Pregenerated sensors for MASTL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026779Ensembl transcript IDs: ENSMUST00000028119.7
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCCCACTGTGTGGTTCCTGGAGACTGAACTCAGGTGGCTGAGATaGTTAGCAGGCACCCTTAAGCCACTTGCTGGCCCTAGTTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: SPTVWFLETELRWLR*LAGTLKPLAGPSSC Trigger: ACAAGAACTAGGGCCAGCAAGTGGCTTAAGGGTGCCTGCTAACCATCTCAGCCACCTGAGTTCAGTCTCCAGGAACCACACAGTGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR CAA 90 bp | AGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCAGCTCACCATaGTCTCTAACTCCAGCTCCAGGAGTTCTGACATCTTCACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: RGPGFNSQHPQGSSP*SLTPAPGVLTSSQV Trigger: TACTTGTGAAGATGTCAGAACTCCTGGAGCTGGAGTTAGAGACAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGGAGCATTCAAGGCAGTaGGACTCCATCACTAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: ADNLVYRTTRAIQRNPVLEHSRQ*DSITSK Trigger: CTTACTAGTGATGGAGTCTCACTGCCTTGAATGCTC...CAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR TCA 90 bp | TATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCTGTTGCATCTGCTCCTaGTCATGGGGACCTCCACCA | + |
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Preference number: 2 (lower is better) Translates to: YRTTRAIQRNPVLKNKERCCICS*SWGPPP Trigger: TGGTGGAGGTCCCCATGATCAGGAGCAGATGCAACA...GCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR TCA 90 bp | TACCTAATCCTTCCTAAACAGTTCCACCAACCAGGGACCAAGTATTCAAACCTGATAGGCCAGGACTCTTaGACCCCAGGTTGTTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: YLILPKQFHQPGTKYSNLIGQDS*TPGCFL Trigger: TAAGAAACAACCTGGGGTTCAAGAGTCCTGGCCTAT...CAGGTTTGAATACTTGGTCCCTGGTTGGTGGAACTGTTTAGGAAGGATTAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCTCACCATTGTCTCTAACTCCAGCTCCAGGAGTTCTGACATCTTCACAAAGCACATTGTTTCCCTaGTTATTCAGCCATCCATTT | + |
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Preference number: 2 (lower is better) Translates to: GSSPLSLTPAPGVLTSSQSTLFP*LFSHPF Trigger: AAATGGATGGCTGAATAAGCAGGGAAACAATGTGCT...TTGTGAAGATGTCAGAACTCCTGGAGCTGGAGTTAGAGACAATGGTGAGCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGTCTCATATGACAGCCTaGAGAACAGCTTTGCATGTA | + |
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Preference number: 2 (lower is better) Translates to: ADNLVYRTTRAIQRNPVLSHMTA*RTALHV Trigger: TACATGCAAAGCTGTTCTTCAGGCTGTCATATGAGA...CAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGCATGTTTGTCTCATATaGCAGCCTGAAGAACAGCTT | + |
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Preference number: 2 (lower is better) Translates to: ADNLVYRTTRAIQRNPVLHVCLI*QPEEQL Trigger: AAGCTGTTCTTCAGGCTGTCATATGAGACAAACATG...CAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR GCA 90 bp | GCACTGGTTATTTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCACAGGCAAAACACCAGTaGACATTAACAAACAAACAT | + |
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Preference number: 2 (lower is better) Translates to: ALVISPEDLGSIPNIHKAQAKHQ*TLTNKH Trigger: ATGTTTGTTTGTTAATGTGCACTGGTGTTTTGCCTG...TGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAAATAACCAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGCATGTCTGGTTCACATaGTTTTCAGTCATGTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: ADNLVYRTTRAIQRNPVLHVWFT*FSVMFV Trigger: GACAAACATGACTGAAAATCATGTGAACCAGACATG...CAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR GCA 90 bp | GCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGTGCTCACTTTTAACCTaGCCACATCATTTCAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: ADNLVYRTTRAIQRNPVLCSLLT*PHHFSL Trigger: CAAACTGAAATGATGTGGGCAGGTTAAAAGTGAGCA...CAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR CCA 90 bp | TTCAATTCCCAACATCCACAAGGCAGCTCACCATTGTCTCTAACTCCAGCTCCACACATCATTTCAGTTTaGCACTACAATCATTTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: FNSQHPQGSSPLSLTPAPHIISV*HYNHLA Trigger: GGCTAAATGATTGTAGTGCCAAACTGAAATGATGTG...TGGAGCTGGAGTTAGAGACAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR TCA 90 bp | CCCTTAAGCCACTTGCTGGCCCTAGTTCTTGTTTTACTACTAATTCATGCATATCCATCACTAGTAAGGTaGGCTGGAACCTTAGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PLSHLLALVLVLLLIHAYPSLVR*AGTLVL Trigger: AAGAACTAAGGTTCCAGCTCACCTTACTAGTGATGG...ATATGCATGAATTAGTAGTAAAACAAGAACTAGGGCCAGCAAGTGGCTTAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGGCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTGTTTTGAAACTTCAATaGTCACCTACAATGACATAC | + |
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Preference number: 2 (lower is better) Translates to: QEADNLVYRTTRAIQRNPVLKLQ*SPTMTY Trigger: GTATGTCATTGTAGGTGAGCATTGAAGTTTCAAAAC...AGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGCCTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR CCA 90 bp | ATCTTAGTGCTCACTTTTAACCTGCCCACATCATTTCAGTTTGGCACTACAATCTTAATGAAAGCACTATaGCCAGTATCACAAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: ILVLTFNLPTSFQFGTTILMKAL*PVSQGH Trigger: ATGCCCTTGTGATACTGGCCATAGTGCTTTCATTAA...GATTGTAGTGCCAAACTGAAATGATGTGGGCAGGTTAAAAGTGAGCACTAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR CCA 72 bp | GTGTGGTTCCTGGAGACTGAACTCAGGTGGCTGAGATaGTTAGCAGGCACCCTTAAGCCACTTGCTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: VWFLETELRWLR*LAGTLKPLAGP Trigger: AGGGCCAGCAAGTGGCTTAAGGGTGCCTGCTAACCATCTCAGCCACCTGAGTTCAGTCTCCAGGAACCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR CAA 90 bp | GCACTGGTTATTTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCAGCCTTAGTCTTCAAGTaGCAGACATACTCCTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ALVISPEDLGSIPNIHKAALVFK*QTYSCV Trigger: AACACAGGAGTATGTCTGCAACTTGAAGACTAAGGC...TGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAAATAACCAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR TCA 72 bp | AGGAATTGTAGAGGGGAACAAGAGCATTCAAGGCAGTaGGACTCCATCACTAGTAAGGTGAGCTGGAACCTT | + |
