Pregenerated sensors for MATK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004933Ensembl transcript IDs: ENSMUST00000105328.10, ENSMUST00000117488.8, ENSMUST00000119547.8, ENSMUST00000120265.2, ENSMUST00000121205.8, ENSMUST00000128576.8, ENSMUST00000130282.8
Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACCCCATAAACAGGCAGAGTGGCTCAGGATCCCTCCCCAGCGGGTaGCACAGCTGTGTGGCAGGTGGCAGGGCCCTGGGACCGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: NPINRQSGSGSLPSG*HSCVAGGRALGPMA Trigger: TGCCATCGGTCCCAGGGCCCTGCCACCTGCCACACAGCTGTGTCACCCGCTGGGGAGGGATCCTGAGCCACTCTGCCTGTTTATGGGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR CCA 90 bp | CTGCATCTATGTCCTCTTGCTTTCTGCTTCAGGGATCAGGGGTCCTaGCTCCGTGTGGGAGCTGAGCCCTCAGCCTCCTGTCCCCCAGCG | + |
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Preference number: 1 (lower is better) Translates to: LHLCPLAFCFRDQGS*LRVGAEPSASCPPA Trigger: CGCTGGGGGACAGGAGGCTGAGGGCTCAGCTCCCACACGGAGCCAGGACCCCTGATCCCTGAAGCAGAAAGCAAGAGGACATAGATGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR TCA 90 bp | CTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTGGCTaGATGTGTCTGTTCGCTCAGGACAGCCGGTGGAGGACACACAGG | + |
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Preference number: 1 (lower is better) Translates to: LLRGSCGQDMVTTAG*MCLFAQDSRWRTHR Trigger: CCTGTGTGTCCTCCACCGGCTGTCCTGAGCGAACAGACACATTCAGCCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR GCA 90 bp | CTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTaGTTTCTGCTTCAGGGATCAGGGGTCCTGGCTCCGTGTGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LQSSSWLCDPASMSS*FLLQGSGVLAPCGS Trigger: GCTCCCACACGGAGCCAGGACCCCTGATCCCTGAAGCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CCA 90 bp | AGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTaGCTGAATGTGTCTGTTCGCTCAGGACAGCCGGTGGAGGACACA | + |
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Preference number: 1 (lower is better) Translates to: RAAQRFMWAGHGHHS*LNVSVRSGQPVEDT Trigger: TGTGTCCTCCACCGGCTGTCCTGAGCGAACAGACACATTCAGCCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR GCA 90 bp | CTGCACACCTTGCTCACGTGCTCCATGACAATGTACAAGCCGTGGTaGAGGATCACACCCAGGAGTCGCACTAGGTTCCTGTGCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LHTLLTCSMTMYKPW*RITPRSRTRFLCCS Trigger: GCTGCAGCACAGGAACCTAGTGCGACTCCTGGGTGTGATCCTGCACCACGGCTTGTACATTGTCATGGAGCACGTGAGCAAGGTGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CCA 90 bp | ACCCTGCACACCTTGCTCACGTGCTCCATGACAATGTACAAGCCGTaGTGCAGGATCACACCCAGGAGTCGCACTAGGTTCCTGTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: TLHTLLTCSMTMYKP*CRITPRSRTRFLCC Trigger: GCAGCACAGGAACCTAGTGCGACTCCTGGGTGTGATCCTGCACCACGGCTTGTACATTGTCATGGAGCACGTGAGCAAGGTGTGCAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR TCA 90 bp | TACCTTCCTGGATGGAATGTCACTTACAGAGCAAACTGCAGAAGCTaGGAGGTGCTCACAAGAGCACGGCCCCGCGTGCGCAGGAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: YLPGWNVTYRANCRS*EVLTRARPRVRRKF Trigger: GAACTTCCTGCGCACGCGGGGCCGTGCTCTTGTGAGCACCTCTCAGCTTCTGCAGTTTGCTCTGTAAGTGACATTCCATCCAGGAAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR GCA 90 bp | CAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTaGAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: QMLFMECPRHGGLRG*RALPGSVTLHLCPL Trigger: AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| 3UTR GCA 90 bp | TGGGTAGGGACTTTGGGTGATATCACAGACATCAACACTCAGGGCTaGTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: WVGTLGDITDINTQG*SEVHVGRTWSPQLA Trigger: AGCCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACCCAAAGTCCCTACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR CCA 90 bp | AGGCCGGCTCACCTTGGAGTCAGGCCTCAGTTTCCCCTTCCACTTTaGGACCTACCTTCCTGGATGGAATGTCACTTACAGAGCAAACTG | + |
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Preference number: 1 (lower is better) Translates to: RPAHLGVRPQFPLPL*DLPSWMECHLQSKL Trigger: CAGTTTGCTCTGTAAGTGACATTCCATCCAGGAAGGTAGGTCCCAAAGTGGAAGGGGAAACTGAGGCCTGACTCCAAGGTGAGCCGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR TCA 90 bp | TCACAGCCGTCTCATCCAGGAAGGCCTGGGCTGTCACATCACACTTaGTATTCTTCACAGCCACCTTCTGTCCCAGGTACTCACCCTGTA | + |
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Preference number: 1 (lower is better) Translates to: SQPSHPGRPGLSHHT*YSSQPPSVPGTHPV Trigger: TACAGGGTGAGTACCTGGGACAGAAGGTGGCTGTGAAGAATATCAAGTGTGATGTGACAGCCCAGGCCTTCCTGGATGAGACGGCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CCA 90 bp | GGAGTCAGGCCTCAGTTTCCCCTTCCACTTTGGGACCTACCTTCCTaGATGGAATGTCACTTACAGAGCAAACTGCAGAAGCTGAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: GVRPQFPLPLWDLPS*MECHLQSKLQKLRG Trigger: ACCTCTCAGCTTCTGCAGTTTGCTCTGTAAGTGACATTCCATCCAGGAAGGTAGGTCCCAAAGTGGAAGGGGAAACTGAGGCCTGACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAAACAATCCCAGGCTACTCTCCTCCTCTGTCCTAAGCCCAGGCCTGCTTGACTGGCAGCCGGCTTaGGTCCAGCCCCTTGCGCTC | + |
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Preference number: 2 (lower is better) Translates to: PGNNPRLLSSSVLSPGLLDWQPA*VQPLAL Trigger: GAGCGCAAGGGGCTGGACTCAAGCCGGCTGCCAGTC...AAGCAGGCCTGGGCTTAGGACAGAGGAGGAGAGTAGCCTGGGATTGTTTCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTGGCAGGGCCCTGGGACCGATGGCAAGTAGATCTCTAGCCTGGCTGTTCGCTCAGAGGTTCATGTaGGCAGGACATGGTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: AGGRALGPMASRSLAWLFAQRFM*AGHGHH Trigger: GTGGTGACCATGTCCTGCCCACATGAACCTCTGAGC...GAACAGCCAGGCTAGAGATCTACTTGCCATCGGTCCCAGGGCCCTGCCACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGATATCACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGGGAGTGTCCCAGGCATaGGGGTCTCAGGGGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GDITDINTQGCSEVHVGRGVSQA*GSQGLQ Trigger: CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCC...CCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCTGGAAACAATCCCAGGCTACTCTCCTCCTCTGTCCTAAGCCCAGGCCTAAGGCCGGCTCACCTTaGAGTCAGGCCTCAGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PPWKQSQATLLLCPKPRPKAGSP*SQASVS Trigger: GGAAACTGAGGCCTGACTCCAAGGTGAGCCGGCCTT...AGGCCTGGGCTTAGGACAGAGGAGGAGAGTAGCCTGGGATTGTTTCCAGGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGTGATATCACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCGCTCAGGACAGCCGGTaGAGGACACACAGGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: LGDITDINTQGCSEVHVGAQDSR*RTHRHQ Trigger: CTGATGCCTGTGTGTCCTCCACCGGCTGTCCTGAGC...GCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTGGCCCATGCAGAGAAAGTaGGTAGGGACTTTGGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: TLRAAQRFMWAGHGHHSWPMQRK*VGTLGD Trigger: ATCACCCAAAGTCCCTACCCACTTTCTCTGCATGGG...CCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR CAA 90 bp | CATGCCTTCAGCAACATGACTAGAGACAGACAAGGCCGGCTCACCTaGGAGTCAGGCCTCAGTTTCCCCTTCCACTTTGGGACCTACCTT | + |
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Preference number: 2 (lower is better) Translates to: HAFSNMTRDRQGRLT*ESGLSFPFHFGTYL Trigger: AAGGTAGGTCCCAAAGTGGAAGGGGAAACTGAGGCCTGACTCCAAGGTGAGCCGGCCTTGTCTGTCTCTAGTCATGTTGCTGAAGGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CAA 90 bp | GGTCAGGCCTGTAGTCTGCCCATGCAGAGAAAGTGGGTAGGGACTTaGGGTGATATCACAGACATCAACACTCAGGGCTGCTCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: GQACSLPMQRKWVGT*GDITDINTQGCSEV Trigger: AACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACCCAAAGTCCCTACCCACTTTCTCTGCATGGGCAGACTACAGGCCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR CAA 90 bp | ATCACAGCCGTCTCATCCAGGAAGGCCTGGGCTGTCACATCACACTaGATATTCTTCACAGCCACCTTCTGTCCCAGGTACTCACCCTGT | + |
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Preference number: 2 (lower is better) Translates to: ITAVSSRKAWAVTSH*IFFTATFCPRYSPC Trigger: ACAGGGTGAGTACCTGGGACAGAAGGTGGCTGTGAAGAATATCAAGTGTGATGTGACAGCCCAGGCCTTCCTGGATGAGACGGCTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CAA 90 bp | AAGGCCGGCTCACCTTGGAGTCAGGCCTCAGTTTCCCCTTCCACTTaGGGACCTACCTTCCTGGATGGAATGTCACTTACAGAGCAAACT | + |
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Preference number: 2 (lower is better) Translates to: KAGSPWSQASVSPST*GPTFLDGMSLTEQT Trigger: AGTTTGCTCTGTAAGTGACATTCCATCCAGGAAGGTAGGTCCCAAAGTGGAAGGGGAAACTGAGGCCTGACTCCAAGGTGAGCCGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR-3UTR CCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCTaGCTCTGTGACCCTGCATCT | + |
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Preference number: 2 (lower is better) Translates to: KILPNALYGVSQAWGSQGLQSSS*LCDPAS Trigger: AGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAG...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGATATCACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGCCTCACACTTGGGAGTaGCCCTTTAGGCTAGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: GDITDINTQGCSEVHVGRPHTWE*PFRLAL Trigger: TAAAGCTAGCCTAAAGGGTCACTCCCAAGTGTGAGG...CCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTAGGAGGAATGTTGTAGGCCTAGGGCTCACTGGAGAGGCAACCATTTCCGAAGCTCAGAGAGGTTaGGGGGTGCACATAGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: SSRRNVVGLGLTGEATISEAQRG*GVHIVS Trigger: TGACACTATGTGCACCCCTCAACCTCTCTGAGCTTC...GGAAATGGTTGCCTCTCCAGTGAGCCCTAGGCCTACAACATTCCTCCTAGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR-3UTR TCA 90 bp | GACACACAGGCATCAGACAGTTGTACAAAATCCTTCCAAATGCTCTTTATGGAGTGCTCACCCCGTTTTTaGGAGCCTCAGGTGCCGTCC | + |
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Preference number: 2 (lower is better) Translates to: DTQASDSCTKSFQMLFMECSPRF*EPQVPS Trigger: GGACGGCACCTGAGGCTCTCAAAAACGGGGTGAGCA...CTCCATAAAGAGCATTTGGAAGGATTTTGTACAACTGTCTGATGCCTGTGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR-3UTR TCA 90 bp | GACACACAGGCATCAGACAGTTGTACAAAATCCTTCCAAATGCTCTTTATGGAGCCTCACACTTGGGAGTaGCCCTTTAGGCTAGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: DTQASDSCTKSFQMLFMEPHTWE*PFRLAL Trigger: TAAAGCTAGCCTAAAGGGTCACTCCCAAGTGTGAGG...CTCCATAAAGAGCATTTGGAAGGATTTTGTACAACTGTCTGATGCCTGTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR GCA 72 bp | CACTGCGGAGCTCACGGCCCAGCTTCTCCACTATTTTaGGGAAGGGTGGTCGGCGCGCAGGCTCTGCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: HCGAHGPASPLF*GRVVGAQALPP Trigger: GGGAGGCAGAGCCTGCGCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGCTGGGCCGTGAGCTCCGCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CCA 72 bp | CTTTCTGCTTCAGGGATCAGGGGTCCTGGCTCCGTGTaGGAGCTGAGCCCTCAGCCTCCTGTCCCCCAGCGG | + |
