RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAST4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034751

Ensembl transcript IDs: ENSMUST00000099202.10, ENSMUST00000164111.2, ENSMUST00000166336.9, ENSMUST00000166726.8, ENSMUST00000167058.8, ENSMUST00000167462.8, ENSMUST00000171791.8, ENSMUST00000172264.8, ENSMUST00000194446.7, ENSMUST00000239261.2

Found 1301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTaGCTGCCACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCC +
Preference number: 1 (lower is better)
Translates to: AARDLPVSSPAALVQ*LPRICASWTHSIKA
Trigger: GGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR TCA 90 bp GGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTaGCAAAGACCCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGC +
Preference number: 1 (lower is better)
Translates to: GLCMEDIPIQCWFVR*QRPSPSYAWAGSHS
Trigger: GCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGGGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
3UTR CCA 90 bp ATTTGTGTGCAGCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTaGTCCAGTGCCTGCCACGAATATGTGCTTCTTGGACTCACAGCA +
Preference number: 1 (lower is better)
Translates to: ICVQPGTCLFPHQQR*SSACHEYVLLGLTA
Trigger: TGCTGTGAGTCCAAGAAGCACATATTCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGCTGCACACAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR GCA 90 bp TGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGAATATGTaGTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGA +
Preference number: 1 (lower is better)
Translates to: CFLTSSAGPVPATNM*FLDSQHKGLRVELR
Trigger: TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR GCA 90 bp GAGAAAGAAAGAAAGCTGACCTGCAGTGTGTTTATAGTCCCTGTGTaGCCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCA +
Preference number: 1 (lower is better)
Translates to: EKERKLTCSVFIVPV*PPVKTRHITQRQGP
Trigger: TGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAGGTCAGCTTTCTTTCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CCA 90 bp CAGAGACTGACCAAAGGGAACACGGGAGAAATCCTACCAGCTGGTTaGGGGGAGATTTCACAACAACAAACAGGTATCACATGTGAGCAA +
Preference number: 1 (lower is better)
Translates to: QRLTKGNTGEILPAG*GEISQQQTGITCEQ
Trigger: TTGCTCACATGTGATACCTGTTTGTTGTTGTGAAATCTCCCCCCAACCAGCTGGTAGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CCA 90 bp TCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTaGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAA +
Preference number: 1 (lower is better)
Translates to: SPAHRWEGRFCTNTI*QQFYRLLLGRHLEE
Trigger: TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CCA 90 bp GCTAGGTTATGTACAGAGAGCTTCTCTTCCTCACCAGCTCATCGCTaGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTAC +
Preference number: 1 (lower is better)
Translates to: ARLCTESFSSSPAHR*EGRFCTNTIWQQFY
Trigger: GTAAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAAGCTCTCTGTACATAACCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CCA 90 bp ATGTGCATGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTaGGGTCAGAGGACAAACAGTGACAACCATGTCTTCCCGACCATG +
Preference number: 1 (lower is better)
Translates to: MCMLVYSIWVQLSIC*GQRTNSDNHVFPTM
Trigger: CATGGTCGGGAAGACATGGTTGTCACTGTTTGTCCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCATGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
3UTR TCA 90 bp GTTTATTTGTTTATTCTGGTTCAATTGTTTCATTACCTGCATATTTaGGAGAGAGAAAGAGTGCGAGAGAGGGAGAGTAAGAGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: VYLFILVQLFHYLHI*ERERVRERESKRVG
Trigger: CCCCACCCTCTTACTCTCCCTCTCTCGCACTCTTTCTCTCTCTCAAATATGCAGGTAATGAAACAATTGAACCAGAATAAACAAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
3UTR GCA 90 bp ATACAAATAAAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATaGATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGC +
Preference number: 1 (lower is better)
Translates to: IQIKRLCYEMHGATR*IRNECETQELAKNS
Trigger: GCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTTTATTTGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACATGGTCAGCTGCAAGGTaGACACTCTACATCCCGACC +
Preference number: 2 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTWSAAR*TLYIPT
Trigger: GGTCGGGATGTAGAGTGTGCACCTTGCAGCTGACCA...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGAACCAAAACACATAGGTaGAGGCATACACACGCAGTT +
Preference number: 2 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRTKTHR*RHTHAV
Trigger: AACTGCGTGTGTATGCCTCCACCTATGTGTTTTGGT...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp GGCACATCTTACAACCACACAGAGACTGACCAAAGGGAACACGGGAGAAATCCTGGAGCTGTCTGGGGGTaGGGAGACAGGAGTGGGGCA +
Preference number: 2 (lower is better)
Translates to: GTSYNHTETDQREHGRNPGAVWG*GDRSGA
Trigger: TGCCCCACTCCTGTCTCCCCACCCCCAGACAGCTCC...AGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTGTGTGGTTGTAAGATGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGGGGCTGTCAAAGAGATaGCCAGCTCCCCCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGGLSKR*PAPPVL
Trigger: CAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCC...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCACCTCACCAGCAGCGCTaGTCCAGTGCCTGCCACGAA +
Preference number: 2 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPPHQQR*SSACHE
Trigger: TTCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGG...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACCCTCACCAGCAGCGCTaGTCCAGTGCCTGCCACGAA +
Preference number: 2 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNPHQQR*SSACHE
Trigger: TTCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGG...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACGTGGGGAGACAGGAGTaGGGCAGAATCTCCCTTTTC +
Preference number: 2 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNVGRQE*GRISLF
Trigger: GAAAAGGGAGATTCTGCCCCACTCCTGTCTCCCCAC...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CAA 90 bp GGGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTaGGCAACCAAGGGCAACCAGGCAGATGGTGACGTGATGCCTTTG +
Preference number: 2 (lower is better)
Translates to: GQNLPFPFLLPSPTG*ATKGNQADGDVMPL
Trigger: CAAAGGCATCACGTCACCATCTGCCTGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp AGGTATGGAATTGAAAAGGTGGGGAGGACCTGGGAGGAGGTAAGGAAATTACTGCCCGACCATGTGTGCTaGAGGGGTGGTATCAGGCAT +
Preference number: 2 (lower is better)
Translates to: RYGIEKVGRTWEEVRKLLPDHVC*RGGIRH
Trigger: ATGCCTGATACCACCCCTGCAGCACACATGGTCGGG...CAGTAATTTCCTTACCTCCTCCCAGGTCCTCCCCACCTTTTCAATTCCATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
3UTR-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACTCACCAGCTCATCGCTaGGAAGGCAGGTTTTGTACA +
Preference number: 2 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYSPAHR*EGRFCT
Trigger: TGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGA...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCACCAAAACACATAGGTaGAGGCATACACACGCAGTT +
Preference number: 2 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVATKTHR*RHTHAV
Trigger: AACTGCGTGTGTATGCCTCCACCTATGTGTTTTGGT...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CAA 90 bp GTGGTCAGCTGCAAGGTGCACACTCTACATCCCGACCCAAACACATaGCTAGGTTATGTACAGAGAGCTTCTCTTCCTCACCAGCTCATC +
Preference number: 2 (lower is better)
Translates to: VVSCKVHTLHPDPNT*LGYVQRASLPHQLI
Trigger: GATGAGCTGGTGAGGAAGAGAAGCTCTCTGTACATAACCTAGCAATGTGTTTGGGTCGGGATGTAGAGTGTGCACCTTGCAGCTGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR TCA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACAAAGTCTGTAAACCATaGACTACCTCCTGGACAGAC +
Preference number: 2 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNKVCKP*TTSWTD
Trigger: GTCTGTCCAGGAGGTAGTTCATGGTTTACAGACTTT...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGAGCAAGGTGGTCAGCTaGAAGGTGCACACTCTACAT +
Preference number: 2 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLSKVVS*KVHTLH
Trigger: ATGTAGAGTGTGCACCTTGCAGCTGACCACCTTGCT...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACAGCAAGGTGGTCAGCTaGAAGGTGCACACTCTACAT +
Preference number: 2 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSKVVS*KVHTLH
Trigger: ATGTAGAGTGTGCACCTTGCAGCTGACCACCTTGCT...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGCCTGCCACGAATATGTaGTTCTTGGACTCACAGCAT +
Preference number: 2 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGPATNM*FLDSQH
Trigger: ATGCTGTGAGTCCAAGAAGCACATATTCGTGGCAGG...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTCACCAGCTCATCGCTaGGAAGGCAGGTTTTGTACA +
Preference number: 2 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSPAHR*EGRFCT
Trigger: TGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCTCCTTATGAGCCTCTaGGCTCTGCATGGAGGACAT +
Preference number: 2 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLLMSL*ALHGGH
Trigger: ATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTTGGTCAGCTGCAAGGTaGACACTCTACATCCCGACC +
Preference number: 2 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVWSAAR*TLYIPT
Trigger: GGTCGGGATGTAGAGTGTGCACCTTGCAGCTGACCA...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp GGCACATCTTACAACCACACAGAGACTGACCAAAGGGAACACGGGAGAAATCCTCCTGCCACGAATATGTaGTTCTTGGACTCACAGCAT +
Preference number: 2 (lower is better)
Translates to: GTSYNHTETDQREHGRNPPATNM*FLDSQH
Trigger: ATGCTGTGAGTCCAAGAAGCACATATTCGTGGCAGG...AGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTGTGTGGTTGTAAGATGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGACGCTGGTCCAGTGCCTaGCACGAATATGTGCTTCTT +
Preference number: 2 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRRWSSA*HEYVLL
Trigger: AAGAAGCACATATTCGTGGCAGGCACTGGACCAGCG...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACACTCTACTTCTACAAATaGAGCCTTGAACTATTCTCA +
Preference number: 2 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTLYFYK*SLELFS
Trigger: TGAGAATAGTTCAAGGCTCCATTTGTAGAAGTAGAG...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR TCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCACACCTCCCCCAGCCTaGCCACTTTGCTTTCTTACT +
Preference number: 2 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFTPPPA*PLCFLT
Trigger: AGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGT...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR TCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATGCTGGTTTGTAAGGTaGCAAAGACCCAGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: YKHYLATVLPVTTGKASGCWFVR*QRPSPS
Trigger: GCTGGGACTGGGTCTTTGTCACCTTACAAACCAGCA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGACTCCTTATGAGCCTCTaGGCTCTGCATGGAGGACAT +
Preference number: 2 (lower is better)
Translates to: YKHYLATVLPVTTGKASGLLMSL*ALHGGH
Trigger: ATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
3UTR-3UTR TCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAACACCTCCCCCAGCCTaGCCACTTTGCTTTCTTACT +
Preference number: 2 (lower is better)
Translates to: HGATRCIRNECETQELAKTPPPA*PLCFLT
Trigger: AGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGT...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR TCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTGCTGGTTTGTAAGGTaGCAAAGACCCAGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: MKCMELLDASEMNVKPRNCWFVR*QRPSPS
Trigger: GCTGGGACTGGGTCTTTGTCACCTTACAAACCAGCA...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCACATGGAGCTACTCGATaGATCAGAAATGAATGTGAA +
Preference number: 2 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPHGATR*IRNECE
Trigger: TTCACATTCATTTCTGATGCATCGAGTAGCTCCATG...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAGCAAGGTGGTCAGCTaGAAGGTGCACACTCTACAT +
Preference number: 2 (lower is better)
Translates to: HGATRCIRNECETQELAKSKVVS*KVHTLH
Trigger: ATGTAGAGTGTGCACCTTGCAGCTGACCACCTTGCT...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGCGCTGGTCCAGTGCCTaGCACGAATATGTGCTTCTT +
Preference number: 2 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQRWSSA*HEYVLL
Trigger: AAGAAGCACATATTCGTGGCAGGCACTGGACCAGCG...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGTGCAGCCAGGGACTTaGCTGTTTCCTCACCAGCAG +
Preference number: 2 (lower is better)
Translates to: KRLCYEMHGATRCIRNECVQPGT*LFPHQQ
Trigger: CTGCTGGTGAGGAAACAGGCAAGTCCCTGGCTGCAC...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGTGTACAAACACTATCTaGCAACAGTTTTACCGGTTA +
Preference number: 2 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGCTNTI*QQFYRL
Trigger: TAACCGGTAAAACTGTTGCCAGATAGTGTTTGTACA...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp AGGTATGGAATTGAAAAGGTGGGGAGGACCTGGGAGGAGGTAAGGAAATTACTGCAACTTAGCATTTGTTaGGGTCAGAGGACAAACAGT +
Preference number: 2 (lower is better)
Translates to: RYGIEKVGRTWEEVRKLLQLSIC*GQRTNS
Trigger: ACTGTTTGTCCTCTGACCCCAACAAATGCTAAGTTG...CAGTAATTTCCTTACCTCCTCCCAGGTCCTCCCCACCTTTTCAATTCCATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
3UTR-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTGTACAAACACTATCTaGCAACAGTTTTACCGGTTA +
Preference number: 2 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNCTNTI*QQFYRL
Trigger: TAACCGGTAAAACTGTTGCCAGATAGTGTTTGTACA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CAA 90 bp ATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTaGCTAAAAACAGCAAGCTTCATCTACAACATAAGGCCCCAGCTA +
Preference number: 2 (lower is better)
Translates to: MELLDASEMNVKPRN*LKTASFIYNIRPQL
Trigger: TAGCTGGGGCCTTATGTTGTAGATGAAGCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR TCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTACACCTCCCCCAGCCTaGCCACTTTGCTTTCTTACT +
Preference number: 2 (lower is better)
Translates to: KRLCYEMHGATRCIRNECTPPPA*PLCFLT
Trigger: AGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGT...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR TCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGAACAGGTATCACATGTaGGCAACCTTAAGTACTCCT +
Preference number: 2 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQNRYHM*ATLSTP
Trigger: AGGAGTACTTAAGGTTGCTCACATGTGATACCTGTT...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTCCTGCCACGAATATGTaGTTCTTGGACTCACAGCAT +
Preference number: 2 (lower is better)
Translates to: KRLCYEMHGATRCIRNECPATNM*FLDSQH
Trigger: ATGCTGTGAGTCCAAGAAGCACATATTCGTGGCAGG...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATGTACAAACACTATCTaGCAACAGTTTTACCGGTTA +
Preference number: 2 (lower is better)
Translates to: YKHYLATVLPVTTGKASGCTNTI*QQFYRL
Trigger: TAACCGGTAAAACTGTTGCCAGATAGTGTTTGTACA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAACTCTACTTCTACAAATaGAGCCTTGAACTATTCTCA +
Preference number: 2 (lower is better)
Translates to: HGATRCIRNECETQELAKLYFYK*SLELFS
Trigger: TGAGAATAGTTCAAGGCTCCATTTGTAGAAGTAGAG...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR GCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCATGGAGCTACTCGATaGATCAGAAATGAATGTGAA +
Preference number: 2 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKHGATR*IRNECE
Trigger: TTCACATTCATTTCTGATGCATCGAGTAGCTCCATG...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CAA 90 bp AAGTCTTGTTATGGATCCCAAGCATCTTATAAAAATTTGTCTGCATaGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCC +
Preference number: 2 (lower is better)
Translates to: KSCYGSQASYKNLSA*CLSQQVPSYNSKQA
Trigger: GGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAATTTTTATAAGATGCTTGGGATCCATAACAAGACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR GCA 72 bp GGGTCAAAATGTCCCTTACGAGGGCTGTCAAAGAGATaGCCAGCTCCCCCTGTCCTGGCCACTCCTAGCGGA +
Preference number: 3 (lower is better)
Translates to: GSKCPLRGLSKR*PAPPVLATPSG
Trigger: TCCGCTAGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGGACATTTTGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CCA 72 bp CAGCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTaGTCCAGTGCCTGCCACGAATATGTGCTTCTTGGA +
Preference number: 3 (lower is better)
Translates to: QPGTCLFPHQQR*SSACHEYVLLG
Trigger: TCCAAGAAGCACATATTCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CAA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGAAGGACCATTGCCTTTaGGGCCACTTGGACCTGAGG +
Preference number: 3 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQKDHCL*GHLDLR
Trigger: CCTCAGGTCCAAGTGGCCCAAAAGGCAATGGTCCTT...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR GCA 72 bp GACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTaGCTGCCACGAATATGTGCTTCTTGGACTCACAGC +
Preference number: 3 (lower is better)
Translates to: DLPVSSPAALVQ*LPRICASWTHS
Trigger: GCTGTGAGTCCAAGAAGCACATATTCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR GCA 72 bp TGCGTATCGCTCCACCTAAGTGCTAGCGGATTTGTGTaGAGCCAGGGACTTGCCTGTTTCCTCACCAGCAGC +
Preference number: 3 (lower is better)
Translates to: CVSLHLSASGFV*SQGLACFLTSS
Trigger: GCTGCTGGTGAGGAAACAGGCAAGTCCCTGGCTGCACACAAATCCGCTAGCACTTAGGTGGAGCGATACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CAA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACAAGGACCATTGCCTTTaGGGCCACTTGGACCTGAGG +
Preference number: 3 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNKDHCL*GHLDLR
Trigger: CCTCAGGTCCAAGTGGCCCAAAAGGCAATGGTCCTT...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR GCA 72 bp ACCAGCAGCGCTGGTCCAGTGCCTGCCACGAATATGTaGTTCTTGGACTCACAGCATAAAGGCCTGAGGGTA +
Preference number: 3 (lower is better)
Translates to: TSSAGPVPATNM*FLDSQHKGLRV
Trigger: TACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGTGGCAGGCACTGGACCAGCGCTGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR TCA 72 bp GCTTGGCAACCAAGGGCAACCAGGCAGATGGTGACGTaGTGCCTTTGTTTCTGGAGTGCTTACAACCTCGCT +
Preference number: 3 (lower is better)
Translates to: AWQPRATRQMVT*CLCFWSAYNLA
Trigger: AGCGAGGTTGTAAGCACTCCAGAAACAAAGGCATCACGTCACCATCTGCCTGGTTGCCCTTGGTTGCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR TCA 72 bp ATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTaGCAAAGACCCAGTCCCAGCTACGCTTGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: MEDIPIQCWFVR*QRPSPSYAWAG
Trigger: CCCAGCCCAAGCGTAGCTGGGACTGGGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
3UTR GCA 72 bp GTCACTCTAGCACATCGTCTTCTACCCATCTTGCACTaGCAATGCCTCTGTAGCCAGGGACTGCCTGCTAGA +
Preference number: 3 (lower is better)
Translates to: VTLAHRLLPILH*QCLCSQGLPAR
Trigger: TCTAGCAGGCAGTCCCTGGCTACAGAGGCATTGGCAGTGCAAGATGGGTAGAAGACGATGTGCTAGAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
3UTR GCA 72 bp CTAGCACATCGTCTTCTACCCATCTTGCACTGCCAATaGCTCTGTAGCCAGGGACTGCCTGCTAGACACTTT +
Preference number: 3 (lower is better)
Translates to: LAHRLLPILHCQ*LCSQGLPARHF
Trigger: AAAGTGTCTAGCAGGCAGTCCCTGGCTACAGAGGCATTGGCAGTGCAAGATGGGTAGAAGACGATGTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
3UTR GCA 72 bp CAATCTAGAAAAGCTTCGGTCAGCAAGGTGGTCAGCTaGAAGGTGCACACTCTACATCCCGACCCAAACACA +
Preference number: 3 (lower is better)
Translates to: QSRKASVSKVVS*KVHTLHPDPNT
Trigger: TGTGTTTGGGTCGGGATGTAGAGTGTGCACCTTGCAGCTGACCACCTTGCTGACCGAAGCTTTTCTAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR GCA 72 bp CCATCTTGCACTGCCAATGCCTCTGTAGCCAGGGACTaGCTGCTAGACACTTTTCTTCTTCATATTGCCGTG +
Preference number: 3 (lower is better)
Translates to: PSCTANASVARD*LLDTFLLHIAV
Trigger: CACGGCAATATGAAGAAGAAAAGTGTCTAGCAGGCAGTCCCTGGCTACAGAGGCATTGGCAGTGCAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
3UTR-3UTR CAA 90 bp TGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGACAAGGGTGGTATCAGGCATaGCTGCTGCCCACAGACCCT +
Preference number: 3 (lower is better)
Translates to: CLYTVYGCNLAFVGVRGQGWYQA*LLPTDP
Trigger: AGGGTCTGTGGGCAGCAGCAATGCCTGATACCACCC...TTGTCCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
3UTR GCA 72 bp AGAAAGCTGACCTGCAGTGTGTTTATAGTCCCTGTGTaGCCTCCGGTGAAGACCAGACATATAACCCAGAGA +
Preference number: 3 (lower is better)
Translates to: RKLTCSVFIVPV*PPVKTRHITQR
Trigger: TCTCTGGGTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAGGTCAGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CCA 72 bp ACCAAAGGGAACACGGGAGAAATCCTACCAGCTGGTTaGGGGGAGATTTCACAACAACAAACAGGTATCACA +
Preference number: 3 (lower is better)
Translates to: TKGNTGEILPAG*GEISQQQTGIT
Trigger: TGTGATACCTGTTTGTTGTTGTGAAATCTCCCCCCAACCAGCTGGTAGGATTTCTCCCGTGTTCCCTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CCA 72 bp CATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTaGCAACAGTTTTACCGGTTACTACTGGGAAGGCAT +
Preference number: 3 (lower is better)
Translates to: HRWEGRFCTNTI*QQFYRLLLGRH
Trigger: ATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CAA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAACGAATATGTGCTTCTaGGACTCACAGCATAAAGGC +
Preference number: 3 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRTNMCF*DSQHKG
Trigger: GCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CAA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGTGTGCAGCCAGGGACTaGCCTGTTTCCTCACCAGCA +
Preference number: 3 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKCAARD*PVSSPA
Trigger: TGCTGGTGAGGAAACAGGCAAGTCCCTGGCTGCACA...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR GCA 72 bp ACAACCTCGCTAGGTGATTTACAATCCACAGGGCTGTaGTCACATAAACAATCCTATGGTGTACAGATACCA +
Preference number: 3 (lower is better)
Translates to: TTSLGDLQSTGL*SHKQSYGVQIP
Trigger: TGGTATCTGTACACCATAGGATTGTTTATGTGAGCACAGCCCTGTGGATTGTAAATCACCTAGCGAGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CCA 72 bp CTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTaGGGTCAGAGGACAAACAGTGACAACCATGTCTTC +
Preference number: 3 (lower is better)
Translates to: LVYSIWVQLSIC*GQRTNSDNHVF
Trigger: GAAGACATGGTTGTCACTGTTTGTCCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
3UTR-3UTR CAA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATACCCAGCCTGACCACTTaGCTTTCTTACTACGTTATG +
Preference number: 3 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIPSLTT*LSYYVM
Trigger: CATAACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGG...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR TCA 72 bp GGGGGAGATTTCACAACAACAAACAGGTATCACATGTaGGCAACCTTAAGTACTCCTTTACTCGTCCAAAAT +
Preference number: 3 (lower is better)
Translates to: GGDFTTTNRYHM*ATLSTPLLVQN
Trigger: ATTTTGGACGAGTAAAGGAGTACTTAAGGTTGCTCACATGTGATACCTGTTTGTTGTTGTGAAATCTCCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR TCA 72 bp CTTATGCAATTTGCCTTTGTTGCCCAATACTATATCTaGGTTTCATTCATGCAGACATGTGCAGGGCTAGCT +
Preference number: 3 (lower is better)
Translates to: LMQFAFVAQYYI*VSFMQTCAGLA
Trigger: AGCTAGCCCTGCACATGTCTGCATGAATGAAACTCAGATATAGTATTGGGCAACAAAGGCAAATTGCATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
3UTR-3UTR CAA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTAACGAATATGTGCTTCTaGGACTCACAGCATAAAGGC +
Preference number: 3 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLTNMCF*DSQHKG
Trigger: GCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CAA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTAGTGAAACCCAGGAACTaGCTAAAAACAGCAAGCTTC +
Preference number: 3 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLVKPRN*LKTASF
Trigger: GAAGCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCAC...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR GCA 72 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATaGATCAGAAATGAATGTGAAACCCAGGAACTTGCT +
Preference number: 3 (lower is better)
Translates to: KRLCYEMHGATR*IRNECETQELA
Trigger: AGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR-3UTR CAA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGAAAAATTTGTCTGCATaGTGTCTTAGTCAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQKNLSA*CLSQQV
Trigger: CACTTGCTGACTAAGACACAATGCAGACAAATTTTT...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR TCA 72 bp TTTATTCTGGTTCAATTGTTTCATTACCTGCATATTTaGGAGAGAGAAAGAGTGCGAGAGAGGGAGAGTAAG +
Preference number: 3 (lower is better)
Translates to: FILVQLFHYLHI*ERERVRERESK
Trigger: CTTACTCTCCCTCTCTCGCACTCTTTCTCTCTCTCAAATATGCAGGTAATGAAACAATTGAACCAGAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR GCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTACCGCTCCTCCCGGGTaGGGCAGCGGCAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPTAPPG*GSGRVG
Trigger: CCCTACCCTGCCGCTGCCGCACCCGGGAGGAGCGGT...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGACCAGGCCATGGAGGGTaGTGGGCCGGATGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRPGHGG*WAGCAL
Trigger: CAGGGCACATCCGGCCCAGCACCCTCCATGGCCTGG...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTCGGAGGGGCTCTTCCTaGCAGGGGACTCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPRRGSS*QGTREQ
Trigger: CTGCTCCCGAGTCCCCTGTCAGGAAGAGCCCCTCCG...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTAGGTCACCCCCTCGCTaGCCCTCACGCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPRSPPR*PSRWPA
Trigger: AGCAGGCCAGCGTGAGGGCCAGCGAGGGGGTGACCT...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGATGTAGCCTTGGCAGATaGGGGGCTGCTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRCSLGR*GAAVGC
Trigger: GCAGCCAACAGCAGCCCCTCATCTGCCAAGGCTACA...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTCCTGTGGTCCCTGCTaGTGGGGGCTGGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPSCGPC*WGLGTL
Trigger: CAGAGTTCCCAGCCCCCAGCAGCAGGGACCACAGGA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTACCTCGGGCTCCTCCTaGGTACACTCCTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPTSGSS*VHSSEG
Trigger: TCCCTCTGAGGAGTGTACTCAGGAGGAGCCCGAGGT...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTACCTCGGGCTCCTCCTaGGTACACTCCTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPTSGSS*VHSSEG
Trigger: TCCCTCTGAGGAGTGTACTCAGGAGGAGCCCGAGGT...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTGGACAAGCTGTGAGTTaGGGAACCCGGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPGQAVS*GTREAL
Trigger: GAGAGCCTCCCGGGTTCCCCAACTCACAGCTTGTCC...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGCTGCGAGAGAGTCCTaGAGAGCCCGGCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTAARES*RARLGG
Trigger: ACCCCCGAGCCGGGCTCTCCAGGACTCTCTCGCAGC...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTACCCTCAATTCCTGGTaGCTGAGGAGGGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPTLNSW*LRRAPG
Trigger: ACCCGGTGCCCTCCTCAGCCACCAGGAATTGAGGGT...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGAGAGCGGGGCGGGCAATaGCAATTAGGATCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRERGGQ*QLGSFG
Trigger: TCCGAAAGATCCTAATTGTCATTGCCCGCCCCGCTC...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTGTGCCCCATGGAGGTaGCCAACAGGTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPCAPWR*PTGCLA
Trigger: AGCCAGACAACCTGTTGGTCACCTCCATGGGGCACA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTTGGTGCTTAGACTTTaGAGGGCTGGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPLVLRL*RAGVRA
Trigger: GGCCCTGACCCCAGCCCTTCAAAGTCTAAGCACCAA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTCCCCAGTGGTAGCCTaGTGGCTTGGGCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPSPVVA*WLGLLS
Trigger: AGACAGAAGCCCAAGCCATCAGGCTACCACTGGGGA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CACATCGTCTTCTACCCATCTTGCACTGCCAATGCCTCTGTAGCCAGGGACTGCGGAGGTACCTCCCTGTaGGGGCTCCTCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HIVFYPSCTANASVARDCGGTSL*GLLPGS
Trigger: GGAGCCTGGGAGGAGCCCTCACAGGGAGGTACCTCC...GCAGTCCCTGGCTACAGAGGCATTGGCAGTGCAAGATGGGTAGAAGACGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR GCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTGGGCTGGGACTCTGTaGAGGCTCTGGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPWAGTL*RLWGKQ