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Preference number: 3 (lower is better) Translates to: RNCRGEQEHSRQ*DSITSKVSWNL Trigger: AAGGTTCCAGCTCACCTTACTAGTGATGGAGTCTCACTGCCTTGAATGCTCTTGTTCCCCTCTACAATTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR-3UTR CAA 90 bp | ACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCACGAAGTTGCACACTAAGCAATaGCTACCTCCAGCCTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: TTRAIQRNPVLKNKERTKLHTKQ*LPPASS Trigger: GCTGGAGGCTGGAGGTAGCAATTGCTTAGTGTGCAA...CTTCGTGCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR TCA 72 bp | AGCATTCAAGGCAGTGAGACTCCATCACTAGTAAGGTaGGCTGGAACCTTAGTTCTTTTGACTAGTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: SIQGSETPSLVR*AGTLVLLTSPH Trigger: GTGTGGACTAGTCAAAAGAACTAAGGTTCCAGCTCACCTTACTAGTGATGGAGTCTCACTGCCTTGAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR CCA 72 bp | TATTTGCAGCACTCCAGACTCAAGAGGCAGACAATCTaGTCTATAGGACAACCAGGGCTATACAAAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: YLQHSRLKRQTI*SIGQPGLYKET Trigger: GGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGCCTCTTGAGTCTGGAGTGCTGCAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR GCA 72 bp | CCAGGCAAAACACCAGTGCACATTAACAAACAAACATaGCAGGCAGGGATAGTGCATACTATTATTTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PGKTPVHINKQT*QAGIVHTIICS Trigger: GCTGCAAATAATAGTATGCACTATCCCTGCCTGGCATGTTTGTTTGTTAATGTGCACTGGTGTTTTGCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| 3UTR TCA 72 bp | CCCTGCTTATTCAGCCATCCATTTACAATACTTTTCTaGCTATGTCAGTTCTATATTCATGTAGACCCCGGC | + |
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Preference number: 3 (lower is better) Translates to: PCLFSHPFTILF*LCQFYIHVDPG Trigger: GCCGGGGTCTACATGAATATAGAACTGACATAGTCAGAAAAGTATTGTAAATGGATGGCTGAATAAGCAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR TCA 90 bp | TCCTGTGTTGCATCTGCTCCTGATCATGGGGACCTCCACCATCATGTCTGGTTCTGGGCTTCACTATGGTaGACTCCTCAATGGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SCVASAPDHGDLHHHVWFWASLW*TPQWRV Trigger: CACCCTCCATTGAGGAGTTCACCATAGTGAAGCCCA...GAACCAGACATGATGGTGGAGGTCCCCATGATCAGGAGCAGATGCAACACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CCA 90 bp | TTCAATTCCCAACATCCACAAGGCAGCTCACCATTGTCTCTAACTCCAGCTCCATCGCCCGTCATCTACTaGGGCTGCCCCTCTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: FNSQHPQGSSPLSLTPAPSPVIY*GCPSSH Trigger: GTGAGAAGAGGGGCAGCCCCAGTAGATGACGGGCGA...TGGAGCTGGAGTTAGAGACAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR TCA 90 bp | TCCTGTGTTGCATCTGCTCCTGATCATGGGGACCTCCACCATCATGTCTGGTTCACGAAAGGCATAGTCTaGTGCTGCAGATTTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SCVASAPDHGDLHHHVWFTKGIV*CCRFSQ Trigger: CTGGGAAAATCTGCAGCATCAGACTATGCCTTTCGT...GAACCAGACATGATGGTGGAGGTCCCCATGATCAGGAGCAGATGCAACACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR GCA 90 bp | TTCAATTCCCAACATCCACAAGGCAGCTCACCATTGTCTCTAACTCCAGCTCCAAGGGCTTTTGCTCAGTaGCAGGGCATCTCTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FNSQHPQGSSPLSLTPAPRAFAQ*QGISLS Trigger: GCTGAGAGAGATGCCCTGGCACTGAGCAAAAGCCCT...TGGAGCTGGAGTTAGAGACAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CCA 90 bp | GCACTGGTTATTTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCAGTTTCGTCGTCTGGTTaGGGTACGAAAGGCATAGTC | + |
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Preference number: 4 (lower is better) Translates to: ALVISPEDLGSIPNIHKAVSSSG*GTKGIV Trigger: GACTATGCCTTTCGTACCCCAACCAGACGACGAAAC...TGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAAATAACCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR TCA 90 bp | TTCAAGTTGCAGACATACTCCTGTGTTGCATCTGCTCCTGATCATGGGGACCTCCCCAGTCCACTTCACTaGAGAGAGGATGCTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: FKLQTYSCVASAPDHGDLPSPLH*REDAVL Trigger: TAAAACAGCATCCTCTCTTCAGTGAAGTGGACTGGG...GAGGTCCCCATGATCAGGAGCAGATGCAACACAGGAGTATGTCTGCAACTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR GCA 90 bp | TTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCAGCTCACCATTGGGCAGTCCTTTTTACTaGTCAGCTCACAGTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: FSRGPGFNSQHPQGSSPLGSPFY*SAHSLH Trigger: ATGAAGACTGTGAGCTGAGCAGTAAAAAGGACTGCC...CAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CCA 90 bp | TTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCAGCTCACCATTGAGTCTCTTTCCCATTTaGGATTGCTGTGGCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: FSRGPGFNSQHPQGSSPLSLFPI*DCCGIL Trigger: CAGAATGCCACAGCAATCCCAAATGGGAAAGAGACT...CAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR TCA 90 bp | TTCAATTCCCAACATCCACAAGGCAGCTCACCATTGTCTCTAACTCCAGCTCCAAGCAGACTTAGGGGCTaGAAACATGTTTGCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: FNSQHPQGSSPLSLTPAPSRLRG*KHVCRV Trigger: GACTCTGCAAACATGTTTTCAGCCCCTAAGTCTGCT...TGGAGCTGGAGTTAGAGACAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR TCA 90 bp | TTCAAGTTGCAGACATACTCCTGTGTTGCATCTGCTCCTGATCATGGGGACCTCATTTGGAGTCTGATGTaGCGTGTAGTGCCTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: FKLQTYSCVASAPDHGDLIWSLM*RVVPSF Trigger: AAAGGAAGGCACTACACGTCACATCAGACTCCAAAT...GAGGTCCCCATGATCAGGAGCAGATGCAACACAGGAGTATGTCTGCAACTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR TCA 90 bp | TTCAAGTTGCAGACATACTCCTGTGTTGCATCTGCTCCTGATCATGGGGACCTCGTGGTGTTTCATCATTaGAAGGGGGAATTCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: FKLQTYSCVASAPDHGDLVVFHH*KGEFLS Trigger: TGACAGGAATTCCCCCTTTCAATGATGAAACACCAC...GAGGTCCCCATGATCAGGAGCAGATGCAACACAGGAGTATGTCTGCAACTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR GCA 90 bp | CAAGAGGCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTGTACACTTTCCCGAATaGACCACGGCTAATGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QEADNLVYRTTRAIQRNPVHFPE*TTANGL Trigger: AAGCCCATTAGCCGTGGTGCATTCGGGAAAGTGTAC...AGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGCCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR GCA 90 bp | TTCAAGTTGCAGACATACTCCTGTGTTGCATCTGCTCCTGATCATGGGGACCTCTTTCCCATTTGGGATTaGTGTGGCATTCTGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: FKLQTYSCVASAPDHGDLFPIWD*CGILTP Trigger: TGGAGTCAGAATGCCACAGCAATCCCAAATGGGAAA...GAGGTCCCCATGATCAGGAGCAGATGCAACACAGGAGTATGTCTGCAACTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR GCA 90 bp | TACCTAATCCTTCCTAAACAGTTCCACCAACCAGGGACCAAGTATTCAAACCTGGTCATCTACTGGGGCTaGCCCTCTTCTCACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: YLILPKQFHQPGTKYSNLVIYWG*PSSHTL Trigger: AAGAGTGTGAGAAGAGGGGCAGCCCCAGTAGATGAC...CAGGTTTGAATACTTGGTCCCTGGTTGGTGGAACTGTTTAGGAAGGATTAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CCA 90 bp | CCATTTAAAGAAGCAGGAATTGTAGAGGGGAACAAGAGCATTCAAGGCAGTGAGTCTACTGCAGGACCATaGGCTGTACCCAGTAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PFKEAGIVEGNKSIQGSESTAGP*AVPSKS Trigger: GCTCTTACTGGGTACAGCCCATGGTCCTGCAGTAGA...CTCACTGCCTTGAATGCTCTTGTTCCCCTCTACAATTCCTGCTTCTTTAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR TCA 90 bp | TACCTAATCCTTCCTAAACAGTTCCACCAACCAGGGACCAAGTATTCAAACCTGCACAGCCATGGGGTATaGACCACTGTAATCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: YLILPKQFHQPGTKYSNLHSHGV*TTVITG Trigger: TCCTGTGATTACAGTGGTTCATACCCCATGGCTGTG...CAGGTTTGAATACTTGGTCCCTGGTTGGTGGAACTGTTTAGGAAGGATTAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CCA 90 bp | GGCAGCTCACCATTGTCTCTAACTCCAGCTCCAGGAGTTCTGACATCTTCACAACTTGCCTTTCCTTATTaGCCTCATACTCTGTACAGT | + |
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Preference number: 4 (lower is better) Translates to: GSSPLSLTPAPGVLTSSQLAFPY*PHTLYS Trigger: ACTGTACAGAGTATGAGGCCAATAAGGAAAGGCAAG...TTGTGAAGATGTCAGAACTCCTGGAGCTGGAGTTAGAGACAATGGTGAGCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR TCA 90 bp | CCATTTAAAGAAGCAGGAATTGTAGAGGGGAACAAGAGCATTCAAGGCAGTGAGATTGCTGTGGCATTCTaGCTCCACACTGGATACGAA | + |
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Preference number: 4 (lower is better) Translates to: PFKEAGIVEGNKSIQGSEIAVAF*LHTGYE Trigger: TTCGTATCCAGTGTGGAGTCAGAATGCCACAGCAAT...CTCACTGCCTTGAATGCTCTTGTTCCCCTCTACAATTCCTGCTTCTTTAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR GCA 90 bp | TTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCAGCTCACCATTGTCACTGAAGAGAGGATaGTGTTTTAGTTCTCTCATT | + |
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Preference number: 4 (lower is better) Translates to: FSRGPGFNSQHPQGSSPLSLKRG*CFSSLI Trigger: AATGAGAGAACTAAAACAGCATCCTCTCTTCAGTGA...CAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CCA 90 bp | TATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCCTCCTCAATGGAGGGTaGTCTTGGTACCGGGATCCT | + |
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Preference number: 4 (lower is better) Translates to: YRTTRAIQRNPVLKNKERLLNGG*SWYRDP Trigger: AGGATCCCGGTACCAAGACCACCCTCCATTGAGGAG...GCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CCA 90 bp | TTCAAGTTGCAGACATACTCCTGTGTTGCATCTGCTCCTGATCATGGGGACCTCCAATGTTCTCCTTATTaGCATAGTCAAGTTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: FKLQTYSCVASAPDHGDLQCSPY*HSQVAD Trigger: GTCAGCAACTTGACTATGCCAATAAGGAGAACATTG...GAGGTCCCCATGATCAGGAGCAGATGCAACACAGGAGTATGTCTGCAACTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR TCA 90 bp | GGCAGCTCACCATTGTCTCTAACTCCAGCTCCAGGAGTTCTGACATCTTCACAATCTGTCAGTTTAATATaGCCCTCATTGGAAATAAGC | + |
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Preference number: 4 (lower is better) Translates to: GSSPLSLTPAPGVLTSSQSVSLI*PSLEIS Trigger: GCTTATTTCCAATGAGGGTCATATTAAACTGACAGA...TTGTGAAGATGTCAGAACTCCTGGAGCTGGAGTTAGAGACAATGGTGAGCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR TCA 90 bp | TACCTAATCCTTCCTAAACAGTTCCACCAACCAGGGACCAAGTATTCAAACCTGATGGCACTGCTGTCATaGATGGGAGAAAGTGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: YLILPKQFHQPGTKYSNLMALLS*MGESAN Trigger: ATTAGCACTTTCTCCCATTCATGACAGCAGTGCCAT...CAGGTTTGAATACTTGGTCCCTGGTTGGTGGAACTGTTTAGGAAGGATTAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR GCA 90 bp | TTCAATTCCCAACATCCACAAGGCAGCTCACCATTGTCTCTAACTCCAGCTCCAGGCACTTGTAGATTTTaGATACAGCATTTCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FNSQHPQGSSPLSLTPAPGTCRF*IQHFNC Trigger: GCAGTTGAAATGCTGTATGCAAAATCTACAAGTGCC...TGGAGCTGGAGTTAGAGACAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTCACTGCTGTCATGAATaGGAGAAAGTGCTAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QEADNLVYRTTRAIQRNPHCCHE*EKVLIP Trigger: TGGAATTAGCACTTTCTCCCATTCATGACAGCAGTG...AGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGCCTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTAAGCCACTTGCTGGCCCTAGTTCTTGTTTTACTACTAATTCATGCATATTTCCAGCAGCAGGAATaGCACTGCTGTCATGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSHLLALVLVLLLIHAYFQQQE*HCCHEW Trigger: CCATTCATGACAGCAGTGCCATTCCTGCTGCTGGAA...ATATGCATGAATTAGTAGTAAAACAAGAACTAGGGCCAGCAAGTGGCTTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTTGCAGACATACTCCTGTGTTGCATCTGCTCCTGATCATGGGGACCTCCTGGAATACTTGTTGTaGTGTTTCATCATTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKLQTYSCVASAPDHGDLLEYLL*CFIIER