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Preference number: 3 (lower is better) Translates to: LSASGIRGPGSV*ELSPQPPVPQR Trigger: CCGCTGGGGGACAGGAGGCTGAGGGCTCAGCTCCCACACGGAGCCAGGACCCCTGATCCCTGAAGCAGAAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGCTCAGGATCCCTCCCCAGCGGGTGACACAGCTGTGTGGCAGGTGGCAGGGAGGAAGTTCACCAGGTaGCCCTGTTTAAGGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: VAQDPSPAGDTAVWQVAGRKFTR*PCLRGG Trigger: CCCTCCCCTTAAACAGGGCAACCTGGTGAACTTCCT...CCCTGCCACCTGCCACACAGCTGTGTCACCCGCTGGGGAGGGATCCTGAGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CCA 72 bp | AAACTCCAGACATCCGACTTGCTGGAGAACCGCTGTTaGGGCAGAGGTCAGGGTGAGGAGAGCCCCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: KLQTSDLLENRC*GRGQGEESPSG Trigger: GCCAGAGGGGCTCTCCTCACCCTGACCTCTGCCCCAACAGCGGTTCTCCAGCAAGTCGGATGTCTGGAGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CCA 72 bp | TGTCCTCTTGCTTTCTGCTTCAGGGATCAGGGGTCCTaGCTCCGTGTGGGAGCTGAGCCCTCAGCCTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: CPLAFCFRDQGS*LRVGAEPSASC Trigger: ACAGGAGGCTGAGGGCTCAGCTCCCACACGGAGCCAGGACCCCTGATCCCTGAAGCAGAAAGCAAGAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR TCA 72 bp | GGTTCATGTGGGCAGGACATGGTCACCACAGCTGGCTaGATGTGTCTGTTCGCTCAGGACAGCCGGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GSCGQDMVTTAG*MCLFAQDSRWR Trigger: CCTCCACCGGCTGTCCTGAGCGAACAGACACATTCAGCCAGCTGTGGTGACCATGTCCTGCCCACATGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR TCA 72 bp | CACCCACCACCCTGCACACCTTGCTCACGTGCTCCATaGCAATGTACAAGCCGTGGTGCAGGATCACACCCA | + |
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Preference number: 3 (lower is better) Translates to: HPPPCTPCSRAP*QCTSRGAGSHP Trigger: TGGGTGTGATCCTGCACCACGGCTTGTACATTGTCATGGAGCACGTGAGCAAGGTGTGCAGGGTGGTGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR TCA 72 bp | GGATGGAATGTCACTTACAGAGCAAACTGCAGAAGCTaGGAGGTGCTCACAAGAGCACGGCCCCGCGTGCGC | + |
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Preference number: 3 (lower is better) Translates to: GWNVTYRANCRS*EVLTRARPRVR Trigger: GCGCACGCGGGGCCGTGCTCTTGTGAGCACCTCTCAGCTTCTGCAGTTTGCTCTGTAAGTGACATTCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR GCA 72 bp | GGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTCTaGTTCAGGGATCAGGGGTCCTGGCTCCGTGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: GSVTLHLCPLAF*FRDQGSWLRVG Trigger: TCCCACACGGAGCCAGGACCCCTGATCCCTGAAGCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CCA 72 bp | CAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTaGCTGAATGTGTCTGTTCGCTCAGGACAGCCGGTG | + |
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Preference number: 3 (lower is better) Translates to: QRFMWAGHGHHS*LNVSVRSGQPV Trigger: CACCGGCTGTCCTGAGCGAACAGACACATTCAGCCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR-3UTR CAA 90 bp | ACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTGGGGCAACCATTTCCCCTaGAAGCTCAGAGAGGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: TLRAAQRFMWAGHGHHSWGNHFP*KLREVE Trigger: CTCAACCTCTCTGAGCTTCAAGGGGAAATGGTTGCC...CCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR GCA 72 bp | TTGCTCACGTGCTCCATGACAATGTACAAGCCGTGGTaGAGGATCACACCCAGGAGTCGCACTAGGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LLTCSMTMYKPW*RITPRSRTRFL Trigger: CAGGAACCTAGTGCGACTCCTGGGTGTGATCCTGCACCACGGCTTGTACATTGTCATGGAGCACGTGAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CCA 72 bp | ACCTTGCTCACGTGCTCCATGACAATGTACAAGCCGTaGTGCAGGATCACACCCAGGAGTCGCACTAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: TLLTCSMTMYKP*CRITPRSRTRF Trigger: GAACCTAGTGCGACTCCTGGGTGTGATCCTGCACCACGGCTTGTACATTGTCATGGAGCACGTGAGCAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR CCA 72 bp | TCCTCCTCTGTCCTAAGCCCAGGCCTGCTTCAGAGATaGGGAATCAGGCTGAGGGAAGTTCTAGGAGGAATG | + |
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Preference number: 3 (lower is better) Translates to: SSSVLSPGLLQR*GIRLREVLGGM Trigger: CATTCCTCCTAGAACTTCCCTCAGCCTGATTCCCCATCTCTGAAGCAGGCCTGGGCTTAGGACAGAGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGATATCACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGTGCATCTATGTCCTCTaGCTTTCTGCTTCAGGGATC | + |
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Preference number: 3 (lower is better) Translates to: GDITDINTQGCSEVHVGRCIYVL*LSASGI Trigger: GATCCCTGAAGCAGAAAGCAAGAGGACATAGATGCA...CCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR TCA 72 bp | TCTGCCCATGCAGAGAAAGTGGGTAGGGACTTTGGGTaGTATCACAGACATCAACACTCAGGGCTGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: SAHAEKVGRDFG*YHRHQHSGLLR Trigger: TCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACCCAAAGTCCCTACCCACTTTCTCTGCATGGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR TCA 72 bp | GAGAGGCAACCATTTCCCCTTGAAGCTCAGAGAGGTTaGGGGGTGCACATAGTGTCACAGAGCACAATCAAG | + |
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Preference number: 3 (lower is better) Translates to: ERQPFPLEAQRG*GVHIVSQSTIK Trigger: CTTGATTGTGCTCTGTGACACTATGTGCACCCCTCAACCTCTCTGAGCTTCAAGGGGAAATGGTTGCCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| 3UTR GCA 72 bp | ACTTTGGGTGATATCACAGACATCAACACTCAGGGCTaGTCAGAGGTTCATGTGGGCAGGACATGGTCACCA | + |
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Preference number: 3 (lower is better) Translates to: TLGDITDINTQG*SEVHVGRTWSP Trigger: TGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACCCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| 3UTR-3UTR CAA 90 bp | CACGTGCTCCATGACAATGTACAAGCCGTGGTGCAGGATCACACCCAGGAGTCGACAGGCATCAGACAGTaGTACAAAATCCTTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: HVLHDNVQAVVQDHTQESTGIRQ*YKILPN Trigger: ATTTGGAAGGATTTTGTACAACTGTCTGATGCCTGT...CGACTCCTGGGTGTGATCCTGCACCACGGCTTGTACATTGTCATGGAGCACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
||
| 3UTR-3UTR CAA 90 bp | GACACACAGGCATCAGACAGTTGTACAAAATCCTTCCAAATGCTCTTTATGGAGCTGCTCACCCCGTTTTaGAGAGCCTCAGGTGCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: DTQASDSCTKSFQMLFMELLTPF*RASGAV Trigger: GACGGCACCTGAGGCTCTCAAAAACGGGGTGAGCAG...CTCCATAAAGAGCATTTGGAAGGATTTTGTACAACTGTCTGATGCCTGTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
||
| 3UTR CCA 72 bp | AAAGGTCAGGCCTGTAGTCTGCCCATGCAGAGAAAGTaGGTAGGGACTTTGGGTGATATCACAGACATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: KGQACSLPMQRK*VGTLGDITDIN Trigger: GTTGATGTCTGTGATATCACCCAAAGTCCCTACCCACTTTCTCTGCATGGGCAGACTACAGGCCTGACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
||
| 3UTR CCA 72 bp | CCTCAGTTTCCCCTTCCACTTTGGGACCTACCTTCCTaGATGGAATGTCACTTACAGAGCAAACTGCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PQFPLPLWDLPS*MECHLQSKLQK Trigger: CTTCTGCAGTTTGCTCTGTAAGTGACATTCCATCCAGGAAGGTAGGTCCCAAAGTGGAAGGGGAAACTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGGCATCAGACAGTaGTACAAAATCCTTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RHQHSGLLRGSCGQDMVTTGIRQ*YKILPN Trigger: ATTTGGAAGGATTTTGTACAACTGTCTGATGCCTGT...GGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
||
| 3UTR GCA 72 bp | CACAGGCATCAGACAGTTGTACAAAATCCTTCCAAATaGTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HRHQTVVQNPSK*SLWSVPGMGVS Trigger: TGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTTGTACAACTGTCTGATGCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGATCCCTCCCCAGCGGGTGACACAGCTGTGTGGCAGGTGGCAGGGCCCTCCCAGCAGCTACCCATaGGGGTGTGCACAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRIPPQRVTQLCGRWQGPPSSYP*GCAQSL Trigger: CAGGCTCTGTGCACACCCTCATGGGTAGCTGCTGGG...AGGGCCCTGCCACCTGCCACACAGCTGTGTCACCCGCTGGGGAGGGATCCTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| 3UTR CAA 72 bp | ACACTGCGGAGCTCACGGCCCAGCTTCTCCACTATTTaGCGGAAGGGTGGTCGGCGCGCAGGCTCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLRSSRPSFSTI*RKGGRRAGSAS Trigger: GGAGGCAGAGCCTGCGCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGCTGGGCCGTGAGCTCCGCAGTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
||
| CDS-3UTR TCA 90 bp | CCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCGACTGGCAGCCGGCTTaGGTCCAGCCCCTTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PNALYGVSQAWGSQGLQSDWQPA*VQPLAL Trigger: GAGCGCAAGGGGCTGGACTCAAGCCGGCTGCCAGTC...GCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCGAGCACGGCCCCGCGTaGGCAGGAAGTTCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSEHGPA*AGSSPG Trigger: ACCTGGTGAACTTCCTGCGCACGCGGGGCCGTGCTC...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCCCGAGACACCCACACTaGGGAGCTCACGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSPRHPH*GAHGPA Trigger: AGCTGGGCCGTGAGCTCCGCAGTGTGGGTGTCTCGG...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCCAGCCCGTCCTCGGGTaGCTGCAGCTGCTGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSQPVLG*LQLLYG Trigger: GCCATACAGCAGCTGCAGCCACCCGAGGACGGGCTG...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR TCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTGACTGGCAGCCGGCTTaGGTCCAGCCCCTTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSDWQPA*VQPLAL Trigger: GAGCGCAAGGGGCTGGACTCAAGCCGGCTGCCAGTC...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCCCCAGCAGCTACCCATaGGGGTGTGCACAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSPSSYP*GCAQSL Trigger: CAGGCTCTGTGCACACCCTCATGGGTAGCTGCTGGG...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTCCGTGTGGGAGCTaGGCCCTCAGCCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLAPCGS*ALSLLS Trigger: GGACAGGAGGCTGAGGGCTCAGCTCCCACACGGAGC...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGGCTCCGTGTGGGAGCTaGGCCCTCAGCCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQAPCGS*ALSLLS Trigger: GGACAGGAGGCTGAGGGCTCAGCTCCCACACGGAGC...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTGCTCCGTGTGGGAGCTaGGCCCTCAGCCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSAPCGS*ALSLLS Trigger: GGACAGGAGGCTGAGGGCTCAGCTCCCACACGGAGC...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCCGAGACACCCACACTaGGGAGCTCACGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLWSVPGMGVSGAAELFPRHPH*GAHGPA Trigger: AGCTGGGCCGTGAGCTCCGCAGTGTGGGTGTCTCGG...GAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | CCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCCAGCCCGTCCTCGGGTaGCTGCAGCTGCTGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PNALYGVSQAWGSQGLQSQPVLG*LQLLYG Trigger: GCCATACAGCAGCTGCAGCCACCCGAGGACGGGCTG...GCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| 3UTR CAA 72 bp | GGCAGCCGGCTTGAGTCCAGCCCCTTGCGCTCTGCCTaGGCTAAGCCAAAGTCACTGACCTTGGCCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRLESSPLRSA*AKPKSLTLATK Trigger: CTTGGTGGCCAAGGTCAGTGACTTTGGCTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAAGCCGGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
||
