Pregenerated sensors for MAT2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042032Ensembl transcript IDs: ENSMUST00000040167.11, ENSMUST00000101347.10, ENSMUST00000141830.8
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGATGGATCCAGCATCCTCTTCTCTGCCAGCTGCCGGCACACACTaGCTACGTCTTTCACATGTGTGGGGAACCTCTGCTGCCAATGGT | + |
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Preference number: 1 (lower is better) Translates to: WMDPASSSLPAAGTH*LRLSHVWGTSAANG Trigger: ACCATTGGCAGCAGAGGTTCCCCACACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAGCTGGCAGAGAAGAGGATGCTGGATCCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR CCA 90 bp | TCTCTGCCAGCTGCCGGCACACACTGGCTACGTCTTTCACATGTGTaGGGAACCTCTGCTGCCAATGGTCCATGTTTGCTGACTTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: SLPAAGTHWLRLSHV*GTSAANGPCLLTCC Trigger: GCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTTCCCCACACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAGCTGGCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR CCA 90 bp | ACACTGGCTACGTCTTTCACATGTGTGGGGAACCTCTGCTGCCAATaGTCCATGTTTGCTGACTTGTTGCTGAACTGCACCTTGTCGAAC | + |
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Preference number: 1 (lower is better) Translates to: TLATSFTCVGNLCCQ*SMFADLLLNCTLSN Trigger: GTTCGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTTCCCCACACATGTGAAAGACGTAGCCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR TCA 90 bp | TTTCACATGTGTGGGGAACCTCTGCTGCCAATGGTCCATGTTTGCTaGCTTGTTGCTGAACTGCACCTTGTCGAACATAACAGTCACAGC | + |
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Preference number: 1 (lower is better) Translates to: FHMCGEPLLPMVHVC*LVAELHLVEHNSHS Trigger: GCTGTGACTGTTATGTTCGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTTCCCCACACATGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR GCA 90 bp | AACCTCTGCTGCCAATGGTCCATGTTTGCTGACTTGTTGCTGAACTaGACCTTGTCGAACATAACAGTCACAGCACTTTCTTCAAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: NLCCQWSMFADLLLN*TLSNITVTALSSSF Trigger: AAAGCTTGAAGAAAGTGCTGTGACTGTTATGTTCGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR TCA 90 bp | ATCTTCTTCTGTGTAAGGGGGATTTGTGCCATCAAACACATAATCTaGGCTAATGTAGATGAGAAATGCTCCAATCGCAGCTGCCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: IFFCVRGICAIKHII*ANVDEKCSNRSCLL Trigger: AAGGAGGCAGCTGCGATTGGAGCATTTCTCATCTACATTAGCTCAGATTATGTGTTTGATGGCACAAATCCCCCTTACACAGAAGAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCGGCACACACTGGCTACGTCTTTCACATGTGTGGGGAACCTCTGCTGCCAATGGTCCATGTTTGCTaGCTTGTTGCTGAACTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LPAHTGYVFHMCGEPLLPMVHVC*LVAELH Trigger: GTGCAGTTCAGCAACAAGTCAGCAAACATGGACCAT...TGGCAGCAGAGGTTCCCCACACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTACGTCTTTCACATGTGTGGGGAACCTCTGCTGCCAATGGTCCATGTTTGCTGCTCCAATCGCAGCTaGCTCCTTTGCCAAGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GYVFHMCGEPLLPMVHVCCSNRS*LLCQVP Trigger: GGGAACTTGGCAAAGGAGGCAGCTGCGATTGGAGCA...GCAAACATGGACCATTGGCAGCAGAGGTTCCCCACACATGTGAAAGACGTAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR GCA 90 bp | CCATACAGAACAGGAATTCTCAACACAGCAGCCCCTAAATTATTCTCCAGGACTCGCAGCTGCCTCCTTTaGCAAGTTCCCAGAGGCACC | + |
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Preference number: 2 (lower is better) Translates to: PYRTGILNTAAPKLFSRTRSCLL*QVPRGT Trigger: GGTGCCTCTGGGAACTTGGCAAAGGAGGCAGCTGCG...AGTCCTGGAGAATAATTTAGGGGCTGCTGTGTTGAGAATTCCTGTTCTGTATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTGCCAGCTGCCGGCACACACTGGCTACGTCTTTCACATGTGTGGGGAACGACTTGTTGCTGAACTaGACCTTGTCGAACATAACA | + |
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Preference number: 2 (lower is better) Translates to: FSASCRHTLATSFTCVGNDLLLN*TLSNIT Trigger: TGTTATGTTCGACAAGGTGCAGTTCAGCAACAAGTC...GTTCCCCACACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAGCTGGCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGGGGAGGTTGAAGGCATCTGCAATTGCACACGCCATTTCATACTTGGTCTGTGTGGGGAACCTCTaGTGCCAATGGTCCATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLGRLKASAIAHAISYLVCVGNL*CQWSMF Trigger: AAACATGGACCATTGGCAGCAGAGGTTCCCCACACA...GACCAAGTATGAAATGGCGTGTGCAATTGCAGATGCCTTCAACCTCCCCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGAAGGCATCTGCAATTGCACACGCCATTTCATACTTGGTCATCTGCTCATTCTCTTCTCTGCCAGCTaGCGGCACACACTGGCTACG | + |
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Preference number: 2 (lower is better) Translates to: VEGICNCTRHFILGHLLILFSAS*RHTLAT Trigger: CGTAGCCAGTGTGTGCCGGCAGCTGGCAGAGAAGAG...AATGAGCAGATGACCAAGTATGAAATGGCGTGTGCAATTGCAGATGCCTTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTACGTCTTTCACATGTGTGGGGAACCTCTGCTGCCAATGGTCCATGTTTGCAATGTAGATGAGAAATaGTCCAATCGCAGCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: GYVFHMCGEPLLPMVHVCNVDEK*SNRSCL Trigger: GAGGCAGCTGCGATTGGAGCATTTCTCATCTACATT...GCAAACATGGACCATTGGCAGCAGAGGTTCCCCACACATGTGAAAGACGTAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR CAA 90 bp | TGTGTGGGGAACCTCTGCTGCCAATGGTCCATGTTTGCTGACTTGTaGCTGAACTGCACCTTGTCGAACATAACAGTCACAGCACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: CVGNLCCQWSMFADL*LNCTLSNITVTALS Trigger: AGAAAGTGCTGTGACTGTTATGTTCGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTTCCCCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR CAA 90 bp | ACATGTGTGGGGAACCTCTGCTGCCAATGGTCCATGTTTGCTGACTaGTTGCTGAACTGCACCTTGTCGAACATAACAGTCACAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: TCVGNLCCQWSMFAD*LLNCTLSNITVTAL Trigger: AAGTGCTGTGACTGTTATGTTCGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTTCCCCACACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGAAGGCATCTGCAATTGCACACGCCATTTCATACTTGGTCATCTGCTCATTTGTAAGGGGGATTTGTaGCATCAAACACATAATCTG | + |