Trigger: CCTTTCAATGATGAAACACCACAACAAGTATTCCAG...GAGGTCCCCATGATCAGGAGCAGATGCAACACAGGAGTATGTCTGCAACTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR TCA 90 bp | TTCAATTCCCAACATCCACAAGGCAGCTCACCATTGTCTCTAACTCCAGCTCCACTAAAGAAGTTATGCTaGTTTTGGATGGTTCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FNSQHPQGSSPLSLTPAPLKKLC*FWMVPN Trigger: ATTCGGAACCATCCAAAATCAGCATAACTTCTTTAG...TGGAGCTGGAGTTAGAGACAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTGATATGGTCAGATGTTaGGCATTATTTCTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEADNLVYRTTRAIQRNPDMVRC*ALFLAS Trigger: TGAAGCCAGAAATAATGCTCAACATCTGACCATATC...AGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGCCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR GCA 90 bp | TATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCCAACAAAAGGGCTTTTaGTCAGTGCCAGGGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRTTRAIQRNPVLKNKERQQKGF*SVPGHL Trigger: GAGATGCCCTGGCACTGAGCAAAAGCCCTTTTGTTG...GCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | TACCTAATCCTTCCTAAACAGTTCCACCAACCAGGGACCAAGTATTCAAACCTGATGGCAGTCATCTTGTaGCAAGGAATTTTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YLILPKQFHQPGTKYSNLMAVIL*QGIFLA Trigger: TGCCAAGAAAATTCCTTGCCACAAGATGACTGCCAT...CAGGTTTGAATACTTGGTCCCTGGTTGGTGGAACTGTTTAGGAAGGATTAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR TCA 90 bp | CCCTTAAGCCACTTGCTGGCCCTAGTTCTTGTTTTACTACTAATTCATGCATATCTTTGCATAATTTCCTaGCAAGGACTGGAGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: PLSHLLALVLVLLLIHAYLCIIS*QGLEST Trigger: GGTTGACTCCAGTCCTTGTCAGGAAATTATGCAAAG...ATATGCATGAATTAGTAGTAAAACAAGAACTAGGGCCAGCAAGTGGCTTAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR GCA 90 bp | GCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGATGATTTTAGCAGTTTaGTCGAATAAGAAGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ADNLVYRTTRAIQRNPVLMILAV*SNKKSA Trigger: AGCCGACTTCTTATTCGAGCAAACTGCTAAAATCAT...CAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR GCA 90 bp | CCCTTAAGCCACTTGCTGGCCCTAGTTCTTGTTTTACTACTAATTCATGCATATATTATCTGGGTCCCTTaGTTCCCAAGAGATTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSHLLALVLVLLLIHAYIIWVP*FPRDFP Trigger: AGGGAAATCTCTTGGGAAGCAAGGGACCCAGATAAT...ATATGCATGAATTAGTAGTAAAACAAGAACTAGGGCCAGCAAGTGGCTTAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | TTCAATTCCCAACATCCACAAGGCAGCTCACCATTGTCTCTAACTCCAGCTCCAATCTTTTTCTCCAACTaGTGTGAAAAATCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FNSQHPQGSSPLSLTPAPIFFSN*CEKSQR Trigger: TCTTTGGGATTTTTCACACCAGTTGGAGAAAAAGAT...TGGAGCTGGAGTTAGAGACAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR GCA 90 bp | GCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGTTTATTGATCATGTCTaGCTTTTTGACAACCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ADNLVYRTTRAIQRNPVLFIDHV*LFDNLH Trigger: GTGAAGGTTGTCAAAAAGGCAGACATGATCAATAAA...CAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTAAGCCACTTGCTGGCCCTAGTTCTTGTTTTACTACTAATTCATGCATATGGTTTCAAATCCCTATaGATGATTCCATGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSHLLALVLVLLLIHAYGFKSL*MIPCLC Trigger: GCACAGACATGGAATCATCCATAGGGATTTGAAACC...ATATGCATGAATTAGTAGTAAAACAAGAACTAGGGCCAGCAAGTGGCTTAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | TACCTAATCCTTCCTAAACAGTTCCACCAACCAGGGACCAAGTATTCAAACCTGCAGGTATTTCTGGATTaGATGAAAGGGTTTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLILPKQFHQPGTKYSNLQVFLD*MKGFQN Trigger: GTTTTGAAACCCTTTCATCCAATCCAGAAATACCTG...CAGGTTTGAATACTTGGTCCCTGGTTGGTGGAACTGTTTAGGAAGGATTAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTAAGCCACTTGCTGGCCCTAGTTCTTGTTTTACTACTAATTCATGCATATTTTCCTGACAAGGACTaGAGTCAACCAAGTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLSHLLALVLVLLLIHAYFPDKD*SQPSGN Trigger: ATTTCCACTTGGTTGACTCCAGTCCTTGTCAGGAAA...ATATGCATGAATTAGTAGTAAAACAAGAACTAGGGCCAGCAAGTGGCTTAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR GCA 90 bp | CCCTTAAGCCACTTGCTGGCCCTAGTTCTTGTTTTACTACTAATTCATGCATATATACAGCATTTCAACTaGATTCCAGCTCATTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLSHLLALVLVLLLIHAYIQHFN*IPAHCT Trigger: TGTGCAATGAGCTGGAATGCAGTTGAAATGCTGTAT...ATATGCATGAATTAGTAGTAAAACAAGAACTAGGGCCAGCAAGTGGCTTAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | ACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCACGAAGACTGTCCCTTGTCAATaGTCATGTTCTCATTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTRAIQRNPVLKNKERTKTVPCQ*SCSHYL Trigger: CAGATAATGAGAACATGACCATTGACAAGGGACAGT...CTTCGTGCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | TACCTAATCCTTCCTAAACAGTTCCACCAACCAGGGACCAAGTATTCAAACCTGGGCAAGGAATTTTCTTaGCATTTTGGTAACACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLILPKQFHQPGTKYSNLGKEFS*HFGNTN Trigger: ATTTGTGTTACCAAAATGCCAAGAAAATTCCTTGCC...CAGGTTTGAATACTTGGTCCCTGGTTGGTGGAACTGTTTAGGAAGGATTAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR TCA 90 bp | ACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCACGAAGTGTCAGTTAAATAGGTaGCAATGTTCTCCTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTRAIQRNPVLKNKERTKCQLNR*QCSPYW Trigger: CCAATAAGGAGAACATTGTCACCTATTTAACTGACA...CTTCGTGCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR GCA 90 bp | TATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCGCTATCGTTGGTATATaGAGTTTTTCTGGGGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YRTTRAIQRNPVLKNKERAIVGI*SFSGVC Trigger: ACAAACCCCAGAAAAACTGCATATACCAACGATAGC...GCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTAAGCCACTTGCTGGCCCTAGTTCTTGTTTTACTACTAATTCATGCATATAGTCTTTTCCTACACTaGAGTAGATTAGAAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLSHLLALVLVLLLIHAYSLFLH*SRLEVR Trigger: TCTGACTTCTAATCTACTCCAGTGTAGGAAAAGACT...ATATGCATGAATTAGTAGTAAAACAAGAACTAGGGCCAGCAAGTGGCTTAAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| 3UTR CAA 72 bp | GTCTTCCTTCTCTTCTGTATCCTTACACATAGCACATaGTTTCCCTGCTTATTCAGCCATCCATTTACAATA | + |