| CDS-3UTR TCA 90 bp | CACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCGCTCCGTGTGGGAGCTaGGCCCTCAGCCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRHQHSGLLRGSCGQDMVAPCGS*ALSLLS Trigger: GGACAGGAGGCTGAGGGCTCAGCTCCCACACGGAGC...GACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCTCGGGTGGCTGCAGCTaGTGTATGGCTTCCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CSLWSVPGMGVSGAAELFSGGCS*CMASWP Trigger: CGGCCAGGAAGCCATACAGCAGCTGCAGCCACCCGA...GAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR GCA 90 bp | ACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTGGTCGGGTGGCTGCAGCTaGTGTATGGCTTCCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TLRAAQRFMWAGHGHHSWSGGCS*CMASWP Trigger: CGGCCAGGAAGCCATACAGCAGCTGCAGCCACCCGA...CCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTGGCTGAATGTGAGCACGGCCCCGCGTaGGCAGGAAGTTCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GCSEVHVGRTWSPQLAECEHGPA*AGSSPG Trigger: ACCTGGTGAACTTCCTGCGCACGCGGGGCCGTGCTC...ACATTCAGCCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR GCA 90 bp | CCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCACGGCCCCGCGTaGGCAGGAAGTTCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSKCSLWSVPGMGVSGAAEHGPA*AGSSPG Trigger: ACCTGGTGAACTTCCTGCGCACGCGGGGCCGTGCTC...TGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCCTACCCATGAGGGTGTaGACAGAGCCTGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSLPMRV*TEPGQP Trigger: TGGCTGCCCAGGCTCTGTGCACACCCTCATGGGTAG...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTCCGAGACACCCACACTaGGGAGCTCACGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGCRALPGSVTLHLCPLAPRHPH*GAHGPA Trigger: AGCTGGGCCGTGAGCTCCGCAGTGTGGGTGTCTCGG...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCCCGAGACACCCACACTaGGGAGCTCACGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KCSLWSVPGMGVSGAAELPRHPH*GAHGPA Trigger: AGCTGGGCCGTGAGCTCCGCAGTGTGGGTGTCTCGG...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCAGCCCGTCCTCGGGTaGCTGCAGCTGCTGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALQPVLG*LQLLYG Trigger: GCCATACAGCAGCTGCAGCCACCCGAGGACGGGCTG...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTCAGCCCGTCCTCGGGTaGCTGCAGCTGCTGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSQPVLG*LQLLYG Trigger: GCCATACAGCAGCTGCAGCCACCCGAGGACGGGCTG...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCACAGCCCGTCCTCGGGTaGCTGCAGCTGCTGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSKCSLWSVPGMGVSGAAQPVLG*LQLLYG Trigger: GCCATACAGCAGCTGCAGCCACCCGAGGACGGGCTG...TGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCCAGCCCGTCCTCGGGTaGCTGCAGCTGCTGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFQMLFMECPRHGGLRGCQPVLG*LQLLYG Trigger: GCCATACAGCAGCTGCAGCCACCCGAGGACGGGCTG...GCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCGTAGCCAGCCAGCCTTaGCGAGCTCCTCCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLWSVPGMGVSGAAELFVASQP*RAPPLQ Trigger: CTGCAGAGGAGGAGCTCGCCAAGGCTGGCTGGCTAC...GAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | GGTGATATCACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGGACTGGCAGCCGGCTTaGGTCCAGCCCCTTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GDITDINTQGCSEVHVGRDWQPA*VQPLAL Trigger: GAGCGCAAGGGGCTGGACTCAAGCCGGCTGCCAGTC...CCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR TCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGCAGGTGCCGTCCACTTaGCTGGCAGCCGGCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQQVPST*LAAGLS Trigger: ACTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTG...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTCAGGTGCCGTCCACTTaGCTGGCAGCCGGCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGCRALPGSVTLHLCPLAQVPST*LAAGLS Trigger: ACTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTG...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCACAGGTGCCGTCCACTTaGCTGGCAGCCGGCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSKCSLWSVPGMGVSGAAQVPST*LAAGLS Trigger: ACTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTG...TGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTCAGGTGCCGTCCACTTaGCTGGCAGCCGGCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLQVPST*LAAGLS Trigger: ACTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTG...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGCCCAGCAGCTACCCATaGGGGTGTGCACAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQPSSYP*GCAQSL Trigger: CAGGCTCTGTGCACACCCTCATGGGTAGCTGCTGGG...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCCCCAGCAGCTACCCATaGGGGTGTGCACAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCSLWSVPGMGVSGAAELPSSYP*GCAQSL Trigger: CAGGCTCTGTGCACACCCTCATGGGTAGCTGCTGGG...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTCCCAGCAGCTACCCATaGGGGTGTGCACAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSPSSYP*GCAQSL Trigger: CAGGCTCTGTGCACACCCTCATGGGTAGCTGCTGGG...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTGCCCTTCCTGCCCACTaGCATGGTGCTTGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALALPAH*HGAWLG Trigger: ACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGC...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTGCCCTTCCTGCCCACTaGCATGGTGCTTGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSALPAH*HGAWLG Trigger: ACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGC...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCCCTTCCTGCCCACTaGCATGGTGCTTGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLALPAH*HGAWLG Trigger: ACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGC...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTCGGGTGGCTGCAGCTaGTGTATGGCTTCCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGCRALPGSVTLHLCPLASGGCS*CMASWP Trigger: CGGCCAGGAAGCCATACAGCAGCTGCAGCCACCCGA...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTTCGGGTGGCTGCAGCTaGTGTATGGCTTCCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALSGGCS*CMASWP Trigger: CGGCCAGGAAGCCATACAGCAGCTGCAGCCACCCGA...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGTCGGGTGGCTGCAGCTaGTGTATGGCTTCCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQSGGCS*CMASWP Trigger: CGGCCAGGAAGCCATACAGCAGCTGCAGCCACCCGA...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR GCA 90 bp | CCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCGCAGAAGCTGAGAGGTaGTCACAAGAGCACGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PNALYGVSQAWGSQGLQSAEAER*SQEHGP Trigger: GGGGCCGTGCTCTTGTGAGCACCTCTCAGCTTCTGC...GCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTGCAGCCAGGTCCCGGTaGACCAGCTTCTTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALAARSR*TSFLLS Trigger: GGAGAGCAAGAAGCTGGTGCACCGGGACCTGGCTGC...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCGCAGCCAGGTCCCGGTaGACCAGCTTCTTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFQMLFMECPRHGGLRGCAARSR*TSFLLS Trigger: GGAGAGCAAGAAGCTGGTGCACCGGGACCTGGCTGC...GCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTGCAGCCAGGTCCCGGTaGACCAGCTTCTTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGCRALPGSVTLHLCPLAAARSR*TSFLLS Trigger: GGAGAGCAAGAAGCTGGTGCACCGGGACCTGGCTGC...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCGCAGCCAGGTCCCGGTaGACCAGCTTCTTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KCSLWSVPGMGVSGAAELAARSR*TSFLLS Trigger: GGAGAGCAAGAAGCTGGTGCACCGGGACCTGGCTGC...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCTACCCATGAGGGTGTaGACAGAGCCTGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLWSVPGMGVSGAAELFLPMRV*TEPGQP Trigger: TGGCTGCCCAGGCTCTGTGCACACCCTCATGGGTAG...GAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCGCTGCAGCTGCTGTATaGCTTCCTGGCCGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSAAAAV*LPGRRS Trigger: AGATCTCCGGCCAGGAAGCCATACAGCAGCTGCAGC...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | CAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTGTAGCCAGCCAGCCTTaGCGAGCTCCTCCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QMLFMECPRHGGLRGCRAVASQP*RAPPLQ Trigger: CTGCAGAGGAGGAGCTCGCCAAGGCTGGCTGGCTAC...AGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGTAGCCAGCCAGCCTTaGCGAGCTCCTCCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLVASQP*RAPPLQ Trigger: CTGCAGAGGAGGAGCTCGCCAAGGCTGGCTGGCTAC...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR TCA 90 bp | GCAGGTGGCAGGGCCCTGGGACCGATGGCAAGTAGATCTCTAGCCTGGCTGTTCCTAAGCCAAAGTCACTaGCCTTGGCCACCAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGGRALGPMASRSLAWLFLSQSH*PWPPSP Trigger: AGGACTTGGTGGCCAAGGTCAGTGACTTTGGCTTAG...GAACAGCCAGGCTAGAGATCTACTTGCCATCGGTCCCAGGGCCCTGCCACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR TCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGGACTGGCAGCCGGCTTaGGTCCAGCCCCTTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KILPNALYGVSQAWGSQGDWQPA*VQPLAL Trigger: GAGCGCAAGGGGCTGGACTCAAGCCGGCTGCCAGTC...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS-3UTR TCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTAGAACCGCCCGTTTTTaGGAGCCTCAGGTGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLRTARF*EPQVPS Trigger: GGACGGCACCTGAGGCTCTCAAAAACGGGCGGTTCT...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGAACCGCCCGTTTTTaGGAGCCTCAGGTGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQRTARF*EPQVPS Trigger: GGACGGCACCTGAGGCTCTCAAAAACGGGCGGTTCT...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR TCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGGCTCCGTGTGGGAGCTaGGCCCTCAGCCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KILPNALYGVSQAWGSQGAPCGS*ALSLLS Trigger: GGACAGGAGGCTGAGGGCTCAGCTCCCACACGGAGC...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS-3UTR GCA 90 bp | ATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGGCCCTTCCTGCCCACTaGCATGGTGCTTGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILPNALYGVSQAWGSQGLALPAH*HGAWLG Trigger: ACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGC...CAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCCCCCTCTCCAATCTGTaGTCCCAGAGTCAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSPLSNL*SQSQML Trigger: CAGCATCTGACTCTGGGAGCACAGATTGGAGAGGGG...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR GCA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTGCAGAAGCTGAGAGGTaGTCACAAGAGCACGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGCRALPGSVTLHLCPLAAEAER*SQEHGP Trigger: GGGGCCGTGCTCTTGTGAGCACCTCTCAGCTTCTGC...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR GCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTGCAGAAGCTGAGAGGTaGTCACAAGAGCACGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALAEAER*SQEHGP Trigger: GGGGCCGTGCTCTTGTGAGCACCTCTCAGCTTCTGC...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCGCAGAAGCTGAGAGGTaGTCACAAGAGCACGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFQMLFMECPRHGGLRGCAEAER*SQEHGP Trigger: GGGGCCGTGCTCTTGTGAGCACCTCTCAGCTTCTGC...GCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTGCAGAAGCTGAGAGGTaGTCACAAGAGCACGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QMLFMECPRHGGLRGCRAAEAER*SQEHGP Trigger: GGGGCCGTGCTCTTGTGAGCACCTCTCAGCTTCTGC...AGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | AGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCGCAGCCAGGTCCCGGTaGACCAGCTTCTTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHQHSGLLRGSCGQDMVTAARSR*TSFLLS Trigger: GGAGAGCAAGAAGCTGGTGCACCGGGACCTGGCTGC...GGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCTTGAGTCCAGCCCCTTaGGCTCTGCCTTGGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLWSVPGMGVSGAAELFLSPAP*ALPWLS Trigger: GCTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAA...GAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTCTACCCATGAGGGTGTaGACAGAGCCTGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSLPMRV*TEPGQP Trigger: TGGCTGCCCAGGCTCTGTGCACACCCTCATGGGTAG...