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Preference number: 2 (lower is better) Translates to: VEGICNCTRHFILGHLLICKGDL*HQTHNL Trigger: CAGATTATGTGTTTGATGGCACAAATCCCCCTTACA...AATGAGCAGATGACCAAGTATGAAATGGCGTGTGCAATTGCAGATGCCTTCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR CAA 90 bp | AGCATCCTCTTCTCTGCCAGCTGCCGGCACACACTGGCTACGTCTTTCACATGTTCGCAGCTGCCTCCTTaGCCAAGTTCCCAGAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: SILFSASCRHTLATSFTCSQLPP*PSSQRH Trigger: GTGCCTCTGGGAACTTGGCAAAGGAGGCAGCTGCGA...ACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAGCTGGCAGAGAAGAGGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR CCA 72 bp | GCTGCCGGCACACACTGGCTACGTCTTTCACATGTGTaGGGAACCTCTGCTGCCAATGGTCCATGTTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: AAGTHWLRLSHV*GTSAANGPCLL Trigger: CAGCAAACATGGACCATTGGCAGCAGAGGTTCCCCACACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR GCA 72 bp | GGTTCCCTTAATGGATGGATCCAGCATCCTCTTCTCTaGCAGCTGCCGGCACACACTGGCTACGTCTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: GSLNGWIQHPLL*QLPAHTGYVFH Trigger: GTGAAAGACGTAGCCAGTGTGTGCCGGCAGCTGGCAGAGAAGAGGATGCTGGATCCATCCATTAAGGGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAGCTGCCGGCACACACTGGCTACGTCTTTCACATGTGTGGGGAACCTCTGCTTGCTGAACTGCACCTaGTCGAACATAACAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: ASCRHTLATSFTCVGNLCLLNCT*SNITVT Trigger: TGTGACTGTTATGTTCGACAAGGTGCAGTTCAGCAA...GCAGAGGTTCCCCACACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCCGGCACACACTGGCTACGTCTTTCACATGTGTGGGGAACCTCTGCTGCCAATGTTTGCTGACTTGTaGCTGAACTGCACCTTGTCG | + |
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Preference number: 3 (lower is better) Translates to: LPAHTGYVFHMCGEPLLPMFADL*LNCTLS Trigger: CGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACAT...TGGCAGCAGAGGTTCCCCACACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR GCA 72 bp | ACACTGGCTACGTCTTTCACATGTGTGGGGAACCTCTaGTGCCAATGGTCCATGTTTGCTGACTTGTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: TLATSFTCVGNL*CQWSMFADLLL Trigger: CAGCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTTCCCCACACATGTGAAAGACGTAGCCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR CCA 72 bp | ACGTCTTTCACATGTGTGGGGAACCTCTGCTGCCAATaGTCCATGTTTGCTGACTTGTTGCTGAACTGCACC | + |
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Preference number: 3 (lower is better) Translates to: TSFTCVGNLCCQ*SMFADLLLNCT Trigger: GGTGCAGTTCAGCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTTCCCCACACATGTGAAAGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGTGAAAGGTTCCCTTAATGGATGGATCCAGCATCCTCTTCTCTGCCAGCTGTCCATGTTTGCTGACTaGTTGCTGAACTGCACCTTG | + |
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Preference number: 3 (lower is better) Translates to: PVKGSLNGWIQHPLLCQLSMFAD*LLNCTL Trigger: CAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGA...CAGCTGGCAGAGAAGAGGATGCTGGATCCATCCATTAAGGGAACCTTTCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR TCA 72 bp | TGTGGGGAACCTCTGCTGCCAATGGTCCATGTTTGCTaGCTTGTTGCTGAACTGCACCTTGTCGAACATAAC | + |
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Preference number: 3 (lower is better) Translates to: CGEPLLPMVHVC*LVAELHLVEHN Trigger: GTTATGTTCGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTTCCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| 3UTR TCA 72 bp | ACGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATaGAGTAGGCATCAGGCTATACAGGTTCTGATATAC | + |
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Preference number: 3 (lower is better) Translates to: TCTLSSVCHTVL*SRHQAIQVLIY Trigger: GTATATCAGAACCTGTATAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| 3UTR-3UTR CAA 90 bp | CGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATGAAGTAGGCATCAGGCTACATAATTTACATTACTaGTATAGCGAGGTAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: RALSQVFATQCYEVGIRLHNLHY*YSEVSQ Trigger: CTGGCTTACCTCGCTATACAAGTAATGTAAATTATG...TAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| 3UTR TCA 72 bp | TGTGTAAGGGGGATTTGTGCCATCAAACACATAATCTaGGCTAATGTAGATGAGAAATGCTCCAATCGCAGC | + |
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Preference number: 3 (lower is better) Translates to: CVRGICAIKHII*ANVDEKCSNRS Trigger: GCTGCGATTGGAGCATTTCTCATCTACATTAGCTCAGATTATGTGTTTGATGGCACAAATCCCCCTTACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTGCCAGCTGCCGGCACACACTGGCTACGTCTTTCACATGTGTGGGGAACCAGCCGGGGACGAAGTaGATGGAGAGCTCCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSASCRHTLATSFTCVGNQPGTK*MESSFS Trigger: GGAGAAGGAGCTCTCCATCCACTTCGTCCCCGGCTG...GTTCCCCACACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAGCTGGCAGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| CDS-3UTR GCA 90 bp | CGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATGAAGTAGGCATCAGGCTACGCAGCTGCCTCCTTTaGCAAGTTCCCAGAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: RALSQVFATQCYEVGIRLRSCLL*QVPRGT Trigger: GGTGCCTCTGGGAACTTGGCAAAGGAGGCAGCTGCG...TAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR CCA 90 bp | TTGTTGCTGAACTGCACCTTGTCGAACATAACAGTCACAGCACTTTCTTCAAGCCGGGGACGAAGTGGATaGAGAGCTCCTTCTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LLLNCTLSNITVTALSSSRGRSG*RAPSPG Trigger: GCCGGGAGAAGGAGCTCTCCATCCACTTCGTCCCCG...GCTTGAAGAAAGTGCTGTGACTGTTATGTTCGACAAGGTGCAGTTCAGCAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| CDS-3UTR TCA 90 bp | GCCGGCACACACTGGCTACGTCTTTCACATGTGTGGGGAACCTCTGCTGCCAATTCTGGAAATCATGAATaGGGTGATGAACAGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: AGTHWLRLSHVWGTSAANSGNHE*GDEQLQ Trigger: CTGAAGCTGTTCATCACCTCATTCATGATTTCCAGA...ATTGGCAGCAGAGGTTCCCCACACATGTGAAAGACGTAGCCAGTGTGTGCCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| CDS-3UTR GCA 90 bp | CGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATGAAGTAGGCATCAGGCTATGTGTGGGGAACCTCTaGTGCCAATGGTCCATGTTT | + |
