTTTGAGAAGGTGAAGGTATTCCTGTCTCAGGTCATTGAGTCACTGGATGTGGGGCCCAATGCCACGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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| CDS CAA 72 bp | GGGTCTTCCTCCACACAGATTTGTTTCTGCAGCTTCTaGCCAATCTGGTTGATGGTCTTGAAGTCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GSSSTQICFCSF*PIWLMVLKSAV Trigger: CACAGCTGACTTCAAGACCATCAACCAGATTGGCAAGAAGCTGCAGAAACAAATCTGTGTGGAGGAAGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102576.4 |
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