Trigger: TTGCTTTCCCCAGAGCCTGCACAGAGTCCCAGCCCA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCGGGGCTGCTGTTGGCTaGAGGGACCTCTCGCACTCC +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVAGAAVG*RDLSHS
Trigger: GGAGTGCGAGAGGTCCCTGCAGCCAACAGCAGCCCC...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGACTCGCAAATGAGAAATaGGCTGAGGCACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRLANEK*AEALGE
Trigger: CTCCCCCAGTGCCTCAGCCCATTTCTCATTTGCGAG...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGCCATGGAGGGTGCTaGGCCGGATGTGCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTGHGGC*AGCALN
Trigger: GTTCAGGGCACATCCGGCCCAGCACCCTCCATGGCC...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTCCGAAACGGCATGGGTaGCGGAGACAGTATGTGGTC +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPPKRHG*RRQYVV
Trigger: GACCACATACTGTCTCCGCCACCCATGCCGTTTCGG...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR TCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACCGGAGGGGCTCTTCCTaGCAGGGGACTCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYRRGSS*QGTREQ
Trigger: CTGCTCCCGAGTCCCCTGTCAGGAAGAGCCCCTCCG...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTCTGTTTTGGAGGCGTaGGGTCCAGACAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPSVLEA*GPDRRA
Trigger: TGCTCTCCTGTCTGGACCTCACGCCTCCAAAACAGA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTCTCCTGGCAGAAGGATaGATGAGCTTCCTTTCCGGC +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPLLAEG*MSFLSG
Trigger: GCCGGAAAGGAAGCTCATTCATCCTTCTGCCAGGAG...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACCTTGGGATGCGCTGCTaGCCTGGGGCACCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYLGMRC*PGAPAA
Trigger: TGCTGCCGGTGCCCCAGGTCAGCAGCGCATCCCAAG...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR TCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGATCTCTTGTACTTCAGTaGTTTTCCGAGGCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRSLVLQ*FSEAAG
Trigger: GCCTGCGGCCTCGGAAAATCACTGAAGTACAAGAGA...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR TCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCCCTTCAAGCTGGCTGTaGGCGAGGGAGCCGATTGGC +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVAPSSWL*AREPIG
Trigger: GCCAATCGGCTCCCTCGCTCACAGCCAGCTTGAAGG...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTGTCCTTCAGCAGGCTaGCCACAGAAGGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPCPSAG*PQKATL
Trigger: CAGAGTTGCCTTCTGTGGGCAGCCTGCTGAAGGACA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGGGGCTGCTGTTGGCTaGAGGGACCTCTCGCACTCC +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSGAAVG*RDLSHS
Trigger: GGAGTGCGAGAGGTCCCTGCAGCCAACAGCAGCCCC...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACGGCCAAGGGCCTGGCTaGGCATGCGCACGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYGQGPG*ACARGW
Trigger: CCAACCTCGTGCGCATGCGCAGCCAGGCCCTTGGCC...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTGGAGACGGTGGAGCTTaGGGTATTTGTCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPGDGGA*GICPIA
Trigger: GGCTATGGGACAAATACCCCAAGCTCCACCGTCTCC...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTCCACGAAGGCCTGCTaGATCTGGTTCCGAAGGATG +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPSTKAC*IWFRRM
Trigger: CATCCTTCGGAACCAGATCCAGCAGGCCTTCGTGGA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGAGAGCCACGTGAGAAGTaGGTTCACTGGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPREPREK*VHWMAL
Trigger: CAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTC...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTCAGAAGAGTCTCGGCTaGGAGAGGAATCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPQKSLG*ERNPVK
Trigger: CTTCACGGGATTCCTCTCCCAGCCGAGACTCTTCTG...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGAAACCTGCTGGAGAATTaGGGGCACTTGAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRNLLEN*GHLNLG
Trigger: CCCCAAGTTCAAGTGCCCCCAATTCTCCAGCAGGTT...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCGCTGCGAGAGAGTCCTaGAGAGCCCGGCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFAARES*RARLGG
Trigger: ACCCCCGAGCCGGGCTCTCCAGGACTCTCTCGCAGC...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTCTCTGTGACAGTTGCTaGGCTCCTGGCAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPLCDSC*APGRRM
Trigger: CATCCTTCTGCCAGGAGCCCAGCAACTGTCACAGAG...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTAAGCTGAGTCCTCCCTaGCCAGGGACTTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPKLSPP*PGTSPH
Trigger: ATGAGGTGAAGTCCCTGGCCAGGGAGGACTCAGCTT...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGAGCGATCTGTGCTTaGGGCTGGGGGTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTGAICA*GWGCSG
Trigger: ACCAGAGCACCCCCAGCCCCAAGCACAGATCGCTCC...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTTCCTGCTACCGGGTTTaGAAGGAGGTACCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPSCYRV*KEVPPC
Trigger: ACAGGGAGGTACCTCCTTCCAAACCCGGTAGCAGGA...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGAGCGAGGGAGCCGATTaGCCAAGGGCCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVSEGAD*PRAWLR
Trigger: GCGCAGCCAGGCCCTTGGCCAATCGGCTCCCTCGCT...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167058.8
CDS-3UTR TCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTTGCTAGGAAAGGCCTaGGTGATCTTGGCATTGCCC +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPLLGKA*VILALP
Trigger: GGGCAATGCCAAGATCACTCAGGCCTTTCCTAGCAA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTTGGATCCTGGAAATGTaGCTCCAGAGCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPWILEM*LQSRGG
Trigger: TCCACCTCTGCTCTGGAGTCACATTTCCAGGATCCA...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCGTGTGGTCGAGGCAGTaGTGGAGACTGGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVAVWSRQ*WRLAIA
Trigger: GGCAATGGCCAGTCTCCAGCACTGCCTCGACCACAC...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGGAGCGGGGCGGCTCTaGACTCTTGGGCCTCACGAT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVGAGRL*TLGPHD
Trigger: ATCGTGAGGCCCAAGAGTGCAGAGCCGCCCCGCTCC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTCACAAGCACATCACTTaGTTTGCCCTGGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPHKHIT*FALGGQ
Trigger: CTGACCACCCAGGGCAAAGCAAGTGATGTGCTTGTG...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGGGGCTGCTGTTGGCTaGAGGGACCTCTCGCACTCC +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVGAAVG*RDLSHS
Trigger: GGAGTGCGAGAGGTCCCTGCAGCCAACAGCAGCCCC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTCCTGTGGTCCCTGCTaGTGGGGGCTGGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSSCGPC*WGLGTL
Trigger: CAGAGTTCCCAGCCCCCAGCAGCAGGGACCACAGGA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACCTGCTCCTCTTGGGATaGGCTGCTGACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNLLLLG*AADLGH
Trigger: GTGCCCCAGGTCAGCAGCGCATCCCAAGAGGAGCAG...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTTCAAGCTCTTCATCCTaGTCCTCTTGGGATGCGCTG +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPSSSSS*SSWDAL
Trigger: CAGCGCATCCCAAGAGGAGCAGGATGAAGAGCTTGA...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTAGGCCACATCTGGGTTaGTGCATTTCCGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPRPHLG*CISETA
Trigger: TGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCT...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACGCTGATGGTGCTGGCTaGGGTGGTGACCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYADGAG*GGDLGL
Trigger: GAGCCCGAGGTCACCACCCCAGCCAGCACCATCAGC...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGTCCCACGTTGATGCCTaGGCTGGGACTCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQSHVDA*AGTLCR
Trigger: CCTGCACAGAGTCCCAGCCCAGGCATCAACGTGGGA...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGACTGTTCCTTCCTGTCTaGCTCTTTGGGAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRLFLPV*LFGSLF
Trigger: AAACAGGCTCCCAAAGAGCCAGACAGGAAGGAACAG...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCGGTGGAGAGAAGGGCTaGCCTCTGGCTTGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVAGGEKG*PLACSP
Trigger: AGGGCTACAAGCCAGAGGCCAGCCCTTCTCTCCACC...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTCTCGCACTCCAGGCTaGGCCTCGGGAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSSRTPG*ASGKLA
Trigger: AGCCAGCTTTCCCGAGGCCCAGCCTGGAGTGCGAGA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CACATCGTCTTCTACCCATCTTGCACTGCCAATGCCTCTGTAGCCAGGGACTGCTGCAGGAGAAGCGGCTaGGCTCCCCTTCCTCCGACA +
Preference number: 4 (lower is better)
Translates to: HIVFYPSCTANASVARDCCRRSG*APLPPT
Trigger: TGTCGGAGGAAGGGGAGCCCAGCCGCTTCTCCTGCA...GCAGTCCCTGGCTACAGAGGCATTGGCAGTGCAAGATGGGTAGAAGACGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR TCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGCGGAGGGGCTCTTCCTaGCAGGGGACTCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKRRGSS*QGTREQ
Trigger: CTGCTCCCGAGTCCCCTGTCAGGAAGAGCCCCTCCG...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTTGGCAGAAGGATGAATaGGCTTCCTTTCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPWQKDE*ASFPAL
Trigger: CAAAGCCGGAAAGGAAGCTCATTCATCCTTCTGCCA...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCACGGTGGCAGAGGGTaGCCTTTTCATACCGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSHGGRG*PFHTAG
Trigger: CCCAGCGGTATGAAAAGGTCACCCTCTGCCACCGTG...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACCCCGGCCTTCAGTCCTaGCTGGTATGCGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYPGLQS*LVCGTS
Trigger: GGAAGTCCCGCATACCAGGCAGGACTGAAGGCCGGG...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCCAGGCCATGGAGGGTaGTGGGCCGGATGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTPGHGG*WAGCAL
Trigger: CAGGGCACATCCGGCCCAGCACCCTCCATGGCCTGG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGTGGGCTGGGACTCTGTaGAGGCTCTGGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQWAGTL*RLWGKQ
Trigger: TTGCTTTCCCCAGAGCCTGCACAGAGTCCCAGCCCA...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTGGCAGATGAGGGGCTaGTGTTGGCTGCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSWQMRG*CWLQGP
Trigger: AGGTCCCTGCAGCCAACAGCAGCCCCTCATCTGCCA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGCTTCCTGTGGTCCCTaGTGCTGGGGGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVASCGP*CWGLGT
Trigger: AGTTCCCAGCCCCCAGCAGCAGGGACCACAGGAAGC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGCTTCCTGTGGTCCCTaGTGCTGGGGGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVASCGP*CWGLGT
Trigger: AGTTCCCAGCCCCCAGCAGCAGGGACCACAGGAAGC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGGGGCCTGGCTGCGCATaGGCACGAGGTTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGGPGCA*ARGWTS
Trigger: AGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCC...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTGGTGCAACTTCTCCTaGGAAGAACAGGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPWCNFS*EEQDEE
Trigger: CTCCTCATCCTGTTCTTCCCAGGAGAAGTTGCACCA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGACTGAGCTGTGGCCTTTaGGAACCTTTCTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRLSCGL*EPFFVD
Trigger: GTCTACAAAGAAAGGTTCCCAAAGGCCACAGCTCAG...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGACTTCCATCTGAGCTGTaGCCTTTGGGAACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRLPSEL*PLGTFL
Trigger: AAGAAAGGTTCCCAAAGGCCACAGCTCAGATGGAAG...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTGGCCTTCTTTGGCATaGCCTTCTGCAGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPWPSLA*PSAASN
Trigger: ATTGGAAGCTGCAGAAGGCCATGCCAAAGAAGGCCA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAGCCTTGCTCCACTaGCCTGGCCCGACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVTALLH*PGPTEG
Trigger: TCCCTCAGTCGGGCCAGGCCAGTGGAGCAAGGCTGT...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCGCTGGCCCTCACGCTaGCCTGCTTGTGAAGAGTGT +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSRWPSR*PACEEC
Trigger: ACACTCTTCACAAGCAGGCCAGCGTGAGGGCCAGCG...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTCCCACGTTGATGCCTaGGCTGGGACTCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSSHVDA*AGTLCR
Trigger: CCTGCACAGAGTCCCAGCCCAGGCATCAACGTGGGA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACTCAGTGGAGCGGTCTTaGTGTGTGGCGGGACCACCC +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYSVERS*CVAGPP
Trigger: GGGTGGTCCCGCCACACACCAAGACCGCTCCACTGA...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTCCTGTCTGGCTCTTTaGGAGCCTGTTTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPSCLAL*EPVSAK
Trigger: CTTTGCAGAAACAGGCTCCCAAAGAGCCAGACAGGA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTCTGTTCCTTCCTGTCTaGCTCTTTGGGAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPLFLPV*LFGSLF
Trigger: AAACAGGCTCCCAAAGAGCCAGACAGGAAGGAACAG...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACACAGCTCTTTGGTGGGTaGGGGTTGTTGAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTQLFGG*GLLRAT
Trigger: AGTGGCCCTCAACAACCCCCACCCACCAAAGAGCTG...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCAGAAGGGCTGGCCTCTaGCTTGTAGCCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFRRAGL*LVALWG
Trigger: GCCCCAGAGGGCTACAAGCCAGAGGCCAGCCCTTCT...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTATCTGTGCTTGGGGCTaGGGGTGCTCTGGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVICAWG*GCSGRL
Trigger: GAGGCGACCAGAGCACCCCCAGCCCCAAGCACAGAT...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCTCATCCTGCTCCTCTTaGGATGCGCTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVASSCSS*DALLTW
Trigger: CCAGGTCAGCAGCGCATCCCAAGAGGAGCAGGATGA...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR TCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTAAGGTAATCAGCTCCTaGGCGTCTGGAGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVKVISS*ASGGGA
Trigger: GGCCCCTCCTCCAGACGCTCAGGAGCTGATTACCTT...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACCGCTGTCGAGCCACGTaGGAAGTGGGTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNRCRAT*EVGSLD
Trigger: ATCCAGTGAACCCACTTCTCACGTGGCTCGACAGCG...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCTGGATGACAATGGGCTaGTGCGGACTGGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVAWMTMG*CGLADA
Trigger: AGCATCTGCCAGTCCGCATCAGCCCATTGTCATCCA...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGTGGATGACAATGGGCTaGTGCGGACTGGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQWMTMG*CGLADA
Trigger: AGCATCTGCCAGTCCGCATCAGCCCATTGTCATCCA...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGAGGAGCTCTTTGGCCTaGGAGGCCTTCTCCGAGTAT +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQRSSLA*EAFSEY
Trigger: ATACTCGGAGAAGGCCTCTCAGGCCAAAGAGCTCCT...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGTGCCCTCGATCGGCTTaGGACATGAAACTGACCTGC +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQCPRSA*DMKLTC
Trigger: GCAGGTCAGTTTCATGTCTCAAGCCGATCGAGGGCA...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTCACATGGTCCCACGTTaGTGCCTGGGCTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVHMVPR*CLGWDS
Trigger: AGAGTCCCAGCCCAGGCATCAACGTGGGACCATGTG...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCGAAGATTGCTCTCTGTaGCAGTTGCTGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVAEDCSL*QLLGSW
Trigger: CCAGGAGCCCAGCAACTGTCACAGAGAGCAATCTTC...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTCACGGTGGCAGAGGGTaGCCTTTTCATACCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVHGGRG*PFHTAG
Trigger: CCCAGCGGTATGAAAAGGTCACCCTCTGCCACCGTG...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCGTCTCCTCCAGACTaGAGCTTCCTGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFPSPPD*SFLWSL
Trigger: CAGGGACCACAGGAAGCTTCAGTCTGGAGGAGACGG...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTCAGTCAGTTTTATGTaGCCCATGGAGGTGACCAAC +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPSVSFM*PMEVTN
Trigger: GTTGGTCACCTCCATGGGGCACATAAAACTGACTGA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTGGATGGCAACGTTGTaGTTTTGGTCTTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPWMATL*FWSCPQ
Trigger: CTGAGGACAAGACCAAAAGCACAACGTTGCCATCCA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGCGGACTGGCAGATGCTaGAGAAGAGTCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVRTGRC*RRVSAG
Trigger: CCCAGCCGAGACTCTTCTGCAGCATCTGCCAGTCCG...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTCCAGGCCATGGAGGGTaGTGGGCCGGATGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSPGHGG*WAGCAL
Trigger: CAGGGCACATCCGGCCCAGCACCCTCCATGGCCTGG...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTCATCCACAGACTCTTaGCTGCCCACCTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSSSTDS*LPTFRD
Trigger: GTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGGATGA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCTAGAGACTGGCTGTaGTCCCCTGGTGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFPRDWL*SPGVRL
Trigger: CAGCCTGACACCAGGGGAGCACAGCCAGTCTCTAGG...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGCTCTCTGTGACAGTTaGTGGGCTCCTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSALCDS*WAPGRR
Trigger: CCTTCTGCCAGGAGCCCAGCAACTGTCACAGAGAGC...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACTGTCCACTGGACCCTTaGTGCCACCCTTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNCPLDP*CHPCLL
Trigger: GAGAAGGCAAGGGTGGCAGCAAGGGTCCAGTGGACA...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGCATGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGACCGCTCCTCCCGGGTaGGGCAGCGGCAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: CMLVYSIWVQLSICWGQRTAPPG*GSGRVG
Trigger: CCCTACCCTGCCGCTGCCGCACCCGGGAGGAGCGGT...CCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTGGGGGAGAAATTCCTTaGACTGTCTTGAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPGGEIP*TVLRAI
Trigger: AATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCC...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGAGACGGTGGAGCTTaGGGTATTTGTCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTGDGGA*GICPIA
Trigger: GGCTATGGGACAAATACCCCAAGCTCCACCGTCTCC...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTGAGTGTCTCTGTGGATaGCAACGTTGTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPECLCG*QRCAFG
Trigger: ACCAAAAGCACAACGTTGCCATCCACAGAGACACTC...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCAGGGACAGGTTTCTCTaGCTCCTCTCTGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSRDRFL*LLSGVS
Trigger: GGAGACCCCAGAGAGGAGCCAGAGAAACCTGTCCCT...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCTGATGGTGCTGGCTaGGGTGGTGACCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLADGAG*GGDLGL
Trigger: GAGCCCGAGGTCACCACCCCAGCCAGCACCATCAGC...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACACAGAAGAGTCTCGGCTaGGAGAGGAATCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTQKSLG*ERNPVK
Trigger: CTTCACGGGATTCCTCTCCCAGCCGAGACTCTTCTG...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGCCTTCAGTCCTGCCTaGTATGCGGGACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQAFSPA*YAGLPS
Trigger: AGAAGGAAGTCCCGCATACCAGGCAGGACTGAAGGC...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGGCCATGGAGGGTGCTaGGCCGGATGTGCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTGHGGC*AGCALN
Trigger: GTTCAGGGCACATCCGGCCCAGCACCCTCCATGGCC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGTGGGAGAGGGTGTCCTaGCCAGCGGGGAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLWERVS*PAGREG
Trigger: TCCCTCTCTCCCCGCTGGCCAGGACACCCTCTCCCA...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACAGGAGAGGTAGGCTGTaGAGTGGGAGAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNRRGRL*SGRGCP
Trigger: AGGACACCCTCTCCCACTCCACAGCCTACCTCTCCT...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGCGCTGGCCCTCACGCTaGCCTGCTTGTGAAGAGTGT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVRWPSR*PACEEC
Trigger: ACACTCTTCACAAGCAGGCCAGCGTGAGGGCCAGCG...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTAGGTCACCCCCTCGCTaGCCCTCACGCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSRSPPR*PSRWPA
Trigger: AGCAGGCCAGCGTGAGGGCCAGCGAGGGGGTGACCT...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACATTCGAAGGAGCTCTTTaGCCTGAGAGGCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTFEGAL*PERPSP
Trigger: CGGAGAAGGCCTCTCAGGCCAAAGAGCTCCTTCGAA...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTAAAGCAACTCTGTTTTaGAGGCGTGAGGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPKATLF*RREVQT
Trigger: TGTCTGGACCTCACGCCTCCAAAACAGAGTTGCTTT...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCCTCTGTGACAGTTGCTaGGCTCCTGGCAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVALCDSC*APGRRM
Trigger: CATCCTTCTGCCAGGAGCCCAGCAACTGTCACAGAG...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACCCTCAATTCCTGGTaGCTGAGGAGGGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVTLNSW*LRRAPG
Trigger: ACCCGGTGCCCTCCTCAGCCACCAGGAATTGAGGGT...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGGTGGAGAGAAGGGCTaGCCTCTGGCTTGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVGGEKG*PLACSP
Trigger: AGGGCTACAAGCCAGAGGCCAGCCCTTCTCTCCACC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGGGCTGGGGGTGCTCTaGTCGCCTCTCTGCACGCAT +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTGLGVL*SPLCTH
Trigger: ATGCGTGCAGAGAGGCGACCAGAGCACCCCCAGCCC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGGGGCTGGGGGTGCTCTaGTCGCCTCTCTGCACGCAT +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKGLGVL*SPLCTH
Trigger: ATGCGTGCAGAGAGGCGACCAGAGCACCCCCAGCCC...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CACATCGTCTTCTACCCATCTTGCACTGCCAATGCCTCTGTAGCCAGGGACTGCCCGAAACGGCATGGGTaGCGGAGACAGTATGTGGTC +
Preference number: 4 (lower is better)
Translates to: HIVFYPSCTANASVARDCPKRHG*RRQYVV
Trigger: GACCACATACTGTCTCCGCCACCCATGCCGTTTCGG...GCAGTCCCTGGCTACAGAGGCATTGGCAGTGCAAGATGGGTAGAAGACGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR TCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTCGCTGTCGAGCCACGTaGGAAGTGGGTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVRCRAT*EVGSLD
Trigger: ATCCAGTGAACCCACTTCTCACGTGGCTCGACAGCG...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGCCTGAGCTGTGGATaGCAATGGGCTGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVCLSCG*QWADAD
Trigger: GTCCGCATCAGCCCATTGTCATCCACAGCTCAGGCA...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGGGCCGGATGTGCCCTaGACCTGCTGGAGAATTGGG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTGPDVP*TCWRIG
Trigger: CCCAATTCTCCAGCAGGTTCAGGGCACATCCGGCCC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAGGGCCGGATGTGCCCTaGACCTGCTGGAGAATTGGG +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPGPDVP*TCWRIG
Trigger: CCCAATTCTCCAGCAGGTTCAGGGCACATCCGGCCC...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCACGCTGGCCTGCTTGTaGAGAGTGTCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFTLACL*RVSFSR
Trigger: CCTGCTGAAGGACACTCTTCACAAGCAGGCCAGCGT...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGAACCACCCAGGGGTTaGGTGACAGGCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVEPPRG*VTGSLP
Trigger: AGGCAAAGAGCCTGTCACTCAACCCCTGGGTGGTTC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCTCCCCAGTGGTAGCCTaGTGGCTTGGGCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFSPVVA*WLGLLS
Trigger: AGACAGAAGCCCAAGCCATCAGGCTACCACTGGGGA...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCATGGGTGGCCTCTCTaGGCCTCTGAGTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTHGWPL*ASESGL
Trigger: GAGACCGGACTCAGAGGCTCAGAGAGGCCACCCATG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACCTTGGGATGCGCTGCTaGCCTGGGGCACCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYLGMRC*PGAPAA
Trigger: TGCTGCCGGTGCCCCAGGTCAGCAGCGCATCCCAAG...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR TCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGGAGGTACCTCCCTGTaGGGGCTCCTCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYGGTSL*GLLPGS
Trigger: GGAGCCTGGGAGGAGCCCTCACAGGGAGGTACCTCC...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACGCATGGGTGTGTTTCTaGACCGGTTCTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNAWVCF*TGSQWR
Trigger: TCGCCACTGAGAACCGGTGCAGAAACACACCCATGC...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACACTCTCCAGCGGATTCTaGCTGAGGAGCAAGGTAATC +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTLSSGF*LRSKVI
Trigger: GATTACCTTGCTCCTCAGGCAGAATCCGCTGGAGAG...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCCAGTCCTGCCTGGTATaGGGGACTTCCTTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVAQSCLV*GTSFFY
Trigger: GTAGAAGAAGGAAGTCCCGCATACCAGGCAGGACTG...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGCCCGGCCTTCAGTCCTaGCTGGTATGCGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLPGLQS*LVCGTS
Trigger: GGAAGTCCCGCATACCAGGCAGGACTGAAGGCCGGG...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACCCCGGCCTTCAGTCCTaGCTGGTATGCGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNPGLQS*LVCGTS
Trigger: GGAAGTCCCGCATACCAGGCAGGACTGAAGGCCGGG...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCAGTGCTGGGCCGGATGTaGCCTGAACCTGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPVLGRM*PEPAGE
Trigger: TTCTCCAGCAGGTTCAGGGCACATCCGGCCCAGCAC...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTGGAGCGGGGCGGCTCTaGACTCTTGGGCCTCACGAT +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPGAGRL*TLGPHD
Trigger: ATCGTGAGGCCCAAGAGTGCAGAGCCGCCCCGCTCC...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCACCACAGACTCTTGCCTaGCCACCTTCCGGGACACGG +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPPQTLA*PPSGTR
Trigger: CCGTGTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGG...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCTCATCCACAGACTCTTaGCTGCCCACCTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFSSTDS*LPTFRD
Trigger: GTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGGATGA...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTGGTTTGTTTTTGCATaGGCCCATGCTTTCTCCGAA +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPWFVFA*AHAFSE
Trigger: TTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTTGGTTTGTTTTTGCATaGGCCCATGCTTTCTCCGAA +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPWFVFA*AHAFSE
Trigger: TTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCA...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCTTGGGAGCCTGTTTCTaGAAAGAGGGGGCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFLGACF*KEGAAE
Trigger: CTCCGCTGCCCCCTCTTTGCAGAAACAGGCTCCCAA...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGACATAAAGTGCGTCTGTaGATTTCTTTCCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRHKVRL*ISFLLP
Trigger: AGGCAGAAGGAAAGAAATGCACAGACGCACTTTATG...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACATCATACCGCTGGGCTTaGCTGTTTCAGCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTSYRWA*LFQPVT
Trigger: AGTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGA...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCTCATACCGCTGGGCTTaGCTGTTTCAGCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVASYRWA*LFQPVT
Trigger: AGTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGA...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCACTGCTCCTCTTGGGATaGGCTGCTGACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPLLLLG*AADLGH