|
Preference number: 4 (lower is better) Translates to: VFLLFCILTHST*FPCLFSHPFTI Trigger: TATTGTAAATGGATGGCTGAATAAGCAGGGAAACAATGTGCTATGTGTAAGGATACAGAAGAGAAGGAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR TCA 90 bp | TATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCATGTCCATTGCACTTTaGGCATTATCAGATAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YRTTRAIQRNPVLKNKERMSIAL*ALSDSF Trigger: AAAGCTATCTGATAATGCTCAAAGTGCAATGGACAT...GCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS CCA 90 bp | GCTAATGGGCTTCACTATGGTGAACTCCTCAATGGAGGGTGGTCTTaGTACCGGGATCCTACTCACGCACTCCTCTATCGCCGCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ANGLHYGELLNGGWS*YRDPTHALLYRRTS Trigger: GGAGGTGCGGCGATAGAGGAGTGCGTGAGTAGGATCCCGGTACCAAGACCACCCTCCATTGAGGAGTTCACCATAGTGAAGCCCATTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS CCA 90 bp | ACCACGGCTAATGGGCTTCACTATGGTGAACTCCTCAATGGAGGGTaGTCTTGGTACCGGGATCCTACTCACGCACTCCTCTATCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TTANGLHYGELLNGG*SWYRDPTHALLYRR Trigger: GCGGCGATAGAGGAGTGCGTGAGTAGGATCCCGGTACCAAGACCACCCTCCATTGAGGAGTTCACCATAGTGAAGCCCATTAGCCGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS GCA 90 bp | TGCGTACAACTTGCCGCCTTTCTGTCCCAGGTACACTTTCCCGAATaGACCACGGCTAATGGGCTTCACTATGGTGAACTCCTCAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: CVQLAAFLSQVHFPE*TTANGLHYGELLNG Trigger: TCCATTGAGGAGTTCACCATAGTGAAGCCCATTAGCCGTGGTGCATTCGGGAAAGTGTACCTGGGACAGAAAGGCGGCAAGTTGTACGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | GGCAGCTCACCATTGTCTCTAACTCCAGCTCCAGGAGTTCTGACATCTTCACAATTCACTGCGTACAACTaGCCGCCTTTCTGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSPLSLTPAPGVLTSSQFTAYN*PPFCPR Trigger: CCTGGGACAGAAAGGCGGCAAGTTGTACGCAGTGAA...TTGTGAAGATGTCAGAACTCCTGGAGCTGGAGTTAGAGACAATGGTGAGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS CCA 90 bp | TCAACTGCATTCCAGCTCATTGCACAGCCTGATGATTCGGTACTCTaGCAGTCTCTTTCCCATTTGGGATTGCTGTGGCATTCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: STAFQLIAQPDDSVL*QSLSHLGLLWHSDS Trigger: GGAGTCAGAATGCCACAGCAATCCCAAATGGGAAAGAGACTGCCAGAGTACCGAATCATCAGGCTGTGCAATGAGCTGGAATGCAGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | TTCAATTCCCAACATCCACAAGGCAGCTCACCATTGTCTCTAACTCCAGCTCCACTGCATTCCAGCTCATaGCACAGCCTGATGATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FNSQHPQGSSPLSLTPAPLHSSS*HSLMIR Trigger: CCGAATCATCAGGCTGTGCAATGAGCTGGAATGCAG...TGGAGCTGGAGTTAGAGACAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | TTCAATTCCCAACATCCACAAGGCAGCTCACCATTGTCTCTAACTCCAGCTCCAATTTGCACGGCAGCCTaGCCTTTCCTTATTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FNSQHPQGSSPLSLTPAPICTAA*PFLIGL Trigger: GAGGCCAATAAGGAAAGGCAAGGCTGCCGTGCAAAT...TGGAGCTGGAGTTAGAGACAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS TCA 90 bp | GGTACTCTGGCAGTCTCTTTCCCATTTGGGATTGCTGTGGCATTCTaGCTCCACACTGGATACGAAGGTATGAGACTGGCTACTAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: GTLAVSFPFGIAVAF*LHTGYEGMRLATST Trigger: AGTACTAGTAGCCAGTCTCATACCTTCGTATCCAGTGTGGAGTCAGAATGCCACAGCAATCCCAAATGGGAAAGAGACTGCCAGAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS TCA 90 bp | CCTGATAGCTTCAGGTTCTGGACTTCGGTTGTCAAGCCTGTACTTTaGTTTGCACGGCAGCCTTGCCTTTCCTTATTGGCCTCATACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PDSFRFWTSVVKPVL*FARQPCLSLLASYS Trigger: AGAGTATGAGGCCAATAAGGAAAGGCAAGGCTGCCGTGCAAATCAAAGTACAGGCTTGACAACCGAAGTCCAGAACCTGAAGCTATCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS GCA 90 bp | AGCCTGATGATTCGGTACTCTGGCAGTCTCTTTCCCATTTGGGATTaGTGTGGCATTCTGACTCCACACTGGATACGAAGGTATGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: SLMIRYSGSLFPIWD*CGILTPHWIRRYET Trigger: AGTCTCATACCTTCGTATCCAGTGTGGAGTCAGAATGCCACAGCAATCCCAAATGGGAAAGAGACTGCCAGAGTACCGAATCATCAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS CCA 90 bp | TTGCACAGCCTGATGATTCGGTACTCTGGCAGTCTCTTTCCCATTTaGGATTGCTGTGGCATTCTGACTCCACACTGGATACGAAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LHSLMIRYSGSLFPI*DCCGILTPHWIRRY Trigger: ATACCTTCGTATCCAGTGTGGAGTCAGAATGCCACAGCAATCCCAAATGGGAAAGAGACTGCCAGAGTACCGAATCATCAGGCTGTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | GCACTGGTTATTTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCACAGTCTCTTTCCCATTaGGGATTGCTGTGGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALVISPEDLGSIPNIHKAQSLSH*GLLWHS Trigger: AGAATGCCACAGCAATCCCAAATGGGAAAGAGACTG...TGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAAATAACCAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | TTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCAGCTCACCATTGAGCATGGCAGTCATCTaGTGGCAAGGAATTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSRGPGFNSQHPQGSSPLSMAVI*WQGIFL Trigger: CAAGAAAATTCCTTGCCACAAGATGACTGCCATGCT...CAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS TCA 90 bp | TTGGGATTGCTGTGGCATTCTGACTCCACACTGGATACGAAGGTATaGGACTGGCTACTAGTACTTGAGGTACCCAGTCTTTTCCTACAC | + |
|