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Preference number: 4 (lower is better) Translates to: RALSQVFATQCYEVGIRLCVGNL*CQWSMF Trigger: AAACATGGACCATTGGCAGCAGAGGTTCCCCACACA...TAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR GCA 90 bp | GTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCATCCCGCCCTCTTCTCTGCCAGCTaGCGGCACACACTGGCTACG | + |
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Preference number: 4 (lower is better) Translates to: VGMNNAFHPKSNSLFHPALFSAS*RHTLAT Trigger: CGTAGCCAGTGTGTGCCGGCAGCTGGCAGAGAAGAG...GGCGGGATGAAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR CCA 90 bp | CTAGTGCAACAGCATTGTTTACCTGAAGGATCATGTGTCACAATTAAGGAGTACCGGGGACGAAGTGGATaGAGAGCTCCTTCTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LVQQHCLPEGSCVTIKEYRGRSG*RAPSPG Trigger: GCCGGGAGAAGGAGCTCTCCATCCACTTCGTCCCCG...GTACTCCTTAATTGTGACACATGATCCTTCAGGTAAACAATGCTGTTGCACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040167.11 |
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| 3UTR CAA 72 bp | GGGAACCTCTGCTGCCAATGGTCCATGTTTGCTGACTaGTTGCTGAACTGCACCTTGTCGAACATAACAGTC | + |
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Preference number: 4 (lower is better) Translates to: GNLCCQWSMFAD*LLNCTLSNITV Trigger: GACTGTTATGTTCGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
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| CDS-3UTR GCA 90 bp | CTAGTGCAACAGCATTGTTTACCTGAAGGATCATGTGTCACAATTAAGGAGTACCGCAGCTGCCTCCTTTaGCAAGTTCCCAGAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: LVQQHCLPEGSCVTIKEYRSCLL*QVPRGT Trigger: GGTGCCTCTGGGAACTTGGCAAAGGAGGCAGCTGCG...GTACTCCTTAATTGTGACACATGATCCTTCAGGTAAACAATGCTGTTGCACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR GCA 90 bp | CCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCGAGGTAAGCCAGCTCTTCTCTGCCAGCTaGCGGCACACACTGGCTACG | + |
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Preference number: 4 (lower is better) Translates to: PSDITDHNLHYLYSEVSQLFSAS*RHTLAT Trigger: CGTAGCCAGTGTGTGCCGGCAGCTGGCAGAGAAGAG...CTGGCTTACCTCGCTATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR GCA 90 bp | CGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATGAAGTAGGCATCAGGCTATGGTCATCTGCTCATTaGCAGACCAGTGAAAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: RALSQVFATQCYEVGIRLWSSAH*QTSERF Trigger: GAACCTTTCACTGGTCTGGCAATGAGCAGATGACCA...TAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR CCA 90 bp | CGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATGAAGTAGGCATCAGGCTAGTAATAGGTCTTAAGTaGCTGCTGGGGAGGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RALSQVFATQCYEVGIRLVIGLK*LLGRLK Trigger: CTTCAACCTCCCCAGCAGCCACTTAAGACCTATTAC...TAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR TCA 90 bp | CGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATGAAGTAGGCATCAGGCTACAGCACAATGCACTATaGCATGAGGCTGGAAATCAT | + |
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Preference number: 4 (lower is better) Translates to: RALSQVFATQCYEVGIRLQHNAL*HEAGNH Trigger: ATGATTTCCAGCCTCATGTCATAGTGCATTGTGCTG...TAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR GCA 90 bp | GTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCATCCCGCCTGCTCCAATCGCAGCTaGCTCCTTTGCCAAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: VGMNNAFHPKSNSLFHPACSNRS*LLCQVP Trigger: GGGAACTTGGCAAAGGAGGCAGCTGCGATTGGAGCA...GGCGGGATGAAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR GCA 90 bp | CTAGTGCAACAGCATTGTTTACCTGAAGGATCATGTGTCACAATTAAGGAGTACCAGCATCCTCTTCTCTaGCAGCTGCCGGCACACACT | + |
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Preference number: 4 (lower is better) Translates to: LVQQHCLPEGSCVTIKEYQHPLL*QLPAHT Trigger: AGTGTGTGCCGGCAGCTGGCAGAGAAGAGGATGCTG...GTACTCCTTAATTGTGACACATGATCCTTCAGGTAAACAATGCTGTTGCACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR GCA 90 bp | CGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATGAAGTAGGCATCAGGCTAGACTTGTTGCTGAACTaGACCTTGTCGAACATAACA | + |
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Preference number: 4 (lower is better) Translates to: RALSQVFATQCYEVGIRLDLLLN*TLSNIT Trigger: TGTTATGTTCGACAAGGTGCAGTTCAGCAACAAGTC...TAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR GCA 90 bp | GTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCATCCCGCCGTGGGGAACCTCTGCTaGCAATGGTCCATGTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: VGMNNAFHPKSNSLFHPAVGNLC*QWSMFA Trigger: AGCAAACATGGACCATTGGCAGCAGAGGTTCCCCAC...GGCGGGATGAAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS-3UTR CCA 90 bp | CTAGTGCAACAGCATTGTTTACCTGAAGGATCATGTGTCACAATTAAGGAGTACGCTGCCGGCACACACTaGCTACGTCTTTCACATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVQQHCLPEGSCVTIKEYAAGTH*LRLSHV Trigger: CACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAGC...GTACTCCTTAATTGTGACACATGATCCTTCAGGTAAACAATGCTGTTGCACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| 3UTR CAA 72 bp | AACCTCTGCTGCCAATGGTCCATGTTTGCTGACTTGTaGCTGAACTGCACCTTGTCGAACATAACAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NLCCQWSMFADL*LNCTLSNITVT Trigger: TGTGACTGTTATGTTCGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTGGCTGCTGGGGAGGTTaGAGGCATCTGCAATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFGCWGG*RHLQLH Trigger: GTGCAATTGCAGATGCCTTCAACCTCCCCAGCAGCC...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCAGCATCCTCTTCTCTaGCAGCTGCCGGCACACACT | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFQHPLL*QLPAHT Trigger: AGTGTGTGCCGGCAGCTGGCAGAGAAGAGGATGCTG...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | CCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCGAGGTAAGCCAGGTGTCCTCTGGCCAATaGCCAACGTCTCCAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSDITDHNLHYLYSEVSQVSSGQ*PTSPIW Trigger: CCAAATTGGAGACGTTGGGCATTGGCCAGAGGACAC...CTGGCTTACCTCGCTATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCAGCCGGGGACGAAGTaGATGGAGAGCTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNKTTARKEAVGMNNAFHQPGTK*MESSFS Trigger: GGAGAAGGAGCTCTCCATCCACTTCGTCCCCGGCTG...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040167.11 |