Trigger: GTGCCCCAGGTCAGCAGCGCATCCCAAGAGGAGCAG...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGTCAAGCTCTTCATCCTaGTCCTCTTGGGATGCGCTG +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQSSSSS*SSWDAL
Trigger: CAGCGCATCCCAAGAGGAGCAGGATGAAGAGCTTGA...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGGCCAAGGGCCTGGCTaGGCATGCGCACGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYGQGPG*ACARGW
Trigger: CCAACCTCGTGCGCATGCGCAGCCAGGCCCTTGGCC...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTTTATTGAGTCCCAGCTaGCTGATGATATACCTAGGG +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPLLSPS*LMIYLG
Trigger: CCCTAGGTATATCATCAGCCAGCTGGGACTCAATAA...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTCCACGAAGGCCTGCTaGATCTGGTTCCGAAGGATG +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSSTKAC*IWFRRM
Trigger: CATCCTTCGGAACCAGATCCAGCAGGCCTTCGTGGA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTCTCTGGCTCCTCTCTaGGGTCTCCAGAGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVSLAPL*GLQSKG
Trigger: TCCCTTGCTCTGGAGACCCCAGAGAGGAGCCAGAGA...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGCCTTCAGTCCTGCCTaGTATGCGGGACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSAFSPA*YAGLPS
Trigger: AGAAGGAAGTCCCGCATACCAGGCAGGACTGAAGGC...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGCTCTCTCAGGCTGGTaGAGTCTCCCTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSALSGW*SLPFSH
Trigger: GTGGGAAAAAGGGAGACTCCACCAGCCTGAGAGAGC...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTCAGTGGAGCGGTCTTaGTGTGTGGCGGGACCACCC +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTSVERS*CVAGPP
Trigger: GGGTGGTCCCGCCACACACCAAGACCGCTCCACTGA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTCAGTGGAGCGGTCTTaGTGTGTGGCGGGACCACCC +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSVERS*CVAGPP
Trigger: GGGTGGTCCCGCCACACACCAAGACCGCTCCACTGA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGGGTTCCTTCAGACATaGCTTCTCCTTTGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSGFLQT*LLLCGR
Trigger: ACGCCCGCAAAGGAGAAGCCATGTCTGAAGGAACCC...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGTCACTTGCTTTGCCCTaGGTGGTCAGGACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQSLALP*VVRTAE
Trigger: TTCTGCTGTCCTGACCACCCAGGGCAAAGCAAGTGA...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGTCACAGTGGATGGTTTaGGATGCTTTGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQSQWMV*DALETG
Trigger: GCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGA...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGAGAAGGGCTGGCCTCTaGCTTGTAGCCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKRRAGL*LVALWG
Trigger: GCCCCAGAGGGCTACAAGCCAGAGGCCAGCCCTTCT...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGTCTCGCACTCCAGGCTaGGCCTCGGGAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKSRTPG*ASGKLA
Trigger: AGCCAGCTTTCCCGAGGCCCAGCCTGGAGTGCGAGA...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTGTGGTCCCTGCTGCTaGGGGCTGGGAACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTCGPCC*GLGTLR
Trigger: CCTCAGAGTTCCCAGCCCCCAGCAGCAGGGACCACA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCATCTGTGCTTGGGGCTaGGGGTGCTCTGGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTICAWG*GCSGRL
Trigger: GAGGCGACCAGAGCACCCCCAGCCCCAAGCACAGAT...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGGAGCGATCTGTGCTTaGGGCTGGGGGTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTGAICA*GWGCSG
Trigger: ACCAGAGCACCCCCAGCCCCAAGCACAGATCGCTCC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTGCAGGAGAAGCGGCTaGGCTCCCCTTCCTCCGACA +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNCRRSG*APLPPT
Trigger: TGTCGGAGGAAGGGGAGCCCAGCCGCTTCTCCTGCA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGGCATGCGCACGAGGTTaGACGTCTCCGCCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKACARG*TSPPKQ
Trigger: CTGCTTCGGCGGAGACGTCCAACCTCGTGCGCATGC...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTAGCGAGGGAGCCGATTaGCCAAGGGCCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFSEGAD*PRAWLR
Trigger: GCGCAGCCAGGCCCTTGGCCAATCGGCTCCCTCGCT...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
3UTR CAA 72 bp TCCCGACCATGTGTGCTGCAGGGGTGGTATCAGGCATaGCTGCTGCCCACAGACCCTTTGACACCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: SRPCVLQGWYQA*LLPTDPLTPFS
Trigger: ACTAAAAGGTGTCAAAGGGTCTGTGGGCAGCAGCAATGCCTGATACCACCCCTGCAGCACACATGGTCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR TCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAAGGTAATCAGCTCCTaGGCGTCTGGAGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPKVISS*ASGGGA
Trigger: GGCCCCTCCTCCAGACGCTCAGGAGCTGATTACCTT...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTTCACTGGATGGCTTTaGGGAATTATCTGTACTGTC +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPFTGWL*GIICTV
Trigger: GACAGTACAGATAATTCCTCAAAGCCATCCAGTGAA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGAGAATTGGGGGCACTTaGACTTGGGGAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVRIGGT*TWGAAL
Trigger: CAGAGCAGCTCCCCAAGTTCAAGTGCCCCCAATTCT...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACGGGGATGGTGAACGCTaGGGAGAGGTAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNGDGER*GEVGCG
Trigger: TCCACAGCCTACCTCTCCTCAGCGTTCACCATCCCC...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCTCTCTCCTCTAGCCTaGAGAGAGCATAGCTTTCCG +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSLSPLA*REHSFP
Trigger: CGGAAAGCTATGCTCTCTTCAGGCTAGAGGAGAGAG...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTGCCCTCGATCGGCTTaGGACATGAAACTGACCTGC +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVCPRSA*DMKLTC
Trigger: GCAGGTCAGTTTCATGTCTCAAGCCGATCGAGGGCA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCTCTGTTTTGGAGGCGTaGGGTCCAGACAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFSVLEA*GPDRRA
Trigger: TGCTCTCCTGTCTGGACCTCACGCCTCCAAAACAGA...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACTCTGTTTTGGAGGCGTaGGGTCCAGACAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYSVLEA*GPDRRA
Trigger: TGCTCTCCTGTCTGGACCTCACGCCTCCAAAACAGA...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTCCTGGCAGAAGGATaGATGAGCTTCCTTTCCGGC +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFLLAEG*MSFLSG
Trigger: GCCGGAAAGGAAGCTCATTCATCCTTCTGCCAGGAG...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGATCGGGGAGTGTCATaGAGGCTGGTGCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVDRGVS*RLVLGS
Trigger: AGAACCAAGCACCAGCCTTCATGACACTCCCCGATC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCGGTCTGCTGCTTCACTaGGATGTCCTTGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFGLLLH*DVLVWV
Trigger: CACCCAGACAAGGACATCTCAGTGAAGCAGCAGACC...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGGTCTGCTGCTTCACTaGGATGTCCTTGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVGLLLH*DVLVWV
Trigger: CACCCAGACAAGGACATCTCAGTGAAGCAGCAGACC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCCGTCTCCTCCAGACTaGAGCTTCCTGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTPSPPD*SFLWSL
Trigger: CAGGGACCACAGGAAGCTTCAGTCTGGAGGAGACGG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AGGTATGGAATTGAAAAGGTGGGGAGGACCTGGGAGGAGGTAAGGAAATTACTGCCTTCAAGCTGGCTGTaGGCGAGGGAGCCGATTGGC +
Preference number: 4 (lower is better)
Translates to: RYGIEKVGRTWEEVRKLLPSSWL*AREPIG
Trigger: GCCAATCGGCTCCCTCGCTCACAGCCAGCTTGAAGG...CAGTAATTTCCTTACCTCCTCCCAGGTCCTCCCCACCTTTTCAATTCCATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR GCA 90 bp GGCACATCTTACAACCACACAGAGACTGACCAAAGGGAACACGGGAGAAATCCTGTGTGGTCGAGGCAGTaGTGGAGACTGGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: GTSYNHTETDQREHGRNPVWSRQ*WRLAIA
Trigger: GGCAATGGCCAGTCTCCAGCACTGCCTCGACCACAC...AGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTGTGTGGTTGTAAGATGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGTCTTCTTGGACTTCTTaGTTCGTCTCACCATCCGGC +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQSSWTS*FVSPSG
Trigger: GCCGGATGGTGAGACGAAGCAAGAAGTCCAAGAAGA...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACGTGCTGGGCCGGATGTaGCCTGAACCTGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNVLGRM*PEPAGE
Trigger: TTCTCCAGCAGGTTCAGGGCACATCCGGCCCAGCAC...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGTCACCTCTAGGCTATaGTTGCGGGAGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVVTSRL*LREHRS
Trigger: GCTTCTGTGCTCCCGCAAGCATAGCCTAGAGGTGAC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCATCATCCACAGACTCTTaGCTGCCCACCTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPSSTDS*LPTFRD
Trigger: GTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGGATGA...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGCCTAGAGACTGGCTGTaGTCCCCTGGTGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLPRDWL*SPGVRL
Trigger: CAGCCTGACACCAGGGGAGCACAGCCAGTCTCTAGG...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTTCTGGCCCAGAGGCTaGGAGAGAGTCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNFWPRG*ERVLES
Trigger: GCTCTCCAGGACTCTCTCGCAGCCTCTGGGCCAGAA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCACCCGACCTTCTCCCTaGACAAGCACATCACTTGCT +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSTRPSP*TSTSLA
Trigger: AGCAAGTGATGTGCTTGTGCAGGGAGAAGGTCGGGT...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGTGGCAGATGAGGGGCTaGTGTTGGCTGCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLWQMRG*CWLQGP
Trigger: AGGTCCCTGCAGCCAACAGCAGCCCCTCATCTGCCA...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGAGGCCAGGCCTGTCCTaGTACCGGGTTTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLRPGLS*YRVWKE
Trigger: CTCCTTCCAAACCCGGTAGCAGGACAGGCCTGGCCT...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTGGCTCTTCGGAGGTTaGCCTTCCTGGAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTWLFGG*PSWSPL
Trigger: GAGAGGGCTCCAGGAAGGGCAACCTCCGAAGAGCCA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTGGTCGAGGCAGTGCTaGAGACTGGCCATTGCCTAT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVWSRQC*RLAIAY
Trigger: ATAGGCAATGGCCAGTCTCCAGCACTGCCTCGACCA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGCTGATGGTGCTGGCTaGGGTGGTGACCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSADGAG*GGDLGL
Trigger: GAGCCCGAGGTCACCACCCCAGCCAGCACCATCAGC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCAACCTGCTGGAGAATTaGGGGCACTTGAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSNLLEN*GHLNLG
Trigger: CCCCAAGTTCAAGTGCCCCCAATTCTCCAGCAGGTT...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGGCCATGGAGGGTGCTaGGCCGGATGTGCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYGHGGC*AGCALN
Trigger: GTTCAGGGCACATCCGGCCCAGCACCCTCCATGGCC...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCTGGGAGAGGGTGTCCTaGCCAGCGGGGAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSWERVS*PAGREG
Trigger: TCCCTCTCTCCCCGCTGGCCAGGACACCCTCTCCCA...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGAAGTCACCTAGAGACTaGCTGTGCTCCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVKSPRD*LCSPGV
Trigger: GACACCAGGGGAGCACAGCCAGTCTCTAGGTGACTT...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAAGTCACCTAGAGACTaGCTGTGCTCCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYKSPRD*LCSPGV
Trigger: GACACCAGGGGAGCACAGCCAGTCTCTAGGTGACTT...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGGCACACACTATCATaGAGAATGCCAGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTGHTLS*RMPEAE
Trigger: CTCAGCTTCTGGCATTCTCCATGATAGTGTGTGCCC...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCTTCGAAGGAGCTCTTTaGCCTGAGAGGCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFFEGAL*PERPSP
Trigger: CGGAGAAGGCCTCTCAGGCCAAAGAGCTCCTTCGAA...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGGGTTCCTTCAGACATaGCTTCTCCTTTGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVGFLQT*LLLCGR
Trigger: ACGCCCGCAAAGGAGAAGCCATGTCTGAAGGAACCC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTAAGCTGAGTCCTCCCTaGCCAGGGACTTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVKLSPP*PGTSPH
Trigger: ATGAGGTGAAGTCCCTGGCCAGGGAGGACTCAGCTT...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACCTCACCCTCAATTCCTaGTGGCTGAGGAGGGCACCG +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNLTLNS*WLRRAP
Trigger: CGGTGCCCTCCTCAGCCACCAGGAATTGAGGGTGAG...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTCAGCCAGTGACTTCTaGGGACCTGGCCCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSASDF*GPGPFP
Trigger: GGGGAAAGGGCCAGGTCCCCAGAAGTCACTGGCTGA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTTGTGGTCCCTGCTGCTaGGGGCTGGGAACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSCGPCC*GLGTLR
Trigger: CCTCAGAGTTCCCAGCCCCCAGCAGCAGGGACCACA...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGCCGAAACGGCATGGGTaGCGGAGACAGTATGTGGTC +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGPKRHG*RRQYVV
Trigger: GACCACATACTGTCTCCGCCACCCATGCCGTTTCGG...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp AGGTATGGAATTGAAAAGGTGGGGAGGACCTGGGAGGAGGTAAGGAAATTACTGGCATGCGCACGAGGTTaGACGTCTCCGCCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RYGIEKVGRTWEEVRKLLACARG*TSPPKQ
Trigger: CTGCTTCGGCGGAGACGTCCAACCTCGTGCGCATGC...CAGTAATTTCCTTACCTCCTCCCAGGTCCTCCCCACCTTTTCAATTCCATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGCATGCGCACGAGGTTaGACGTCTCCGCCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSACARG*TSPPKQ
Trigger: CTGCTTCGGCGGAGACGTCCAACCTCGTGCGCATGC...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
3UTR CAA 72 bp CTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTaGGCAACCAAGGGCAACCAGGCAGATGGTGACGTG +
Preference number: 4 (lower is better)
Translates to: LPFPFLLPSPTG*ATKGNQADGDV
Trigger: CACGTCACCATCTGCCTGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGATTTGTCCCATAGCCTaGGGAAGGGAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVICPIA*GRERSQ
Trigger: CTGGCTTCTCTCCCTTCCTCAGGCTATGGGACAAAT...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGGAGCGGGGCGGGCAATaGCAATTAGGATCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGERGGQ*QLGSFG
Trigger: TCCGAAAGATCCTAATTGTCATTGCCCGCCCCGCTC...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGATTCGGAACTCCAGCTaGGTGTCTCTGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVIRNSS*VSLWMA
Trigger: TGCCATCCACAGAGACACTCAGCTGGAGTTCCGAAT...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCATTCGGAACTCCAGCTaGGTGTCTCTGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFIRNSS*VSLWMA
Trigger: TGCCATCCACAGAGACACTCAGCTGGAGTTCCGAAT...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCGCTGTCGAGCCACGTaGGAAGTGGGTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTRCRAT*EVGSLD
Trigger: ATCCAGTGAACCCACTTCTCACGTGGCTCGACAGCG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCAAGAATTGGGGGCACTTaGACTTGGGGAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPRIGGT*TWGAAL
Trigger: CAGAGCAGCTCCCCAAGTTCAAGTGCCCCCAATTCT...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCACTTGGCATTGCCCAGTaGGTGTCCCAACAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPLGIAQ*VSQQWG
Trigger: TCCCCACTGTTGGGACACTCACTGGGCAATGCCAAG...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACAGTGTCACTTCCCGCTaGCACTGCTCCCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSVTSR*HCSLCT
Trigger: GGTACAGAGGGAGCAGTGTCAGCGGGAAGTGACACT...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCAGTGTCACTTCCCGCTaGCACTGCTCCCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTSVTSR*HCSLCT
Trigger: GGTACAGAGGGAGCAGTGTCAGCGGGAAGTGACACT...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGAGTGTCACTTCCCGCTaGCACTGCTCCCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLSVTSR*HCSLCT
Trigger: GGTACAGAGGGAGCAGTGTCAGCGGGAAGTGACACT...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACCTCTCTCCTCTAGCCTaGAGAGAGCATAGCTTTCCG +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYLSPLA*REHSFP
Trigger: CGGAAAGCTATGCTCTCTTCAGGCTAGAGGAGAGAG...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGAACCACCCAGGGGTTaGGTGACAGGCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTEPPRG*VTGSLP
Trigger: AGGCAAAGAGCCTGTCACTCAACCCCTGGGTGGTTC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTCCCCAGTGGTAGCCTaGTGGCTTGGGCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSPVVA*WLGLLS
Trigger: AGACAGAAGCCCAAGCCATCAGGCTACCACTGGGGA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCATGGGTGGCCTCTCTaGGCCTCTGAGTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSHGWPL*ASESGL
Trigger: GAGACCGGACTCAGAGGCTCAGAGAGGCCACCCATG...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCACACGAAGTCTTTCTCTaGGGAAAGAGGGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPHEVFL*GKREGA
Trigger: CGCTCCCTCCCTCTTTCCTCAGAGAAAGACTTCGTG...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGGAGGTACCTCCCTGTaGGGGCTCCTCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFGGTSL*GLLPGS
Trigger: GGAGCCTGGGAGGAGCCCTCACAGGGAGGTACCTCC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp AGGTATGGAATTGAAAAGGTGGGGAGGACCTGGGAGGAGGTAAGGAAATTACTGGTGTGGTCGAGGCAGTaGTGGAGACTGGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: RYGIEKVGRTWEEVRKLLVWSRQ*WRLAIA
Trigger: GGCAATGGCCAGTCTCCAGCACTGCCTCGACCACAC...CAGTAATTTCCTTACCTCCTCCCAGGTCCTCCCCACCTTTTCAATTCCATACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR GCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGGCATGGGTGTGTTTCTaGACCGGTTCTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGAWVCF*TGSQWR
Trigger: TCGCCACTGAGAACCGGTGCAGAAACACACCCATGC...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCCGGACTGGCAGATGCTaGAGAAGAGTCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIRTGRC*RRVSAG
Trigger: CCCAGCCGAGACTCTTCTGCAGCATCTGCCAGTCCG...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGCACTATCATGGAGAATaGCAGAAGCTGAGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVHYHGE*QKLRPA
Trigger: AGCGGGCCTCAGCTTCTGGCATTCTCCATGATAGTG...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTGGGCTGGGACTCTGTaGAGGCTCTGGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTWAGTL*RLWGKQ
Trigger: TTGCTTTCCCCAGAGCCTGCACAGAGTCCCAGCCCA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAACATTGTGTAGGGTCTaGCCTGGGCCAGGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPTLCRV*PGPGRF
Trigger: GAACCTCCCTGGCCCAGGGCAGACCCTACACAATGT...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGCTACTGCAGTCACTGTaGCCGGCACTGGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLLLQSL*PALVVV
Trigger: CACTACCACCAGTGCCGGGCACAGTGACTGCAGTAG...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGCACATCTTACAACCACACAGAGACTGACCAAAGGGAACACGGGAGAAATCCTTGTCCACTGGACCCTTaGTGCCACCCTTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GTSYNHTETDQREHGRNPCPLDP*CHPCLL
Trigger: GAGAAGGCAAGGGTGGCAGCAAGGGTCCAGTGGACA...AGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTGTGTGGTTGTAAGATGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGTGTCCACTGGACCCTTaGTGCCACCCTTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKCPLDP*CHPCLL
Trigger: GAGAAGGCAAGGGTGGCAGCAAGGGTCCAGTGGACA...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTCACAAGCACATCACTTaGTTTGCCCTGGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVHKHIT*FALGGQ
Trigger: CTGACCACCCAGGGCAAAGCAAGTGATGTGCTTGTG...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCGTGGATGGTTTGGGATaGTTTGGAGACGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFVDGLG*FGDGLC
Trigger: GCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCAC...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCTCATACCGCTGGGCTTaGCTGTTTCAGCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFSYRWA*LFQPVT
Trigger: AGTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGA...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAGATGAGGGGCTaGTGTTGGCTGCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIWQMRG*CWLQGP
Trigger: AGGTCCCTGCAGCCAACAGCAGCCCCTCATCTGCCA...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGTGGTCGAGGCAGTGCTaGAGACTGGCCATTGCCTAT +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGWSRQC*RLAIAY
Trigger: ATAGGCAATGGCCAGTCTCCAGCACTGCCTCGACCA...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACGGCTGGTATGGTAGCTaGTGCAACTTCTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYGWYGS*CNFSWE
Trigger: TTCCCAGGAGAAGTTGCACCAGCTACCATACCAGCC...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACTCATCTGGGGTTGGCTaGTATGGTAGCTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYSSGVG*YGSWCN
Trigger: GTTGCACCAGCTACCATACCAGCCAACCCCAGATGA...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTCATCTGGGGTTGGCTaGTATGGTAGCTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVSSGVG*YGSWCN
Trigger: GTTGCACCAGCTACCATACCAGCCAACCCCAGATGA...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTTCATGGCAAACCTCTaGCGGGACTCTTTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVFMANL*RDSLCR
Trigger: TCGGCACAAAGAGTCCCGCCAGAGGTTTGCCATGAA...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCGAGTGTCTCTGTGGATaGCAACGTTGTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVAECLCG*QRCAFG
Trigger: ACCAAAAGCACAACGTTGCCATCCACAGAGACACTC...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCACAGAAGAGTCTCGGCTaGGAGAGGAATCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPQKSLG*ERNPVK
Trigger: CTTCACGGGATTCCTCTCCCAGCCGAGACTCTTCTG...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATGGGAGAGGGTGTCCTaGCCAGCGGGGAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGWERVS*PAGREG
Trigger: TCCCTCTCTCCCCGCTGGCCAGGACACCCTCTCCCA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCACAGCCTTGCTCCACTaGCCTGGCCCGACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSTALLH*PGPTEG
Trigger: TCCCTCAGTCGGGCCAGGCCAGTGGAGCAAGGCTGT...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCCGCTGGCCCTCACGCTaGCCTGCTTGTGAAGAGTGT +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIRWPSR*PACEEC
Trigger: ACACTCTTCACAAGCAGGCCAGCGTGAGGGCCAGCG...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACATCTTGGGTTTCAGGATaGCACAGTGGCTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTSWVSG*HSGCHL
Trigger: AAGATGACAGCCACTGTGCCATCCTGAAACCCAAGA...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCTCACCCTCAATTCCTaGTGGCTGAGGAGGGCACCG +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLTLNS*WLRRAP
Trigger: CGGTGCCCTCCTCAGCCACCAGGAATTGAGGGTGAG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGGTAGCCTGATGGCTTaGGCTTCTGTCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVGSLMA*ASVCLS
Trigger: AGACAGACAGACAGAAGCCCAAGCCATCAGGCTACC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTAGAAGGGCTGGCCTCTaGCTTGTAGCCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFRRAGL*LVALWG
Trigger: GCCCCAGAGGGCTACAAGCCAGAGGCCAGCCCTTCT...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACACCTTTTCATACCGCTaGGCTTGCCTGTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNTFSYR*ACLFQP
Trigger: TGGCTGAAACAGGCAAGCCCAGCGGTATGAAAAGGT...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCTGTGGTCCCTGCTGCTaGGGGCTGGGAACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSCGPCC*GLGTLR
Trigger: CCTCAGAGTTCCCAGCCCCCAGCAGCAGGGACCACA...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGGCACCTGTGGATCCTaGAAATGTGACTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVGTCGS*KCDSRA
Trigger: TGCTCTGGAGTCACATTTCCAGGATCCACAGGTGCC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGGGCTGGGGGTGCTCTaGTCGCCTCTCTGCACGCAT +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGGLGVL*SPLCTH
Trigger: ATGCGTGCAGAGAGGCGACCAGAGCACCCCCAGCCC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGTCATCCTGCTCCTCTTaGGATGCGCTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLSSCSS*DALLTW
Trigger: CCAGGTCAGCAGCGCATCCCAAGAGGAGCAGGATGA...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGAGGCTCAGCTCCTTCTaGAGCCCTCTCCGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKRLSSF*SPLRLR
Trigger: TCTGAGACGGAGAGGGCTCCAGAAGGAGCTGAGCCT...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194446.7
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGCGAGCTGAGTTGAAATaGCTCTTCGGAGGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVRAELK*LFGGCP
Trigger: AGGGCAACCTCCGAAGAGCCATTTCAACTCAGCTCG...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGGAGCGGGGCGGGCAATaGCAATTAGGATCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKERGGQ*QLGSFG
Trigger: TCCGAAAGATCCTAATTGTCATTGCCCGCCCCGCTC...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTGTGCCCCATGGAGGTaGCCAACAGGTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPCAPWR*PTGCLA
Trigger: AGCCAGACAACCTGTTGGTCACCTCCATGGGGCACA...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTTGCGATCTATACTGCTaGAAACTTTTGAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPCDLYC*KLLKTC
Trigger: ACAGGTTTTCAAAAGTTTTCAGCAGTATAGATCGCA...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACACCTCGGGCTCCTCCTaGGTACACTCCTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYTSGSS*VHSSEG
Trigger: TCCCTCTGAGGAGTGTACTCAGGAGGAGCCCGAGGT...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGTGGATGACAATGGGCTaGTGCGGACTGGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLWMTMG*CGLADA
Trigger: AGCATCTGCCAGTCCGCATCAGCCCATTGTCATCCA...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTGGGGATGGTGAACGCTaGGGAGAGGTAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFGDGER*GEVGCG
Trigger: TCCACAGCCTACCTCTCCTCAGCGTTCACCATCCCC...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCTTGGCATTGCCCAGTaGGTGTCCCAACAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLGIAQ*VSQQWG
Trigger: TCCCCACTGTTGGGACACTCACTGGGCAATGCCAAG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGGCCAGCTAAGGCTTTaGGAGGAACAAAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVGQLRL*EEQRKL
Trigger: CAGTTTCCTTTGTTCCTCTCAAAGCCTTAGCTGGCC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCACATGGTCCCACGTTaGTGCCTGGGCTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSHMVPR*CLGWDS
Trigger: AGAGTCCCAGCCCAGGCATCAACGTGGGACCATGTG...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGGCAGAAGGATGAATaGGCTTCCTTTCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVWQKDE*ASFPAL
Trigger: CAAAGCCGGAAAGGAAGCTCATTCATCCTTCTGCCA...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTGGCAGAAGGATGAATaGGCTTCCTTTCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVWQKDE*ASFPAL
Trigger: CAAAGCCGGAAAGGAAGCTCATTCATCCTTCTGCCA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCAGCACTCAGCTTCTGTaGGGAGAGGGACCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTSTQLL*GEGPVL
Trigger: CAAGACAGGTCCCTCTCCTCACAGAAGCTGAGTGCT...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGCACCCAGGGGTTGAGTaGCAGGCTCTTTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLHPGVE*QALCLL
Trigger: CAAAAGGCAAAGAGCCTGTCACTCAACCCCTGGGTG...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCACCCAGGGGTTGAGTaGCAGGCTCTTTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTHPGVE*QALCLL