Preference number: 5 (lower is better) Translates to: LGLLWHSDSTLDTKV*DWLLVLEVPSLFLH Trigger: GTGTAGGAAAAGACTGGGTACCTCAAGTACTAGTAGCCAGTCTCATACCTTCGTATCCAGTGTGGAGTCAGAATGCCACAGCAATCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS TCA 90 bp | AGGGTCACCTGGTTGCTTCCAGCAGCAGGAATGGCACTGCTGTCATaGATGGGAGAAAGTGCTAATTCCAGTTCTGTTTTTGTCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RVTWLLPAAGMALLS*MGESANSSSVFVLM Trigger: CATCAAGACAAAAACAGAACTGGAATTAGCACTTTCTCCCATTCATGACAGCAGTGCCATTCCTGCTGCTGGAAGCAACCAGGTGACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS GCA 90 bp | AGACTGTCCCTTGTCAATGGTCATGTTCTCATTATCTGGGTCCCTTaGTTCCCAAGAGATTTCCCTGAAGCATTTTCTAGGGAGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLSLVNGHVLIIWVP*FPRDFPEAFSREGH Trigger: GTGACCCTCCCTAGAAAATGCTTCAGGGAAATCTCTTGGGAAGCAAGGGACCCAGATAATGAGAACATGACCATTGACAAGGGACAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | TCCTGTGTTGCATCTGCTCCTGATCATGGGGACCTCCACCATCATGTCTGGTTCGGGCTGAAAACATGTTaGCAGAGTCTTGATCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCVASAPDHGDLHHHVWFGLKTC*QSLDLF Trigger: AAAAAGATCAAGACTCTGCAAACATGTTTTCAGCCC...GAACCAGACATGATGGTGGAGGTCCCCATGATCAGGAGCAGATGCAACACAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTAGCCTGTACTTTGATTaGCACGGCAGCCTTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QEADNLVYRTTRAIQRNPSLYFD*HGSLAF Trigger: AAAGGCAAGGCTGCCGTGCAAATCAAAGTACAGGCT...AGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGCCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS TCA 90 bp | CCCCTCTTCTCACACTCTTTGGAGTTCTGTATGATGTTCCCAACTTaGCCTGATTTGGAGTCTGATGTGACGTGTAGTGCCTTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLFSHSLEFCMMFPT*PDLESDVTCSAFLS Trigger: AGAAAGGAAGGCACTACACGTCACATCAGACTCCAAATCAGGTCAAGTTGGGAACATCATACAGAACTCCAAAGAGTGTGAGAAGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | CCATTTAAAGAAGCAGGAATTGTAGAGGGGAACAAGAGCATTCAAGGCAGTGAGACAACAAAAGGGCTTTaGCTCAGTGCCAGGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PFKEAGIVEGNKSIQGSETTKGL*LSARAS Trigger: AGATGCCCTGGCACTGAGCAAAAGCCCTTTTGTTGT...CTCACTGCCTTGAATGCTCTTGTTCCCCTCTACAATTCCTGCTTCTTTAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | TTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCAGCTCACCATTGATATGTAGGAGAGACTaGACATCTCCACCAATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSRGPGFNSQHPQGSSPLICRRD*TSPPIR Trigger: TCTTATTGGTGGAGATGTCAAGTCTCTCCTACATAT...CAATGGTGAGCTGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | TACCTAATCCTTCCTAAACAGTTCCACCAACCAGGGACCAAGTATTCAAACCTGGGCATCTCTCTCAGCTaGTACCTGATGAGTCATATT | + |
|
Preference number: 5 (lower is better) Translates to: YLILPKQFHQPGTKYSNLGISLS*YLMSHI Trigger: AATATGACTCATCAGGTACAAGCTGAGAGAGATGCC...CAGGTTTGAATACTTGGTCCCTGGTTGGTGGAACTGTTTAGGAAGGATTAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS-3UTR CAA 90 bp | GCACTGGTTATTTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCATTGGAAATAAGCATATaGTCCGGTTTCAAATCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: ALVISPEDLGSIPNIHKALEISI*SGFKSL Trigger: TAGGGATTTGAAACCGGACAATATGCTTATTTCCAA...TGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAAATAACCAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CAA 90 bp | CCCTTAAGCCACTTGCTGGCCCTAGTTCTTGTTTTACTACTAATTCATGCATATCTTTCCCATTTGGGATaGCTGTGGCATTCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLSHLLALVLVLLLIHAYLSHLG*LWHSDS Trigger: GGAGTCAGAATGCCACAGCAATCCCAAATGGGAAAG...ATATGCATGAATTAGTAGTAAAACAAGAACTAGGGCCAGCAAGTGGCTTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CAA 90 bp | GCACTGGTTATTTCTCCAGAGGACCTGGGTTCAATTCCCAACATCCACAAGGCAGAAGTTATGCTGATTTaGGATGGTTCCGAATTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ALVISPEDLGSIPNIHKAEVMLI*DGSELV Trigger: TACTAATTCGGAACCATCCAAAATCAGCATAACTTC...TGCCTTGTGGATGTTGGGAATTGAACCCAGGTCCTCTGGAGAAATAACCAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CAA 90 bp | TATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCTGTTTCGTCGTCTGGTaGGGGTACGAAAGGCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: YRTTRAIQRNPVLKNKERCFVVW*GYERHS Trigger: ACTATGCCTTTCGTACCCCAACCAGACGACGAAACA...GCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CAA 90 bp | CAAGAGGCAGACAATCTGGTCTATAGGACAACCAGGGCTATACAAAGAAACCCTTTAAAAGCATGTCCATaGCACTTTGAGCATTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEADNLVYRTTRAIQRNPLKACP*HFEHYQ Trigger: CTGATAATGCTCAAAGTGCAATGGACATGCTTTTAA...AGGGTTTCTTTGTATAGCCCTGGTTGTCCTATAGACCAGATTGTCTGCCTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS TCA 90 bp | GCTCTCTTTGAATCATCAATGGTTAAAAGCATGTCCATTGCACTTTaGGCATTATCAGATAGCTTTTCTTCGCCTTCTGGCCATGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ALFESSMVKSMSIAL*ALSDSFSSPSGHGI Trigger: TATCCCATGGCCAGAAGGCGAAGAAAAGCTATCTGATAATGCTCAAAGTGCAATGGACATGCTTTTAACCATTGATGATTCAAAGAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CAA 90 bp | ACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCACGAAGTCAAGTAGATGTTGCTaGCTGACTGCAGTGAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: TTRAIQRNPVLKNKERTKSSRCC*LTAVSN Trigger: ATTACTCACTGCAGTCAGCAAGCAACATCTACTTGA...CTTCGTGCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 90 bp | TCTTGGATACAAGCATGGCAGTCATCTTGTGGCAAGGAATTTTCTTaGCATTTTGGTAACACAAATAGATCTTCAGTGTTTGGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWIQAWQSSCGKEFS*HFGNTNRSSVFGSS Trigger: TGAAGAACCAAACACTGAAGATCTATTTGTGTTACCAAAATGCCAAGAAAATTCCTTGCCACAAGATGACTGCCATGCTTGTATCCAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 90 bp | GATGCTGTTTTAGTTCTCTCATTCCAGCTCTCTTTGAATCATCAATaGTTAAAAGCATGTCCATTGCACTTTGAGCATTATCAGATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DAVLVLSFQLSLNHQ*LKACPLHFEHYQIA Trigger: AGCTATCTGATAATGCTCAAAGTGCAATGGACATGCTTTTAACCATTGATGATTCAAAGAGAGCTGGAATGAGAGAACTAAAACAGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS-3UTR CAA 90 bp | TATAGGACAACCAGGGCTATACAAAGAAACCCTGTCTTGAAAAATAAAGAACGCACAGGTATTTCTGGATaGGATGAAAGGGTTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YRTTRAIQRNPVLKNKERTGISG*DERVSK Trigger: TTTTGAAACCCTTTCATCCAATCCAGAAATACCTGT...GCGTTCTTTATTTTTCAAGACAGGGTTTCTTTGTATAGCCCTGGTTGTCCTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS GCA 72 bp | CTTGCCGCCTTTCTGTCCCAGGTACACTTTCCCGAATaGACCACGGCTAATGGGCTTCACTATGGTGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: LAAFLSQVHFPE*TTANGLHYGEL Trigger: GAGTTCACCATAGTGAAGCCCATTAGCCGTGGTGCATTCGGGAAAGTGTACCTGGGACAGAAAGGCGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 72 bp | CTTCACTATGGTGAACTCCTCAATGGAGGGTGGTCTTaGTACCGGGATCCTACTCACGCACTCCTCTATCGC | + |