||
| CDS-3UTR TCA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATGGCTGCTGGGGAGGTTaGAGGCATCTGCAATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TNKTTARKEAVGMNNAFHGCWGG*RHLQLH Trigger: GTGCAATTGCAGATGCCTTCAACCTCCCCAGCAGCC...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | GTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCATCCCGCCTCCATCTCTTGTCGATaGGGAAAGGCCAGAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VGMNNAFHPKSNSLFHPASISCR*GKAREI Trigger: AATCTCTCTGGCCTTTCCTCATCGACAAGAGATGGA...GGCGGGATGAAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | CTAGTGCAACAGCATTGTTTACCTGAAGGATCATGTGTCACAATTAAGGAGTACTGTGTGGGGAACCTCTaGTGCCAATGGTCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVQQHCLPEGSCVTIKEYCVGNL*CQWSMF Trigger: AAACATGGACCATTGGCAGCAGAGGTTCCCCACACA...GTACTCCTTAATTGTGACACATGATCCTTCAGGTAAACAATGCTGTTGCACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | CTAGTGCAACAGCATTGTTTACCTGAAGGATCATGTGTCACAATTAAGGAGTACCGTCTTTCACATGTGTaGGGAACCTCTGCTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVQQHCLPEGSCVTIKEYRLSHV*GTSAAN Trigger: ATTGGCAGCAGAGGTTCCCCACACATGTGAAAGACG...GTACTCCTTAATTGTGACACATGATCCTTCAGGTAAACAATGCTGTTGCACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCATCCCGCCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCTGCCGGCACACACTaGCTACGTCTTTCACATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRPRTLQIIIYITCIAAGTH*LRLSHV Trigger: CACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAGC...TATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGGCGGGATGAAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | GTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCATCCCGCCGTAATAGGTCTTAAGTaGCTGCTGGGGAGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGMNNAFHPKSNSLFHPAVIGLK*LLGRLK Trigger: CTTCAACCTCCCCAGCAGCCACTTAAGACCTATTAC...GGCGGGATGAAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCGAAATGGTGTCCTCTaGCCAATGCCCAACGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFRNGVL*PMPNVS Trigger: GGAGACGTTGGGCATTGGCCAGAGGACACCATTTCG...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | CCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCGAGGTAAGCCAGGATTCCAGTTCGAAATaGTGTCCTCTGGCCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSDITDHNLHYLYSEVSQDSSSK*CPLANA Trigger: GGCATTGGCCAGAGGACACCATTTCGAACTGGAATC...CTGGCTTACCTCGCTATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | AACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCCACTTCCTCCTGTTCCATaGCCTCCGGCATTTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKTTARKEAVGMNNAFHPLPPVP*PPAFQA Trigger: TGCCTGAAATGCCGGAGGCCATGGAACAGGAGGAAG...TGGATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | TTGTTGCTGAACTGCACCTTGTCGAACATAACAGTCACAGCACTTTCTTCAAGCAAACTCTTTGTAAACTaGTCTGCCAAGAAGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLNCTLSNITVTALSSSKLFVN*SAKKPS Trigger: ACTGGGCTTCTTGGCAGAGCAGTTTACAAAGAGTTT...GCTTGAAGAAAGTGCTGTGACTGTTATGTTCGACAAGGTGCAGTTCAGCAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATTGCTCCAATCGCAGCTaGCTCCTTTGCCAAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNKTTARKEAVGMNNAFHCSNRS*LLCQVP Trigger: GGGAACTTGGCAAAGGAGGCAGCTGCGATTGGAGCA...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTGTGGGGAACCTCTGCTaGCAATGGTCCATGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFVGNLC*QWSMFA Trigger: AGCAAACATGGACCATTGGCAGCAGAGGTTCCCCAC...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTGTGTCCTCTGGCCAATaGCCAACGTCTCCAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFVSSGQ*PTSPIW Trigger: CCAAATTGGAGACGTTGGGCATTGGCCAGAGGACAC...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | CTAGTGCAACAGCATTGTTTACCTGAAGGATCATGTGTCACAATTAAGGAGTACAACCTCTGCTGCCAATaGTCCATGTTTGCTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVQQHCLPEGSCVTIKEYNLCCQ*SMFADL Trigger: CAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTT...GTACTCCTTAATTGTGACACATGATCCTTCAGGTAAACAATGCTGTTGCACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCGAAATGGTGTCCTCTaGCCAATGCCCAACGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNKTTARKEAVGMNNAFHRNGVL*PMPNVS Trigger: GGAGACGTTGGGCATTGGCCAGAGGACACCATTTCG...