Trigger: CAAAAGGCAAAGAGCCTGTCACTCAACCCCTGGGTG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGCACCCAGGGGTTGAGTaGCAGGCTCTTTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKHPGVE*QALCLL
Trigger: CAAAAGGCAAAGAGCCTGTCACTCAACCCCTGGGTG...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAGGTCTGCTGCTTCACTaGGATGTCCTTGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPGLLLH*DVLVWV
Trigger: CACCCAGACAAGGACATCTCAGTGAAGCAGCAGACC...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCCGTCTCCTCCAGACTaGAGCTTCCTGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSPSPPD*SFLWSL
Trigger: CAGGGACCACAGGAAGCTTCAGTCTGGAGGAGACGG...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCACGAAGTCTTTCTCTaGGGAAAGAGGGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTHEVFL*GKREGA
Trigger: CGCTCCCTCCCTCTTTCCTCAGAGAAAGACTTCGTG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GGAAAACCAAGGCAGGTATATAAGACACATGTAGGTCTCAAAAGGTCTAGATTGCTTGGGATGCGCTGCTaGCCTGGGGCACCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GKPRQVYKTHVGLKRSRLLGMRC*PGAPAA
Trigger: TGCTGCCGGTGCCCCAGGTCAGCAGCGCATCCCAAG...CAATCTAGACCTTTTGAGACCTACATGTGTCTTATATACCTGCCTTGGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR GCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAGTGTGGTCGAGGCAGTaGTGGAGACTGGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRVWSRQ*WRLAIA
Trigger: GGCAATGGCCAGTCTCCAGCACTGCCTCGACCACAC...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTCAGTCAGTTTTATGTaGCCCATGGAGGTGACCAAC +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSSVSFM*PMEVTN
Trigger: GTTGGTCACCTCCATGGGGCACATAAAACTGACTGA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTAGCCAGTGCTCTGAAAAACTaGCAACTGACAGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: WPLLAEGSKSSSSEIQVASALKN*QLTVWN
Trigger: GTTCCACACTGTCAGTTGGCAGTTTTTCAGAGCACT...GGCTACCTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGACGGACTGGCAGATGCTaGAGAAGAGTCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRRTGRC*RRVSAG
Trigger: CCCAGCCGAGACTCTTCTGCAGCATCTGCCAGTCCG...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAACCCGGCCTTCAGTCCTaGCTGGTATGCGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEPGLQS*LVCGTS
Trigger: GGAAGTCCCGCATACCAGGCAGGACTGAAGGCCGGG...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTCTTCTTGGACTTCTTaGTTCGTCTCACCATCCGGC +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVSSWTS*FVSPSG
Trigger: GCCGGATGGTGAGACGAAGCAAGAAGTCCAAGAAGA...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGTCACCTCTAGGCTATaGTTGCGGGAGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLVTSRL*LREHRS
Trigger: GCTTCTGTGCTCCCGCAAGCATAGCCTAGAGGTGAC...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGACCACAGACTCTTGCCTaGCCACCTTCCGGGACACGG +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGPQTLA*PPSGTR
Trigger: CCGTGTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGG...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTGTCCTTCAGCAGGCTaGCCACAGAAGGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTCPSAG*PQKATL
Trigger: CAGAGTTGCCTTCTGTGGGCAGCCTGCTGAAGGACA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCCTAGAGACTGGCTGTaGTCCCCTGGTGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSPRDWL*SPGVRL
Trigger: CAGCCTGACACCAGGGGAGCACAGCCAGTCTCTAGG...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCACTCCCTTTTTCCCACTaGTCCCAGGAAGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPLPFSH*SQEELV
Trigger: CACTAGCTCTTCCTGGGAGCAGTGGGAAAAAGGGAG...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTGCTCTCTGTGACAGTTaGTGGGCTCCTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPALCDS*WAPGRR
Trigger: CCTTCTGCCAGGAGCCCAGCAACTGTCACAGAGAGC...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTGTCATGAAGGCTGGTaGTTGGTTCTGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTCHEGW*LVLQRQ
Trigger: CTGCCGCTGCAGAACCAAGCACCAGCCTTCATGACA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCAGGGACCTGTCTTGGTaGTTAGACTTTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFRDLSW*LDFEGL
Trigger: CAGCCCTTCAAAGTCTAAGCACCAAGACAGGTCCCT...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGAGGCTCTTTGCCTTTTaGAGAGCCAGCACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVRLFAF*RASTQL
Trigger: AAGCTGAGTGCTGGCTCTGCAAAAGGCAAAGAGCCT...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGGCACATCACTTGCTTTaGCCTGGGTGGTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKAHHLL*PGWSGQ
Trigger: CTGTCCTGACCACCCAGGGCAAAGCAAGTGATGTGC...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGGCTGCGACATAAAGTaGGTCTGTGCATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSGCDIK*VCAFLS
Trigger: GGAAAGAAATGCACAGACGCACTTTATGTCGCAGCC...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCACCACATCTGGGTTGCTaGATTTCCGAAACGGCATGG +
Preference number: 4 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPPHLGC*ISETAW
Trigger: CCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGG...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCAGGCCAGGCCTGTCCTaGTACCGGGTTTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSRPGLS*YRVWKE
Trigger: CTCCTTCCAAACCCGGTAGCAGGACAGGCCTGGCCT...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp GGAAAACCAAGGCAGGTATATAAGACACATGTAGGTCTCAAAAGGTCTAGATTGGGCCAAGGGCCTGGCTaGGCATGCGCACGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GKPRQVYKTHVGLKRSRLGQGPG*ACARGW
Trigger: CCAACCTCGTGCGCATGCGCAGCCAGGCCCTTGGCC...CAATCTAGACCTTTTGAGACCTACATGTGTCTTATATACCTGCCTTGGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGGGCAGTGCTGGAGACTaGCCATTGCCTATCAAACTC +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGGSAGD*PLPIKL
Trigger: GAGTTTGATAGGCAATGGCCAGTCTCCAGCACTGCC...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGGGGGAGAAATTCCTTaGACTGTCTTGAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSGGEIP*TVLRAI
Trigger: AATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCC...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCACATCTTACAACCACACAGAGACTGACCAAAGGGAACACGGGAGAAATCCTCTCGCAAATGAGAAATaGGCTGAGGCACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GTSYNHTETDQREHGRNPLANEK*AEALGE
Trigger: CTCCCCCAGTGCCTCAGCCCATTTCTCATTTGCGAG...AGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTGTGTGGTTGTAAGATGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCACATCTTACAACCACACAGAGACTGACCAAAGGGAACACGGGAGAAATCCTGGAGACGGTGGAGCTTaGGGTATTTGTCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: GTSYNHTETDQREHGRNPGDGGA*GICPIA
Trigger: GGCTATGGGACAAATACCCCAAGCTCCACCGTCTCC...AGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTGTGTGGTTGTAAGATGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACTGGTGCAACTTCTCCTaGGAAGAACAGGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYWCNFS*EEQDEE
Trigger: CTCCTCATCCTGTTCTTCCCAGGAGAAGTTGCACCA...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTGGCCTTCTTTGGCATaGCCTTCTGCAGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVWPSLA*PSAASN
Trigger: ATTGGAAGCTGCAGAAGGCCATGCCAAAGAAGGCCA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTTCCTTGGCCTTCTTTaGCATGGCCTTCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVFLGLL*HGLLQL
Trigger: AAGCTGCAGAAGGCCATGCCAAAGAAGGCCAAGGAA...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCGGCGAAATACATTCTaGCCATATCAACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSRRNTF*PYQLGE
Trigger: CTCTCCCAGTTGATATGGCCAGAATGTATTTCGCCG...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGCAACGTTGTGCTTTTaGTCTTGTCCTCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTATLCF*SCPQSH
Trigger: ATGACTCTGAGGACAAGACCAAAAGCACAACGTTGC...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCACAGAAGAGTCTCGGCTaGGAGAGGAATCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPQKSLG*ERNPVK
Trigger: CTTCACGGGATTCCTCTCCCAGCCGAGACTCTTCTG...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGGACAAGCTGTGAGTTaGGGAACCCGGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSGQAVS*GTREAL
Trigger: GAGAGCCTCCCGGGTTCCCCAACTCACAGCTTGTCC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGCTTGGGGAGCTGCTCTaGGAGGAATTTGTACCTGAC +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGLGELL*EEFVPD
Trigger: GTCAGGTACAAATTCCTCCCAGAGCAGCTCCCCAAG...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGGGCACACACTATCATaGAGAATGCCAGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVGHTLS*RMPEAE
Trigger: CTCAGCTTCTGGCATTCTCCATGATAGTGTGTGCCC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGAAGCTGAGTCCTCCCTaGCCAGGGACTTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKKLSPP*PGTSPH
Trigger: ATGAGGTGAAGTCCCTGGCCAGGGAGGACTCAGCTT...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCACCCTCAATTCCTaGTGGCTGAGGAGGGCACCG +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSLTLNS*WLRRAP
Trigger: CGGTGCCCTCCTCAGCCACCAGGAATTGAGGGTGAG...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTGGCTTGTAGCCCTCTaGGGCTGCGACATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTWLVAL*GCDIKC
Trigger: GCACTTTATGTCGCAGCCCCAGAGGGCTACAAGCCA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGTGGCTTGTAGCCCTCTaGGGCTGCGACATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKWLVAL*GCDIKC
Trigger: GCACTTTATGTCGCAGCCCCAGAGGGCTACAAGCCA...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGTGGCTTGTAGCCCTCTaGGGCTGCGACATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLWLVAL*GCDIKC
Trigger: GCACTTTATGTCGCAGCCCCAGAGGGCTACAAGCCA...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAACCTTCCCCATGCCCATaGGTGGCCTCTCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEPSPCP*VASLSL
Trigger: GAGGCTCAGAGAGGCCACCCATGGGCATGGGGAAGG...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACCTTTTCATACCGCTaGGCTTGCCTGTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVTFSYR*ACLFQP
Trigger: TGGCTGAAACAGGCAAGCCCAGCGGTATGAAAAGGT...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATCTCGCACTCCAGGCTaGGCCTCGGGAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEESRTPG*ASGKLA
Trigger: AGCCAGCTTTCCCGAGGCCCAGCCTGGAGTGCGAGA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTATTCTGTTTCCTGACTaGGGGAGGCTGGGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPILFPD*GRLGEL
Trigger: GAGCTCGCCCAGCCTCCCCCAGTCAGGAAACAGAAT...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCTGCAGGAGAAGCGGCTaGGCTCCCCTTCCTCCGACA +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFCRRSG*APLPPT
Trigger: TGTCGGAGGAAGGGGAGCCCAGCCGCTTCTCCTGCA...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTCCTGCTACCGGGTTTaGAAGGAGGTACCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSCYRV*KEVPPC
Trigger: ACAGGGAGGTACCTCCTTCCAAACCCGGTAGCAGGA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp GGAAAACCAAGGCAGGTATATAAGACACATGTAGGTCTCAAAAGGTCTAGATTGAGCGAGGGAGCCGATTaGCCAAGGGCCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GKPRQVYKTHVGLKRSRLSEGAD*PRAWLR
Trigger: GCGCAGCCAGGCCCTTGGCCAATCGGCTCCCTCGCT...CAATCTAGACCTTTTGAGACCTACATGTGTCTTATATACCTGCCTTGGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGGAGGTTGCCCTTCCTaGAGCCCTCTCCGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSGGCPS*SPLRLR
Trigger: TCTGAGACGGAGAGGGCTCCAGGAAGGGCAACCTCC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACATTTGTCCCATAGCCTaGGGAAGGGAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNICPIA*GRERSQ
Trigger: CTGGCTTCTCTCCCTTCCTCAGGCTATGGGACAAAT...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAATTTGTCCCATAGCCTaGGGAAGGGAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPICPIA*GRERSQ
Trigger: CTGGCTTCTCTCCCTTCCTCAGGCTATGGGACAAAT...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGATGTGCCCCATGGAGGTaGCCAACAGGTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRCAPWR*PTGCLA
Trigger: AGCCAGACAACCTGTTGGTCACCTCCATGGGGCACA...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCATTCGGAACTCCAGCTaGGTGTCTCTGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTIRNSS*VSLWMA
Trigger: TGCCATCCACAGAGACACTCAGCTGGAGTTCCGAAT...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTTGCCTGAGCTGTGGATaGCAATGGGCTGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFCLSCG*QWADAD
Trigger: GTCCGCATCAGCCCATTGTCATCCACAGCTCAGGCA...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGATGCCTGAGCTGTGGATaGCAATGGGCTGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRCLSCG*QWADAD
Trigger: GTCCGCATCAGCCCATTGTCATCCACAGCTCAGGCA...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACCTTGGCATTGCCCAGTaGGTGTCCCAACAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYLGIAQ*VSQQWG
Trigger: TCCCCACTGTTGGGACACTCACTGGGCAATGCCAAG...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGGGCCAGCTAAGGCTTTaGGAGGAACAAAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGGQLRL*EEQRKL
Trigger: CAGTTTCCTTTGTTCCTCTCAAAGCCTTAGCTGGCC...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTAGCACTCAGCTTCTGTaGGGAGAGGGACCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPSTQLL*GEGPVL
Trigger: CAAGACAGGTCCCTCTCCTCACAGAAGCTGAGTGCT...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATGTAGCCTTGGCAGATaGGGGGCTGCTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGCSLGR*GAAVGC
Trigger: GCAGCCAACAGCAGCCCCTCATCTGCCAAGGCTACA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATGTAGCCTTGGCAGATaGGGGGCTGCTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEECSLGR*GAAVGC
Trigger: GCAGCCAACAGCAGCCCCTCATCTGCCAAGGCTACA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGTGGATCCTGGAAATGTaGCTCCAGAGCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKWILEM*LQSRGG
Trigger: TCCACCTCTGCTCTGGAGTCACATTTCCAGGATCCA...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGGATGTCGAGCTGAGTTaGAATGGCTCTTCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGDVELS*NGSSEV
Trigger: AACCTCCGAAGAGCCATTTCAACTCAGCTCGACATC...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAGTGTGGTCGAGGCAGTaGTGGAGACTGGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEVWSRQ*WRLAIA
Trigger: GGCAATGGCCAGTCTCCAGCACTGCCTCGACCACAC...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTGCATGGGTGTGTTTCTaGACCGGTTCTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPAWVCF*TGSQWR
Trigger: TCGCCACTGAGAACCGGTGCAGAAACACACCCATGC...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGAACAGGAAGAAAACTaGCTTATCTCCACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSEQEEN*LISTVK
Trigger: CTTCACCGTGGAGATAAGGCAGTTTTCTTCCTGTTC...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACTTGAACTTGGGGAGCTaGTCTGGGAGGAATTTGTAC +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYLNLGS*SGRNLY
Trigger: GTACAAATTCCTCCCAGAGCAGCTCCCCAAGTTCAA...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACCACTATCATGGAGAATaGCAGAAGCTGAGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNHYHGE*QKLRPA
Trigger: AGCGGGCCTCAGCTTCTGGCATTCTCCATGATAGTG...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCGACATGAAACTGACCTaGCCTCTAGCTTATACTCGG +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFDMKLT*PLAYTR
Trigger: CCGAGTATAAGCTAGAGGGCAGGTCAGTTTCATGTC...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTACATTGTGTAGGGTCTaGCCTGGGCCAGGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFTLCRV*PGPGRF
Trigger: GAACCTCCCTGGCCCAGGGCAGACCCTACACAATGT...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACTTGGGAGCCTGTTTCTaGAAAGAGGGGGCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYLGACF*KEGAAE
Trigger: CTCCGCTGCCCCCTCTTTGCAGAAACAGGCTCCCAA...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTACTGCAGTCACTGTaGCCGGCACTGGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSLLQSL*PALVVV
Trigger: CACTACCACCAGTGCCGGGCACAGTGACTGCAGTAG...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAGTGGATGGTTTGGGATaGTTTGGAGACGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPVDGLG*FGDGLC
Trigger: GCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCAC...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTCCTGTGGTCCCTGCTaGTGGGGGCTGGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNSCGPC*WGLGTL
Trigger: CAGAGTTCCCAGCCCCCAGCAGCAGGGACCACAGGA...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCATCCTTGCCCCTTCTCTaGCGAACCACGAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPSLPLL*RTTKSF
Trigger: GAAAGACTTCGTGGTTCGGCAGAGAAGGGGCAAGGA...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTCCTTAAGGTCTCCTTaGCCCTTCTCTGCCGAACCA +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSLRSP*PFSAEP
Trigger: TGGTTCGGCAGAGAAGGGGCAAGGAGACCTTAAGGA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCTTTTTGTGAGGACTaGTCCTTAAGGTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFPFCED*SLRSPC
Trigger: GCAAGGAGACCTTAAGGAGCAGTCCTCACAAAAAGG...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGACAACTGCTCCTCTTGGGATaGGCTGCTGACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: CLYTVYGCNLAFVGVRGQLLLLG*AADLGH
Trigger: GTGCCCCAGGTCAGCAGCGCATCCCAAGAGGAGCAG...TTGTCCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR GCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACAGGCCACATCTGGGTTaGTGCATTTCCGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNRPHLG*CISETA
Trigger: TGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCT...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp GGAAAACCAAGGCAGGTATATAAGACACATGTAGGTCTCAAAAGGTCTAGATTGGGGCCTGGCTGCGCATaGGCACGAGGTTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: GKPRQVYKTHVGLKRSRLGPGCA*ARGWTS
Trigger: AGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCC...CAATCTAGACCTTTTGAGACCTACATGTGTCTTATATACCTGCCTTGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACGGCAGTGCTGGAGACTaGCCATTGCCTATCAAACTC +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNGSAGD*PLPIKL
Trigger: GAGTTTGATAGGCAATGGCCAGTCTCCAGCACTGCC...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGAATGGGCTGAGGCACTaGGGGAGAAATTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKNGLRH*GRNSLD
Trigger: GTCCAAGGAATTTCTCCCCCAGTGCCTCAGCCCATT...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAATGGGCTGAGGCACTaGGGGAGAAATTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPNGLRH*GRNSLD
Trigger: GTCCAAGGAATTTCTCCCCCAGTGCCTCAGCCCATT...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGATGAGGAGACGGTaGAGCTTGGGGTATTTGTCC +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPRMRRR*SLGYLS
Trigger: GGACAAATACCCCAAGCTCCACCGTCTCCTCATCCT...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACAGGATGAGGAGACGGTaGAGCTTGGGGTATTTGTCC +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNRMRRR*SLGYLS
Trigger: GGACAAATACCCCAAGCTCCACCGTCTCCTCATCCT...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGAGGATGAGGAGACGGTaGAGCTTGGGGTATTTGTCC +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKRMRRR*SLGYLS
Trigger: GGACAAATACCCCAAGCTCCACCGTCTCCTCATCCT...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACATCATAATTATTTCATaGTCACAGCAGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNIIIIS*SQQAGD
Trigger: GTCCCCCGCCTGCTGTGACCATGAAATAATTATGAT...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGTGGCCTTCTTTGGCATaGCCTTCTGCAGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGWPSLA*PSAASN
Trigger: ATTGGAAGCTGCAGAAGGCCATGCCAAAGAAGGCCA...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTCAGTTTTGATTCCTTaGCCTTCTTTGGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSSVLIP*PSLAWP
Trigger: AGGCCATGCCAAAGAAGGCCAAGGAATCAAAACTGA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTTCATGGCAAACCTCTaGCGGGACTCTTTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTFMANL*RDSLCR
Trigger: TCGGCACAAAGAGTCCCGCCAGAGGTTTGCCATGAA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTCCACGAAGGCCTGCTaGATCTGGTTCCGAAGGATG +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTISTKAC*IWFRRM
Trigger: CATCCTTCGGAACCAGATCCAGCAGGCCTTCGTGGA...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTCTGGCCATATCAACTaGGAGAGGTCCCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSSGHIN*ERSHVF
Trigger: AAAAACATGGGACCTCTCCCAGTTGATATGGCCAGA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTCCTCCGATTCCAGTTaGGGAATAAATTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVSSDSS*GINSAF
Trigger: GAAGGCGGAATTTATTCCCCAACTGGAATCGGAGGA...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGAGTGTCTCTGTGGATaGCAACGTTGTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVECLCG*QRCAFG
Trigger: ACCAAAAGCACAACGTTGCCATCCACAGAGACACTC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACACAGTATCTGAAGAGTTaGAGGTCGATAACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTQYLKS*RSITVA
Trigger: TGCAACAGTTATCGACCTCCAACTCTTCAGATACTG...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAAGGGACAGGTTTCTCTaGCTCCTCTCTGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRRDRFL*LLSGVS
Trigger: GGAGACCCCAGAGAGGAGCCAGAGAAACCTGTCCCT...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGAGCCACGTGAGAAGTaGGTTCACTGGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTEPREK*VHWMAL
Trigger: CAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCTCTTTACGACAACCTTaGCTTTCAGCTTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFSLRQP*LSACPG
Trigger: ACCGGGACAAGCTGAAAGCCAAGGTTGTCGTAAAGA...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACTCTTTACGACAACCTTaGCTTTCAGCTTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYSLRQP*LSACPG
Trigger: ACCGGGACAAGCTGAAAGCCAAGGTTGTCGTAAAGA...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTTCATGTTTCTCTTCTaGTTTCTTTACGACAACCTT +
Preference number: 4 (lower is better)
Translates to: PVPATLGLGLIAMPPELPFMFLF*FLYDNL
Trigger: AAGGTTGTCGTAAAGAAACCAGAAGAGAAACATGAA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCTCTTGGGTTTCAGGATaGCACAGTGGCTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFSWVSG*HSGCHL
Trigger: AAGATGACAGCCACTGTGCCATCCTGAAACCCAAGA...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAACCGGTTTTCAGAGGCTaGCGGGGTCTCTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEPVFRG*RGLLLP
Trigger: GGGCAACAAGAGACCCCGCCAGCCTCTGAAAACCGG...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCACTCTGTGCAGGCTCTaGGGAAAGCAACTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFTLCRL*GKQLCF
Trigger: AAAACAGAGTTGCTTTCCCCAGAGCCTGCACAGAGT...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCGCTCTCTCAGGCTGGTaGAGTCTCCCTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIALSGW*SLPFSH
Trigger: GTGGGAAAAAGGGAGACTCCACCAGCCTGAGAGAGC...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGGTTCCTGGTGTCAGTaGAGCGGTCTTGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYGSWCQ*SGLGVW
Trigger: CCACACACCAAGACCGCTCCACTGACACCAGGAACC...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAACCCTCAATTCCTGGTaGCTGAGGAGGGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEETLNSW*LRRAPG
Trigger: ACCCGGTGCCCTCCTCAGCCACCAGGAATTGAGGGT...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGATGAAGGCTGGTGCTTaGTTCTGCAGCGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLMKAGA*FCSGSF
Trigger: AAAGCTGCCGCTGCAGAACCAAGCACCAGCCTTCAT...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTCACTTGCTTTGCCCTaGGTGGTCAGGACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSLALP*VVRTAE
Trigger: TTCTGCTGTCCTGACCACCCAGGGCAAAGCAAGTGA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCTCACCAGCAATGAGTaGCTTCTGGTCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTLTSNE*LLVCCF
Trigger: GAAGCAGCAGACCAGAAGCCACTCATTGCTGGTGAG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTGGTGGAGAGAAGGGCTaGCCTCTGGCTTGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVGGEKG*PLACSP
Trigger: AGGGCTACAAGCCAGAGGCCAGCCCTTCTCTCCACC...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCCTGGCCCTTTCCCCTTaGGCTCAGAGAAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFLALSP*AQRSPS
Trigger: GGAAGGGCTTCTCTGAGCCCAAGGGGAAAGGGCCAG...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAACTGGCCCTTTCCCCTTaGGCTCAGAGAAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEELALSP*AQRSPS
Trigger: GGAAGGGCTTCTCTGAGCCCAAGGGGAAAGGGCCAG...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTCTGGCCCTTTCCCCTTaGGCTCAGAGAAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVLALSP*AQRSPS
Trigger: GGAAGGGCTTCTCTGAGCCCAAGGGGAAAGGGCCAG...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGACCTTTTCATACCGCTaGGCTTGCCTGTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGTFSYR*ACLFQP
Trigger: TGGCTGAAACAGGCAAGCCCAGCGGTATGAAAAGGT...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCATGAGGGGCTGCTGTTaGCTGCAGGGACCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFMRGCC*LQGPLA
Trigger: TGCGAGAGGTCCCTGCAGCCAACAGCAGCCCCTCAT...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAATGAGGGGCTGCTGTTaGCTGCAGGGACCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGMRGCC*LQGPLA
Trigger: TGCGAGAGGTCCCTGCAGCCAACAGCAGCCCCTCAT...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCTCACTCTTTATCATTTaGCTTCGGCCGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFSLFII*LRPSPP
Trigger: TGGAGGAGACGGCCGAAGCCAAATGATAAAGAGTGA...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGGCACCTGTGGATCCTaGAAATGTGACTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTGTCGS*KCDSRA
Trigger: TGCTCTGGAGTCACATTTCCAGGATCCACAGGTGCC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCTGTAGCCAGGGACTGCCTGCTAGACACTTTTCTTCTTCATATTGCCGTGTTGCCGCAGGCCACATCTaGGTTGCTGCATTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: LCSQGLPARHFSSSYCRVAAGHI*VAAFPK
Trigger: TTTCGGAAATGCAGCAACCCAGATGTGGCCTGCGGC...AACACGGCAATATGAAGAAGAAAAGTGTCTAGCAGGCAGTCCCTGGCTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR TCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAAGACGCTCTTCCATCTaGGCTGTGGCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRRRSSI*AVAFGN
Trigger: GTTCCCAAAGGCCACAGCTCAGATGGAAGAGCGTCT...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCAGACGCTCTTCCATCTaGGCTGTGGCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSRRSSI*AVAFGN
Trigger: GTTCCCAAAGGCCACAGCTCAGATGGAAGAGCGTCT...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCTGGATGACAATGGGCTaGTGCGGACTGGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSWMTMG*CGLADA
Trigger: AGCATCTGCCAGTCCGCATCAGCCCATTGTCATCCA...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGGGGCCGGATGTGCCCTaGACCTGCTGGAGAATTGGG +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQGPDVP*TCWRIG
Trigger: CCCAATTCTCCAGCAGGTTCAGGGCACATCCGGCCC...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGGGGATGGTGAACGCTaGGGAGAGGTAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFGDGER*GEVGCG
Trigger: TCCACAGCCTACCTCTCCTCAGCGTTCACCATCCCC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTGCTAGGAAAGGCCTaGGTGATCTTGGCATTGCCC +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLLGKA*VILALP
Trigger: GGGCAATGCCAAGATCACTCAGGCCTTTCCTAGCAA...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCCTCTCTCCTCTAGCCTaGAGAGAGCATAGCTTTCCG +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTILSPLA*REHSFP
Trigger: CGGAAAGCTATGCTCTCTTCAGGCTAGAGGAGAGAG...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGAGAAGGCAACTCTGCTaGTGTGTTTTCAAAATGGCC +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVRRQLC*CVFKMA