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTCTACCCATGAGGGTGTaGACAGAGCCTGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLLPMRV*TEPGQP Trigger: TGGCTGCCCAGGCTCTGTGCACACCCTCATGGGTAG...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | CCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCGCTTCTCCACTATTTTaGGGAAGGGTGGTCGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PNALYGVSQAWGSQGLQSASPLF*GRVVGA Trigger: CGCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGC...GCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | AATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTCCGAGACACCCACACTaGGGAGCTCACGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPSKCSLWSVPGMGVSGAPRHPH*GAHGPA Trigger: AGCTGGGCCGTGAGCTCCGCAGTGTGGGTGTCTCGG...AGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCGCTGCAGCTGCTGTATaGCTTCCTGGCCGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLWSVPGMGVSGAAELFAAAAV*LPGRRS Trigger: AGATCTCCGGCCAGGAAGCCATACAGCAGCTGCAGC...GAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | CCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCCCAGCTTGGTGCAGATaGCCCCCTTGTCCTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNALYGVSQAWGSQGLQSPAWCR*PPCPWC Trigger: ACACCAAGGACAAGGGGGCCATCTGCACCAAGCTGG...GCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCTTGGCTTCACCAGCTTaGTGCAGATGGCCCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSLASPA*CRWPPC Trigger: ACAAGGGGGCCATCTGCACCAAGCTGGTGAAGCCAA...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCATATTTTGCGGAAGGGTaGTCGGCGCGCAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSKCSLWSVPGMGVSGAAYFAEG*SARRLC Trigger: GCAGAGCCTGCGCGCCGACCACCCTTCCGCAAAATA...TGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTATTTTGCGGAAGGGTaGTCGGCGCGCAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGCRALPGSVTLHLCPLAYFAEG*SARRLC Trigger: GCAGAGCCTGCGCGCCGACCACCCTTCCGCAAAATA...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCTGCTCACGTGCTCCATaGCAATGTACAAGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSCSRAP*QCTSRG Trigger: ACCACGGCTTGTACATTGTCATGGAGCACGTGAGCA...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTCAGGTGCCGTCCACTTaGCTGGCAGCCGGCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NPSKCSLWSVPGMGVSGAQVPST*LAAGLS Trigger: ACTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTG...AGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | ACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCATCGGGTGGCTGCAGCTaGTGTATGGCTTCCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TDINTQGCSEVHVGRTWSSGGCS*CMASWP Trigger: CGGCCAGGAAGCCATACAGCAGCTGCAGCCACCCGA...TGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTGGCTGAATGTGCTTCACCAGCTTGGTaGAGATGGCCCCCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCSEVHVGRTWSPQLAECASPAW*RWPPCP Trigger: AGGACAAGGGGGCCATCTGCACCAAGCTGGTGAAGC...ACATTCAGCCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR GCA 90 bp | CCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGCTTCACCAGCTTGGTaGAGATGGCCCCCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSKCSLWSVPGMGVSGAAASPAW*RWPPCP Trigger: AGGACAAGGGGGCCATCTGCACCAAGCTGGTGAAGC...TGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTCACCAGCTTGGTaGAGATGGCCCCCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLASPAW*RWPPCP Trigger: AGGACAAGGGGGCCATCTGCACCAAGCTGGTGAAGC...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTGCTTCACCAGCTTGGTaGAGATGGCCCCCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALASPAW*RWPPCP Trigger: AGGACAAGGGGGCCATCTGCACCAAGCTGGTGAAGC...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGGAGCACGGCCCCGCGTaGGCAGGAAGTTCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KILPNALYGVSQAWGSQGEHGPA*AGSSPG Trigger: ACCTGGTGAACTTCCTGCGCACGCGGGGCCGTGCTC...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTGAGTCCAGCCCCTTaGGCTCTGCCTTGGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KCSLWSVPGMGVSGAAELLSPAP*ALPWLS Trigger: GCTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAA...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTGGCTGAATGTGCTTCTCCACTATTTTaGGGAAGGGTGGTCGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GCSEVHVGRTWSPQLAECASPLF*GRVVGA Trigger: CGCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGC...ACATTCAGCCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR GCA 90 bp | CCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGCTTCTCCACTATTTTaGGGAAGGGTGGTCGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSKCSLWSVPGMGVSGAAASPLF*GRVVGA Trigger: CGCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGC...TGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTCTCCACTATTTTaGGGAAGGGTGGTCGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLASPLF*GRVVGA Trigger: CGCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGC...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCCTTGCCATGAAACCATaGCATGAGGCTGAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSLAMKP*HEAELG Trigger: CCCAAGCTCAGCCTCATGCCATGGTTTCATGGCAAG...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTGCTGCAGCTGCTGTATaGCTTCCTGGCCGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALAAAAV*LPGRRS Trigger: AGATCTCCGGCCAGGAAGCCATACAGCAGCTGCAGC...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | CAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTGCTGCAGCTGCTGTATaGCTTCCTGGCCGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QMLFMECPRHGGLRGCRAAAAAV*LPGRRS Trigger: AGATCTCCGGCCAGGAAGCCATACAGCAGCTGCAGC...AGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAGTCCAGCCCCTTGCGCTCTGCCTTGGCTAAGCCAAAGTCACTGACCTTGGCTGCAGCTGCTGTATaGCTTCCTGGCCGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LESSPLRSALAKPKSLTLAAAAV*LPGRRS Trigger: AGATCTCCGGCCAGGAAGCCATACAGCAGCTGCAGC...CAAGGTCAGTGACTTTGGCTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGCCAGCTTGGTGCAGATaGCCCCCTTGTCCTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQPAWCR*PPCPWC Trigger: ACACCAAGGACAAGGGGGCCATCTGCACCAAGCTGG...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCAGCTTGGTGCAGATaGCCCCCTTGTCCTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALPAWCR*PPCPWC Trigger: ACACCAAGGACAAGGGGGCCATCTGCACCAAGCTGG...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTCCAGCTTGGTGCAGATaGCCCCCTTGTCCTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSPAWCR*PPCPWC Trigger: ACACCAAGGACAAGGGGGCCATCTGCACCAAGCTGG...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | CCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCGCCCTGTTTCCTCCTTaGCTTCACCAGCTTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNALYGVSQAWGSQGLQSALFPP*LHQLGA Trigger: TGCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGC...GCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | TGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTCTGCGTAGCCAGCCAGCCTTaGCGAGCTCCTCCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRALPGSVTLHLCPLAFCVASQP*RAPPLQ Trigger: CTGCAGAGGAGGAGCTCGCCAAGGCTGGCTGGCTAC...GCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | AAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCGTAGCCAGCCAGCCTTaGCGAGCTCCTCCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSFQMLFMECPRHGGLRGVASQP*RAPPLQ Trigger: CTGCAGAGGAGGAGCTCGCCAAGGCTGGCTGGCTAC...GCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCACAATGTACAAGCCGTaGTGCAGGATCACACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSTMYKP*CRITPR Trigger: CCTGGGTGTGATCCTGCACCACGGCTTGTACATTGT...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | ATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGTATTTTGCGGAAGGGTaGTCGGCGCGCAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILPNALYGVSQAWGSQGLYFAEG*SARRLC Trigger: GCAGAGCCTGCGCGCCGACCACCCTTCCGCAAAATA...CAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS-3UTR TCA 90 bp | AATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTAGAACCGCCCGTTTTTaGGAGCCTCAGGTGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPSKCSLWSVPGMGVSGARTARF*EPQVPS Trigger: GGACGGCACCTGAGGCTCTCAAAAACGGGCGGTTCT...AGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS-3UTR GCA 90 bp | AGTTCTAGGAGGAATGTTGTAGGCCTAGGGCTCACTGGAGAGGCAACCATTTCCGCCCTTCCTGCCCACTaGCATGGTGCTTGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRRNVVGLGLTGEATISALPAH*HGAWLG Trigger: ACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGC...GGAAATGGTTGCCTCTCCAGTGAGCCCTAGGCCTACAACATTCCTCCTAGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
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| CDS-3UTR GCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGCCCCTCTCCAATCTGTaGTCCCAGAGTCAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQPLSNL*SQSQML Trigger: CAGCATCTGACTCTGGGAGCACAGATTGGAGAGGGG...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR GCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTCCCCTCTCCAATCTGTaGTCCCAGAGTCAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSPLSNL*SQSQML Trigger: CAGCATCTGACTCTGGGAGCACAGATTGGAGAGGGG...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | CAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCACTGCCATGGTGCTTaGCTCGGTACCAGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QMLFMECPRHGGLRGCRAHCHGA*LGTSSC Trigger: ACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTG...AGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTCACTGCCATGGTGCTTaGCTCGGTACCAGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSHCHGA*LGTSSC Trigger: ACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTG...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTTGGCTTCACCAGCTTaGTGCAGATGGCCCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSLASPA*CRWPPC Trigger: ACAAGGGGGCCATCTGCACCAAGCTGGTGAAGCCAA...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTGGCTTCACCAGCTTaGTGCAGATGGCCCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGCRALPGSVTLHLCPLALASPA*CRWPPC Trigger: ACAAGGGGGCCATCTGCACCAAGCTGGTGAAGCCAA...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTGCCCTGTTTCCTCCTTaGCTTCACCAGCTTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NALYGVSQAWGSQGLQSSALFPP*LHQLGA Trigger: TGCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGC...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTGGCTGAAACAATGTACAAGCCGTaGTGCAGGATCACACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGCSEVHVGRTWSPQLAETMYKP*CRITPR Trigger: CCTGGGTGTGATCCTGCACCACGGCTTGTACATTGT...TTCAGCCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCTGCTCACGTGCTCCATaGCAATGTACAAGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFQMLFMECPRHGGLRGCCSRAP*QCTSRG Trigger: ACCACGGCTTGTACATTGTCATGGAGCACGTGAGCA...GCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTTGCTCACGTGCTCCATaGCAATGTACAAGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLCSRAP*QCTSRG Trigger: ACCACGGCTTGTACATTGTCATGGAGCACGTGAGCA...