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | CCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCGAGGTAAGCCAGCAGCACAATGCACTATaGCATGAGGCTGGAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSDITDHNLHYLYSEVSQQHNAL*HEAGNH Trigger: ATGATTTCCAGCCTCATGTCATAGTGCATTGTGCTG...CTGGCTTACCTCGCTATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | CCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCGAGGTAAGCCAGAATGTAGATGAGAAATaGTCCAATCGCAGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSDITDHNLHYLYSEVSQNVDEK*SNRSCL Trigger: GAGGCAGCTGCGATTGGAGCATTTCTCATCTACATT...CTGGCTTACCTCGCTATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | CTAGTGCAACAGCATTGTTTACCTGAAGGATCATGTGTCACAATTAAGGAGTACACGCCATTTCATACTTaGTCATCTGCTCATTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVQQHCLPEGSCVTIKEYTPFHT*SSAHCQ Trigger: CTGGCAATGAGCAGATGACCAAGTATGAAATGGCGT...GTACTCCTTAATTGTGACACATGATCCTTCAGGTAAACAATGCTGTTGCACTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCATCCCGCCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGATTCCAGTTCGAAATaGTGTCCTCTGGCCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRPRTLQIIIYITCIDSSSK*CPLANA Trigger: GGCATTGGCCAGAGGACACCATTTCGAACTGGAATC...TATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGGCGGGATGAAACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | AACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCCATTGCTGACTTGTTGCTaGACTGCACCTTGTCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: NKTTARKEAVGMNNAFHPLLTCC*TAPCRT Trigger: TGTTCGACAAGGTGCAGTTCAGCAACAAGTCAGCAA...TGGATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCATCCCGCCCTCGGACATTACAGATCATAATTTACATTACTTGTATATTGCTGACTTGTTGCTaGACTGCACCTTGTCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRPRTLQIIIYITCILLTCC*TAPCRT Trigger: TGTTCGACAAGGTGCAGTTCAGCAACAAGTCAGCAA...TATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGGCGGGATGAAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | AACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAATGGTCCATGTTTGCTaGCTTGTTGCTGAACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKTTARKEAVGMNNAFHPMVHVC*LVAELH Trigger: GTGCAGTTCAGCAACAAGTCAGCAAACATGGACCAT...TGGATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCATCCCGCCCTCGGACATTACAGATCATAATTTACATTACTTGTATAATGGTCCATGTTTGCTaGCTTGTTGCTGAACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRPRTLQIIIYITCIMVHVC*LVAELH Trigger: GTGCAGTTCAGCAACAAGTCAGCAAACATGGACCAT...TATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGGCGGGATGAAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTTCCATCTCTTGTCGATaGGGAAAGGCCAGAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFSISCR*GKAREI Trigger: AATCTCTCTGGCCTTTCCTCATCGACAAGAGATGGA...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | CTAGTGCAACAGCATTGTTTACCTGAAGGATCATGTGTCACAATTAAGGAGTACAAACTCTTTGTAAACTaGTCTGCCAAGAAGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVQQHCLPEGSCVTIKEYKLFVN*SAKKPS Trigger: ACTGGGCTTCTTGGCAGAGCAGTTTACAAAGAGTTT...GTACTCCTTAATTGTGACACATGATCCTTCAGGTAAACAATGCTGTTGCACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | GTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCATCCCGCCTGTAAGGGGGATTTGTaGCATCAAACACATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGMNNAFHPKSNSLFHPACKGDL*HQTHNL Trigger: CAGATTATGTGTTTGATGGCACAAATCCCCCTTACA...GGCGGGATGAAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | CCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCGAGGTAAGCCAGGACTTGTTGCTGAACTaGACCTTGTCGAACATAACA | + |
|
Preference number: 4 (lower is better) Translates to: PSDITDHNLHYLYSEVSQDLLLN*TLSNIT Trigger: TGTTATGTTCGACAAGGTGCAGTTCAGCAACAAGTC...CTGGCTTACCTCGCTATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTTGGTCATCTGCTCATTaGCAGACCAGTGAAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFWSSAH*QTSERF Trigger: GAACCTTTCACTGGTCTGGCAATGAGCAGATGACCA...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | CCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCGAGGTAAGCCAGGAAGGCATCTGCAATTaGACACGCCATTTCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: PSDITDHNLHYLYSEVSQEGICN*TRHFIL Trigger: AAGTATGAAATGGCGTGTGCAATTGCAGATGCCTTC...CTGGCTTACCTCGCTATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTGAGGTTGAAGGCATCTaGAATTGCACACGCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFEVEGI*NCTRHF Trigger: GAAATGGCGTGTGCAATTGCAGATGCCTTCAACCTC...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCATCCCGCCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGAGGTTGAAGGCATCTaGAATTGCACACGCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRPRTLQIIIYITCIEVEGI*NCTRHF Trigger: GAAATGGCGTGTGCAATTGCAGATGCCTTCAACCTC...TATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGGCGGGATGAAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTCATCCCGCCCTCGGACATTACAGATCATAATTTACATTACTTGTATAAACCTCTGCTGCCAATaGTCCATGTTTGCTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRPRTLQIIIYITCINLCCQ*SMFADL Trigger: CAAGTCAGCAAACATGGACCATTGGCAGCAGAGGTT...TATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGGCGGGATGAAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCCAACGTCTCCAATTTaGAGCAATCGAGCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFPTSPI*SNRAEH Trigger: ATGCTCAGCTCGATTGCTCCAAATTGGAGACGTTGG...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | AACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCCACCAACGTCTCCAATTTaGAGCAATCGAGCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKTTARKEAVGMNNAFHPPTSPI*SNRAEH Trigger: ATGCTCAGCTCGATTGCTCCAAATTGGAGACGTTGG...TGGATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCATCCCGCCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCTGGAAATCATGAATaGGGTGATGAACAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRPRTLQIIIYITCIAGNHE*GDEQLQ Trigger: CTGAAGCTGTTCATCACCTCATTCATGATTTCCAGC...TATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGGCGGGATGAAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTTCATTGCCAGACCAGTaGAAGGTTCCCTTAATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFSLPDQ*KVPLMD Trigger: ATCCATTAAGGGAACCTTTCACTGGTCTGGCAATGA...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTGCCAGAGAGATTCTTTaGTTCCAGTTCGAAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFAREIL*FQFEMV Trigger: CACCATTTCGAACTGGAATCAAAGAATCTCTCTGGC...