Trigger: GGCCATTTTGAAAACACATCAGCAGAGTTGCCTTCT...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAACGCTGGCCTGCTTGTaGAGAGTGTCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLETLACL*RVSFSR
Trigger: CCTGCTGAAGGACACTCTTCACAAGCAGGCCAGCGT...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTGATCGGGGAGTGTCATaGAGGCTGGTGCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFDRGVS*RLVLGS
Trigger: AGAACCAAGCACCAGCCTTCATGACACTCCCCGATC...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATTGGTGCTTAGACTTTaGAGGGCTGGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEELVLRL*RAGVRA
Trigger: GGCCCTGACCCCAGCCCTTCAAAGTCTAAGCACCAA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAATTGGTGCTTAGACTTTaGAGGGCTGGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLELVLRL*RAGVRA
Trigger: GGCCCTGACCCCAGCCCTTCAAAGTCTAAGCACCAA...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAAGCACTCAGCTTCTGTaGGGAGAGGGACCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRSTQLL*GEGPVL
Trigger: CAAGACAGGTCCCTCTCCTCACAGAAGCTGAGTGCT...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAACCACCCAGGGGTTaGGTGACAGGCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEEPPRG*VTGSLP
Trigger: AGGCAAAGAGCCTGTCACTCAACCCCTGGGTGGTTC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AGGTATGGAATTGAAAAGGTGGGGAGGACCTGGGAGGAGGTAAGGAAATTACTGTCTCTTGTACTTCAGTaGTTTTCCGAGGCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RYGIEKVGRTWEEVRKLLSLVLQ*FSEAAG
Trigger: GCCTGCGGCCTCGGAAAATCACTGAAGTACAAGAGA...CAGTAATTTCCTTACCTCCTCCCAGGTCCTCCCCACCTTTTCAATTCCATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR GCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGTGGTATGGTAGCTGGTaGAACTTCTCCTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGWYGSW*NFSWEE
Trigger: TTCTTCCCAGGAGAAGTTGCACCAGCTACCATACCA...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGAGGTCGATAACTGTTaGATTTCAGAGTATTCGGAA +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQEVDNC*ISEYSE
Trigger: TTCCGAATACTCTGAAATGCAACAGTTATCGACCTC...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGTGCTGGGCCGGATGTaGCCTGAACCTGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFVLGRM*PEPAGE
Trigger: TTCTCCAGCAGGTTCAGGGCACATCCGGCCCAGCAC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTCACTATCATGGAGAATaGCAGAAGCTGAGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSHYHGE*QKLRPA
Trigger: AGCGGGCCTCAGCTTCTGGCATTCTCCATGATAGTG...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCAGACATGAAACTGACCTaGCCTCTAGCTTATACTCGG +
Preference number: 4 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPDMKLT*PLAYTR
Trigger: CCGAGTATAAGCTAGAGGGCAGGTCAGTTTCATGTC...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCTCCCTTTTTCCCACTaGTCCCAGGAAGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLPFSH*SQEELV
Trigger: CACTAGCTCTTCCTGGGAGCAGTGGGAAAAAGGGAG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTTTCTGGCCCAGAGGCTaGGAGAGAGTCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFFWPRG*ERVLES
Trigger: GCTCTCCAGGACTCTCTCGCAGCCTCTGGGCCAGAA...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACTGTCATGAAGGCTGGTaGTTGGTTCTGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYCHEGW*LVLQRQ
Trigger: CTGCCGCTGCAGAACCAAGCACCAGCCTTCATGACA...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAACTACTGCAGTCACTGTaGCCGGCACTGGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEELLQSL*PALVVV
Trigger: CACTACCACCAGTGCCGGGCACAGTGACTGCAGTAG...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTGAGTGGCTTCTGGTCTaGTGCTTCACTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPEWLLV*CFTEMS
Trigger: GGACATCTCAGTGAAGCAGCAGACCAGAAGCCACTC...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTTCTGTCTGTCTGTCTaGACAGACTGGGGTAATCTT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVFCLSV*TDWGNL
Trigger: AAGATTACCCCAGTCTGTGCAGACAGACAGACAGAA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTCCTTGCCCCTTCTCTaGCGAACCACGAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTISLPLL*RTTKSF
Trigger: GAAAGACTTCGTGGTTCGGCAGAGAAGGGGCAAGGA...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCCACATCTGGGTTGCTaGATTTCCGAAACGGCATGG +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPPHLGC*ISETAW
Trigger: CCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTAGGGCCTGGCTGCGCATaGGCACGAGGTTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLGPGCA*ARGWTS
Trigger: AGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCC...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCGCAAATGAGAAATaGGCTGAGGCACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSLANEK*AEALGE
Trigger: CTCCCCCAGTGCCTCAGCCCATTTCTCATTTGCGAG...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGGAGACGGTGGAGCTTaGGGTATTTGTCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSGDGGA*GICPIA
Trigger: GGCTATGGGACAAATACCCCAAGCTCCACCGTCTCC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCATGGTGCAACTTCTCCTaGGAAGAACAGGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPWCNFS*EEQDEE
Trigger: CTCCTCATCCTGTTCTTCCCAGGAGAAGTTGCACCA...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCATCATAATTATTTCATaGTCACAGCAGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFIIIIS*SQQAGD
Trigger: GTCCCCCGCCTGCTGTGACCATGAAATAATTATGAT...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGGGGAGAACATGGTCTaGAGAGTAGCTGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTGENMV*RVAGDD
Trigger: ATCATCACCAGCTACTCTCCAGACCATGTTCTCCCC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACTCAGTTTTGATTCCTTaGCCTTCTTTGGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYSVLIP*PSLAWP
Trigger: AGGCCATGCCAAAGAAGGCCAAGGAATCAAAACTGA...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACTTATTGAGTCCCAGCTaGCTGATGATATACCTAGGG +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYLLSPS*LMIYLG
Trigger: CCCTAGGTATATCATCAGCCAGCTGGGACTCAATAA...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTTCATGGCAAACCTCTaGCGGGACTCTTTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIFMANL*RDSLCR
Trigger: TCGGCACAAAGAGTCCCGCCAGAGGTTTGCCATGAA...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGCGGCGAAATACATTCTaGCCATATCAACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGRRNTF*PYQLGE
Trigger: CTCTCCCAGTTGATATGGCCAGAATGTATTTCGCCG...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCTCTCTGGCTCCTCTCTaGGGTCTCCAGAGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFSLAPL*GLQSKG
Trigger: TCCCTTGCTCTGGAGACCCCAGAGAGGAGCCAGAGA...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATCTCTGGCTCCTCTCTaGGGTCTCCAGAGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEESLAPL*GLQSKG
Trigger: TCCCTTGCTCTGGAGACCCCAGAGAGGAGCCAGAGA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATCTCTGGCTCCTCTCTaGGGTCTCCAGAGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGSLAPL*GLQSKG
Trigger: TCCCTTGCTCTGGAGACCCCAGAGAGGAGCCAGAGA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAAGGGACAGGTTTCTCTaGCTCCTCTCTGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLERDRFL*LLSGVS
Trigger: GGAGACCCCAGAGAGGAGCCAGAGAAACCTGTCCCT...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTGAGCCACGTGAGAAGTaGGTTCACTGGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPEPREK*VHWMAL
Trigger: CAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTC...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACAGCGAACATATCTCCTaGGATCATGAGGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSEHIS*DHEGQS
Trigger: GCTCTGTCCCTCATGATCCCAGGAGATATGTTCGCT...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACGACTCTCCTTCTTCTTaGACTTCTTGCTTCGTCTCA +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYDSPSS*TSCFVS
Trigger: TGAGACGAAGCAAGAAGTCCAAGAAGAAGGAGAGTC...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTCTTGGGGAGCTGCTCTaGGAGGAATTTGTACCTGAC +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSLGELL*EEFVPD
Trigger: GTCAGGTACAAATTCCTCCCAGAGCAGCTCCCCAAG...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCTTGGGGAGCTGCTCTaGGAGGAATTTGTACCTGAC +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLGELL*EEFVPD
Trigger: GTCAGGTACAAATTCCTCCCAGAGCAGCTCCCCAAG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGGAGAGGTAGGCTGTaGAGTGGGAGAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGRRGRL*SGRGCP
Trigger: AGGACACCCTCTCCCACTCCACAGCCTACCTCTCCT...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCAGGCCTATCAGAGATaGGGCACACACTATCATGGA +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTQAYQR*GTHYHG
Trigger: TCCATGATAGTGTGTGCCCCATCTCTGATAGGCCTG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCACAGGCCTATCAGAGATaGGGCACACACTATCATGGA +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPQAYQR*GTHYHG
Trigger: TCCATGATAGTGTGTGCCCCATCTCTGATAGGCCTG...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTCCCACGTTGATGCCTaGGCTGGGACTCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNSHVDA*AGTLCR
Trigger: CCTGCACAGAGTCCCAGCCCAGGCATCAACGTGGGA...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGCTGCGAGAGAGTCCTaGAGAGCCCGGCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECAARES*RARLGG
Trigger: ACCCCCGAGCCGGGCTCTCCAGGACTCTCTCGCAGC...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAGGTTCCTGGTGTCAGTaGAGCGGTCTTGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEGSWCQ*SGLGVW
Trigger: CCACACACCAAGACCGCTCCACTGACACCAGGAACC...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTGTTTGGAACTGTCGCTaGCTTTACCAGTCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPVWNCR*LYQSLP
Trigger: CGGCAGAGACTGGTAAAGCCAGCGACAGTTCCAAAC...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTCCTGTCTGGCTCTTTaGGAGCCTGTTTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTSCLAL*EPVSAK
Trigger: CTTTGCAGAAACAGGCTCCCAAAGAGCCAGACAGGA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAACAGCTCTTTGGTGGGTaGGGGTTGTTGAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEQLFGG*GLLRAT
Trigger: AGTGGCCCTCAACAACCCCCACCCACCAAAGAGCTG...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTCAGCTCTTTGGTGGGTaGGGGTTGTTGAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVQLFGG*GLLRAT
Trigger: AGTGGCCCTCAACAACCCCCACCCACCAAAGAGCTG...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTATGAAGGCTGGTGCTTaGTTCTGCAGCGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPMKAGA*FCSGSF
Trigger: AAAGCTGCCGCTGCAGAACCAAGCACCAGCCTTCAT...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTCAGCCAGTGACTTCTaGGGACCTGGCCCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNSASDF*GPGPFP
Trigger: GGGGAAAGGGCCAGGTCCCCAGAAGTCACTGGCTGA...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTTCAGCCAGTGACTTCTaGGGACCTGGCCCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFSASDF*GPGPFP
Trigger: GGGGAAAGGGCCAGGTCCCCAGAAGTCACTGGCTGA...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAACGAGCTCTCTCCCTTTaGGTTCTCCTGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEERALSL*VLLWQQ
Trigger: CTGCTGCCACAGGAGAACCCAAAGGGAGAGAGCTCG...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTCGAGCTCTCTCCCTTTaGGTTCTCCTGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVRALSL*VLLWQQ
Trigger: CTGCTGCCACAGGAGAACCCAAAGGGAGAGAGCTCG...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTATTCTGTTTCCTGACTaGGGGAGGCTGGGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVILFPD*GRLGEL
Trigger: GAGCTCGCCCAGCCTCCCCCAGTCAGGAAACAGAAT...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGATTTCCGAAACGGCATaGGTGGCGGAGACAGTATGT +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLISETA*VAETVC
Trigger: ACATACTGTCTCCGCCACCCATGCCGTTTCGGAAAT...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTGCCGCAGGCCACATCTaGGTTGCTGCATTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFAAGHI*VAAFPK
Trigger: TTTCGGAAATGCAGCAACCCAGATGTGGCCTGCGGC...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR TCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTGTGCCCCATGGAGGTaGCCAACAGGTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNCAPWR*PTGCLA
Trigger: AGCCAGACAACCTGTTGGTCACCTCCATGGGGCACA...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGAAGGTAATCAGCTCCTaGGCGTCTGGAGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQKVISS*ASGGGA
Trigger: GGCCCCTCCTCCAGACGCTCAGGAGCTGATTACCTT...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCAAGAAGGCAACTCTGCTaGTGTGTTTTCAAAATGGCC +
Preference number: 4 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPRRQLC*CVFKMA
Trigger: GGCCATTTTGAAAACACATCAGCAGAGTTGCCTTCT...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGAGAATGCCAGAAGCTaGGGCCCGCTTAAAGTCACC +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGENARS*GPLKVT
Trigger: GGTGACTTTAAGCGGGCCTCAGCTTCTGGCATTCTC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAGAGAATGCCAGAAGCTaGGGCCCGCTTAAAGTCACC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEENARS*GPLKVT
Trigger: GGTGACTTTAAGCGGGCCTCAGCTTCTGGCATTCTC...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAGAATGCCAGAAGCTaGGGCCCGCTTAAAGTCACC +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEENARS*GPLKVT
Trigger: GGTGACTTTAAGCGGGCCTCAGCTTCTGGCATTCTC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAAGGAGCTCTTTGGCCTaGGAGGCCTTCTCCGAGTAT +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLERSSLA*EAFSEY
Trigger: ATACTCGGAGAAGGCCTCTCAGGCCAAAGAGCTCCT...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGGAGCTCTTTGGCCTaGGAGGCCTTCTCCGAGTAT +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEERSSLA*EAFSEY
Trigger: ATACTCGGAGAAGGCCTCTCAGGCCAAAGAGCTCCT...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAATGCCCTCGATCGGCTTaGGACATGAAACTGACCTGC +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLECPRSA*DMKLTC
Trigger: GCAGGTCAGTTTCATGTCTCAAGCCGATCGAGGGCA...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAACTCCTGGCAGAAGGATaGATGAGCTTCCTTTCCGGC +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLELLAEG*MSFLSG
Trigger: GCCGGAAAGGAAGCTCATTCATCCTTCTGCCAGGAG...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGAAGATTGCTCTCTGTaGCAGTTGCTGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGEDCSL*QLLGSW
Trigger: CCAGGAGCCCAGCAACTGTCACAGAGAGCAATCTTC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCCACCCTCTTTCTGCTaGAGATTGCTCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPPPSFC*RLLSVT
Trigger: TGTCACAGAGAGCAATCTTCAGCAGAAAGAGGGTGG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGATCGGGGAGTGTCATaGAGGCTGGTGCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEDRGVS*RLVLGS
Trigger: AGAACCAAGCACCAGCCTTCATGACACTCCCCGATC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGACTGCCGATGTCGAGCTaGGTTGAAATGGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGLPMSS*VEMALR
Trigger: CCGAAGAGCCATTTCAACTCAGCTCGACATCGGCAG...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTGGTATGGTAGCTGGTaGAACTTCTCCTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTWYGSW*NFSWEE
Trigger: TTCTTCCCAGGAGAAGTTGCACCAGCTACCATACCA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTGCATGGGTGTGTTTCTaGACCGGTTCTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVAWVCF*TGSQWR
Trigger: TCGCCACTGAGAACCGGTGCAGAAACACACCCATGC...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGATCTTTCGGACTAGTTaGTTGATAAATGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQIFRTS*LINASS
Trigger: AGAACTGGCATTTATCAAGCAACTAGTCCGAAAGAT...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACCTCTCCAGCGGATTCTaGCTGAGGAGCAAGGTAATC +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYLSSGF*LRSKVI
Trigger: GATTACCTTGCTCCTCAGGCAGAATCCGCTGGAGAG...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCTCCAGCGGATTCTaGCTGAGGAGCAAGGTAATC +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSLSSGF*LRSKVI
Trigger: GATTACCTTGCTCCTCAGGCAGAATCCGCTGGAGAG...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTCTTCTTGGACTTCTTaGTTCGTCTCACCATCCGGC +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTISSWTS*FVSPSG
Trigger: GCCGGATGGTGAGACGAAGCAAGAAGTCCAAGAAGA...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGGGAGCGGGGCGGCTCTaGACTCTTGGGCCTCACGAT +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKGAGRL*TLGPHD
Trigger: ATCGTGAGGCCCAAGAGTGCAGAGCCGCCCCGCTCC...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAGTCACCTCTAGGCTATaGTTGCGGGAGCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEVTSRL*LREHRS
Trigger: GCTTCTGTGCTCCCGCAAGCATAGCCTAGAGGTGAC...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATACCACAGACTCTTGCCTaGCCACCTTCCGGGACACGG +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIPQTLA*PPSGTR
Trigger: CCGTGTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGG...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTTGTCCTTCAGCAGGCTaGCCACAGAAGGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVCPSAG*PQKATL
Trigger: CAGAGTTGCCTTCTGTGGGCAGCCTGCTGAAGGACA...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGGACATGAAACTGACCTaGCCTCTAGCTTATACTCGG +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKDMKLT*PLAYTR
Trigger: CCGAGTATAAGCTAGAGGGCAGGTCAGTTTCATGTC...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACCTCCCTTTTTCCCACTaGTCCCAGGAAGAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYLPFSH*SQEELV
Trigger: CACTAGCTCTTCCTGGGAGCAGTGGGAAAAAGGGAG...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGCTCTCTGTGACAGTTaGTGGGCTCCTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFALCDS*WAPGRR
Trigger: CCTTCTGCCAGGAGCCCAGCAACTGTCACAGAGAGC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTACATTGTGTAGGGTCTaGCCTGGGCCAGGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFTLCRV*PGPGRF
Trigger: GAACCTCCCTGGCCCAGGGCAGACCCTACACAATGT...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGGGAGCCTGTTTCTaGAAAGAGGGGGCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNLGACF*KEGAAE
Trigger: CTCCGCTGCCCCCTCTTTGCAGAAACAGGCTCCCAA...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCGCACATCACTTGCTTTaGCCTGGGTGGTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFAHHLL*PGWSGQ
Trigger: CTGTCCTGACCACCCAGGGCAAAGCAAGTGATGTGC...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAGAGTGGCTTCTGGTCTaGTGCTTCACTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELREWLLV*CFTEMS
Trigger: GGACATCTCAGTGAAGCAGCAGACCAGAAGCCACTC...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGTTCTGTCTGTCTGTCTaGACAGACTGGGGTAATCTT +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGFCLSV*TDWGNL
Trigger: AAGATTACCCCAGTCTGTGCAGACAGACAGACAGAA...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGAAAACCAAGGCAGGTATATAAGACACATGTAGGTCTCAAAAGGTCTAGATTGAGGCCAGGCCTGTCCTaGTACCGGGTTTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GKPRQVYKTHVGLKRSRLRPGLS*YRVWKE
Trigger: CTCCTTCCAAACCCGGTAGCAGGACAGGCCTGGCCT...CAATCTAGACCTTTTGAGACCTACATGTGTCTTATATACCTGCCTTGGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp GGCACATCTTACAACCACACAGAGACTGACCAAAGGGAACACGGGAGAAATCCTGGGGGAGAAATTCCTTaGACTGTCTTGAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: GTSYNHTETDQREHGRNPGGEIP*TVLRAI
Trigger: AATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCC...AGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTGTGTGGTTGTAAGATGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGGCTGGTATGGTAGCTaGTGCAACTTCTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSGWYGS*CNFSWE
Trigger: TTCCCAGGAGAAGTTGCACCAGCTACCATACCAGCC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGATCATCTGGGGTTGGCTaGTATGGTAGCTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRSSGVG*YGSWCN
Trigger: GTTGCACCAGCTACCATACCAGCCAACCCCAGATGA...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTTTCCTTGGCCTTCTTTaGCATGGCCTTCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSFLGLL*HGLLQL
Trigger: AAGCTGCAGAAGGCCATGCCAAAGAAGGCCAAGGAA...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTTCCACGAAGGCCTGCTaGATCTGGTTCCGAAGGATG +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVSTKAC*IWFRRM
Trigger: CATCCTTCGGAACCAGATCCAGCAGGCCTTCGTGGA...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCATCCTCCGATTCCAGTTaGGGAATAAATTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPSSDSS*GINSAF
Trigger: GAAGGCGGAATTTATTCCCCAACTGGAATCGGAGGA...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACCAGTATCTGAAGAGTTaGAGGTCGATAACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYQYLKS*RSITVA
Trigger: TGCAACAGTTATCGACCTCCAACTCTTCAGATACTG...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACGAGAAGTGGGTTCACTaGATGGCTTTGAGGAATTAT +
Preference number: 4 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYEKWVH*MALRNY
Trigger: ATAATTCCTCAAAGCCATCCAGTGAACCCACTTCTC...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTAACCTGCTGGAGAATTaGGGGCACTTGAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFNLLEN*GHLNLG
Trigger: CCCCAAGTTCAAGTGCCCCCAATTCTCCAGCAGGTT...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATTCGAAGGAGCTCTTTaGCCTGAGAGGCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGFEGAL*PERPSP
Trigger: CGGAGAAGGCCTCTCAGGCCAAAGAGCTCCTTCGAA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTCTTGGGTTTCAGGATaGCACAGTGGCTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTSWVSG*HSGCHL
Trigger: AAGATGACAGCCACTGTGCCATCCTGAAACCCAAGA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGCCGGTTTTCAGAGGCTaGCGGGGTCTCTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQPVFRG*RGLLLP
Trigger: GGGCAACAAGAGACCCCGCCAGCCTCTGAAAACCGG...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGAAAGCAACTCTGTTTTaGAGGCGTGAGGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLKATLF*RREVQT
Trigger: TGTCTGGACCTCACGCCTCCAAAACAGAGTTGCTTT...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACATATTTACTTTTAAGTTaGCTGAGGAAGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTYLLLS*LRKALS
Trigger: TGAGAGAGCCTTCCTCAGCCAACTTAAAAGTAAATA...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTAGAAAATGTGTCCACTaGACCCTTGCTGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSRKCVH*TLAATL
Trigger: AAGGGTGGCAGCAAGGGTCCAGTGGACACATTTTCT...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTGCTTTGCCCTGGGTaGTCAGGACAGCAGAAAATG +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLLCPG*SGQQKM
Trigger: CATTTTCTGCTGTCCTGACCACCCAGGGCAAAGCAA...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTCACTCTTTATCATTTaGCTTCGGCCGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTSLFII*LRPSPP
Trigger: TGGAGGAGACGGCCGAAGCCAAATGATAAAGAGTGA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTCACTCTTTATCATTTaGCTTCGGCCGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSLFII*LRPSPP
Trigger: TGGAGGAGACGGCCGAAGCCAAATGATAAAGAGTGA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAATTCTGTTTCCTGACTaGGGGAGGCTGGGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKILFPD*GRLGEL
Trigger: GAGCTCGCCCAGCCTCCCCCAGTCAGGAAACAGAAT...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTAATCTGTGCTTGGGGCTaGGGGTGCTCTGGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLICAWG*GCSGRL
Trigger: GAGGCGACCAGAGCACCCCCAGCCCCAAGCACAGAT...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTAGGAGCGATCTGTGCTTaGGGCTGGGGGTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLGAICA*GWGCSG
Trigger: ACCAGAGCACCCCCAGCCCCAAGCACAGATCGCTCC...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGACAATCATCCTGCTCCTCTTaGGATGCGCTGCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: CLYTVYGCNLAFVGVRGQSSCSS*DALLTW
Trigger: CCAGGTCAGCAGCGCATCCCAAGAGGAGCAGGATGA...TTGTCCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp AGGTATGGAATTGAAAAGGTGGGGAGGACCTGGGAGGAGGTAAGGAAATTACTGATTTCCGAAACGGCATaGGTGGCGGAGACAGTATGT +
Preference number: 4 (lower is better)
Translates to: RYGIEKVGRTWEEVRKLLISETA*VAETVC
Trigger: ACATACTGTCTCCGCCACCCATGCCGTTTCGGAAAT...CAGTAATTTCCTTACCTCCTCCCAGGTCCTCCCCACCTTTTCAATTCCATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGCCGCAGGCCACATCTaGGTTGCTGCATTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGAAGHI*VAAFPK
Trigger: TTTCGGAAATGCAGCAACCCAGATGTGGCCTGCGGC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCAAGCAATTCCACTTCTaGGAATCTACCAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFKQFHF*ESTRLP
Trigger: AGGAAGTCTGGTAGATTCCCAGAAGTGGAATTGCTT...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194446.7
CDS-3UTR TCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTAGACGCTCTTCCATCTaGGCTGTGGCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFRRSSI*AVAFGN
Trigger: GTTCCCAAAGGCCACAGCTCAGATGGAAGAGCGTCT...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGTGATGAGACCCTGGTaGGATTTATCCAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSVMRPW*DLSKQS
Trigger: GGACTGTTTGGATAAATCTCACCAGGGTCTCATCAC...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTGTGATGAGACCCTGGTaGGATTTATCCAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPVMRPW*DLSKQS
Trigger: GGACTGTTTGGATAAATCTCACCAGGGTCTCATCAC...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCGTGATGAGACCCTGGTaGGATTTATCCAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIVMRPW*DLSKQS
Trigger: GGACTGTTTGGATAAATCTCACCAGGGTCTCATCAC...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATAAAGGTAATCAGCTCCTaGGCGTCTGGAGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIKVISS*ASGGGA
Trigger: GGCCCCTCCTCCAGACGCTCAGGAGCTGATTACCTT...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACATCTTTGTCTTCTCCTaGATTTTGAGTTATGCGATC +
Preference number: 4 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNIFVFS*ILSYAI
Trigger: GATCGCATAACTCAAAATTCAGGAGAAGACAAAGAT...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCATTCGGAACTCCAGCTaGGTGTCTCTGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFIRNSS*VSLWMA
Trigger: TGCCATCCACAGAGACACTCAGCTGGAGTTCCGAAT...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCATTCACTGGATGGCTTTaGGGAATTATCTGTACTGTC +
Preference number: 4 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPFTGWL*GIICTV
Trigger: GACAGTACAGATAATTCCTCAAAGCCATCCAGTGAA...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGAGAAGGCAACTCTGCTaGTGTGTTTTCAAAATGGCC +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKRRQLC*CVFKMA
Trigger: GGCCATTTTGAAAACACATCAGCAGAGTTGCCTTCT...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATACACATGGTCCCACGTTaGTGCCTGGGCTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIHMVPR*CLGWDS
Trigger: AGAGTCCCAGCCCAGGCATCAACGTGGGACCATGTG...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGAAGATTGCTCTCTGTaGCAGTTGCTGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFEDCSL*QLLGSW
Trigger: CCAGGAGCCCAGCAACTGTCACAGAGAGCAATCTTC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCATGGGTGGCCTCTCTaGGCCTCTGAGTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKHGWPL*ASESGL
Trigger: GAGACCGGACTCAGAGGCTCAGAGAGGCCACCCATG...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATACACGGTGGCAGAGGGTaGCCTTTTCATACCGCTGGG +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIHGGRG*PFHTAG
Trigger: CCCAGCGGTATGAAAAGGTCACCCTCTGCCACCGTG...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCTTCAAGCTGGCTGTaGGCGAGGGAGCCGATTGGC +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKPSSWL*AREPIG