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCTAAGCCAAAGTCACTaGCCTTGGCCACCAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALLSQSH*PWPPSP Trigger: AGGACTTGGTGGCCAAGGTCAGTGACTTTGGCTTAG...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTAAGCCAAAGTCACTaGCCTTGGCCACCAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QMLFMECPRHGGLRGCRALSQSH*PWPPSP Trigger: AGGACTTGGTGGCCAAGGTCAGTGACTTTGGCTTAG...AGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTCTAAGCCAAAGTCACTaGCCTTGGCCACCAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGCRALPGSVTLHLCPLALSQSH*PWPPSP Trigger: AGGACTTGGTGGCCAAGGTCAGTGACTTTGGCTTAG...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGAGAACCGCCCGTTTTTaGGAGCCTCAGGTGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KILPNALYGVSQAWGSQGRTARF*EPQVPS Trigger: GGACGGCACCTGAGGCTCTCAAAAACGGGCGGTTCT...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCTTGCCCTTGCTCACGTaGTCCATGACAATGTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSLPLLT*SMTMYK Trigger: CTTGTACATTGTCATGGAGCACGTGAGCAAGGGCAA...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | ACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCATTGAGTCCAGCCCCTTaGGCTCTGCCTTGGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDINTQGCSEVHVGRTWSLSPAP*ALPWLS Trigger: GCTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAA...TGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR GCA 90 bp | AAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTTGAGTCCAGCCCCTTaGGCTCTGCCTTGGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSFQMLFMECPRHGGLRGLSPAP*ALPWLS Trigger: GCTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAA...GCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | CAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACTGCCATGGTGCTTaGCTCGGTACCAGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSTLRAAQRFMWAGHGHHCHGA*LGTSSC Trigger: ACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTG...GTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | CACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCCACTGCCATGGTGCTTaGCTCGGTACCAGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRHQHSGLLRGSCGQDMVHCHGA*LGTSSC Trigger: ACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTG...GACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGCTTGCCATGAAACCATaGCATGAGGCTGAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQLAMKP*HEAELG Trigger: CCCAAGCTCAGCCTCATGCCATGGTTTCATGGCAAG...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTCTTGCCATGAAACCATaGCATGAGGCTGAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGCRALPGSVTLHLCPLALAMKP*HEAELG Trigger: CCCAAGCTCAGCCTCATGCCATGGTTTCATGGCAAG...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCCTTGCCATGAAACCATaGCATGAGGCTGAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KCSLWSVPGMGVSGAAELLAMKP*HEAELG Trigger: CCCAAGCTCAGCCTCATGCCATGGTTTCATGGCAAG...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | GGTGATATCACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGCCAGCTTGGTGCAGATaGCCCCCTTGTCCTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GDITDINTQGCSEVHVGRPAWCR*PPCPWC Trigger: ACACCAAGGACAAGGGGGCCATCTGCACCAAGCTGG...CCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR CCA 90 bp | CAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACGCCCTGTTTCCTCCTTaGCTTCACCAGCTTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSTLRAAQRFMWAGHGHALFPP*LHQLGA Trigger: TGCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGC...GTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR CCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTACAATGTACAAGCCGTaGTGCAGGATCACACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALTMYKP*CRITPR Trigger: CCTGGGTGTGATCCTGCACCACGGCTTGTACATTGT...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGACAATGTACAAGCCGTaGTGCAGGATCACACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQTMYKP*CRITPR Trigger: CCTGGGTGTGATCCTGCACCACGGCTTGTACATTGT...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGTATTTTGCGGAAGGGTaGTCGGCGCGCAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KILPNALYGVSQAWGSQGYFAEG*SARRLC Trigger: GCAGAGCCTGCGCGCCGACCACCCTTCCGCAAAATA...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| 3UTR CAA 72 bp | AGCAACATGACTAGAGACAGACAAGGCCGGCTCACCTaGGAGTCAGGCCTCAGTTTCCCCTTCCACTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNMTRDRQGRLT*ESGLSFPFHFG Trigger: CCCAAAGTGGAAGGGGAAACTGAGGCCTGACTCCAAGGTGAGCCGGCCTTGTCTGTCTCTAGTCATGTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128576.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGTGCTCACGTGCTCCATaGCAATGTACAAGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILPNALYGVSQAWGSQGLCSRAP*QCTSRG Trigger: ACCACGGCTTGTACATTGTCATGGAGCACGTGAGCA...CAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGGCTTCACCAGCTTGGTaGAGATGGCCCCCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KILPNALYGVSQAWGSQGASPAW*RWPPCP Trigger: AGGACAAGGGGGCCATCTGCACCAAGCTGGTGAAGC...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | CCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTTGCCCTTGCTCACGTaGTCCATGACAATGTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PNALYGVSQAWGSQGLQSLPLLT*SMTMYK Trigger: CTTGTACATTGTCATGGAGCACGTGAGCAAGGGCAA...GCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCTCTCCAGGTATTCCATaGCTTCAGCAACATGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSSPGIP*LQQHEE Trigger: CTCTTCATGTTGCTGAAGGCATGGAATACCTGGAGA...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTCTGCCACTGCCATGGTGCTTaGCTCGGTACCAGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CRALPGSVTLHLCPLAFCHCHGA*LGTSSC Trigger: ACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTG...GCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | AAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCCACTGCCATGGTGCTTaGCTCGGTACCAGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSFQMLFMECPRHGGLRGHCHGA*LGTSSC Trigger: ACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTG...GCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | AAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTTGGCTTCACCAGCTTaGTGCAGATGGCCCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSFQMLFMECPRHGGLRGLASPA*CRWPPC Trigger: ACAAGGGGGCCATCTGCACCAAGCTGGTGAAGCCAA...GCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTCTGCGCCCTGTTTCCTCCTTaGCTTCACCAGCTTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CRALPGSVTLHLCPLAFCALFPP*LHQLGA Trigger: TGCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGC...GCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCGACATCTTGGGGTATaGGGCTCTTCCATAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLWSVPGMGVSGAAELFRHLGV*GSSIRE Trigger: TTCTCTTATGGAAGAGCCCCATACCCCAAGATGTCG...GAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCTCACGTGCTCCATaGCAATGTACAAGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSFQMLFMECPRHGGLRGCSRAP*QCTSRG Trigger: ACCACGGCTTGTACATTGTCATGGAGCACGTGAGCA...GCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCATGCCTTCAGCAACATaGAGAGCAAACTGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KCSLWSVPGMGVSGAAELMPSAT*RANCRS Trigger: GCTTCTGCAGTTTGCTCTTCATGTTGCTGAAGGCAT...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTATGCCTTCAGCAACATaGAGAGCAAACTGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGCRALPGSVTLHLCPLAMPSAT*RANCRS Trigger: GCTTCTGCAGTTTGCTCTTCATGTTGCTGAAGGCAT...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTATGCCTTCAGCAACATaGAGAGCAAACTGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLMPSAT*RANCRS Trigger: GCTTCTGCAGTTTGCTCTTCATGTTGCTGAAGGCAT...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGATGCCTTCAGCAACATaGAGAGCAAACTGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQMPSAT*RANCRS Trigger: GCTTCTGCAGTTTGCTCTTCATGTTGCTGAAGGCAT...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGTTGCCCTTGCTCACGTaGTCCATGACAATGTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQLPLLT*SMTMYK Trigger: CTTGTACATTGTCATGGAGCACGTGAGCAAGGGCAA...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | CAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTGAGAGTTCTCACACTTaGTCATGCATTGAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QMLFMECPRHGGLRGCRAESSHT*SCIESQ Trigger: CTGGGACTCAATGCATGACCAAGTGTGAGAACTCTC...AGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGGAGAGTTCTCACACTTaGTCATGCATTGAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQESSHT*SCIESQ Trigger: CTGGGACTCAATGCATGACCAAGTGTGAGAACTCTC...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGAGAGTTCTCACACTTaGTCATGCATTGAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRGCRALPGSVTLHLCPLESSHT*SCIESQ Trigger: CTGGGACTCAATGCATGACCAAGTGTGAGAACTCTC...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | AAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCCTTGCCATGAAACCATaGCATGAGGCTGAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFQMLFMECPRHGGLRGLAMKP*HEAELG Trigger: CCCAAGCTCAGCCTCATGCCATGGTTTCATGGCAAG...GCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTCTGCCTTGCCATGAAACCATaGCATGAGGCTGAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRALPGSVTLHLCPLAFCLAMKP*HEAELG Trigger: CCCAAGCTCAGCCTCATGCCATGGTTTCATGGCAAG...GCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGTTGGCTTCACCAGCTTaGTGCAGATGGCCCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KILPNALYGVSQAWGSQGLASPA*CRWPPC Trigger: ACAAGGGGGCCATCTGCACCAAGCTGGTGAAGCCAA...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGCGACATCTTGGGGTATaGGGCTCTTCCATAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPNALYGVSQAWGSQGLQRHLGV*GSSIRE Trigger: TTCTCTTATGGAAGAGCCCCATACCCCAAGATGTCG...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCGACATCTTGGGGTATaGGGCTCTTCCATAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MLFMECPRHGGLRGCRALRHLGV*GSSIRE Trigger: TTCTCTTATGGAAGAGCCCCATACCCCAAGATGTCG...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTAAGCCAAAGTCACTaGCCTTGGCCACCAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KILPNALYGVSQAWGSQGLSQSH*PWPPSP Trigger: AGGACTTGGTGGCCAAGGTCAGTGACTTTGGCTTAG...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGGAGAGTTCTCACACTTaGTCATGCATTGAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPNALYGVSQAWGSQGLESSHT*SCIESQ Trigger: CTGGGACTCAATGCATGACCAAGTGTGAGAACTCTC...CAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CCA 90 bp | ATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCGACATCTTGGGGTATaGGGCTCTTCCATAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILPNALYGVSQAWGSQGLRHLGV*GSSIRE Trigger: TTCTCTTATGGAAGAGCCCCATACCCCAAGATGTCG...CAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS-3UTR TCA 90 bp | TCACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTATGCCTTCAGCAACATaGAGAGCAAACTGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQTSTLRAAQRFMWAGHGMPSAT*RANCRS Trigger: GCTTCTGCAGTTTGCTCTTCATGTTGCTGAAGGCAT...ACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