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | AACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCCATTCGAATTTTGGTCTTaGTCTTCGAAAGCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKTTARKEAVGMNNAFHPFEFWS*SSKATA Trigger: GGCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAA...TGGATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTTTCGAATTTTGGTCTTaGTCTTCGAAAGCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFFEFWS*SSKATA Trigger: GGCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAA...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTATCAGGTCTTCTCTCTaGAGCACAATGCACTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFIRSSL*STMHYD Trigger: GTCATAGTGCATTGTGCTGCAGAGAGAAGACCTGAT...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | AACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAACGCCATTTCATACTTaGTCATCTGCTCATTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKTTARKEAVGMNNAFHPTPFHT*SSAHCQ Trigger: CTGGCAATGAGCAGATGACCAAGTATGAAATGGCGT...TGGATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATTCATTGCCAGACCAGTaGAAGGTTCCCTTAATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TNKTTARKEAVGMNNAFHSLPDQ*KVPLMD Trigger: ATCCATTAAGGGAACCTTTCACTGGTCTGGCAATGA...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR TCA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATGCCAGAGAGATTCTTTaGTTCCAGTTCGAAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TNKTTARKEAVGMNNAFHAREIL*FQFEMV Trigger: CACCATTTCGAACTGGAATCAAAGAATCTCTCTGGC...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCATCCCGCCCTCGGACATTACAGATCATAATTTACATTACTTGTATAAAACTCTTTGTAAACTaGTCTGCCAAGAAGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRPRTLQIIIYITCIKLFVN*SAKKPS Trigger: ACTGGGCTTCTTGGCAGAGCAGTTTACAAAGAGTTT...TATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGGCGGGATGAAACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATATCAGGTCTTCTCTCTaGAGCACAATGCACTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TNKTTARKEAVGMNNAFHIRSSL*STMHYD Trigger: GTCATAGTGCATTGTGCTGCAGAGAGAAGACCTGAT...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTGAAGGCATCTGCAATTaGACACGCCATTTCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFEGICN*TRHFIL Trigger: AAGTATGAAATGGCGTGTGCAATTGCAGATGCCTTC...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR GCA 90 bp | AACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCCATGTAAGGGGGATTTGTaGCATCAAACACATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTTARKEAVGMNNAFHPCKGDL*HQTHNL Trigger: CAGATTATGTGTTTGATGGCACAAATCCCCCTTACA...TGGATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCACTTGTTCGAATTTTaGTCTTGCTCTTCGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TNKTTARKEAVGMNNAFHHLFEF*SCSSKA Trigger: GGCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTG...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS TCA 90 bp | GTCCTCTGGCCAATGCCCAACGTCTCCAATTTGGAGCAATCGAGCTaGGCATTTTTGGGGCGCTGTGCTCCTATGACAGGACTGTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VLWPMPNVSNLEQSS*AFLGRCAPMTGLSV Trigger: TACTGACAGTCCTGTCATAGGAGCACAGCGCCCCAAAAATGCTCAGCTCGATTGCTCCAAATTGGAGACGTTGGGCATTGGCCAGAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS CCA 90 bp | TGCCAAGTTCCCAGAGGCACCCACATTCAGCTGGGAAGCAGCATCTaGCTGACTCTCAACAACATCAGGTCTTCTCTCTGCAGCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: CQVPRGTHIQLGSSI*LTLNNIRSSLCSTM Trigger: CATTGTGCTGCAGAGAGAAGACCTGATGTTGTTGAGAGTCAGCCAGATGCTGCTTCCCAGCTGAATGTGGGTGCCTCTGGGAACTTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGCCAGCTGCCGGCACACACTGGCTACGTCTTTCACATGTGTGGGGAACGTTCGAATTTTGGTCTaGCTCTTCGAAAGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSASCRHTLATSFTCVGNVRILV*LFESHS Trigger: GCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAAC...GTTCCCCACACATGTGAAAGACGTAGCCAGTGTGTGCCGGCAGCTGGCAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
||
| CDS GCA 90 bp | ATTTTGGTCTTGCTCTTCGAAAGCCACAGCCAACGGTGTGCCAGTTaGTCTGCTGAAACTCTTTGTAAACTGCTCTGCCAAGAAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILVLLFESHSQRCAS*SAETLCKLLCQEAQ Trigger: CTGGGCTTCTTGGCAGAGCAGTTTACAAAGAGTTTCAGCAGAGCAACTGGCACACCGTTGGCTGTGGCTTTCGAAGAGCAAGACCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
||
| CDS GCA 90 bp | AACAGCTTCAGAATCCAACAGGTTCACTTGTTCGAATTTTGGTCTTaGTCTTCGAAAGCCACAGCCAACGGTGTGCCAGTTGCTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NSFRIQQVHLFEFWS*SSKATANGVPVALL Trigger: CAGCAGAGCAACTGGCACACCGTTGGCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGAACCTGTTGGATTCTGAAGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
||
| CDS-3UTR CAA 90 bp | CTAGTGCAACAGCATTGTTTACCTGAAGGATCATGTGTCACAATTAAGGAGTACTCGCAGCTGCCTCCTTaGCCAAGTTCCCAGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVQQHCLPEGSCVTIKEYSQLPP*PSSQRH Trigger: GTGCCTCTGGGAACTTGGCAAAGGAGGCAGCTGCGA...GTACTCCTTAATTGTGACACATGATCCTTCAGGTAAACAATGCTGTTGCACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | CCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCGAGGTAAGCCAGTCGCAGCTGCCTCCTTaGCCAAGTTCCCAGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSDITDHNLHYLYSEVSQSQLPP*PSSQRH Trigger: GTGCCTCTGGGAACTTGGCAAAGGAGGCAGCTGCGA...CTGGCTTACCTCGCTATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | CGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATGAAGTAGGCATCAGGCTATCCATGTTTGCTGACTaGTTGCTGAACTGCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RALSQVFATQCYEVGIRLSMFAD*LLNCTL Trigger: CAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGA...TAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS GCA 90 bp | GGAAGCAGCATCTGGCTGACTCTCAACAACATCAGGTCTTCTCTCTaGAGCACAATGCACTATGACATGAGGCTGGAAATCATGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSIWLTLNNIRSSL*STMHYDMRLEIMNE Trigger: CTCATTCATGATTTCCAGCCTCATGTCATAGTGCATTGTGCTGCAGAGAGAAGACCTGATGTTGTTGAGAGTCAGCCAGATGCTGCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | CGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATGAAGTAGGCATCAGGCTATTGCTGAACTGCACCTaGTCGAACATAACAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: RALSQVFATQCYEVGIRLLLNCT*SNITVT Trigger: TGTGACTGTTATGTTCGACAAGGTGCAGTTCAGCAA...TAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | CGTGCACTCTCTCAAGTGTTTGCCACACAGTGCTATGAAGTAGGCATCAGGCTAATCCAACAGGTTCACTaGTTCGAATTTTGGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RALSQVFATQCYEVGIRLIQQVH*FEFWSC Trigger: GCAAGACCAAAATTCGAACAAGTGAACCTGTTGGAT...TAGCCTGATGCCTACTTCATAGCACTGTGTGGCAAACACTTGAGAGAGTGCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | GTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCATCCCGCCGTTCGAATTTTGGTCTaGCTCTTCGAAAGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGMNNAFHPKSNSLFHPAVRILV*LFESHS Trigger: GCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAAC...GGCGGGATGAAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | CCATACAGAACAGGAATTCTCAACACAGCAGCCCCTAAATTATTCTCCAGGACTATCCAACAGGTTCACTaGTTCGAATTTTGGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PYRTGILNTAAPKLFSRTIQQVH*FEFWSC Trigger: GCAAGACCAAAATTCGAACAAGTGAACCTGTTGGAT...AGTCCTGGAGAATAATTTAGGGGCTGCTGTGTTGAGAATTCCTGTTCTGTATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141830.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCGAGGTAAGCCAGATGTTTGCTGACTTGTaGCTGAACTGCACCTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PSDITDHNLHYLYSEVSQMFADL*LNCTLS Trigger: CGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACAT...CTGGCTTACCTCGCTATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | GTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTCATCCCGCCGGCCAGAGAGATTCTTaGATTCCAGTTCGAAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VGMNNAFHPKSNSLFHPAGQRDS*IPVRNG Trigger: ACCATTTCGAACTGGAATCAAAGAATCTCTCTGGCC...GGCGGGATGAAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTGTTCGAATTTTGGTCTaGCTCTTCGAAAGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFVRILV*LFESHS Trigger: GCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAAC...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | CCCTCGGACATTACAGATCATAATTTACATTACTTGTATAGCGAGGTAAGCCAGTCACTTGTTCGAATTTaGGTCTTGCTCTTCGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSDITDHNLHYLYSEVSQSLVRI*VLLFES Trigger: GCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGA...CTGGCTTACCTCGCTATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTATGTTTGCTGACTTGTaGCTGAACTGCACCTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFMFADL*LNCTLS Trigger: CGACAAGGTGCAGTTCAGCAACAAGTCAGCAAACAT...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCATCCCGCCCTCGGACATTACAGATCATAATTTACATTACTTGTATACACGCCATTTCATACTaGGTCATCTGCTCATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRPRTLQIIIYITCIHAISY*VICSLP Trigger: TGGCAATGAGCAGATGACCAAGTATGAAATGGCGTG...TATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGGCGGGATGAAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAAAGTCTAACAGTCTGTTTTTGCTGAACTGCACCTaGTCGAACATAACAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KEAVGMNNAFHPKSNSLFLLNCT*SNITVT Trigger: TGTGACTGTTATGTTCGACAAGGTGCAGTTCAGCAA...AAACAGACTGTTAGACTTTGGATGAAATGCATTGTTCATTCCTACAGCTTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATTCCATGTTTGCTGACTaGTTGCTGAACTGCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNKTTARKEAVGMNNAFHSMFAD*LLNCTL Trigger: CAAGGTGCAGTTCAGCAACAAGTCAGCAAACATGGA...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCACGCCATTTCATACTaGGTCATCTGCTCATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TNKTTARKEAVGMNNAFHHAISY*VICSLP Trigger: TGGCAATGAGCAGATGACCAAGTATGAAATGGCGTG...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTCATCCCGCCCTCGGACATTACAGATCATAATTTACATTACTTGTATATCACTTGTTCGAATTTaGGTCTTGCTCTTCGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRPRTLQIIIYITCISLVRI*VLLFES Trigger: GCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGA...TATACAAGTAATGTAAATTATGATCTGTAATGTCCGAGGGCGGGATGAAACAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | AACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATCCAATCCAACAGGTTCACTaGTTCGAATTTTGGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NKTTARKEAVGMNNAFHPIQQVH*FEFWSC Trigger: GCAAGACCAAAATTCGAACAAGTGAACCTGTTGGAT...TGGATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAACAACAGCAAGAAAGGAAGCTGTAGGAATGAACAATGCATTTCATGGCCAGAGAGATTCTTaGATTCCAGTTCGAAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: TNKTTARKEAVGMNNAFHGQRDS*IPVRNG Trigger: ACCATTTCGAACTGGAATCAAAGAATCTCTCTGGCC...ATGAAATGCATTGTTCATTCCTACAGCTTCCTTTCTTGCTGTTGTTTTGTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS CCA 72 bp | CCCAGAGGCACCCACATTCAGCTGGGAAGCAGCATCTaGCTGACTCTCAACAACATCAGGTCTTCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRGTHIQLGSSI*LTLNNIRSSLC Trigger: GCAGAGAGAAGACCTGATGTTGTTGAGAGTCAGCCAGATGCTGCTTCCCAGCTGAATGTGGGTGCCTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS GCA 72 bp | GTAGATGAGAAATGCTCCAATCGCAGCTGCCTCCTTTaGCAAGTTCCCAGAGGCACCCACATTCAGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VDEKCSNRSCLL*QVPRGTHIQLG Trigger: TCCCAGCTGAATGTGGGTGCCTCTGGGAACTTGGCAAAGGAGGCAGCTGCGATTGGAGCATTTCTCATCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS CCA 72 bp | ATGGTGTCCTCTGGCCAATGCCCAACGTCTCCAATTTaGAGCAATCGAGCTGAGCATTTTTGGGGCGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: MVSSGQCPTSPI*SNRAEHFWGAV Trigger: CACAGCGCCCCAAAAATGCTCAGCTCGATTGCTCCAAATTGGAGACGTTGGGCATTGGCCAGAGGACACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS TCA 72 bp | CCAATGCCCAACGTCTCCAATTTGGAGCAATCGAGCTaGGCATTTTTGGGGCGCTGTGCTCCTATGACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PMPNVSNLEQSS*AFLGRCAPMTG Trigger: TCCTGTCATAGGAGCACAGCGCCCCAAAAATGCTCAGCTCGATTGCTCCAAATTGGAGACGTTGGGCATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS CAA 90 bp | GTCTGTCTCCATCTCTTGTCGATGAGGAAAGGCCAGAGAGATTCTTaGATTCCAGTTCGAAATGGTGTCCTCTGGCCAATGCCCAACGTC | + |