Trigger: GCCAATCGGCTCCCTCGCTCACAGCCAGCTTGAAGG...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTTGGTATGGTAGCTGGTaGAACTTCTCCTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSWYGSW*NFSWEE
Trigger: TTCTTCCCAGGAGAAGTTGCACCAGCTACCATACCA...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTCTCTCCAGCGGATTCTaGCTGAGGAGCAAGGTAATC +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVLSSGF*LRSKVI
Trigger: GATTACCTTGCTCCTCAGGCAGAATCCGCTGGAGAG...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTTGGATGGCAACGTTGTaGTTTTGGTCTTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSWMATL*FWSCPQ
Trigger: CTGAGGACAAGACCAAAAGCACAACGTTGCCATCCA...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGAGTGCTCTGAAAAACTaGCAACTGACAGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLSALKN*QLTVWN
Trigger: GTTCCACACTGTCAGTTGGCAGTTTTTCAGAGCACT...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATACGGACTGGCAGATGCTaGAGAAGAGTCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIRTGRC*RRVSAG
Trigger: CCCAGCCGAGACTCTTCTGCAGCATCTGCCAGTCCG...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTAGCAAAGGAGAAGGCTaGTTGGCCAGCTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFSKGEG*LASFLK
Trigger: CTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTTGCT...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTGAACTTGGGGAGCTaGTCTGGGAGGAATTTGTAC +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLNLGS*SGRNLY
Trigger: GTACAAATTCCTCCCAGAGCAGCTCCCCAAGTTCAA...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACAGGGACCTGTCTTGGTaGTTAGACTTTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYRDLSW*LDFEGL
Trigger: CAGCCCTTCAAAGTCTAAGCACCAAGACAGGTCCCT...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAAGGCTCTTTGCCTTTTaGAGAGCCAGCACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRRLFAF*RASTQL
Trigger: AAGCTGAGTGCTGGCTCTGCAAAAGGCAAAGAGCCT...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGCTTCCTGTGGTCCCTaGTGCTGGGGGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECASCGP*CWGLGT
Trigger: AGTTCCCAGCCCCCAGCAGCAGGGACCACAGGAAGC...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATCCTTGCCCCTTCTCTaGCGAACCACGAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEESLPLL*RTTKSF
Trigger: GAAAGACTTCGTGGTTCGGCAGAGAAGGGGCAAGGA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCTCCTTAAGGTCTCCTTaGCCCTTCTCTGCCGAACCA +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFSLRSP*PFSAEP
Trigger: TGGTTCGGCAGAGAAGGGGCAAGGAGACCTTAAGGA...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATCCTTAAGGTCTCCTTaGCCCTTCTCTGCCGAACCA +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEESLRSP*PFSAEP
Trigger: TGGTTCGGCAGAGAAGGGGCAAGGAGACCTTAAGGA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TGCATGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGTCAAGCTCTTCATCCTaGTCCTCTTGGGATGCGCTG +
Preference number: 4 (lower is better)
Translates to: CMLVYSIWVQLSICWGQRSSSSS*SSWDAL
Trigger: CAGCGCATCCCAAGAGGAGCAGGATGAAGAGCTTGA...CCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR GCA 90 bp TGCATGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGCCACATCTGGGTTGCTaGATTTCCGAAACGGCATGG +
Preference number: 4 (lower is better)
Translates to: CMLVYSIWVQLSICWGQRPHLGC*ISETAW
Trigger: CCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGG...CCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR GCA 90 bp TGCATGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGAGGCCACATCTGGGTTaGTGCATTTCCGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: CMLVYSIWVQLSICWGQRRPHLG*CISETA
Trigger: TGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCT...CCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGGCAGTGCTGGAGACTaGCCATTGCCTATCAAACTC +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGGSAGD*PLPIKL
Trigger: GAGTTTGATAGGCAATGGCCAGTCTCCAGCACTGCC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACCTCGCAAATGAGAAATaGGCTGAGGCACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNLANEK*AEALGE
Trigger: CTCCCCCAGTGCCTCAGCCCATTTCTCATTTGCGAG...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGATCATAATTATTTCATaGTCACAGCAGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLIIIIS*SQQAGD
Trigger: GTCCCCCGCCTGCTGTGACCATGAAATAATTATGAT...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCCTGAGCTGTGGCCTTTaGGAACCTTTCTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTILSCGL*EPFFVD
Trigger: GTCTACAAAGAAAGGTTCCCAAAGGCCACAGCTCAG...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCTGAGCTGTGGCCTTTaGGAACCTTTCTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLSCGL*EPFFVD
Trigger: GTCTACAAAGAAAGGTTCCCAAAGGCCACAGCTCAG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCTTCCATCTGAGCTGTaGCCTTTGGGAACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLPSEL*PLGTFL
Trigger: AAGAAAGGTTCCCAAAGGCCACAGCTCAGATGGAAG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAGGGGAGAACATGGTCTaGAGAGTAGCTGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRGENMV*RVAGDD
Trigger: ATCATCACCAGCTACTCTCCAGACCATGTTCTCCCC...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACTTCCTTGGCCTTCTTTaGCATGGCCTTCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYFLGLL*HGLLQL
Trigger: AAGCTGCAGAAGGCCATGCCAAAGAAGGCCAAGGAA...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTCAGTTTTGATTCCTTaGCCTTCTTTGGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNSVLIP*PSLAWP
Trigger: AGGCCATGCCAAAGAAGGCCAAGGAATCAAAACTGA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTTATTGAGTCCCAGCTaGCTGATGATATACCTAGGG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTLLSPS*LMIYLG
Trigger: CCCTAGGTATATCATCAGCCAGCTGGGACTCAATAA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCATCTGGCCATATCAACTaGGAGAGGTCCCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPSGHIN*ERSHVF
Trigger: AAAAACATGGGACCTCTCCCAGTTGATATGGCCAGA...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTCTGGCCATATCAACTaGGAGAGGTCCCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTSGHIN*ERSHVF
Trigger: AAAAACATGGGACCTCTCCCAGTTGATATGGCCAGA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCCGGCGAAATACATTCTaGCCATATCAACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIRRNTF*PYQLGE
Trigger: CTCTCCCAGTTGATATGGCCAGAATGTATTTCGCCG...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCGGCGAAATACATTCTaGCCATATCAACTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPRRNTF*PYQLGE
Trigger: CTCTCCCAGTTGATATGGCCAGAATGTATTTCGCCG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTCCTCCGATTCCAGTTaGGGAATAAATTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPSSDSS*GINSAF
Trigger: GAAGGCGGAATTTATTCCCCAACTGGAATCGGAGGA...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACAGCGAACATATCTCCTaGGATCATGAGGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYSEHIS*DHEGQS
Trigger: GCTCTGTCCCTCATGATCCCAGGAGATATGTTCGCT...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACGCCTTCAGTCCTGCCTaGTATGCGGGACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNAFSPA*YAGLPS
Trigger: AGAAGGAAGTCCCGCATACCAGGCAGGACTGAAGGC...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCACATCTTACAACCACACAGAGACTGACCAAAGGGAACACGGGAGAAATCCTGACTCTCCTTCTTCTTaGACTTCTTGCTTCGTCTCA +
Preference number: 4 (lower is better)
Translates to: GTSYNHTETDQREHGRNPDSPSS*TSCFVS
Trigger: TGAGACGAAGCAAGAAGTCCAAGAAGAAGGAGAGTC...AGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTGTGTGGTTGTAAGATGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGGACTCTCCTTCTTCTTaGACTTCTTGCTTCGTCTCA +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKDSPSS*TSCFVS
Trigger: TGAGACGAAGCAAGAAGTCCAAGAAGAAGGAGAGTC...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGACAGCCTTGCTCCACTaGCCTGGCCCGACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKTALLH*PGPTEG
Trigger: TCCCTCAGTCGGGCCAGGCCAGTGGAGCAAGGCTGT...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGGATGTGTTTTCAAAATaGCCTGACCTTTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKDVFSK*PDLSNP
Trigger: GGGGTTGGAAAGGTCAGGCCATTTTGAAAACACATC...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTACCGGTTTTCAGAGGCTaGCGGGGTCTCTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLPVFRG*RGLLLP
Trigger: GGGCAACAAGAGACCCCGCCAGCCTCTGAAAACCGG...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGGGTTCCTTCAGACATaGCTTCTCCTTTGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFGFLQT*LLLCGR
Trigger: ACGCCCGCAAAGGAGAAGCCATGTCTGAAGGAACCC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGTTTGGAACTGTCGCTaGCTTTACCAGTCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGVWNCR*LYQSLP
Trigger: CGGCAGAGACTGGTAAAGCCAGCGACAGTTCCAAAC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGTTTGGAACTGTCGCTaGCTTTACCAGTCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEVWNCR*LYQSLP
Trigger: CGGCAGAGACTGGTAAAGCCAGCGACAGTTCCAAAC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAATGAAGGCTGGTGCTTaGTTCTGCAGCGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGMKAGA*FCSGSF
Trigger: AAAGCTGCCGCTGCAGAACCAAGCACCAGCCTTCAT...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATCACTTGCTTTGCCCTaGGTGGTCAGGACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGSLALP*VVRTAE
Trigger: TTCTGCTGTCCTGACCACCCAGGGCAAAGCAAGTGA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTGGTAGCCTGATGGCTTaGGCTTCTGTCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVGSLMA*ASVCLS
Trigger: AGACAGACAGACAGAAGCCCAAGCCATCAGGCTACC...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCGGTAGCCTGATGGCTTaGGCTTCTGTCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFGSLMA*ASVCLS
Trigger: AGACAGACAGACAGAAGCCCAAGCCATCAGGCTACC...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCTTCCCCATGCCCATaGGTGGCCTCTCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKPSPCP*VASLSL
Trigger: GAGGCTCAGAGAGGCCACCCATGGGCATGGGGAAGG...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAATTTGTCCCATAGCCTaGGGAAGGGAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKICPIA*GRERSQ
Trigger: CTGGCTTCTCTCCCTTCCTCAGGCTATGGGACAAAT...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTACTGGGAAGAACAGGATaGGGAGACGGTGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLLGRTG*GDGGAW
Trigger: CCAAGCTCCACCGTCTCCTCATCCTGTTCTTCCCAG...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTACCTCGGGCTCCTCCTaGGTACACTCCTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECTSGSS*VHSSEG
Trigger: TCCCTCTGAGGAGTGTACTCAGGAGGAGCCCGAGGT...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCTTCGCCCATTTATCTaGTCCAAGTGCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTLRPFI*SKCSEK
Trigger: TTTTTCAGAGCACTTGGATCAGATAAATGGGCGAAG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACTGGCTGGTCCCGTTTTaGTTGATGTGTTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNWLVPF*LMCFQM
Trigger: CATTTGAAAACACATCAATCAAAACGGGACCAGCCA...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTGGCTGGTCCCGTTTTaGTTGATGTGTTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTWLVPF*LMCFQM
Trigger: CATTTGAAAACACATCAATCAAAACGGGACCAGCCA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGAGAATTGGGGGCACTTaGACTTGGGGAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQRIGGT*TWGAAL
Trigger: CAGAGCAGCTCCCCAAGTTCAAGTGCCCCCAATTCT...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGGCCAGCTAAGGCTTTaGGAGGAACAAAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGGQLRL*EEQRKL
Trigger: CAGTTTCCTTTGTTCCTCTCAAAGCCTTAGCTGGCC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTTCTCTTGTACTTCAGTaGTTTTCCGAGGCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFSLVLQ*FSEAAG
Trigger: GCCTGCGGCCTCGGAAAATCACTGAAGTACAAGAGA...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000167058.8
CDS-3UTR GCA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGATACTTTCTGTTGTaGAGAAGTGTTTGGATAAGA +
Preference number: 4 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFRYFLL*RSVWIR
Trigger: TCTTATCCAAACACTTCTGCACAACAGAAAGTATCG...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGAACAGGAAGAAAACTaGCTTATCTCCACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSEQEEN*LISTVK
Trigger: CTTCACCGTGGAGATAAGGCAGTTTTCTTCCTGTTC...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTTGGATGGCAACGTTGTaGTTTTGGTCTTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFWMATL*FWSCPQ
Trigger: CTGAGGACAAGACCAAAAGCACAACGTTGCCATCCA...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAACAGTCCTGCCTGGTATaGGGGACTTCCTTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKQSCLV*GTSFFY
Trigger: GTAGAAGAAGGAAGTCCCGCATACCAGGCAGGACTG...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTCAGTCCTGCCTGGTATaGGGGACTTCCTTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFQSCLV*GTSFFY
Trigger: GTAGAAGAAGGAAGTCCCGCATACCAGGCAGGACTG...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAAGCAAAGGAGAAGGCTaGTTGGCCAGCTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLESKGEG*LASFLK
Trigger: CTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTTGCT...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACTTGAACTTGGGGAGCTaGTCTGGGAGGAATTTGTAC +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYLNLGS*SGRNLY
Trigger: GTACAAATTCCTCCCAGAGCAGCTCCCCAAGTTCAA...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGCAATATTGGCCAGCTTaGTGTCTAGTTTTTCACTTC +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGQYWPA*CLVFHF
Trigger: GAAGTGAAAAACTAGACAGCAAGCTGGCCAATATTG...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTTTCTGGCCCAGAGGCTaGGAGAGAGTCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECFWPRG*ERVLES
Trigger: GCTCTCCAGGACTCTCTCGCAGCCTCTGGGCCAGAA...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGGCACATCACTTGCTTTaGCCTGGGTGGTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQAHHLL*PGWSGQ
Trigger: CTGTCCTGACCACCCAGGGCAAAGCAAGTGATGTGC...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGTGGATGGTTTGGGATaGTTTGGAGACGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFVDGLG*FGDGLC
Trigger: GCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCAC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGGCTGCGACATAAAGTaGGTCTGTGCATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSGCDIK*VCAFLS
Trigger: GGAAAGAAATGCACAGACGCACTTTATGTCGCAGCC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACCCTTTTTGTGAGGACTaGTCCTTAAGGTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYPFCED*SLRSPC
Trigger: GCAAGGAGACCTTAAGGAGCAGTCCTCACAAAAAGG...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGACAAGGCAGTGCTGGAGACTaGCCATTGCCTATCAAACTC +
Preference number: 4 (lower is better)
Translates to: CLYTVYGCNLAFVGVRGQGSAGD*PLPIKL
Trigger: GAGTTTGATAGGCAATGGCCAGTCTCCAGCACTGCC...TTGTCCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp GGAAAACCAAGGCAGGTATATAAGACACATGTAGGTCTCAAAAGGTCTAGATTGTGGTCGAGGCAGTGCTaGAGACTGGCCATTGCCTAT +
Preference number: 4 (lower is better)
Translates to: GKPRQVYKTHVGLKRSRLWSRQC*RLAIAY
Trigger: ATAGGCAATGGCCAGTCTCCAGCACTGCCTCGACCA...CAATCTAGACCTTTTGAGACCTACATGTGTCTTATATACCTGCCTTGGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTAATGGGCTGAGGCACTaGGGGAGAAATTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFNGLRH*GRNSLD
Trigger: GTCCAAGGAATTTCTCCCCCAGTGCCTCAGCCCATT...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAATGGTGCAACTTCTCCTaGGAAGAACAGGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEWCNFS*EEQDEE
Trigger: CTCCTCATCCTGTTCTTCCCAGGAGAAGTTGCACCA...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAGGCTGGTATGGTAGCTaGTGCAACTTCTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKGWYGS*CNFSWE
Trigger: TTCCCAGGAGAAGTTGCACCAGCTACCATACCAGCC...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTCTTCCATCTGAGCTGTaGCCTTTGGGAACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFLPSEL*PLGTFL
Trigger: AAGAAAGGTTCCCAAAGGCCACAGCTCAGATGGAAG...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTGGGGAGAACATGGTCTaGAGAGTAGCTGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVGENMV*RVAGDD
Trigger: ATCATCACCAGCTACTCTCCAGACCATGTTCTCCCC...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATTCCTTGGCCTTCTTTaGCATGGCCTTCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEFLGLL*HGLLQL
Trigger: AAGCTGCAGAAGGCCATGCCAAAGAAGGCCAAGGAA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCGCAACGTTGTGCTTTTaGTCTTGTCCTCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIATLCF*SCPQSH
Trigger: ATGACTCTGAGGACAAGACCAAAAGCACAACGTTGC...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAGAGTGTCTCTGTGGATaGCAACGTTGTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRECLCG*QRCAFG
Trigger: ACCAAAAGCACAACGTTGCCATCCACAGAGACACTC...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCAGTATCTGAAGAGTTaGAGGTCGATAACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTQYLKS*RSITVA
Trigger: TGCAACAGTTATCGACCTCCAACTCTTCAGATACTG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGGAGAAGTGGGTTCACTaGATGGCTTTGAGGAATTAT +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKEKWVH*MALRNY
Trigger: ATAATTCCTCAAAGCCATCCAGTGAACCCACTTCTC...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTTCTTTACGACAACCTTaGCTTTCAGCTTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFSLRQP*LSACPG
Trigger: ACCGGGACAAGCTGAAAGCCAAGGTTGTCGTAAAGA...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCGGGCACACACTATCATaGAGAATGCCAGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFGHTLS*RMPEAE
Trigger: CTCAGCTTCTGGCATTCTCCATGATAGTGTGTGCCC...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGACAGGCCTATCAGAGATaGGGCACACACTATCATGGA +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGQAYQR*GTHYHG
Trigger: TCCATGATAGTGTGTGCCCCATCTCTGATAGGCCTG...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTCTTGGCTATCTTTGTaGTTTGTTTTTGCATGCGCC +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTSWLSL*FVFACA
Trigger: GGCGCATGCAAAAACAAACCACAAAGATAGCCAAGA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATTGCTTTGCCCTGGGTaGTCAGGACAGCAGAAAATG +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGLLCPG*SGQQKM
Trigger: CATTTTCTGCTGTCCTGACCACCCAGGGCAAAGCAA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGGGGACACCCTCCATTaGTGTTTTTCAGTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYGDTLH*CFSVWH
Trigger: ATGCCAAACTGAAAAACACCAATGGAGGGTGTCCCC...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACCTCACCAGCAATGAGTaGCTTCTGGTCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNLTSNE*LLVCCF
Trigger: GAAGCAGCAGACCAGAAGCCACTCATTGCTGGTGAG...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTTCACAGTGGATGGTTTaGGATGCTTTGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFSQWMV*DALETG
Trigger: GCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGA...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAATCACAGTGGATGGTTTaGGATGCTTTGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKSQWMV*DALETG
Trigger: GCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGA...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAGGCACCTGTGGATCCTaGAAATGTGACTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKGTCGS*KCDSRA
Trigger: TGCTCTGGAGTCACATTTCCAGGATCCACAGGTGCC...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATACGAGCTCTCTCCCTTTaGGTTCTCCTGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIRALSL*VLLWQQ
Trigger: CTGCTGCCACAGGAGAACCCAAAGGGAGAGAGCTCG...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAATTTCCGAAACGGCATaGGTGGCGGAGACAGTATGT +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGISETA*VAETVC
Trigger: ACATACTGTCTCCGCCACCCATGCCGTTTCGGAAAT...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167058.8
CDS-3UTR CCA 90 bp GGAAAACCAAGGCAGGTATATAAGACACATGTAGGTCTCAAAAGGTCTAGATTGTCCTGCTACCGGGTTTaGAAGGAGGTACCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GKPRQVYKTHVGLKRSRLSCYRV*KEVPPC
Trigger: ACAGGGAGGTACCTCCTTCCAAACCCGGTAGCAGGA...CAATCTAGACCTTTTGAGACCTACATGTGTCTTATATACCTGCCTTGGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR TCA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACCCGAGAGGGACTTTGTaGCTTTCCCAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYPRGTL*LSQKFS
Trigger: AGAAAATTTCTGGGAAAGTCACAAAGTCCCTCTCGG...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTTGGCTGGTCCCGTTTTaGTTGATGTGTTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSWLVPF*LMCFQM
Trigger: CATTTGAAAACACATCAATCAAAACGGGACCAGCCA...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAACCACCCTCTTTCTGCTaGAGATTGCTCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKPPSFC*RLLSVT
Trigger: TGTCACAGAGAGCAATCTTCAGCAGAAAGAGGGTGG...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTACACGAAGTCTTTCTCTaGGGAAAGAGGGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLHEVFL*GKREGA
Trigger: CGCTCCCTCCCTCTTTCCTCAGAGAAAGACTTCGTG...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGATCTTTCGGACTAGTTaGTTGATAAATGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGIFRTS*LINASS
Trigger: AGAACTGGCATTTATCAAGCAACTAGTCCGAAAGAT...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCTCAGTCAGTTTTATGTaGCCCATGGAGGTGACCAAC +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFSVSFM*PMEVTN
Trigger: GTTGGTCACCTCCATGGGGCACATAAAACTGACTGA...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATGGATGGCAACGTTGTaGTTTTGGTCTTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGWMATL*FWSCPQ
Trigger: CTGAGGACAAGACCAAAAGCACAACGTTGCCATCCA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTCTTCTTGGACTTCTTaGTTCGTCTCACCATCCGGC +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNSSWTS*FVSPSG
Trigger: GCCGGATGGTGAGACGAAGCAAGAAGTCCAAGAAGA...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGACCCGACCTTCTCCCTaGACAAGCACATCACTTGCT +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQTRPSP*TSTSLA
Trigger: AGCAAGTGATGTGCTTGTGCAGGGAGAAGGTCGGGT...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGGAGTGGCTTCTGGTCTaGTGCTTCACTGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQEWLLV*CFTEMS
Trigger: GGACATCTCAGTGAAGCAGCAGACCAGAAGCCACTC...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCATAAAGTGCGTCTGTaGATTTCTTTCCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPHKVRL*ISFLLP
Trigger: AGGCAGAAGGAAAGAAATGCACAGACGCACTTTATG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCCATAAAGTGCGTCTGTaGATTTCTTTCCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIHKVRL*ISFLLP
Trigger: AGGCAGAAGGAAAGAAATGCACAGACGCACTTTATG...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTGGCTGCGACATAAAGTaGGTCTGTGCATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVGCDIK*VCAFLS
Trigger: GGAAAGAAATGCACAGACGCACTTTATGTCGCAGCC...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGGGCAGTGCTGGAGACTaGCCATTGCCTATCAAACTC +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQGSAGD*PLPIKL
Trigger: GAGTTTGATAGGCAATGGCCAGTCTCCAGCACTGCC...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTATGGTCGAGGCAGTGCTaGAGACTGGCCATTGCCTAT +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLWSRQC*RLAIAY
Trigger: ATAGGCAATGGCCAGTCTCCAGCACTGCCTCGACCA...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATATGGTCGAGGCAGTGCTaGAGACTGGCCATTGCCTAT +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIWSRQC*RLAIAY
Trigger: ATAGGCAATGGCCAGTCTCCAGCACTGCCTCGACCA...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGAATGGGCTGAGGCACTaGGGGAGAAATTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQNGLRH*GRNSLD
Trigger: GTCCAAGGAATTTCTCCCCCAGTGCCTCAGCCCATT...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGGGGAGAACATGGTCTaGAGAGTAGCTGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFGENMV*RVAGDD
Trigger: ATCATCACCAGCTACTCTCCAGACCATGTTCTCCCC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGATCAGTTTTGATTCCTTaGCCTTCTTTGGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRSVLIP*PSLAWP
Trigger: AGGCCATGCCAAAGAAGGCCAAGGAATCAAAACTGA...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGATCTGGCCATATCAACTaGGAGAGGTCCCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRSGHIN*ERSHVF
Trigger: AAAAACATGGGACCTCTCCCAGTTGATATGGCCAGA...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGCTTCATAGAGATTGGTaGTCATGCTCATTAATCCCA +
Preference number: 4 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKLHRDW*SCSLIP
Trigger: TGGGATTAATGAGCATGACCACCAATCTCTATGAAG...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTCAGTATCTGAAGAGTTaGAGGTCGATAACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSQYLKS*RSITVA
Trigger: TGCAACAGTTATCGACCTCCAACTCTTCAGATACTG...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTAGCGAACATATCTCCTaGGATCATGAGGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFSEHIS*DHEGQS
Trigger: GCTCTGTCCCTCATGATCCCAGGAGATATGTTCGCT...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTTCATGTTTCTCTTCTaGTTTCTTTACGACAACCTT +
Preference number: 4 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVFMFLF*FLYDNL
Trigger: AAGGTTGTCGTAAAGAAACCAGAAGAGAAACATGAA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAAAGCAACTCTGTTTTaGAGGCGTGAGGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEKATLF*RREVQT
Trigger: TGTCTGGACCTCACGCCTCCAAAACAGAGTTGCTTT...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAACTCTGTGCAGGCTCTaGGGAAAGCAACTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLETLCRL*GKQLCF
Trigger: AAAACAGAGTTGCTTTCCCCAGAGCCTGCACAGAGT...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTAGCTCTCTCAGGCTGGTaGAGTCTCCCTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLALSGW*SLPFSH
Trigger: GTGGGAAAAAGGGAGACTCCACCAGCCTGAGAGAGC...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGTATTTACTTTTAAGTTaGCTGAGGAAGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGYLLLS*LRKALS
Trigger: TGAGAGAGCCTTCCTCAGCCAACTTAAAAGTAAATA...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAGACTTCACCTCATCTTaGCTATCTTTGTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPDFTSS*LSLWFV
Trigger: AACAAACCACAAAGATAGCCAAGATGAGGTGAAGTC...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTCTGTTCCTTCCTGTCTaGCTCTTTGGGAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFLFLPV*LFGSLF
Trigger: AAACAGGCTCCCAAAGAGCCAGACAGGAAGGAACAG...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTAGAAAATGTGTCCACTaGACCCTTGCTGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFRKCVH*TLAATL
Trigger: AAGGGTGGCAGCAAGGGTCCAGTGGACACATTTTCT...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGGGGACACCCTCCATTaGTGTTTTTCAGTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGGDTLH*CFSVWH
Trigger: ATGCCAAACTGAAAAACACCAATGGAGGGTGTCCCC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTATCTTTCACAGTGGATaGTTTGGGATGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPIFHSG*FGMLWR
Trigger: TCTCCAAAGCATCCCAAACCATCCACTGTGAAAGAT...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTAGACGCTCTTCCATCTaGGCTGTGGCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECRRSSI*AVAFGN
Trigger: GTTCCCAAAGGCCACAGCTCAGATGGAAGAGCGTCT...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAACCGAGAGGGACTTTGTaGCTTTCCCAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEPRGTL*LSQKFS
Trigger: AGAAAATTTCTGGGAAAGTCACAAAGTCCCTCTCGG...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAATGGTATGGTAGCTGGTaGAACTTCTCCTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKWYGSW*NFSWEE