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| CDS-3UTR GCA 90 bp | GGTGATATCACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGTTGCCCTTGCTCACGTaGTCCATGACAATGTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDITDINTQGCSEVHVGRLPLLT*SMTMYK Trigger: CTTGTACATTGTCATGGAGCACGTGAGCAAGGGCAA...CCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
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| CDS-3UTR GCA 90 bp | ATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGTCTCCAGGTATTCCATaGCTTCAGCAACATGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPNALYGVSQAWGSQGLSPGIP*LQQHEE Trigger: CTCTTCATGTTGCTGAAGGCATGGAATACCTGGAGA...CAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | TGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTCTGCCGACATCTTGGGGTATaGGGCTCTTCCATAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: CRALPGSVTLHLCPLAFCRHLGV*GSSIRE Trigger: TTCTCTTATGGAAGAGCCCCATACCCCAAGATGTCG...GCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| 3UTR CAA 72 bp | TGTAGTCTGCCCATGCAGAGAAAGTGGGTAGGGACTTaGGGTGATATCACAGACATCAACACTCAGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CSLPMQRKWVGT*GDITDINTQGC Trigger: GCAGCCCTGAGTGTTGATGTCTGTGATATCACCCAAAGTCCCTACCCACTTTCTCTGCATGGGCAGACTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| CDS-3UTR GCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGTTGCCCTTGCTCACGTaGTCCATGACAATGTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KILPNALYGVSQAWGSQGLPLLT*SMTMYK Trigger: CTTGTACATTGTCATGGAGCACGTGAGCAAGGGCAA...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS-3UTR CCA 90 bp | TTGGGTGATATCACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCGAGAGTTCTCACACTTaGTCATGCATTGAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGDITDINTQGCSEVHVGESSHT*SCIESQ Trigger: CTGGGACTCAATGCATGACCAAGTGTGAGAACTCTC...GCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTGATATCACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| CDS-3UTR GCA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGTCTCCAGGTATTCCATaGCTTCAGCAACATGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KILPNALYGVSQAWGSQGSPGIP*LQQHEE Trigger: CTCTTCATGTTGCTGAAGGCATGGAATACCTGGAGA...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS GCA 90 bp | CCAGGGGCCCAGCGCGTTGGCATCCTAGCTGCAGCAGGCGCGGGGTaGCAAGCTCCGAACAATCTAGGGCTCACCCGAGGCAGGTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: PGAQRVGILAAAGAG*QAPNNLGLTRGRSL Trigger: TAGGGACCTGCCTCGGGTGAGCCCTAGATTGTTCGGAGCTTGGCACCCCGCGCCTGCTGCAGCTAGGATGCCAACGCGCTGGGCCCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117488.8 |
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| CDS GCA 90 bp | CGCAGAGCAGCGGCCGCCAGCAGCCCTTCCTGCCCACTGCCATGGTaGTTGGCTCGGTACCAGCTCTTGTCCTCACAGGCCTCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RRAAAASSPSCPLPW*LARYQLLSSQASKM Trigger: CATCTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGCTGCTGGCGGCCGCTGCTCTGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 ENSMUST00000130282.8 |
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| CDS CCA 90 bp | TGTCGCAGAGCAGCGGCCGCCAGCAGCCCTTCCTGCCCACTGCCATaGTGCTTGGCTCGGTACCAGCTCTTGTCCTCACAGGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CRRAAAASSPSCPLP*CLARYQLLSSQASK Trigger: CTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGCTGCTGGCGGCCGCTGCTCTGCGACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 ENSMUST00000130282.8 |
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| CDS GCA 90 bp | GGTCATGCATTGAGTCCCAGGGGCCCAGCGCGTTGGCATCCTAGCTaGAGCAGGCGCGGGGTGCCAAGCTCCGAACAATCTAGGGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: GHALSPRGPARWHPS*SRRGVPSSEQSRAH Trigger: GTGAGCCCTAGATTGTTCGGAGCTTGGCACCCCGCGCCTGCTGCAGCTAGGATGCCAACGCGCTGGGCCCCTGGGACTCAATGCATGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117488.8 |
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| CDS CCA 90 bp | GAGCAGCGGCCGCCAGCAGCCCTTCCTGCCCACTGCCATGGTGCTTaGCTCGGTACCAGCTCTTGTCCTCACAGGCCTCCAAGATGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQRPPAALPAHCHGA*LGTSSCPHRPPRWS Trigger: TGACCATCTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGCTGCTGGCGGCCGCTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 ENSMUST00000130282.8 |
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| CDS-3UTR CAA 90 bp | CTCAGGATCCCTCCCCAGCGGGTGACACAGCTGTGTGGCAGGTGGCAGGGCCCTAGGAAGTTCACCAGGTaGCCCTTGCTCACGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LRIPPQRVTQLCGRWQGPRKFTR*PLLTCS Trigger: GGAGCACGTGAGCAAGGGCAACCTGGTGAACTTCCT...AGGGCCCTGCCACCTGCCACACAGCTGTGTCACCCGCTGGGGAGGGATCCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
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| CDS TCA 90 bp | AGCTCACCGGGCTTGGGGCGAGAGTTCTCACACTTGGTCATGCATTaGGTCCCAGGGGCCCAGCGCGTTGGCATCCTAGCTGCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPGLGREFSHLVMH*VPGAQRVGILAAAG Trigger: GCCTGCTGCAGCTAGGATGCCAACGCGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGTGAGAACTCTCGCCCCAAGCCCGGTGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117488.8 |
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| CDS-3UTR CAA 90 bp | AGGGCCCTGGGACCGATGGCAAGTAGATCTCTAGCCTGGCTGTTCCCCAGGTGCACACTTGGTCATGCATaGAGTCCCAGGGGCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RALGPMASRSLAWLFPRCTLGHA*SPRGPA Trigger: CGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGT...GCACCTGGGGAACAGCCAGGCTAGAGATCTACTTGCCATCGGTCCCAGGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTGGCAGGGCCCTGGGACCGATGGCAAGTAGATCTCTAGCCTGGCTGTTCCGCCCTGTTTCCTCCTaGGCTTCACCAGCTTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: AGGRALGPMASRSLAWLFRPVSS*ASPAWC Trigger: GCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGCG...GAACAGCCAGGCTAGAGATCTACTTGCCATCGGTCCCAGGGCCCTGCCACCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
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| CDS GCA 90 bp | GCTCCAAACTCCCCCTCTCCAATCTGTGCTCCCAGAGTCAGATGCTaGAGGTCGAGTAGCCAGCCAGCCTTGGCGAGCTCCTCCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: APNSPSPICAPRVRC*RSSSQPALASSSSA Trigger: TGCAGAGGAGGAGCTCGCCAAGGCTGGCTGGCTACTCGACCTGCAGCATCTGACTCTGGGAGCACAGATTGGAGAGGGGGAGTTTGGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS CCA 90 bp | CAGCTGCTGTATGGCTTCCTGGCCGGAGATCTTGCCATGAAACCATaGCATGAGGCTGAGCTTGGGGTCTGTGGAGAGGGCCTCCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: QLLYGFLAGDLAMKP*HEAELGVCGEGLPL Trigger: CAGCGGGAGGCCCTCTCCACAGACCCCAAGCTCAGCCTCATGCCATGGTTTCATGGCAAGATCTCCGGCCAGGAAGCCATACAGCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 ENSMUST00000130282.8 |
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| CDS CCA 90 bp | GTGCTCCCAGAGTCAGATGCTGCAGGTCGAGTAGCCAGCCAGCCTTaGCGAGCTCCTCCTCTGCAGACTTTGCGCCCTGTTTCCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VLPESDAAGRVASQP*RAPPLQTLRPVSSL Trigger: CAAGGAGGAAACAGGGCGCAAAGTCTGCAGAGGAGGAGCTCGCCAAGGCTGGCTGGCTACTCGACCTGCAGCATCTGACTCTGGGAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCCTTGAGTCCAGCCCCTaGCGCTCTGCCTTGGCTAAG | + |
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Preference number: 5 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSLESSP*RSALAK Trigger: CTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAAG...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACAGCTGGCTGAATCAGGTGCCGTCCACTaGACTGGCAGCCGGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: QGCSEVHVGRTWSPQLAESGAVH*TGSRLE Trigger: CTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTGA...TTCAGCCAGCTGTGGTGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
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| CDS-3UTR CAA 90 bp | TGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCTCAGGTGCCGTCCACTaGACTGGCAGCCGGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: CSLWSVPGMGVSGAAELFSGAVH*TGSRLE Trigger: CTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTGA...GAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | TGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCACACTTGGTCATGCATaGAGTCCCAGGGGCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CSLWSVPGMGVSGAAELFTLGHA*SPRGPA Trigger: CGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGT...GAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | TGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCTTGAGTCCAGCCCCTaGCGCTCTGCCTTGGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLWSVPGMGVSGAAELFLESSP*RSALAK Trigger: CTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAAG...GAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGTCAGGTGCCGTCCACTaGACTGGCAGCCGGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPNALYGVSQAWGSQGLQSGAVH*TGSRLE Trigger: CTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTGA...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTCAGGTGCCGTCCACTaGACTGGCAGCCGGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGCRALPGSVTLHLCPLASGAVH*TGSRLE Trigger: CTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTGA...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | CAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTTCAGGTGCCGTCCACTaGACTGGCAGCCGGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QMLFMECPRHGGLRGCRASGAVH*TGSRLE Trigger: CTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTGA...AGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS TCA 90 bp | ACGGCCGAAACTGACACACAAGACATAGTCTCCAGGGTGACGAGCTaGTTCCCTCACAAGGAACAGCCCGTCCTCGGGTGGCTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TAETDTQDIVSRVTS*FPHKEQPVLGWLQL Trigger: CAGCTGCAGCCACCCGAGGACGGGCTGTTCCTTGTGAGGGAATCAGCTCGTCACCCTGGAGACTATGTCTTGTGTGTCAGTTTCGGCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS CCA 90 bp | GGTGCTTGGCTCGGTACCAGCTCTTGTCCTCACAGGCCTCCAAGATaGTCACCATGTCACCCTTTCGAAAGGCTAGCTCACCGGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAWLGTSSCPHRPPR*SPCHPFERLAHRAW Trigger: CCAAGCCCGGTGAGCTAGCCTTTCGAAAGGGTGACATGGTGACCATCTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGCCAAGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 ENSMUST00000130282.8 |