|
Preference number: 6 (lower is better) Translates to: VCLHLLSMRKGQRDS*IPVRNGVLWPMPNV Trigger: GACGTTGGGCATTGGCCAGAGGACACCATTTCGAACTGGAATCAAAGAATCTCTCTGGCCTTTCCTCATCGACAAGAGATGGAGACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS GCA 72 bp | TTGCTCTTCGAAAGCCACAGCCAACGGTGTGCCAGTTaGTCTGCTGAAACTCTTTGTAAACTGCTCTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLFESHSQRCAS*SAETLCKLLCQ Trigger: TTGGCAGAGCAGTTTACAAAGAGTTTCAGCAGAGCAACTGGCACACCGTTGGCTGTGGCTTTCGAAGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
||
| CDS CCA 72 bp | GCTCCTATGACAGGACTGTCAGTAATAGGTCTTAAGTaGCTGCTGGGGAGGTTGAAGGCATCTGCAATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: APMTGLSVIGLK*LLGRLKASAIA Trigger: TGCAATTGCAGATGCCTTCAACCTCCCCAGCAGCCACTTAAGACCTATTACTGACAGTCCTGTCATAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
||
| CDS CAA 90 bp | GAACAGCTTCAGAATCCAACAGGTTCACTTGTTCGAATTTTGGTCTaGCTCTTCGAAAGCCACAGCCAACGGTGTGCCAGTTGCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EQLQNPTGSLVRILV*LFESHSQRCASCSA Trigger: AGCAGAGCAACTGGCACACCGTTGGCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGAACCTGTTGGATTCTGAAGCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
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| CDS CAA 90 bp | GGTGATGAACAGCTTCAGAATCCAACAGGTTCACTTGTTCGAATTTaGGTCTTGCTCTTCGAAAGCCACAGCCAACGGTGTGCCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: GDEQLQNPTGSLVRI*VLLFESHSQRCASC Trigger: GCAACTGGCACACCGTTGGCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGAACCTGTTGGATTCTGAAGCTGTTCATCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
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| CDS CAA 72 bp | CAGAATCCAACAGGTTCACTTGTTCGAATTTTGGTCTaGCTCTTCGAAAGCCACAGCCAACGGTGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: QNPTGSLVRILV*LFESHSQRCAS Trigger: ACTGGCACACCGTTGGCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGAACCTGTTGGATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
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| CDS CAA 90 bp | ATGACAGGACTGTCAGTAATAGGTCTTAAGTGGCTGCTGGGGAGGTaGAAGGCATCTGCAATTGCACACGCCATTTCATACTTGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: MTGLSVIGLKWLLGR*KASAIAHAISYLVI Trigger: GATGACCAAGTATGAAATGGCGTGTGCAATTGCAGATGCCTTCAACCTCCCCAGCAGCCACTTAAGACCTATTACTGACAGTCCTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS GCA 72 bp | AGAATCCAACAGGTTCACTTGTTCGAATTTTGGTCTTaGTCTTCGAAAGCCACAGCCAACGGTGTGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: RIQQVHLFEFWS*SSKATANGVPV Trigger: AACTGGCACACCGTTGGCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGAACCTGTTGGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
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| CDS GCA 72 bp | ATCTGGCTGACTCTCAACAACATCAGGTCTTCTCTCTaGAGCACAATGCACTATGACATGAGGCTGGAAATC | + |
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Preference number: 6 (lower is better) Translates to: IWLTLNNIRSSL*STMHYDMRLEI Trigger: GATTTCCAGCCTCATGTCATAGTGCATTGTGCTGCAGAGAGAAGACCTGATGTTGTTGAGAGTCAGCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS CCA 72 bp | AGCTTCAGAATCCAACAGGTTCACTTGTTCGAATTTTaGTCTTGCTCTTCGAAAGCCACAGCCAACGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SFRIQQVHLFEF*SCSSKATANGV Trigger: CACACCGTTGGCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGAACCTGTTGGATTCTGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
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| CDS CCA 72 bp | AGAGATTCTTTGATTCCAGTTCGAAATGGTGTCCTCTaGCCAATGCCCAACGTCTCCAATTTGGAGCAATCG | + |
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Preference number: 6 (lower is better) Translates to: RDSLIPVRNGVL*PMPNVSNLEQS Trigger: CGATTGCTCCAAATTGGAGACGTTGGGCATTGGCCAGAGGACACCATTTCGAACTGGAATCAAAGAATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 |
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| CDS CAA 72 bp | CAGCTTCAGAATCCAACAGGTTCACTTGTTCGAATTTaGGTCTTGCTCTTCGAAAGCCACAGCCAACGGTGT | + |
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Preference number: 6 (lower is better) Translates to: QLQNPTGSLVRI*VLLFESHSQRC Trigger: ACACCGTTGGCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGAACCTGTTGGATTCTGAAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
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| CDS CAA 90 bp | ATCATGAATGAGGTGATGAACAGCTTCAGAATCCAACAGGTTCACTaGTTCGAATTTTGGTCTTGCTCTTCGAAAGCCACAGCCAACGGT | + |
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Preference number: 6 (lower is better) Translates to: IMNEVMNSFRIQQVH*FEFWSCSSKATANG Trigger: ACCGTTGGCTGTGGCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGAACCTGTTGGATTCTGAAGCTGTTCATCACCTCATTCATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
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| CDS CAA 72 bp | GAGGTGATGAACAGCTTCAGAATCCAACAGGTTCACTaGTTCGAATTTTGGTCTTGCTCTTCGAAAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: EVMNSFRIQQVH*FEFWSCSSKAT Trigger: TGTGGCTTTCGAAGAGCAAGACCAAAATTCGAACAAGTGAACCTGTTGGATTCTGAAGCTGTTCATCACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040167.11 ENSMUST00000101347.10 ENSMUST00000141830.8 |
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