Trigger: TTCTTCCCAGGAGAAGTTGCACCAGCTACCATACCA...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGATCTTTCGGACTAGTTaGTTGATAAATGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLIFRTS*LINASS
Trigger: AGAACTGGCATTTATCAAGCAACTAGTCCGAAAGAT...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAATCAGTCAGTTTTATGTaGCCCATGGAGGTGACCAAC +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKSVSFM*PMEVTN
Trigger: GTTGGTCACCTCCATGGGGCACATAAAACTGACTGA...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAACAGGAAGAAAACTaGCTTATCTCCACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEEQEEN*LISTVK
Trigger: CTTCACCGTGGAGATAAGGCAGTTTTCTTCCTGTTC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTGCTCTGAAAAACTaGCAACTGACAGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEESALKN*QLTVWN
Trigger: GTTCCACACTGTCAGTTGGCAGTTTTTCAGAGCACT...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTACAGTCCTGCCTGGTATaGGGGACTTCCTTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLQSCLV*GTSFFY
Trigger: GTAGAAGAAGGAAGTCCCGCATACCAGGCAGGACTG...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATGGTTTGTTTTTGCATaGGCCCATGCTTTCTCCGAA +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEWFVFA*AHAFSE
Trigger: TTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTTGTCATGAAGGCTGGTaGTTGGTTCTGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECCHEGW*LVLQRQ
Trigger: CTGCCGCTGCAGAACCAAGCACCAGCCTTCATGACA...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGGGTCCACTAGTCTCTaGCGATGTCGAGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECGSTSL*RCRAEL
Trigger: CAACTCAGCTCGACATCGGCAGAGACTAGTGGACCC...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTATCATCTGGGGTTGGCTaGTATGGTAGCTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLSSGVG*YGSWCN
Trigger: GTTGCACCAGCTACCATACCAGCCAACCCCAGATGA...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATATTCATGGCAAACCTCTaGCGGGACTCTTTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIFMANL*RDSLCR
Trigger: TCGGCACAAAGAGTCCCGCCAGAGGTTTGCCATGAA...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGCAACGTTGTGCTTTTaGTCTTGTCCTCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGATLCF*SCPQSH
Trigger: ATGACTCTGAGGACAAGACCAAAAGCACAACGTTGC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTAAGTCACCTAGAGACTaGCTGTGCTCCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECKSPRD*LCSPGV
Trigger: GACACCAGGGGAGCACAGCCAGTCTCTAGGTGACTT...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTATTTACTTTTAAGTTaGCTGAGGAAGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTYLLLS*LRKALS
Trigger: TGAGAGAGCCTTCCTCAGCCAACTTAAAAGTAAATA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTCTCTGTGACAGTTGCTaGGCTCCTGGCAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECLCDSC*APGRRM
Trigger: CATCCTTCTGCCAGGAGCCCAGCAACTGTCACAGAG...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGATCTTGGCTATCTTTGTaGTTTGTTTTTGCATGCGCC +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRSWLSL*FVFACA
Trigger: GGCGCATGCAAAAACAAACCACAAAGATAGCCAAGA...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCGACTTCACCTCATCTTaGCTATCTTTGTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIDFTSS*LSLWFV
Trigger: AACAAACCACAAAGATAGCCAAGATGAGGTGAAGTC...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATACTCACCAGCAATGAGTaGCTTCTGGTCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHILTSNE*LLVCCF
Trigger: GAAGCAGCAGACCAGAAGCCACTCATTGCTGGTGAG...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTATCTTTCACAGTGGATaGTTTGGGATGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFIFHSG*FGMLWR
Trigger: TCTCCAAAGCATCCCAAACCATCCACTGTGAAAGAT...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGGTGATGAGACCCTGGTaGGATTTATCCAAACAGTCC +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQVMRPW*DLSKQS
Trigger: GGACTGTTTGGATAAATCTCACCAGGGTCTCATCAC...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTCCGAGAGGGACTTTGTaGCTTTCCCAGAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFPRGTL*LSQKFS
Trigger: AGAAAATTTCTGGGAAAGTCACAAAGTCCCTCTCGG...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTTTGCTAGGAAAGGCCTaGGTGATCTTGGCATTGCCC +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECLLGKA*VILALP
Trigger: GGGCAATGCCAAGATCACTCAGGCCTTTCCTAGCAA...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCCGATACTTTCTGTTGTaGAGAAGTGTTTGGATAAGA +
Preference number: 4 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIRYFLL*RSVWIR
Trigger: TCTTATCCAAACACTTCTGCACAACAGAAAGTATCG...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTATCTTTCGGACTAGTTaGTTGATAAATGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LATVLPVTTGKASGRKFPIFRTS*LINASS
Trigger: AGAACTGGCATTTATCAAGCAACTAGTCCGAAAGAT...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGAGGTCGATAACTGTTaGATTTCAGAGTATTCGGAA +
Preference number: 4 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSEVDNC*ISEYSE
Trigger: TTCCGAATACTCTGAAATGCAACAGTTATCGACCTC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTTTCTGTCTGTCTGTCTaGACAGACTGGGGTAATCTT +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFFCLSV*TDWGNL
Trigger: AAGATTACCCCAGTCTGTGCAGACAGACAGACAGAA...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGCTGAGCTGTGGCCTTTaGGAACCTTTCTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQLSCGL*EPFFVD
Trigger: GTCTACAAAGAAAGGTTCCCAAAGGCCACAGCTCAG...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGACTTCATAGAGATTGGTaGTCATGCTCATTAATCCCA +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRLHRDW*SCSLIP
Trigger: TGGGATTAATGAGCATGACCACCAATCTCTATGAAG...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGCAACGTTGTGCTTTTaGTCTTGTCCTCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFATLCF*SCPQSH
Trigger: ATGACTCTGAGGACAAGACCAAAAGCACAACGTTGC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCGAGAAGTGGGTTCACTaGATGGCTTTGAGGAATTAT +
Preference number: 4 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFEKWVH*MALRNY
Trigger: ATAATTCCTCAAAGCCATCCAGTGAACCCACTTCTC...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGACTCTCCTTCTTCTTaGACTTCTTGCTTCGTCTCA +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFDSPSS*TSCFVS
Trigger: TGAGACGAAGCAAGAAGTCCAAGAAGAAGGAGAGTC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGACTCTGTGCAGGCTCTaGGGAAAGCAACTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQTLCRL*GKQLCF
Trigger: AAAACAGAGTTGCTTTCCCCAGAGCCTGCACAGAGT...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAATCTTGGCTATCTTTGTaGTTTGTTTTTGCATGCGCC +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLESWLSL*FVFACA
Trigger: GGCGCATGCAAAAACAAACCACAAAGATAGCCAAGA...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTATCCTGTCTGGCTCTTTaGGAGCCTGTTTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLSCLAL*EPVSAK
Trigger: CTTTGCAGAAACAGGCTCCCAAAGAGCCAGACAGGA...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATAAGAAAATGTGTCCACTaGACCCTTGCTGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIRKCVH*TLAATL
Trigger: AAGGGTGGCAGCAAGGGTCCAGTGGACACATTTTCT...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTATCTTTCACAGTGGATaGTTTGGGATGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVIFHSG*FGMLWR
Trigger: TCTCCAAAGCATCCCAAACCATCCACTGTGAAAGAT...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGATGCGATCTATACTGCTaGAAACTTTTGAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRCDLYC*KLLKTC
Trigger: ACAGGTTTTCAAAAGTTTTCAGCAGTATAGATCGCA...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAATTCACTGGATGGCTTTaGGGAATTATCTGTACTGTC +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKFTGWL*GIICTV
Trigger: GACAGTACAGATAATTCCTCAAAGCCATCCAGTGAA...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCACCCTCTTTCTGCTaGAGATTGCTCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKPPSFC*RLLSVT
Trigger: TGTCACAGAGAGCAATCTTCAGCAGAAAGAGGGTGG...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGACGATACTTTCTGTTGTaGAGAAGTGTTTGGATAAGA +
Preference number: 4 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRRYFLL*RSVWIR
Trigger: TCTTATCCAAACACTTCTGCACAACAGAAAGTATCG...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTGAGGTCGATAACTGTTaGATTTCAGAGTATTCGGAA +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVEVDNC*ISEYSE
Trigger: TTCCGAATACTCTGAAATGCAACAGTTATCGACCTC...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGACAATATTGGCCAGCTTaGTGTCTAGTTTTTCACTTC +
Preference number: 4 (lower is better)
Translates to: YKHYLATVLPVTTGKASGQYWPA*CLVFHF
Trigger: GAAGTGAAAAACTAGACAGCAAGCTGGCCAATATTG...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTCAATATTGGCCAGCTTaGTGTCTAGTTTTTCACTTC +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVQYWPA*CLVFHF
Trigger: GAAGTGAAAAACTAGACAGCAAGCTGGCCAATATTG...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGAGGGACCTGTCTTGGTaGTTAGACTTTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKRDLSW*LDFEGL
Trigger: CAGCCCTTCAAAGTCTAAGCACCAAGACAGGTCCCT...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGAGGCTCTTTGCCTTTTaGAGAGCCAGCACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKRLFAF*RASTQL
Trigger: AAGCTGAGTGCTGGCTCTGCAAAAGGCAAAGAGCCT...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTAGGGGGAGAAATTCCTTaGACTGTCTTGAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLGGEIP*TVLRAI
Trigger: AATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCC...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTTGGCCTTCTTTGGCATaGCCTTCTGCAGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECWPSLA*PSAASN
Trigger: ATTGGAAGCTGCAGAAGGCCATGCCAAAGAAGGCCA...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATATCCTCCGATTCCAGTTaGGGAATAAATTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHISSDSS*GINSAF
Trigger: GAAGGCGGAATTTATTCCCCAACTGGAATCGGAGGA...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGACTTCACCTCATCTTaGCTATCTTTGTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEDFTSS*LSLWFV
Trigger: AACAAACCACAAAGATAGCCAAGATGAGGTGAAGTC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTATCTTTGTCTTCTCCTaGATTTTGAGTTATGCGATC +
Preference number: 4 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVIFVFS*ILSYAI
Trigger: GATCGCATAACTCAAAATTCAGGAGAAGACAAAGAT...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAATCTTTGTCTTCTCCTaGATTTTGAGTTATGCGATC +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEIFVFS*ILSYAI
Trigger: GATCGCATAACTCAAAATTCAGGAGAAGACAAAGAT...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGAGGTCGATAACTGTTaGATTTCAGAGTATTCGGAA +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFEVDNC*ISEYSE
Trigger: TTCCGAATACTCTGAAATGCAACAGTTATCGACCTC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTCCTTTTTGTGAGGACTaGTCCTTAAGGTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECPFCED*SLRSPC
Trigger: GCAAGGAGACCTTAAGGAGCAGTCCTCACAAAAAGG...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTCTTCCATCTGAGCTGTaGCCTTTGGGAACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECLPSEL*PLGTFL
Trigger: AAGAAAGGTTCCCAAAGGCCACAGCTCAGATGGAAG...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAACTTCATAGAGATTGGTaGTCATGCTCATTAATCCCA +
Preference number: 4 (lower is better)
Translates to: HGATRCIRNECETQELAKLHRDW*SCSLIP
Trigger: TGGGATTAATGAGCATGACCACCAATCTCTATGAAG...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATAGATGTGTTTTCAAAATaGCCTGACCTTTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIDVFSK*PDLSNP
Trigger: GGGGTTGGAAAGGTCAGGCCATTTTGAAAACACATC...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGGGGGACACCCTCCATTaGTGTTTTTCAGTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKGDTLH*CFSVWH
Trigger: ATGCCAAACTGAAAAACACCAATGGAGGGTGTCCCC...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTTGCGATCTATACTGCTaGAAACTTTTGAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFCDLYC*KLLKTC
Trigger: ACAGGTTTTCAAAAGTTTTCAGCAGTATAGATCGCA...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTGCGATCTATACTGCTaGAAACTTTTGAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNCDLYC*KLLKTC
Trigger: ACAGGTTTTCAAAAGTTTTCAGCAGTATAGATCGCA...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACATCTTTGTCTTCTCCTaGATTTTGAGTTATGCGATC +
Preference number: 4 (lower is better)
Translates to: MKCMELLDASEMNVKPRNIFVFS*ILSYAI
Trigger: GATCGCATAACTCAAAATTCAGGAGAAGACAAAGAT...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATACTTCGCCCATTTATCTaGTCCAAGTGCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHILRPFI*SKCSEK
Trigger: TTTTTCAGAGCACTTGGATCAGATAAATGGGCGAAG...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGGAACAGGAAGAAAACTaGCTTATCTCCACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKEQEEN*LISTVK
Trigger: CTTCACCGTGGAGATAAGGCAGTTTTCTTCCTGTTC...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTTTATTGAGTCCCAGCTaGCTGATGATATACCTAGGG +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECLLSPS*LMIYLG
Trigger: CCCTAGGTATATCATCAGCCAGCTGGGACTCAATAA...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATTCATGTTTCTCTTCTaGTTTCTTTACGACAACCTT +
Preference number: 4 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEFMFLF*FLYDNL
Trigger: AAGGTTGTCGTAAAGAAACCAGAAGAGAAACATGAA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGGATGTGTTTTCAAAATaGCCTGACCTTTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKDVFSK*PDLSNP
Trigger: GGGGTTGGAAAGGTCAGGCCATTTTGAAAACACATC...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
3UTR CAA 72 bp CTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTaGCTAAAAACAGCAAGCTTCATCTACAACATAAGG +
Preference number: 4 (lower is better)
Translates to: LDASEMNVKPRN*LKTASFIYNIR
Trigger: CCTTATGTTGTAGATGAAGCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTCTTCGCCCATTTATCTaGTCCAAGTGCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: KRLCYEMHGATRCIRNECLRPFI*SKCSEK
Trigger: TTTTTCAGAGCACTTGGATCAGATAAATGGGCGAAG...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR TCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGTGGCTGGTCCCGTTTTaGTTGATGTGTTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKWLVPF*LMCFQM
Trigger: CATTTGAAAACACATCAATCAAAACGGGACCAGCCA...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CCA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATACTTCATAGAGATTGGTaGTCATGCTCATTAATCCCA +
Preference number: 4 (lower is better)
Translates to: YFYKWSLELFSDHRPKHILHRDW*SCSLIP
Trigger: TGGGATTAATGAGCATGACCACCAATCTCTATGAAG...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR GCA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCGATACTTTCTGTTGTaGAGAAGTGTTTGGATAAGA +
Preference number: 4 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKRYFLL*RSVWIR
Trigger: TCTTATCCAAACACTTCTGCACAACAGAAAGTATCG...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS GCA 90 bp GATGCGCTGCTGACCTGGGGCACCGGCAGCACCGCTCCTCCCGGGTaGGGCAGCGGCAGGGTAGGGACTCCACGCTCCAGAGCCACGCGC +
Preference number: 5 (lower is better)
Translates to: DALLTWGTGSTAPPG*GSGRVGTPRSRATR
Trigger: GCGCGTGGCTCTGGAGCGTGGAGTCCCTACCCTGCCGCTGCCGCACCCGGGAGGAGCGGTGCTGCCGGTGCCCCAGGTCAGCAGCGCATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS GCA 90 bp GCTGTGGAGTGGGAGAGGGTGTCCTGGCCAGCGGGGAGAGAGGGATaGTGCCAGCCGACTTCCGTCTTCCAGAGCGGTATCGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: AVEWERVSWPAGREG*CQPTSVFQSGIAAR
Trigger: GCGGGCAGCGATACCGCTCTGGAAGACGGAAGTCGGCTGGCAGCATCCCTCTCTCCCCGCTGGCCAGGACACCCTCTCCCACTCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp GCGCACGAGGTTGGACGTCTCCGCCGAAGCAGGCCAGGCCTGTCCTaGTACCGGGTTTGGAAGGAGGTACCTCCCTGTGAGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AHEVGRLRRSRPGLS*YRVWKEVPPCEGSS
Trigger: GGAGGAGCCCTCACAGGGAGGTACCTCCTTCCAAACCCGGTAGCAGGACAGGCCTGGCCTGCTTCGGCGGAGACGTCCAACCTCGTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS TCA 90 bp CAGAGAAGCCCTTCCCCATGCCCATGGGTGGCCTCTCTGAGCCTCTaGGTCCGGTCTCGCCGTGGTGGAGAGAAGGGCTGGCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: QRSPSPCPWVASLSL*VRSRRGGEKGWPLA
Trigger: AGCCAGAGGCCAGCCCTTCTCTCCACCACGGCGAGACCGGACTCAGAGGCTCAGAGAGGCCACCCATGGGCATGGGGAAGGGCTTCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp CTGGGGTCAGGGCCAGGCCGGGCCTTATGGCTACTGCAGTCACTGTaGCCGGCACTGGTGGTAGTGGTGGTGGTGGCAATGGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: LGSGPGRALWLLQSL*PALVVVVVVAMAVV
Trigger: CACCACTGCCATTGCCACCACCACCACTACCACCAGTGCCGGGCACAGTGACTGCAGTAGCCATAAGGCCCGGCCTGGCCCTGACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp TCTTGCCTGCCCACCTTCCGGGACACGGGGCGTTTCAGACAGCCTTaGTCCACTGGCCTGGCCCGACTGAGGGAAGGAGCGTCACACACA +
Preference number: 5 (lower is better)
Translates to: SCLPTFRDTGRFRQP*STGLARLREGASHT
Trigger: TGTGTGTGACGCTCCTTCCCTCAGTCGGGCCAGGCCAGTGGAGCAAGGCTGTCTGAAACGCCCCGTGTCCCGGAAGGTGGGCAGGCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp CCGTCTGAGGTCACCCCCTCGCTGGCCCTCACGCTGGCCTGCTTGTaGAGAGTGTCCTTCAGCAGGCTGCCCACAGAAGGCAACTCTGCT +
Preference number: 5 (lower is better)
Translates to: PSEVTPSLALTLACL*RVSFSRLPTEGNSA
Trigger: AGCAGAGTTGCCTTCTGTGGGCAGCCTGCTGAAGGACACTCTTCACAAGCAGGCCAGCGTGAGGGCCAGCGAGGGGGTGACCTCAGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp CTTCCAGAGCGGTATCGCTGCCCGCTGAGTTTGGGAGCCAGGCCATaGAGGGTGCTGGGCCGGATGTGCCCTGAACCTGCTGGAGAATTG +
Preference number: 5 (lower is better)
Translates to: LPERYRCPLSLGARP*RVLGRMCPEPAGEL
Trigger: CAATTCTCCAGCAGGTTCAGGGCACATCCGGCCCAGCACCCTCCATGGCCTGGCTCCCAAACTCAGCGGGCAGCGATACCGCTCTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GCCCACCTTCCGGGACACGGGGCGTTTCAGACAGCCTTGCTCCACTaGCCTGGCCCGACTGAGGGAAGGAGCGTCACACACATTCTCTTC +
Preference number: 5 (lower is better)
Translates to: AHLPGHGAFQTALLH*PGPTEGRSVTHILF
Trigger: GAAGAGAATGTGTGTGACGCTCCTTCCCTCAGTCGGGCCAGGCCAGTGGAGCAAGGCTGTCTGAAACGCCCCGTGTCCCGGAAGGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GCCTCTGAGTCCGGTCTCGCCGTGGTGGAGAGAAGGGCTGGCCTCTaGCTTGTAGCCCTCTGGGGCTGCGACATAAAGTGCGTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: ASESGLAVVERRAGL*LVALWGCDIKCVCA
Trigger: TGCACAGACGCACTTTATGTCGCAGCCCCAGAGGGCTACAAGCCAGAGGCCAGCCCTTCTCTCCACCACGGCGAGACCGGACTCAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp TGGGGGTGCTCTGGTCGCCTCTCTGCACGCATTCTGTTTCCTGACTaGGGGAGGCTGGGCGAGCTCTCTCCCTTTGGGTTCTCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: WGCSGRLSARILFPD*GRLGELSPFGFSCG
Trigger: GCCACAGGAGAACCCAAAGGGAGAGAGCTCGCCCAGCCTCCCCCAGTCAGGAAACAGAATGCGTGCAGAGAGGCGACCAGAGCACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTGGCGGCTCTGCACTCTaGGGCCTCACGATGTGTCTG +
Preference number: 5 (lower is better)
Translates to: PVPATLGLGLIAMPPELPGGSAL*GLTMCL
Trigger: CAGACACATCGTGAGGCCCAAGAGTGCAGAGCCGCC...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGAGTGTCCACTGGACCCTaGCTGCCACCCTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRVSTGP*LPPLPS
Trigger: AGAAGGCAAGGGTGGCAGCAAGGGTCCAGTGGACAC...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTCCTGGCCCTTTCCCCTaGGGCTCAGAGAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: PVPATLGLGLIAMPPELPPGPFP*GSEKPF
Trigger: GAAGGGCTTCTCTGAGCCCAAGGGGAAAGGGCCAGG...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp GTGGCAATGGCAGTGGTGGTGGCTGTAGCAGATCGGGGAGTGTCATaGAGGCTGGTGCTTGGTTCTGCAGCGGCAGCTTTGGTCCCGGGC +
Preference number: 5 (lower is better)
Translates to: VAMAVVVAVADRGVS*RLVLGSAAAALVPG
Trigger: GCCCGGGACCAAAGCTGCCGCTGCAGAACCAAGCACCAGCCTTCATGACACTCCCCGATCTGCTACAGCCACCACCACTGCCATTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp AACGGCATGGGTGGCGGAGACAGTATGTGGTCAAGCTCTTCATCCTaGTCCTCTTGGGATGCGCTGCTGACCTGGGGCACCGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: NGMGGGDSMWSSSSS*SSWDALLTWGTGST
Trigger: GGTGCTGCCGGTGCCCCAGGTCAGCAGCGCATCCCAAGAGGAGCAGGATGAAGAGCTTGACCACATACTGTCTCCGCCACCCATGCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 90 bp GGCAGACCACTCGCTTTTCACCTTGGCAGAGGGTTCCTTCAGACATaGCTTCTCCTTTGCGGGCGTCCCTTCCGGTGGGAGTGGGGCACG +
Preference number: 5 (lower is better)
Translates to: GRPLAFHLGRGFLQT*LLLCGRPFRWEWGT
Trigger: CGTGCCCCACTCCCACCGGAAGGGACGCCCGCAAAGGAGAAGCCATGTCTGAAGGAACCCTCTGCCAAGGTGAAAAGCGAGTGGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp GAACTGCTGATGGTGCTGGCTGGGGTGGTGACCTCGGGCTCCTCCTaGGTACACTCCTCAGAGGGAGGGACAGGTTTCTCTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ELLMVLAGVVTSGSS*VHSSEGGTGFSGSS
Trigger: AGAGGAGCCAGAGAAACCTGTCCCTCCCTCTGAGGAGTGTACTCAGGAGGAGCCCGAGGTCACCACCCCAGCCAGCACCATCAGCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp TTGGCATTGCCCAGTGAGTGTCCCAACAGTGGGGATGGTGAACGCTaGGGAGAGGTAGGCTGTGGAGTGGGAGAGGGTGTCCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LALPSECPNSGDGER*GEVGCGVGEGVLAS
Trigger: GCTGGCCAGGACACCCTCTCCCACTCCACAGCCTACCTCTCCTCAGCGTTCACCATCCCCACTGTTGGGACACTCACTGGGCAATGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp TGGCTTTCAGCTTGTCCCGGTCCAGGTCATCCACAGACTCTTGCCTaGCCACCTTCCGGGACACGGGGCGTTTCAGACAGCCTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: WLSACPGPGHPQTLA*PPSGTRGVSDSLAP
Trigger: TGGAGCAAGGCTGTCTGAAACGCCCCGTGTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGGATGACCTGGACCGGGACAAGCTGAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp ACCTTGGCTTTCAGCTTGTCCCGGTCCAGGTCATCCACAGACTCTTaGCTGCCCACCTTCCGGGACACGGGGCGTTTCAGACAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: TLAFSLSRSRSSTDS*LPTFRDTGRFRQPC
Trigger: GCAAGGCTGTCTGAAACGCCCCGTGTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGGATGACCTGGACCGGGACAAGCTGAAAGCCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GAAGTGAAAGGTCAAGAGAGGACTACAGGGGCTGCCCGGGCTGGATaGGGTGGGACTCAGGCTCCTTGGAGTGAGATCCAAGGTCAGCCC +
Preference number: 5 (lower is better)
Translates to: EVKGQERTTGAARAG*GGTQAPWSEIQGQP
Trigger: GGGCTGACCTTGGATCTCACTCCAAGGAGCCTGAGTCCCACCCCATCCAGCCCGGGCAGCCCCTGTAGTCCTCTCTTGACCTTTCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099202.10
CDS CCA 90 bp CATTGTGTAGGGTCTGCCCTGGGCCAGGGAGGTTCCTGGTGTCAGTaGAGCGGTCTTGGTGTGTGGCGGGACCACCCTCTTTCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: HCVGSALGQGGSWCQ*SGLGVWRDHPLSAE
Trigger: TTCAGCAGAAAGAGGGTGGTCCCGCCACACACCAAGACCGCTCCACTGACACCAGGAACCTCCCTGGCCCAGGGCAGACCCTACACAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GGGGGCAGCGGAGAGCTTTTCTCGCTTCTCACCCTCAATTCCTGGTaGCTGAGGAGGGCACCGGGTAGCAGGAACTTCCGGTTTGGGTTC +
Preference number: 5 (lower is better)
Translates to: GGSGELFSLLTLNSW*LRRAPGSRNFRFGF
Trigger: GAACCCAAACCGGAAGTTCCTGCTACCCGGTGCCCTCCTCAGCCACCAGGAATTGAGGGTGAGAAGCGAGAAAAGCTCTCCGCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGATGCACCGGCTCTCCGTaGATGTGTGTGATCAGATCC +
Preference number: 5 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRCTGSP*MCVIRS
Trigger: GGATCTGATCACACACATCAACGGAGAGCCGGTGCA...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGAGAACCTGCTGGAGAATaGGGGGCACTTGAACTTGGG +
Preference number: 5 (lower is better)
Translates to: ARDLPVSSPAALVQCLPREPAGE*GALELG
Trigger: CCCAAGTTCAAGTGCCCCCAATTCTCCAGCAGGTTC...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTCATGAAGGCTGGTGCTaGGTTCTGCAGCGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: PVPATLGLGLIAMPPELPHEGWC*VLQRQL
Trigger: AAGCTGCCGCTGCAGAACCAAGCACCAGCCTTCATG...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp CCACTCTTCAGCAGGAGCTCGATAACTTCCGTGTGGACGAGGCCGTaGACCGGCTCTCCGTTGATGTGTGTGATCAGATCCCCGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PLFSRSSITSVWTRP*TGSPLMCVIRSPAF
Trigger: GAAGGCCGGGGATCTGATCACACACATCAACGGAGAGCCGGTGCACGGCCTCGTCCACACGGAAGTTATCGAGCTCCTGCTGAAGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GGGCTCCTCCTGAGTACACTCCTCAGAGGGAGGGACAGGTTTCTCTaGCTCCTCTCTGGGGTCTCCAGAGCAAGGGACAGCCTCATCTTG +
Preference number: 5 (lower is better)
Translates to: GLLLSTLLRGRDRFL*LLSGVSRARDSLIL
Trigger: CAAGATGAGGCTGTCCCTTGCTCTGGAGACCCCAGAGAGGAGCCAGAGAAACCTGTCCCTCCCTCTGAGGAGTGTACTCAGGAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GGAGAGAGCTCTGCACGGTGGCAGAGGGTGACCTTTTCATACCGCTaGGCTTGCCTGTTTCAGCCAGTGACTTCTGGGGACCTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: GESSARWQRVTFSYR*ACLFQPVTSGDLAL
Trigger: AAGGGCCAGGTCCCCAGAAGTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGAAAAGGTCACCCTCTGCCACCGTGCAGAGCTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp CTGGTCGCCTCTCTGCACGCATTCTGTTTCCTGACTGGGGGAGGCTaGGCGAGCTCTCTCCCTTTGGGTTCTCCTGTGGCAGCAGTTACT +
Preference number: 5 (lower is better)
Translates to: LVASLHAFCFLTGGG*ASSLPLGSPVAAVT
Trigger: AGTAACTGCTGCCACAGGAGAACCCAAAGGGAGAGAGCTCGCCCAGCCTCCCCCAGTCAGGAAACAGAATGCGTGCAGAGAGGCGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTGAGGTGACCAACAGGTaGTCTGGCTTCAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PVPATLGLGLIAMPPELPEVTNR*SGFKSL
Trigger: CAGGGACTTGAAGCCAGACAACCTGTTGGTCACCTC...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTGCACCGGCTCTCCGTaGATGTGTGTGATCAGATCC +
Preference number: 5 (lower is better)
Translates to: PVPATLGLGLIAMPPELPCTGSP*MCVIRS
Trigger: GGATCTGATCACACACATCAACGGAGAGCCGGTGCA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTGAACCTGCTGGAGAATaGGGGGCACTTGAACTTGGG +
Preference number: 5 (lower is better)
Translates to: PVPATLGLGLIAMPPELPEPAGE*GALELG
Trigger: CCCAAGTTCAAGTGCCCCCAATTCTCCAGCAGGTTC...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTTTCATACCGCTGGGCTaGCCTGTTTCAGCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPFIPLG*PVSASD
Trigger: GTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGAA...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS TCA 90 bp GGACTCTGTGCAGGCTCTGGGGAAAGCAACTCTGTTTTGGAGGCGTaGGGTCCAGACAGGAGAGCAATGTCCAGTGTGCCCTCGATCGGC +
Preference number: 5 (lower is better)
Translates to: GLCAGSGESNSVLEA*GPDRRAMSSVPSIG
Trigger: GCCGATCGAGGGCACACTGGACATTGCTCTCCTGTCTGGACCTCACGCCTCCAAAACAGAGTTGCTTTCCCCAGAGCCTGCACAGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp GCAGCGGAGAGCTTTTCTCGCTTCTCACCCTCAATTCCTGGTGGCTaGGGAGGGCACCGGGTAGCAGGAACTTCCGGTTTGGGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: AAESFSRFSPSIPGG*GGHRVAGTSGLGSG
Trigger: TCCTGAACCCAAACCGGAAGTTCCTGCTACCCGGTGCCCTCCTCAGCCACCAGGAATTGAGGGTGAGAAGCGAGAAAAGCTCTCCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp CTGGGCTGGGACTCTGTGCAGGCTCTGGGGAAAGCAACTCTGTTTTaGAGGCGTGAGGTCCAGACAGGAGAGCAATGTCCAGTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LGWDSVQALGKATLF*RREVQTGEQCPVCP
Trigger: AGGGCACACTGGACATTGCTCTCCTGTCTGGACCTCACGCCTCCAAAACAGAGTTGCTTTCCCCAGAGCCTGCACAGAGTCCCAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp CGAGGCCGCAGGCCACATCTGGGTTGCTGCATTTCCGAAACGGCATaGGTGGCGGAGACAGTATGTGGTCAAGCTCTTCATCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: RGRRPHLGCCISETA*VAETVCGQALHPAP
Trigger: AGGAGCAGGATGAAGAGCTTGACCACATACTGTCTCCGCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCTGCGGCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 90 bp GCAGCTGGGTCCACTAGTCTCTGCCGATGTCGAGCTGAGTTGAAATaGCTCTTCGGAGGTTGCCCTTCCTGGAGCCCTCTCCGTCTCAGA +
Preference number: 5 (lower is better)
Translates to: AAGSTSLCRCRAELK*LFGGCPSWSPLRLR
Trigger: TCTGAGACGGAGAGGGCTCCAGGAAGGGCAACCTCCGAAGAGCCATTTCAACTCAGCTCGACATCGGCAGAGACTAGTGGACCCAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGATCTAAAGGGTCCTTATaGAGTCCCAGCTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRSKGSL*SPSWLM