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| CDS CCA 90 bp | CTTGGCGAGCTCCTCCTCTGCAGACTTTGCGCCCTGTTTCCTCCTTaGCTTCACCAGCTTGGTGCAGATGGCCCCCTTGTCCTTGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LGELLLCRLCALFPP*LHQLGADGPLVLGV Trigger: TACACCAAGGACAAGGGGGCCATCTGCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGCGCAAAGTCTGCAGAGGAGGAGCTCGCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTACACTTGGTCATGCATaGAGTCCCAGGGGCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RGCRALPGSVTLHLCPLATLGHA*SPRGPA Trigger: CGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGT...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGACACTTGGTCATGCATaGAGTCCCAGGGGCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPNALYGVSQAWGSQGLQTLGHA*SPRGPA Trigger: CGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGT...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCGCTCGGTACCAGCTCTaGTCCTCACAGGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KCSLWSVPGMGVSGAAELARYQL*SSQASK Trigger: CTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGC...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | CCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGCTCGGTACCAGCTCTaGTCCTCACAGGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSKCSLWSVPGMGVSGAAARYQL*SSQASK Trigger: CTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGC...TGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTCCACTGCCATGGTGCTaGGCTCGGTACCAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGCRALPGSVTLHLCPLAPLPWC*ARYQLL Trigger: CAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGG...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCCCACTGCCATGGTGCTaGGCTCGGTACCAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KCSLWSVPGMGVSGAAELPLPWC*ARYQLL Trigger: CAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGG...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCCGCCCTGTTTCCTCCTaGGCTTCACCAGCTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KCSLWSVPGMGVSGAAELRPVSS*ASPAWC Trigger: GCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGCG...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGCGCCCTGTTTCCTCCTaGGCTTCACCAGCTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPNALYGVSQAWGSQGLQRPVSS*ASPAWC Trigger: GCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGCG...CTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCACGCCCTGTTTCCTCCTaGGCTTCACCAGCTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSKCSLWSVPGMGVSGAARPVSS*ASPAWC Trigger: GCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGCG...TGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTCCCGGTGCACCAGCTTCTaGCTCTCCAGGTATTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ALYGVSQAWGSQGLQSSSRCTSF*LSRYSM Trigger: CATGGAATACCTGGAGAGCAAGAAGCTGGTGCACCG...GGAAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | TCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCCTTGAGTCCAGCCCCTaGCGCTCTGCCTTGGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFQMLFMECPRHGGLRGCLESSP*RSALAK Trigger: CTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAAG...GCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS GCA 90 bp | AGGTTGCCCTTGCTCACGTGCTCCATGACAATGTACAAGCCGTGGTaGAGGATCACACCCAGGAGTCGCACTAGGTTCCTGTGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLPLLTCSMTMYKPW*RITPRSRTRFLCCS Trigger: GCTGCAGCACAGGAACCTAGTGCGACTCCTGGGTGTGATCCTGCACCACGGCTTGTACATTGTCATGGAGCACGTGAGCAAGGGCAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS CCA 90 bp | ACCAGGTTGCCCTTGCTCACGTGCTCCATGACAATGTACAAGCCGTaGTGCAGGATCACACCCAGGAGTCGCACTAGGTTCCTGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TRLPLLTCSMTMYKP*CRITPRSRTRFLCC Trigger: GCAGCACAGGAACCTAGTGCGACTCCTGGGTGTGATCCTGCACCACGGCTTGTACATTGTCATGGAGCACGTGAGCAAGGGCAACCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | CACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCCCACTGCCATGGTGCTaGGCTCGGTACCAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HRHQHSGLLRGSCGQDMVPLPWC*ARYQLL Trigger: CAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGG...GACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
||
| CDS-3UTR CAA 90 bp | CCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTTCACCAGGTTGCCCTaGCTCACGTGCTCCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: PNALYGVSQAWGSQGLQSFTRLP*LTCSMT Trigger: TGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAA...GCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTAGGAAGTTCACCAGGTaGCCCTTGCTCACGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MLFMECPRHGGLRGCRALRKFTR*PLLTCS Trigger: GGAGCACGTGAGCAAGGGCAACCTGGTGAACTTCCT...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | CACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCCTTGAGTCCAGCCCCTaGCGCTCTGCCTTGGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: HRHQHSGLLRGSCGQDMVLESSP*RSALAK Trigger: CTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAAG...GACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR CAA 90 bp | AGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTCTCCAGACATCCGACTaGCTGGAGAACCGCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RGCRALPGSVTLHLCPLALQTSD*LENRPF Trigger: AAACGGGCGGTTCTCCAGCAAGTCGGATGTCTGGAG...AGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCCTCCAGACATCCGACTaGCTGGAGAACCGCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KCSLWSVPGMGVSGAAELLQTSD*LENRPF Trigger: AAACGGGCGGTTCTCCAGCAAGTCGGATGTCTGGAG...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTCTCCAGACATCCGACTaGCTGGAGAACCGCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NALYGVSQAWGSQGLQSSLQTSD*LENRPF Trigger: AAACGGGCGGTTCTCCAGCAAGTCGGATGTCTGGAG...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTAGCTTCTCCACTATTTaGCGGAAGGGTGGTCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QMLFMECPRHGGLRGCRASFSTI*RKGGRR Trigger: GCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGCT...AGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | CTCAGGGGCTGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTAGCTTCTCCACTATTTaGCGGAAGGGTGGTCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRGCRALPGSVTLHLCPLSFSTI*RKGGRR Trigger: GCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGCT...AAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCAGCCCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAAGCTTCTCCACTATTTaGCGGAAGGGTGGTCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSKCSLWSVPGMGVSGAASFSTI*RKGGRR Trigger: GCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGCT...TGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTACACTTGGTCATGCATaGAGTCCCAGGGGCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: NPSKCSLWSVPGMGVSGATLGHA*SPRGPA Trigger: CGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGT...AGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | TGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTCTGCGCTCGGTACCAGCTCTaGTCCTCACAGGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CRALPGSVTLHLCPLAFCARYQL*SSQASK Trigger: CTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGC...GCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | TGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTCTGCCCACTGCCATGGTGCTaGGCTCGGTACCAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CRALPGSVTLHLCPLAFCPLPWC*ARYQLL Trigger: CAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGG...GCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | ACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCACCACTGCCATGGTGCTaGGCTCGGTACCAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TDINTQGCSEVHVGRTWSPLPWC*ARYQLL Trigger: CAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGG...TGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
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| CDS-3UTR CAA 90 bp | AATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTCGCCCTGTTTCCTCCTaGGCTTCACCAGCTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NPSKCSLWSVPGMGVSGARPVSS*ASPAWC Trigger: GCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGCG...AGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | ATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTTTTCACCAGGTTGCCCTaGCTCACGTGCTCCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: MLFMECPRHGGLRGCRALFTRLP*LTCSMT Trigger: TGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAA...AAGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | AAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCCGGTGCACCAGCTTCTaGCTCTCCAGGTATTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: KCSLWSVPGMGVSGAAELRCTSF*LSRYSM Trigger: CATGGAATACCTGGAGAGCAAGAAGCTGGTGCACCG...GAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | AATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGCAGAGCTCTCGGTGCACCAGCTTCTaGCTCTCCAGGTATTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: NALYGVSQAWGSQGLQSSRCTSF*LSRYSM Trigger: CATGGAATACCTGGAGAGCAAGAAGCTGGTGCACCG...AGAGCTCTGCAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | TGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTCTGCCTTGAGTCCAGCCCCTaGCGCTCTGCCTTGGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: CRALPGSVTLHLCPLAFCLESSP*RSALAK Trigger: CTTAGCCAAGGCAGAGCGCAAGGGGCTGGACTCAAG...GCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGGCTCGGTACCAGCTCTaGTCCTCACAGGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KILPNALYGVSQAWGSQGARYQL*SSQASK Trigger: CTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGC...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 ENSMUST00000128576.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTGTTCACCAGGTTGCCCTaGCTCACGTGCTCCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: ILPNALYGVSQAWGSQGLFTRLP*LTCSMT Trigger: TGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAA...CAGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
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| CDS-3UTR CAA 90 bp | AATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTAGGAAGTTCACCAGGTaGCCCTTGCTCACGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NPSKCSLWSVPGMGVSGARKFTR*PLLTCS Trigger: GGAGCACGTGAGCAAGGGCAACCTGGTGAACTTCCT...AGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | AAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCCTCCAGACATCCGACTaGCTGGAGAACCGCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSFQMLFMECPRHGGLRGLQTSD*LENRPF Trigger: AAACGGGCGGTTCTCCAGCAAGTCGGATGTCTGGAG...GCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCTAGCTTCTCCACTATTTaGCGGAAGGGTGGTCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NPSKCSLWSVPGMGVSGASFSTI*RKGGRR Trigger: GCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGCT...AGCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | AAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCAGCTTCTCCACTATTTaGCGGAAGGGTGGTCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KSFQMLFMECPRHGGLRGSFSTI*RKGGRR Trigger: GCGCCGACCACCCTTCCGCAAAATAGTGGAGAAGCT...GCCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACATCAACACTCAGGGCTGCTCAGAGGTTCATGTGGGCAGGACATGGTCATTCACCAGGTTGCCCTaGCTCACGTGCTCCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: TDINTQGCSEVHVGRTWSFTRLP*LTCSMT Trigger: TGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAA...TGACCATGTCCTGCCCACATGAACCTCTGAGCAGCCCTGAGTGTTGATGTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS-3UTR CAA 90 bp | TGCAGAGCTCTTCCTGGCTCTGTGACCCTGCATCTATGTCCTCTTGCTTTCTGCCGGTGCACCAGCTTCTaGCTCTCCAGGTATTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CRALPGSVTLHLCPLAFCRCTSF*LSRYSM Trigger: CATGGAATACCTGGAGAGCAAGAAGCTGGTGCACCG...GCAGAAAGCAAGAGGACATAGATGCAGGGTCACAGAGCCAGGAAGAGCTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGTTCACCAGGTTGCCCTaGCTCACGTGCTCCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: KILPNALYGVSQAWGSQGFTRLP*LTCSMT Trigger: TGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAA...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCCTTCCAAATGCTCTTTATGGAGTGTCCCAGGCATGGGGGTCTCAGGGGCGGTGCACCAGCTTCTaGCTCTCCAGGTATTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: KILPNALYGVSQAWGSQGRCTSF*LSRYSM Trigger: CATGGAATACCTGGAGAGCAAGAAGCTGGTGCACCG...CCCCTGAGACCCCCATGCCTGGGACACTCCATAAAGAGCATTTGGAAGGATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000121205.8 |