|
Preference number: 6 (lower is better) Translates to: LHYGELLNGGWS*YRDPTHALLYR Trigger: GCGATAGAGGAGTGCGTGAGTAGGATCCCGGTACCAAGACCACCCTCCATTGAGGAGTTCACCATAGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 72 bp | AATGGGCTTCACTATGGTGAACTCCTCAATGGAGGGTaGTCTTGGTACCGGGATCCTACTCACGCACTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: NGLHYGELLNGG*SWYRDPTHALL Trigger: GAGGAGTGCGTGAGTAGGATCCCGGTACCAAGACCACCCTCCATTGAGGAGTTCACCATAGTGAAGCCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 72 bp | GAGATTTCCCTGAAGCATTTTCTAGGGAGGGTCACCTaGTTGCTTCCAGCAGCAGGAATGGCACTGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EISLKHFLGRVT*LLPAAGMALLS Trigger: TGACAGCAGTGCCATTCCTGCTGCTGGAAGCAACCAGGTGACCCTCCCTAGAAAATGCTTCAGGGAAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS GCA 72 bp | GGGTCACCTGGTTGCTTCCAGCAGCAGGAATGGCACTaGTGTCATGAATGGGAGAAAGTGCTAATTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GSPGCFQQQEWH*CHEWEKVLIPV Trigger: AACTGGAATTAGCACTTTCTCCCATTCATGACAGCAGTGCCATTCCTGCTGCTGGAAGCAACCAGGTGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS TCA 72 bp | TTCAGGTTCTGGACTTCGGTTGTCAAGCCTGTACTTTaGTTTGCACGGCAGCCTTGCCTTTCCTTATTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FRFWTSVVKPVL*FARQPCLSLLA Trigger: GGCCAATAAGGAAAGGCAAGGCTGCCGTGCAAATCAAAGTACAGGCTTGACAACCGAAGTCCAGAACCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS TCA 72 bp | GTTTCGTCGTCTGGTTGGGGTACGAAAGGCATAGTCTaGTGCTGCAGATTTTCCCAGTCCACTTCACTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSSSGWGTKGIV*CCRFSQSTSLK Trigger: CTTCAGTGAAGTGGACTGGGAAAATCTGCAGCATCAGACTATGCCTTTCGTACCCCAACCAGACGACGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS GCA 72 bp | ATTCGGTACTCTGGCAGTCTCTTTCCCATTTGGGATTaGTGTGGCATTCTGACTCCACACTGGATACGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRYSGSLFPIWD*CGILTPHWIRR Trigger: CCTTCGTATCCAGTGTGGAGTCAGAATGCCACAGCAATCCCAAATGGGAAAGAGACTGCCAGAGTACCGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 72 bp | GACTGGACTGACAGAAACCAGACTGTCCCTTGTCAATaGTCATGTTCTCATTATCTGGGTCCCTTGCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DWTDRNQTVPCQ*SCSHYLGPLLP Trigger: GGGAAGCAAGGGACCCAGATAATGAGAACATGACCATTGACAAGGGACAGTCTGGTTTCTGTCAGTCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CAA 72 bp | CCTGATGATTCGGTACTCTGGCAGTCTCTTTCCCATTaGGGATTGCTGTGGCATTCTGACTCCACACTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PDDSVLWQSLSH*GLLWHSDSTLD Trigger: ATCCAGTGTGGAGTCAGAATGCCACAGCAATCCCAAATGGGAAAGAGACTGCCAGAGTACCGAATCATCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CAA 72 bp | CTTCAGGTTCTGGACTTCGGTTGTCAAGCCTGTACTTaGATTTGCACGGCAGCCTTGCCTTTCCTTATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQVLDFGCQACT*ICTAALPFLIG Trigger: GCCAATAAGGAAAGGCAAGGCTGCCGTGCAAATCAAAGTACAGGCTTGACAACCGAAGTCCAGAACCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CAA 90 bp | ATTGCACAGCCTGATGATTCGGTACTCTGGCAGTCTCTTTCCCATTaGGGATTGCTGTGGCATTCTGACTCCACACTGGATACGAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: IAQPDDSVLWQSLSH*GLLWHSDSTLDTKV Trigger: TACCTTCGTATCCAGTGTGGAGTCAGAATGCCACAGCAATCCCAAATGGGAAAGAGACTGCCAGAGTACCGAATCATCAGGCTGTGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS TCA 72 bp | CTGTGGCATTCTGACTCCACACTGGATACGAAGGTATaGGACTGGCTACTAGTACTTGAGGTACCCAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LWHSDSTLDTKV*DWLLVLEVPSL Trigger: AAGACTGGGTACCTCAAGTACTAGTAGCCAGTCTCATACCTTCGTATCCAGTGTGGAGTCAGAATGCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS TCA 72 bp | CCTTCCTTTCTCAGTAGGGCTCACAGCCATGGGGTATaGACCACTGTAATCACAGGAAATGTCCATAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PSFLSRAHSHGV*TTVITGNVHSI Trigger: GATGCTATGGACATTTCCTGTGATTACAGTGGTTCATACCCCATGGCTGTGAGCCCTACTGAGAAAGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS TCA 72 bp | GGCTGCCCCTCTTCTCACACTCTTTGGAGTTCTGTATaGTGTTCCCAACTTGACCTGATTTGGAGTCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GCPSSHTLWSSV*CSQLDLIWSLM Trigger: CATCAGACTCCAAATCAGGTCAAGTTGGGAACATCATACAGAACTCCAAAGAGTGTGAGAAGAGGGGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 72 bp | CTGATGATTCGGTACTCTGGCAGTCTCTTTCCCATTTaGGATTGCTGTGGCATTCTGACTCCACACTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: LMIRYSGSLFPI*DCCGILTPHWI Trigger: TATCCAGTGTGGAGTCAGAATGCCACAGCAATCCCAAATGGGAAAGAGACTGCCAGAGTACCGAATCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CAA 72 bp | ATGTCTGCCTTTTTGACAACCTTCACTGCGTACAACTaGCCGCCTTTCTGTCCCAGGTACACTTTCCCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: MSAFLTTFTAYN*PPFCPRYTFPN Trigger: ATTCGGGAAAGTGTACCTGGGACAGAAAGGCGGCAAGTTGTACGCAGTGAAGGTTGTCAAAAAGGCAGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CAA 90 bp | ATAGCTTCAGGTTCTGGACTTCGGTTGTCAAGCCTGTACTTTGATTaGCACGGCAGCCTTGCCTTTCCTTATTGGCCTCATACTCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: IASGSGLRLSSLYFD*HGSLAFPYWPHTLY Trigger: GTACAGAGTATGAGGCCAATAAGGAAAGGCAAGGCTGCCGTGCAAATCAAAGTACAGGCTTGACAACCGAAGTCCAGAACCTGAAGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS GCA 72 bp | GTAATAGAGATGCACAACAAAAGGGCTTTTGCTCAGTaGCAGGGCATCTCTCTCAGCTTGTACCTGATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VIEMHNKRAFAQ*QGISLSLYLMS Trigger: ACTCATCAGGTACAAGCTGAGAGAGATGCCCTGGCACTGAGCAAAAGCCCTTTTGTTGTGCATCTCTATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 72 bp | AGACTGTCCCTTGTCAATGGTCATGTTCTCATTATCTaGGTCCCTTGCTTCCCAAGAGATTTCCCTGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLSLVNGHVLII*VPCFPRDFPEA Trigger: TGCTTCAGGGAAATCTCTTGGGAAGCAAGGGACCCAGATAATGAGAACATGACCATTGACAAGGGACAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 72 bp | TCTGGCTTCAAAATAGGATGTATCTGTTTCGTCGTCTaGTTGGGGTACGAAAGGCATAGTCTGATGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGFKIGCICFVV*LGYERHSLMLQ Trigger: CTGCAGCATCAGACTATGCCTTTCGTACCCCAACCAGACGACGAAACAGATACATCCTATTTTGAAGCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CAA 72 bp | GGTTGTCAAGCCTGTACTTTGATTTGCACGGCAGCCTaGCCTTTCCTTATTGGCCTCATACTCTGTACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GCQACTLICTAA*PFLIGLILCTV Trigger: AACTGTACAGAGTATGAGGCCAATAAGGAAAGGCAAGGCTGCCGTGCAAATCAAAGTACAGGCTTGACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 72 bp | TGCTTCCAGCAGCAGGAATGGCACTGCTGTCATGAATaGGAGAAAGTGCTAATTCCAGTTCTGTTTTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CFQQQEWHCCHE*EKVLIPVLFLS Trigger: AGACAAAAACAGAACTGGAATTAGCACTTTCTCCCATTCATGACAGCAGTGCCATTCCTGCTGCTGGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CAA 72 bp | ATTTTGCATACAGCATTTCAACTGCATTCCAGCTCATaGCACAGCCTGATGATTCGGTACTCTGGCAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ILHTAFQLHSSS*HSLMIRYSGSL Trigger: GAGACTGCCAGAGTACCGAATCATCAGGCTGTGCAATGAGCTGGAATGCAGTTGAAATGCTGTATGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CAA 72 bp | GGCTTCAAAATAGGATGTATCTGTTTCGTCGTCTGGTaGGGGTACGAAAGGCATAGTCTGATGCTGCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: GFKIGCICFVVW*GYERHSLMLQI Trigger: AATCTGCAGCATCAGACTATGCCTTTCGTACCCCAACCAGACGACGAAACAGATACATCCTATTTTGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS GCA 72 bp | CTTGTCAATGGTCATGTTCTCATTATCTGGGTCCCTTaGTTCCCAAGAGATTTCCCTGAAGCATTTTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LVNGHVLIIWVP*FPRDFPEAFSR Trigger: CCTAGAAAATGCTTCAGGGAAATCTCTTGGGAAGCAAGGGACCCAGATAATGAGAACATGACCATTGACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CAA 90 bp | TCATTCCAGCTCTCTTTGAATCATCAATGGTTAAAAGCATGTCCATaGCACTTTGAGCATTATCAGATAGCTTTTCTTCGCCTTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFQLSLNHQWLKACP*HFEHYQIAFLRLLA Trigger: GGCCAGAAGGCGAAGAAAAGCTATCTGATAATGCTCAAAGTGCAATGGACATGCTTTTAACCATTGATGATTCAAAGAGAGCTGGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS TCA 72 bp | GAATCATCAATGGTTAAAAGCATGTCCATTGCACTTTaGGCATTATCAGATAGCTTTTCTTCGCCTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESSMVKSMSIAL*ALSDSFSSPSG Trigger: GCCAGAAGGCGAAGAAAAGCTATCTGATAATGCTCAAAGTGCAATGGACATGCTTTTAACCATTGATGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CCA 72 bp | CTACTAGTACTTGAGGTACCCAGTCTTTTCCTACACTaGAGTAGATTAGAAGTCAGACATTTCACAGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: LLVLEVPSLFLH*SRLEVRHFTGI Trigger: AATACCTGTGAAATGTCTGACTTCTAATCTACTCCAGTGTAGGAAAAGACTGGGTACCTCAAGTACTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS GCA 72 bp | TTGTACCTGATGAGTCATATTTTTATTGATCATGTCTaGCTTTTTGACAACCTTCACTGCGTACAACTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LYLMSHIFIDHV*LFDNLHCVQLA Trigger: GGCAAGTTGTACGCAGTGAAGGTTGTCAAAAAGGCAGACATGATCAATAAAAATATGACTCATCAGGTACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS CCA 72 bp | CAAGCATGGCAGTCATCTTGTGGCAAGGAATTTTCTTaGCATTTTGGTAACACAAATAGATCTTCAGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QAWQSSCGKEFS*HFGNTNRSSVF Trigger: AAACACTGAAGATCTATTTGTGTTACCAAAATGCCAAGAAAATTCCTTGCCACAAGATGACTGCCATGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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| CDS CAA 90 bp | CACTGGAGTAGATTAGAAGTCAGACATTTCACAGGTATTTCTGGATaGGATGAAAGGGTTTCAAAACATGATTTTAGCAGTTTGCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: HWSRLEVRHFTGISG*DERVSKHDFSSLLE Trigger: TTCGAGCAAACTGCTAAAATCATGTTTTGAAACCCTTTCATCCAATCCAGAAATACCTGTGAAATGTCTGACTTCTAATCTACTCCAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS CAA 90 bp | TACAAGCATGGCAGTCATCTTGTGGCAAGGAATTTTCTTGGCATTTaGGTAACACAAATAGATCTTCAGTGTTTGGTTCTTCAAAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: YKHGSHLVARNFLGI*VTQIDLQCLVLQKS Trigger: ACTCTTTTGAAGAACCAAACACTGAAGATCTATTTGTGTTACCAAAATGCCAAGAAAATTCCTTGCCACAAGATGACTGCCATGCTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS TCA 72 bp | AAATATTCTGGAATACTTGTTGTGGTGTTTCATCATTaGAAGGGGGAATTCCTGTCAGAAATTCGAACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: KYSGILVVVFHH*KGEFLSEIRTS Trigger: GCTTGTTCGAATTTCTGACAGGAATTCCCCCTTTCAATGATGAAACACCACAACAAGTATTCCAGAATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS CAA 72 bp | CTCTCTTTGAATCATCAATGGTTAAAAGCATGTCCATaGCACTTTGAGCATTATCAGATAGCTTTTCTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLNHQWLKACP*HFEHYQIAFLR Trigger: GCGAAGAAAAGCTATCTGATAATGCTCAAAGTGCAATGGACATGCTTTTAACCATTGATGATTCAAAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
||
| CDS CCA 72 bp | TTAGTTCTCTCATTCCAGCTCTCTTTGAATCATCAATaGTTAAAAGCATGTCCATTGCACTTTGAGCATTAT | + |
|
Preference number: 6 (lower is better) Translates to: LVLSFQLSLNHQ*LKACPLHFEHY Trigger: ATAATGCTCAAAGTGCAATGGACATGCTTTTAACCATTGATGATTCAAAGAGAGCTGGAATGAGAGAACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028119.7 |
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