||
| CDS-3UTR CAA 90 bp | ACACACAGGCATCAGACAGTTGTACAAAATCCTTCCAAATGCTCTTTATGGAGTGCTCGGTACCAGCTCTaGTCCTCACAGGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: THRHQTVVQNPSKCSLWSARYQL*SSQASK Trigger: CTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGC...ACTCCATAAAGAGCATTTGGAAGGATTTTGTACAACTGTCTGATGCCTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105328.10 ENSMUST00000128576.8 |
||
| CDS-3UTR CAA 90 bp | ACACACAGGCATCAGACAGTTGTACAAAATCCTTCCAAATGCTCTTTATGGAGTCTCCAGACATCCGACTaGCTGGAGAACCGCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: THRHQTVVQNPSKCSLWSLQTSD*LENRPF Trigger: AAACGGGCGGTTCTCCAGCAAGTCGGATGTCTGGAG...ACTCCATAAAGAGCATTTGGAAGGATTTTGTACAACTGTCTGATGCCTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105328.10 |
||
| CDS GCA 72 bp | GCGGCCGCCAGCAGCCCTTCCTGCCCACTGCCATGGTaGTTGGCTCGGTACCAGCTCTTGTCCTCACAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAASSPSCPLPW*LARYQLLSSQA Trigger: GGCCTGTGAGGACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGCTGCTGGCGGCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 ENSMUST00000130282.8 |
||
| CDS GCA 72 bp | CAGCGCGTTGGCATCCTAGCTGCAGCAGGCGCGGGGTaGCAAGCTCCGAACAATCTAGGGCTCACCCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: QRVGILAAAGAG*QAPNNLGLTRG Trigger: GCCTCGGGTGAGCCCTAGATTGTTCGGAGCTTGGCACCCCGCGCCTGCTGCAGCTAGGATGCCAACGCGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117488.8 |
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| CDS GCA 72 bp | TTGAGTCCCAGGGGCCCAGCGCGTTGGCATCCTAGCTaGAGCAGGCGCGGGGTGCCAAGCTCCGAACAATCT | + |
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Preference number: 6 (lower is better) Translates to: LSPRGPARWHPS*SRRGVPSSEQS Trigger: AGATTGTTCGGAGCTTGGCACCCCGCGCCTGCTGCAGCTAGGATGCCAACGCGCTGGGCCCCTGGGACTCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117488.8 |
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| CDS CAA 90 bp | AGAGCAGCGGCCGCCAGCAGCCCTTCCTGCCCACTGCCATGGTGCTaGGCTCGGTACCAGCTCTTGTCCTCACAGGCCTCCAAGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: RAAAASSPSCPLPWC*ARYQLLSSQASKMV Trigger: GACCATCTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGCTGCTGGCGGCCGCTGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 ENSMUST00000130282.8 |
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| CDS GCA 72 bp | CACCGGGCTTGGGGCGAGAGTTCTCACACTTGGTCATaGATTGAGTCCCAGGGGCCCAGCGCGTTGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: HRAWGESSHTWS*IESQGPSALAS Trigger: GGATGCCAACGCGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGTGAGAACTCTCGCCCCAAGCCCGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117488.8 |
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| CDS GCA 72 bp | CACCGGGCTTGGGGCGAGAGTTCTCACACTTGGTCATaGATTGAGTCCCAGGGGCCCAGCGCTGCGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: HRAWGESSHTWS*IESQGPSAALA Trigger: TGCCAACGCAGCGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGTGAGAACTCTCGCCCCAAGCCCGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS CCA 72 bp | CTAGCTCACCGGGCTTGGGGCGAGAGTTCTCACACTTaGTCATGCATTGAGTCCCAGGGGCCCAGCGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LAHRAWGESSHT*SCIESQGPSAA Trigger: CGCAGCGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGTGAGAACTCTCGCCCCAAGCCCGGTGAGCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS CAA 72 bp | AACCGCCCGTTTTTGAGAGCCTCAGGTGCCGTCCACTaGACTGGCAGCCGGCTTGAGTCCAGCCCCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: NRPFLRASGAVH*TGSRLESSPLR Trigger: GCGCAAGGGGCTGGACTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTGAGGCTCTCAAAAACGGGCGGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS CAA 90 bp | TTGCTGGAGAACCGCCCGTTTTTGAGAGCCTCAGGTGCCGTCCACTaGACTGGCAGCCGGCTTGAGTCCAGCCCCTTGCGCTCTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LLENRPFLRASGAVH*TGSRLESSPLRSAL Trigger: CAAGGCAGAGCGCAAGGGGCTGGACTCAAGCCGGCTGCCAGTCAAGTGGACGGCACCTGAGGCTCTCAAAAACGGGCGGTTCTCCAGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS GCA 72 bp | TCCCCCTCTCCAATCTGTGCTCCCAGAGTCAGATGCTaGAGGTCGAGTAGCCAGCCAGCCTTGGCGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPSPICAPRVRC*RSSSQPALASS Trigger: GGAGCTCGCCAAGGCTGGCTGGCTACTCGACCTGCAGCATCTGACTCTGGGAGCACAGATTGGAGAGGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS CCA 72 bp | CTAGCTCACCGGGCTTGGGGCGAGAGTTCTCACACTTaGTCATGCATTGAGTCCCAGGGGCCCAGCGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: LAHRAWGESSHT*SCIESQGPSAL Trigger: CAACGCGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGTGAGAACTCTCGCCCCAAGCCCGGTGAGCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000130282.8 |
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| CDS CAA 72 bp | GGGCTTGGGGCGAGAGTTCTCACACTTGGTCATGCATaGAGTCCCAGGGGCCCAGCGCGTTGGCATCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: GLGARVLTLGHA*SPRGPARWHPS Trigger: GCTAGGATGCCAACGCGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGTGAGAACTCTCGCCCCAAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117488.8 |
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| CDS TCA 72 bp | GGCTTGGGGCGAGAGTTCTCACACTTGGTCATGCATTaGGTCCCAGGGGCCCAGCGCGTTGGCATCCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: GLGREFSHLVMH*VPGAQRVGILA Trigger: AGCTAGGATGCCAACGCGCTGGGCCCCTGGGACTCAATGCATGACCAAGTGTGAGAACTCTCGCCCCAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117488.8 |
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| CDS GCA 72 bp | AACTCCCCCTCTCCAATCTGTGCTCCCAGAGTCAGATaGTGCAGGTCGAGTAGCCAGCCAGCCTTGGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: NSPSPICAPRVR*CRSSSQPALAS Trigger: GCTCGCCAAGGCTGGCTGGCTACTCGACCTGCAGCATCTGACTCTGGGAGCACAGATTGGAGAGGGGGAGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS CCA 72 bp | GGAACAGCCCGTCCTCGGGTGGCTGCAGCTGCTGTATaGCTTCCTGGCCGGAGATCTTGCCATGAAACCATG | + |
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Preference number: 6 (lower is better) Translates to: GTARPRVAAAAV*LPGRRSCHETM Trigger: CATGGTTTCATGGCAAGATCTCCGGCCAGGAAGCCATACAGCAGCTGCAGCCACCCGAGGACGGGCTGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS CAA 72 bp | AGAGTCAGATGCTGCAGGTCGAGTAGCCAGCCAGCCTaGGCGAGCTCCTCCTCTGCAGACTTTGCGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RVRCCRSSSQPA*ASSSSADFAPC Trigger: ACAGGGCGCAAAGTCTGCAGAGGAGGAGCTCGCCAAGGCTGGCTGGCTACTCGACCTGCAGCATCTGACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS CAA 90 bp | TGTGCTCCCAGAGTCAGATGCTGCAGGTCGAGTAGCCAGCCAGCCTaGGCGAGCTCCTCCTCTGCAGACTTTGCGCCCTGTTTCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: CAPRVRCCRSSSQPA*ASSSSADFAPCFLL Trigger: AAGGAGGAAACAGGGCGCAAAGTCTGCAGAGGAGGAGCTCGCCAAGGCTGGCTGGCTACTCGACCTGCAGCATCTGACTCTGGGAGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS CCA 72 bp | CTCCTCCTCTGCAGACTTTGCGCCCTGTTTCCTCCTTaGCTTCACCAGCTTGGTGCAGATGGCCCCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LLLCRLCALFPP*LHQLGADGPLV Trigger: GACAAGGGGGCCATCTGCACCAAGCTGGTGAAGCCAAGGAGGAAACAGGGCGCAAAGTCTGCAGAGGAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS CAA 90 bp | AGCCCTTCCTGCCCACTGCCATGGTGCTTGGCTCGGTACCAGCTCTaGTCCTCACAGGCCTCCAAGATGGTCACCATGTCACCCTTTCGA | + |
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Preference number: 6 (lower is better) Translates to: SPSCPLPWCLARYQL*SSQASKMVTMSPFR Trigger: TCGAAAGGGTGACATGGTGACCATCTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAGCCAAGCACCATGGCAGTGGGCAGGAAGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 ENSMUST00000130282.8 |
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| CDS GCA 72 bp | CAGCAACATGAAGAGCAAACTGCAGAAGCTGAGAGGTaGTCACAAGAGCACGGCCCCGCGTGCGCAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: QQHEEQTAEAER*SQEHGPACAGS Trigger: ACTTCCTGCGCACGCGGGGCCGTGCTCTTGTGAGCACCTCTCAGCTTCTGCAGTTTGCTCTTCATGTTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS TCA 72 bp | AGCTGCTGTATGGCTTCCTGGCCGGAGATCTTGCCATaGAACCATGGCATGAGGCTGAGCTTGGGGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SCCMASWPEILP*NHGMRLSLGSV Trigger: CACAGACCCCAAGCTCAGCCTCATGCCATGGTTTCATGGCAAGATCTCCGGCCAGGAAGCCATACAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 ENSMUST00000130282.8 |
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| CDS TCA 72 bp | ACTGACACACAAGACATAGTCTCCAGGGTGACGAGCTaGTTCCCTCACAAGGAACAGCCCGTCCTCGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TDTQDIVSRVTS*FPHKEQPVLGW Trigger: CCACCCGAGGACGGGCTGTTCCTTGTGAGGGAATCAGCTCGTCACCCTGGAGACTATGTCTTGTGTGTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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| CDS CCA 72 bp | CCCTTGCTCACGTGCTCCATGACAATGTACAAGCCGTaGTGCAGGATCACACCCAGGAGTCGCACTAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: PLLTCSMTMYKP*CRITPRSRTRF Trigger: GAACCTAGTGCGACTCCTGGGTGTGATCCTGCACCACGGCTTGTACATTGTCATGGAGCACGTGAGCAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS TCA 72 bp | GGAAGTTCACCAGGTTGCCCTTGCTCACGTGCTCCATaGCAATGTACAAGCCGTGGTGCAGGATCACACCCA | + |
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Preference number: 6 (lower is better) Translates to: GSSPGCPCSRAP*QCTSRGAGSHP Trigger: TGGGTGTGATCCTGCACCACGGCTTGTACATTGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS CCA 72 bp | CTCGGTACCAGCTCTTGTCCTCACAGGCCTCCAAGATaGTCACCATGTCACCCTTTCGAAAGGCTAGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LGTSSCPHRPPR*SPCHPFERLAH Trigger: GTGAGCTAGCCTTTCGAAAGGGTGACATGGTGACCATCTTGGAGGCCTGTGAGGACAAGAGCTGGTACCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 ENSMUST00000130282.8 |
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| CDS CCA 72 bp | GCTTCACCAGCTTGGTGCAGATGGCCCCCTTGTCCTTaGTGTAGTGCTCCACCATGTCCATCAGGTTACAGA | + |
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Preference number: 6 (lower is better) Translates to: ASPAWCRWPPCP*CSAPPCPSGYR Trigger: TCTGTAACCTGATGGACATGGTGGAGCACTACACCAAGGACAAGGGGGCCATCTGCACCAAGCTGGTGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 |
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| CDS TCA 72 bp | CCATCAGGTTACAGAAACACACGGCCTCATCGATGGTaGGGTGCCCATCTCGATGCAAAACACGGTAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: PSGYRNTRPHRW*GAHLDAKHGSG Trigger: TCCACTACCGTGTTTTGCATCGAGATGGGCACCTCACCATCGATGAGGCCGTGTGTTTCTGTAACCTGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000105328.10 ENSMUST00000117488.8 ENSMUST00000119547.8 ENSMUST00000120265.2 ENSMUST00000121205.8 ENSMUST00000128576.8 |
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