Trigger: CATCAGCCAGCTGGGACTCAATAAGGACCCTTTAGA...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACTGGCGGGGTCTCTTGTaGCCCTGCCATGGGCCGTAT +
Preference number: 5 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNWRGLL*PCHGPY
Trigger: ATACGGCCCATGGCAGGGCAACAAGAGACCCCGCCA...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGACACATGGTCCCACGTaGATGCCTGGGCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQTHGPT*MPGLGL
Trigger: GAGTCCCAGCCCAGGCATCAACGTGGGACCATGTGT...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGTCAGTGGAGCGGTCTaGGTGTGTGGCGGGACCACC +
Preference number: 5 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVVSGAV*VCGGTT
Trigger: GGTGGTCCCGCCACACACCAAGACCGCTCCACTGAC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGTGTCCACTGGACCCTaGCTGCCACCCTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQVSTGP*LPPLPS
Trigger: AGAAGGCAAGGGTGGCAGCAAGGGTCCAGTGGACAC...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGATGAGGGGCTGCTGTaGGCTGCAGGGACCTCTCGC +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVDEGLL*AAGTSR
Trigger: GCGAGAGGTCCCTGCAGCCAACAGCAGCCCCTCATC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACGATGAGGGGCTGCTGTaGGCTGCAGGGACCTCTCGC +
Preference number: 5 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYDEGLL*AAGTSR
Trigger: GCGAGAGGTCCCTGCAGCCAACAGCAGCCCCTCATC...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGATGGCTCTTCGGAGGTaGCCCTTCCTGGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQMALRR*PFLEPS
Trigger: AGAGGGCTCCAGGAAGGGCAACCTCCGAAGAGCCAT...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS TCA 90 bp AGCCTCTCCAGCGGATTCTGCCTGAGGAGCAAGGTAATCAGCTCCTaGGCGTCTGGAGGAGGGGCCTCGTCCTTTTCAGGCCAGTTGATT +
Preference number: 5 (lower is better)
Translates to: SLSSGFCLRSKVISS*ASGGGASSFSGQLI
Trigger: AATCAACTGGCCTGAAAAGGACGAGGCCCCTCCTCCAGACGCTCAGGAGCTGATTACCTTGCTCCTCAGGCAGAATCCGCTGGAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp GGTTCTGCAGCGGCAGCTTTGGTCCCGGGCTCCTTCTTTAAAGTGTaGCTCGGAGAACTGCCGTGCTGCCAGGATGCTGAGTTAGACAGC +
Preference number: 5 (lower is better)
Translates to: GSAAAALVPGSFFKV*LGELPCCQDAELDS
Trigger: GCTGTCTAACTCAGCATCCTGGCAGCACGGCAGTTCTCCGAGTCACACTTTAAAGAAGGAGCCCGGGACCAAAGCTGCCGCTGCAGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp CCCTTGCTGCCACCCTTGCCTTCTCTGATGGAACCACCCAGGGGTTaGGTGACAGGCTCTTTGCCTTTTGCAGAGCCAGCACTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PLLPPLPSLMEPPRG*VTGSLPFAEPALSF
Trigger: GAAGCTGAGTGCTGGCTCTGCAAAAGGCAAAGAGCCTGTCACTCAACCCCTGGGTGGTTCCATCAGAGAAGGCAAGGGTGGCAGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp TTGAAGCAGCTGGGTCCACTAGTCTCTGCCGATGTCGAGCTGAGTTaGAATGGCTCTTCGGAGGTTGCCCTTCCTGGAGCCCTCTCCGTC +
Preference number: 5 (lower is better)
Translates to: LKQLGPLVSADVELS*NGSSEVALPGALSV
Trigger: GACGGAGAGGGCTCCAGGAAGGGCAACCTCCGAAGAGCCATTTCAACTCAGCTCGACATCGGCAGAGACTAGTGGACCCAGCTGCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS GCA 90 bp AGGTACCTCCCTGTGAGGGCTCCTCCCAGGCTCCCCCGCCGCAGCTaGTTCCCATCCTCACTAAGCTGTCTCTTGTACTTCAGTGATTTT +
Preference number: 5 (lower is better)
Translates to: RYLPVRAPPRLPRRS*FPSSLSCLLYFSDF
Trigger: AAAATCACTGAAGTACAAGAGACAGCTTAGTGAGGATGGGAAGCAGCTGCGGCGGGGGAGCCTGGGAGGAGCCCTCACAGGGAGGTACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 90 bp GGGGAGTGTCATGAAGGCTGGTGCTTGGTTCTGCAGCGGCAGCTTTaGTCCCGGGCTCCTTCTTTAAAGTGTGACTCGGAGAACTGCCGT +
Preference number: 5 (lower is better)
Translates to: GECHEGWCLVLQRQL*SRAPSLKCDSENCR
Trigger: ACGGCAGTTCTCCGAGTCACACTTTAAAGAAGGAGCCCGGGACCAAAGCTGCCGCTGCAGAACCAAGCACCAGCCTTCATGACACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp CCCGACCTTCTCCCTGCACAAGCACATCACTTGCTTTGCCCTGGGTaGTCAGGACAGCAGAAAATGTGTCCACTGGACCCTTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: PDLLPAQAHHLLCPG*SGQQKMCPLDPCCH
Trigger: GTGGCAGCAAGGGTCCAGTGGACACATTTTCTGCTGTCCTGACCACCCAGGGCAAAGCAAGTGATGTGCTTGTGCAGGGAGAAGGTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GGGTTGCTGCATTTCCGAAACGGCATGGGTGGCGGAGACAGTATGTaGTCAAGCTCTTCATCCTGCTCCTCTTGGGATGCGCTGCTGACC +
Preference number: 5 (lower is better)
Translates to: GLLHFRNGMGGGDSM*SSSSSCSSWDALLT
Trigger: GGTCAGCAGCGCATCCCAAGAGGAGCAGGATGAAGAGCTTGACCACATACTGTCTCCGCCACCCATGCCGTTTCGGAAATGCAGCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 90 bp GCCGCAGGCCACATCTGGGTTGCTGCATTTCCGAAACGGCATGGGTaGCGGAGACAGTATGTGGTCAAGCTCTTCATCCTGCTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: AAGHIWVAAFPKRHG*RRQYVVKLFILLLL
Trigger: CAAGAGGAGCAGGATGAAGAGCTTGACCACATACTGTCTCCGCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTGGGGGCACTTGAACTaGGGGAGCTGCTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVWGHLN*GSCSGR
Trigger: CCTCCCAGAGCAGCTCCCCAAGTTCAAGTGCCCCCA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTTTGGTGGGTGGGGGTaGTTGAGGGCCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSFGGWG*LRATTS
Trigger: GGAGGTAGTGGCCCTCAACAACCCCCACCCACCAAA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGCTCCTTAAGGTCTCCTaGCCCCTTCTCTGCCGAACC +
Preference number: 5 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQLLKVS*PLLCRT
Trigger: GGTTCGGCAGAGAAGGGGCAAGGAGACCTTAAGGAG...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACACAGGCCACATCTGGGTaGCTGCATTTCCGAAACGGC +
Preference number: 5 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTQATSG*LHFRNG
Trigger: GCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCTG...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CAA 90 bp AGGTATGGAATTGAAAAGGTGGGGAGGACCTGGGAGGAGGTAAGGAAATTACTGGAGCGAGGGAGCCGATaGGCCAAGGGCCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: RYGIEKVGRTWEEVRKLLERGSR*AKGLAA
Trigger: CGCAGCCAGGCCCTTGGCCAATCGGCTCCCTCGCTC...CAGTAATTTCCTTACCTCCTCCCAGGTCCTCCCCACCTTTTCAATTCCATACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS TCA 90 bp CACGTACACGCGGATAGCACGGATGGTGAACCCATAGTTCTTGCCTaGGCTGTGGATGACAATGGGCTGATGCGGACTGGCAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: HVHADSTDGEPIVLA*AVDDNGLMRTGRCC
Trigger: GCAGCATCTGCCAGTCCGCATCAGCCCATTGTCATCCACAGCTCAGGCAAGAACTATGGGTTCACCATCCGTGCTATCCGCGTGTACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp ATGCTTGCGGGAGCACAGAAGCTTCTTGTCACTGCCATAGGAGGGTaGCAACTTTTCCTCCGACTGCACCCGTTTCAGCAGTGGGGAGCG +
Preference number: 5 (lower is better)
Translates to: MLAGAQKLLVTAIGG*QLFLRLHPFQQWGA
Trigger: CGCTCCCCACTGCTGAAACGGGTGCAGTCGGAGGAAAAGTTGTCACCCTCCTATGGCAGTGACAAGAAGCTTCTGTGCTCCCGCAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp GAGGTCCAGACAGGAGAGCAATGTCCAGTGTGCCCTCGATCGGCTTaGGACATGAAACTGACCTGCCCTCTAGCTTATACTCGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: EVQTGEQCPVCPRSA*DMKLTCPLAYTRRG
Trigger: GCCCCTCCGAGTATAAGCTAGAGGGCAGGTCAGTTTCATGTCTCAAGCCGATCGAGGGCACACTGGACATTGCTCTCCTGTCTGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp TGCCAGGATGCTGAGTTAGACAGCTCTTTGGTGGGTGGGGGTTGTTaGGGGCCACTACCTCCAGGCCTTTGCGAAGTCTGTTCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: CQDAELDSSLVGGGC*GPLPPGLCEVCSFL
Trigger: CAGGAAGGAACAGACTTCGCAAAGGCCTGGAGGTAGTGGCCCTCAACAACCCCCACCCACCAAAGAGCTGTCTAACTCAGCATCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp AGAGAGTCACTCTTTATCATTTGGCTTCGGCCGTCTCCTCCAGACTaGAGCTTCCTGTGGTCCCTGCTGCTGGGGGCTGGGAACTCTGAG +
Preference number: 5 (lower is better)
Translates to: RESLFIIWLRPSPPD*SFLWSLLLGAGNSE
Trigger: CTCAGAGTTCCCAGCCCCCAGCAGCAGGGACCACAGGAAGCTTCAGTCTGGAGGAGACGGCCGAAGCCAAATGATAAAGAGTGACTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp CAATGGGCTGATGCGGACTGGCAGATGCTGCAGAAGAGTCTCGGCTaGGAGAGGAATCCCGTGAAGAAGAAGGGTCTGAAGACAGGGAGT +
Preference number: 5 (lower is better)
Translates to: QWADADWQMLQKSLG*ERNPVKKKGLKTGS
Trigger: ACTCCCTGTCTTCAGACCCTTCTTCTTCACGGGATTCCTCTCCCAGCCGAGACTCTTCTGCAGCATCTGCCAGTCCGCATCAGCCCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp TGTTGCCCTGCCATGGGCCGTATGGGGTTCCCTGGCAGACATTCATaGGCGCTAGATGTTATCTTGGGTTTCAGGATGGCACAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: CCPAMGRMGFPGRHS*ALDVILGFRMAQWL
Trigger: CAGCCACTGTGCCATCCTGAAACCCAAGATAACATCTAGCGCCCATGAATGTCTGCCAGGGAACCCCATACGGCCCATGGCAGGGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp ACTTGCTTTGCCCTGGGTGGTCAGGACAGCAGAAAATGTGTCCACTaGACCCTTGCTGCCACCCTTGCCTTCTCTGATGGAACCACCCAG +
Preference number: 5 (lower is better)
Translates to: TCFALGGQDSRKCVH*TLAATLAFSDGTTQ
Trigger: CTGGGTGGTTCCATCAGAGAAGGCAAGGGTGGCAGCAAGGGTCCAGTGGACACATTTTCTGCTGTCCTGACCACCCAGGGCAAAGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GAGTGGCTTCTGGTCTGCTGCTTCACTGAGATGTCCTTGTCTGGGTaGATGCTTCGCCTGCATCTCTGGGGGACACCCTCCATTGGTGTT +
Preference number: 5 (lower is better)
Translates to: EWLLVCCFTEMSLSG*MLRLHLWGTPSIGV
Trigger: AACACCAATGGAGGGTGTCCCCCAGAGATGCAGGCGAAGCATCCACCCAGACAAGGACATCTCAGTGAAGCAGCAGACCAGAAGCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGGCTGGAGACTGGCCATaGCCTATCAAACTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQAGDWP*PIKLFR
Trigger: CCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAGC...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTAAGCCAGAGCTGAGTTaGCACCTGTTGCTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: PVPATLGLGLIAMPPELPKPELS*HLLLSV
Trigger: TACTGAAAGCAACAGGTGCAAACTCAGCTCTGGCTT...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGCCTGGCCCTTTCCCCTaGGGCTCAGAGAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGPGPFP*GSEKPF
Trigger: GAAGGGCTTCTCTGAGCCCAAGGGGAAAGGGCCAGG...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCGTCCTGCTACCGGGTTaGGAAGGAGGTACCTCCCTG +
Preference number: 5 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFVLLPG*EGGTSL
Trigger: CAGGGAGGTACCTCCTTCCAAACCCGGTAGCAGGAC...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167058.8
CDS TCA 90 bp CCGCAGCTGCTTCCCATCCTCACTAAGCTGTCTCTTGTACTTCAGTaGTTTTCCGAGGCCGCAGGCCACATCTGGGTTGCTGCATTTCCG +
Preference number: 5 (lower is better)
Translates to: PQLLPILTKLSLVLQ*FSEAAGHIWVAAFP
Trigger: CGGAAATGCAGCAACCCAGATGTGGCCTGCGGCCTCGGAAAATCACTGAAGTACAAGAGACAGCTTAGTGAGGATGGGAAGCAGCTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS TCA 90 bp GTGTGGGGACATTGGGCTTCCCAATGGAGATACAGCGAACATATCTaGCAGTGTGGAACTGCTGATGGTGCTGGCTGGGGTGGTGACCTC +
Preference number: 5 (lower is better)
Translates to: VWGHWASQWRYSEHI*QCGTADGAGWGGDL
Trigger: GAGGTCACCACCCCAGCCAGCACCATCAGCAGTTCCACACTGTCAGATATGTTCGCTGTATCTCCATTGGGAAGCCCAATGTCCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167462.8
CDS GCA 90 bp TGGCCCTCACGCTGGCCTGCTTGTGAAGAGTGTCCTTCAGCAGGCTaGCCACAGAAGGCAACTCTGCTGATGTGTTTTCAAAATGGCCTG +
Preference number: 5 (lower is better)
Translates to: WPSRWPACEECPSAG*PQKATLLMCFQNGL
Trigger: CAGGCCATTTTGAAAACACATCAGCAGAGTTGCCTTCTGTGGGCAGCCTGCTGAAGGACACTCTTCACAAGCAGGCCAGCGTGAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp GGCTTCTGGTCTGCTGCTTCACTGAGATGTCCTTGTCTGGGTGGATaGTTCGCCTGCATCTCTGGGGGACACCCTCCATTGGTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: GFWSAASLRCPCLGG*FACISGGHPPLVFF
Trigger: GAAAAACACCAATGGAGGGTGTCCCCCAGAGATGCAGGCGAAGCATCCACCCAGACAAGGACATCTCAGTGAAGCAGCAGACCAGAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp TGGAGACGGGCTTTGCTTCTCACCAGCAATGAGTGGCTTCTGGTCTaGTGCTTCACTGAGATGTCCTTGTCTGGGTGGATGCTTCGCCTG +
Preference number: 5 (lower is better)
Translates to: WRRALLLTSNEWLLV*CFTEMSLSGWMLRL
Trigger: CAGGCGAAGCATCCACCCAGACAAGGACATCTCAGTGAAGCAGCAGACCAGAAGCCACTCATTGCTGGTGAGAAGCAAAGCCCGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp CAGCGGATTCTGCCTGAGGAGCAAGGTAATCAGCTCCTGAGCGTCTaGAGGAGGGGCCTCGTCCTTTTCAGGCCAGTTGATTTCATCACT +
Preference number: 5 (lower is better)
Translates to: QRILPEEQGNQLLSV*RRGLVLFRPVDFIT
Trigger: AGTGATGAAATCAACTGGCCTGAAAAGGACGAGGCCCCTCCTCCAGACGCTCAGGAGCTGATTACCTTGCTCCTCAGGCAGAATCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GACACCTTATTCCCACTCTTCAGCAGGAGCTCGATAACTTCCGTGTaGACGAGGCCGTGCACCGGCTCTCCGTTGATGTGTGTGATCAGA +
Preference number: 5 (lower is better)
Translates to: DTLFPLFSRSSITSV*TRPCTGSPLMCVIR
Trigger: TCTGATCACACACATCAACGGAGAGCCGGTGCACGGCCTCGTCCACACGGAAGTTATCGAGCTCCTGCTGAAGAGTGGGAATAAGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACGCTGGAGACTGGCCATaGCCTATCAAACTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNAGDWP*PIKLFR
Trigger: CCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAGC...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCCTTACGAGGGCTGTCAAAGAGATGCCCAGCTCCCCCTGTCCTGGCCACTCCTGTCTCAGGGAAGTATTaGAGCTACTCACTGACTCAT +
Preference number: 5 (lower is better)
Translates to: PLRGLSKRCPAPPVLATPVSGKY*SYSLTH
Trigger: ATGAGTCAGTGAGTAGCTCAAATACTTCCCTGAGAC...AGGAGTGGCCAGGACAGGGGGAGCTGGGCATCTCTTTGACAGCCCTCGTAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCCAGGGACTTGCCTGTTTCCTCACCAGCAGCGCTGGTCCAGTGCCTGCCACGATCCTTTTCAGGCCAGTaGATTTCATCACTGATGACT +
Preference number: 5 (lower is better)
Translates to: ARDLPVSSPAALVQCLPRSFSGQ*ISSLMT
Trigger: AGTCATCAGTGATGAAATCAACTGGCCTGAAAAGGA...TCGTGGCAGGCACTGGACCAGCGCTGCTGGTGAGGAAACAGGCAAGTCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTGGGGGCACTTGAACTaGGGGAGCTGCTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTWGHLN*GSCSGR
Trigger: CCTCCCAGAGCAGCTCCCCAAGTTCAAGTGCCCCCA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGGCGGCTCTGCACTCTaGGGCCTCACGATGTGTCTG +
Preference number: 5 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTGGSAL*GLTMCL
Trigger: CAGACACATCGTGAGGCCCAAGAGTGCAGAGCCGCC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGTGGCGGGGTCTCTTGTaGCCCTGCCATGGGCCGTAT +
Preference number: 5 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKWRGLL*PCHGPY
Trigger: ATACGGCCCATGGCAGGGCAACAAGAGACCCCGCCA...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTGTCAGTGGAGCGGTCTaGGTGTGTGGCGGGACCACC +
Preference number: 5 (lower is better)
Translates to: LATVLPVTTGKASGRKFPVSGAV*VCGGTT
Trigger: GGTGGTCCCGCCACACACCAAGACCGCTCCACTGAC...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTTCATACCGCTGGGCTaGCCTGTTTCAGCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSFIPLG*PVSASD
Trigger: GTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGAA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp ACTGCTCCCTCTGTACCTCCTCTTGTGTCACCTCTAGGCTATGCTTaGGGGAGCACAGAAGCTTCTTGTCACTGCCATAGGAGGGTGACA +
Preference number: 5 (lower is better)
Translates to: TAPSVPPLVSPLGYA*GSTEASCHCHRRVT
Trigger: TGTCACCCTCCTATGGCAGTGACAAGAAGCTTCTGTGCTCCCGCAAGCATAGCCTAGAGGTGACACAAGAGGAGGTACAGAGGGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp GGACACTCTTCAGTGTGGACAATGATTGAGACCCGACCTTCTCCCTaGACAAGCACATCACTTGCTTTGCCCTGGGTGGTCAGGACAGCA +
Preference number: 5 (lower is better)
Translates to: GHSSVWTMIETRPSP*TSTSLALPWVVRTA
Trigger: TGCTGTCCTGACCACCCAGGGCAAAGCAAGTGATGTGCTTGTGCAGGGAGAAGGTCGGGTCTCAATCATTGTCCACACTGAAGAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp TGTACTTCAGTGATTTTCCGAGGCCGCAGGCCACATCTGGGTTGCTaGATTTCCGAAACGGCATGGGTGGCGGAGACAGTATGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: CTSVIFRGRRPHLGC*ISETAWVAETVCGQ
Trigger: TTGACCACATACTGTCTCCGCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCTGCGGCCTCGGAAAATCACTGAAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS GCA 90 bp TCTTGTACTTCAGTGATTTTCCGAGGCCGCAGGCCACATCTGGGTTaGTGCATTTCCGAAACGGCATGGGTGGCGGAGACAGTATGTGGT +
Preference number: 5 (lower is better)
Translates to: SCTSVIFRGRRPHLG*CISETAWVAETVCG
Trigger: ACCACATACTGTCTCCGCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCTGCGGCCTCGGAAAATCACTGAAGTACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 90 bp TGGGGACATTGGGCTTCCCAATGGAGATACAGCGAACATATCTCCTaGGATCATGAGGGACAGAGCACTGGCCGAGAGGGACTTTGTGAC +
Preference number: 5 (lower is better)
Translates to: WGHWASQWRYSEHIS*DHEGQSTGREGLCD
Trigger: GTCACAAAGTCCCTCTCGGCCAGTGCTCTGTCCCTCATGATCCCAGGAGATATGTTCGCTGTATCTCCATTGGGAAGCCCAATGTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GGCGCCCATCCGTTCTCCTCGCAAATGAGAAATGGGCTGAGGCACTaGGGGAGAAATTCCTTGGACTGTCTTGAGGGCTATTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: GAHPFSSQMRNGLRH*GRNSLDCLEGYFLH
Trigger: ATGCAGGAAATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCCAGTGCCTCAGCCCATTTCTCATTTGCGAGGAGAACGGATGGGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGTCAGTTTTGATTCCTaGGCCTTCTTTGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTVSFDS*AFFGMA
Trigger: GGCCATGCCAAAGAAGGCCAAGGAATCAAAACTGAC...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGAGGTGACCAACAGGTaGTCTGGCTTCAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVEVTNR*SGFKSL
Trigger: CAGGGACTTGAAGCCAGACAACCTGTTGGTCACCTC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTGTTCACTGGATGGCTTaGAGGAATTATCTGTACTGT +
Preference number: 5 (lower is better)
Translates to: PVPATLGLGLIAMPPELPVHWMA*RNYLYC
Trigger: ACAGTACAGATAATTCCTCAAAGCCATCCAGTGAAC...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGGGAGTGTGGGGACATaGGGCTTCCCAATGGAGATA +
Preference number: 5 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVGSVGT*GFPMEI
Trigger: TATCTCCATTGGGAAGCCCAATGTCCCCACACTCCC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGGGAGTGTGGGGACATaGGGCTTCCCAATGGAGATA +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVGSVGT*GFPMEI
Trigger: TATCTCCATTGGGAAGCCCAATGTCCCCACACTCCC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTCTGGCTGGTCCCGTTTaGATTGATGTGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: PVPATLGLGLIAMPPELPLAGPV*IDVFSN
Trigger: ATTTGAAAACACATCAATCAAAACGGGACCAGCCAG...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAAAAGGAGAAGGCTGCTaGGCCAGCTTCTTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTKGEGC*ASFLKR
Trigger: TCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTT...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGAGAATTGGGGGCACTaGAACTTGGGGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVENWGH*NLGSCS
Trigger: AGAGCAGCTCCCCAAGTTCAAGTGCCCCCAATTCTC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGAACCTGCTGGAGAATaGGGGGCACTTGAACTTGGG +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVEPAGE*GALELG
Trigger: CCCAAGTTCAAGTGCCCCCAATTCTCCAGCAGGTTC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACGTGCCCTCGATCGGCTaGAGACATGAAACTGACCTG +
Preference number: 5 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYVPSIG*RHETDL
Trigger: CAGGTCAGTTTCATGTCTCAAGCCGATCGAGGGCAC...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAGGTGGGTGGGGGTTGTaGAGGGCCACTACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRGGWGL*RATTSR
Trigger: CCTGGAGGTAGTGGCCCTCAACAACCCCCACCCACC...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGGTGGGTGGGGGTTGTaGAGGGCCACTACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSGGWGL*RATTSR
Trigger: CCTGGAGGTAGTGGCCCTCAACAACCCCCACCCACC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGGTGTCCACTGGACCCTaGCTGCCACCCTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKVSTGP*LPPLPS
Trigger: AGAAGGCAAGGGTGGCAGCAAGGGTCCAGTGGACAC...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGCTCCTTAAGGTCTCCTaGCCCCTTCTCTGCCGAACC +
Preference number: 5 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGLLKVS*PLLCRT
Trigger: GGTTCGGCAGAGAAGGGGCAAGGAGACCTTAAGGAG...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAGTCCTGCTACCGGGTTaGGAAGGAGGTACCTCCCTG +
Preference number: 5 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPVLLPG*EGGTSL
Trigger: CAGGGAGGTACCTCCTTCCAAACCCGGTAGCAGGAC...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CAA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAGAGCGAGGGAGCCGATaGGCCAAGGGCCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: HGATRCIRNECETQELAKERGSR*AKGLAA
Trigger: CGCAGCCAGGCCCTTGGCCAATCGGCTCCCTCGCTC...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CAA 90 bp CCTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAAACTCTTCCGGTTGCTaGTTCGGCAAAGACTTCCTC +
Preference number: 5 (lower is better)
Translates to: PVLATPSGGVQKQQLRNTNSSGC*FGKDFL
Trigger: GAGGAAGTCTTTGCCGAACAAGCAACCGGAAGAGTT...TGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS GCA 90 bp GTTGATGTGTGTGATCAGATCCCCGGCCTTCAGTCCTGCCTGGTATaGGGGACTTCCTTCTTCTACGTTCCAGACGATATGGTGCACTGT +
Preference number: 5 (lower is better)
Translates to: VDVCDQIPGLQSCLV*GTSFFYVPDDMVHC
Trigger: ACAGTGCACCATATCGTCTGGAACGTAGAAGAAGGAAGTCCCGCATACCAGGCAGGACTGAAGGCCGGGGATCTGATCACACACATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp TCACCTCTAGGCTATGCTTGCGGGAGCACAGAAGCTTCTTGTCACTaGCATAGGAGGGTGACAACTTTTCCTCCGACTGCACCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: SPLGYACGSTEASCH*HRRVTTFPPTAPVS
Trigger: TGAAACGGGTGCAGTCGGAGGAAAAGTTGTCACCCTCCTATGGCAGTGACAAGAAGCTTCTGTGCTCCCGCAAGCATAGCCTAGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp AAAGGAAACTGCACTCATCTGAGGTGTGTGGGTACTGTTGATGAATaGCCGGTTTTCAGAGGCTGGCGGGGTCTCTTGTTGCCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: KGNCTHLRCVGTVDE*PVFRGWRGLLLPCH
Trigger: ATGGCAGGGCAACAAGAGACCCCGCCAGCCTCTGAAAACCGGGCATTCATCAACAGTACCCACACACCTCAGATGAGTGCAGTTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp CCAGATGACAGGGACCGGTTTAAGCAGGAGAAACTTCGGCTGGTGTaGAGCAAAGGAGAAGGCTGCTTGGCCAGCTTCTTGAAGAGAGAT +
Preference number: 5 (lower is better)
Translates to: PDDRDRFKQEKLRLV*SKGEGCLASFLKRD
Trigger: ATCTCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTTGCTCCACACCAGCCGAAGTTTCTCCTGCTTAAACCGGTCCCTGTCATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GAGTCCTCCCTGGCCAGGGACTTCACCTCATCTTGGCTATCTTTGTaGTTTGTTTTTGCATGCGCCCATGCTTTCTCCGAAGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: ESSLARDFTSSWLSL*FVFACAHAFSEVWV
Trigger: GACCCAGACTTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCACAAAGATAGCCAAGATGAGGTGAAGTCCCTGGCCAGGGAGGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp TGCTTTGGAGACGGGCTTTGCTTCTCACCAGCAATGAGTGGCTTCTaGTCTGCTGCTTCACTGAGATGTCCTTGTCTGGGTGGATGCTTC +
Preference number: 5 (lower is better)
Translates to: CFGDGLCFSPAMSGF*SAASLRCPCLGGCF
Trigger: GAAGCATCCACCCAGACAAGGACATCTCAGTGAAGCAGCAGACCAGAAGCCACTCATTGCTGGTGAGAAGCAAAGCCCGTCTCCAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp TTTGGGATGCTTTGGAGACGGGCTTTGCTTCTCACCAGCAATGAGTaGCTTCTGGTCTGCTGCTTCACTGAGATGTCCTTGTCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: FGMLWRRALLLTSNE*LLVCCFTEMSLSGW
Trigger: CCACCCAGACAAGGACATCTCAGTGAAGCAGCAGACCAGAAGCCACTCATTGCTGGTGAGAAGCAAAGCCCGTCTCCAAAGCATCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCTGGGGGAGAAATTCCTaGGACTGTCTTGAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSWGRNS*DCLEGY
Trigger: ATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCCA...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTGGAGCTTGGGGTATTaGTCCCATAGCCTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVWSLGY*SHSLRK
Trigger: CTTCCTCAGGCTATGGGACAAATACCCCAAGCTCCA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGTAATTCATCTGGGGTaGGCTGGTATGGTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSVIHLG*AGMVAG
Trigger: ACCAGCTACCATACCAGCCAACCCCAGATGAATTAC...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACTTCTTCTTGGACTTCTaGCTTCGTCTCACCATCCGG +
Preference number: 5 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNFFLDF*LRLTIR
Trigger: CCGGATGGTGAGACGAAGCAAGAAGTCCAAGAAGAA...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCAAAGGAGAAGGCTGCTaGGCCAGCTTCTTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: FLSLLLLMSLWALHGGHSKGEGC*ASFLKR
Trigger: TCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTT...GGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACAAAGGAGAAGGCTGCTaGGCCAGCTTCTTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNKGEGC*ASFLKR
Trigger: TCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTT...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGCGTTTCAGACAGCCTaGCTCCACTGGCCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEAFQTA*LHWPGP
Trigger: CGGGCCAGGCCAGTGGAGCAAGGCTGTCTGAAACGC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCGCGTTTCAGACAGCCTaGCTCCACTGGCCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFAFQTA*LHWPGP
Trigger: CGGGCCAGGCCAGTGGAGCAAGGCTGTCTGAAACGC...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCTGGCGGGGTCTCTTGTaGCCCTGCCATGGGCCGTAT +
Preference number: 5 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSWRGLL*PCHGPY
Trigger: ATACGGCCCATGGCAGGGCAACAAGAGACCCCGCCA...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCAGTCCCAGCTACGCTTGGGCTGGGTCTCATAGCCATGCCACCAGAGCTGCCTTCATCTTGGCTATCTTaGTGGTTTGTTTTTGCATGC +
Preference number: 5 (lower is better)
Translates to: PVPATLGLGLIAMPPELPSSWLS*WFVFAC
Trigger: GCATGCAAAAACAAACCACAAAGATAGCCAAGATGA...AGGCAGCTCTGGTGGCATGGCTATGAGACCCAGCCCAAGCGTAGCTGGGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTACTACCTCCAGGCCTTaGCGAAGTCTGTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVTTSRP*RSLFLP
Trigger: AGGAAGGAACAGACTTCGCAAAGGCCTGGAGGTAGT...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGCATGAAGGCTGGTGCTaGGTTCTGCAGCGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLHEGWC*VLQRQL
Trigger: AAGCTGCCGCTGCAGAACCAAGCACCAGCCTTCATG...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACCATGAAGGCTGGTGCTaGGTTCTGCAGCGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNHEGWC*VLQRQL
Trigger: AAGCTGCCGCTGCAGAACCAAGCACCAGCCTTCATG...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGGTATGGAATTGAAAAGGTGGGGAGGACCTGGGAGGAGGTAAGGAAATTACTGGTCCTGCTACCGGGTTaGGAAGGAGGTACCTCCCTG +
Preference number: 5 (lower is better)
Translates to: RYGIEKVGRTWEEVRKLLVLLPG*EGGTSL
Trigger: CAGGGAGGTACCTCCTTCCAAACCCGGTAGCAGGAC...CAGTAATTTCCTTACCTCCTCCCAGGTCCTCCCCACCTTTTCAATTCCATACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CAA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGGAGCGAGGGAGCCGATaGGCCAAGGGCCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQERGSR*AKGLAA
Trigger: CGCAGCCAGGCCCTTGGCCAATCGGCTCCCTCGCTC...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGGCTCAGCTCCTTTTTaGAAGCAGCTGGGTCCACTA +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVGSAPF*KQLGPL
Trigger: TAGTGGACCCAGCTGCTTCAAAAAAGGAGCTGAGCC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS TCA 90 bp GCCAGCTTGCTGTCTAGTTTTTCACTTCGAAGGAGCTCTTTGGCCTaGGAGGCCTTCTCCGAGTATTCAACCTTTCCAGGAGCAGGCCTA +
Preference number: 5 (lower is better)
Translates to: ASLLSSFSLRRSSLA*EAFSEYSTFPGAGL
Trigger: TAGGCCTGCTCCTGGAAAGGTTGAATACTCGGAGAAGGCCTCTCAGGCCAAAGAGCTCCTTCGAAGTGAAAAACTAGACAGCAAGCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp AATTCATCTGGGGTTGGCTGGTATGGTAGCTGGTGCAACTTCTCCTaGGAAGAACAGGATGAGGAGACGGTGGAGCTTGGGGTATTTGTC +
Preference number: 5 (lower is better)
Translates to: NSSGVGWYGSWCNFS*EEQDEETVELGVFV
Trigger: GACAAATACCCCAAGCTCCACCGTCTCCTCATCCTGTTCTTCCCAGGAGAAGTTGCACCAGCTACCATACCAGCCAACCCCAGATGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000099202.10
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GCACAGACTGGGGTAATCTTTCACAGTGGATGGTTTGGGATGCTTTaGAGACGGGCTTTGCTTCTCACCAGCAATGAGTGGCTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: AQTGVIFHSGWFGML*RRALLLTSNEWLLV
Trigger: GACCAGAAGCCACTCATTGCTGGTGAGAAGCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGAAAGATTACCCCAGTCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp GGCTTCTGTCTGTCTGTCTGCACAGACTGGGGTAATCTTTCACAGTaGATGGTTTGGGATGCTTTGGAGACGGGCTTTGCTTCTCACCAG +
Preference number: 5 (lower is better)
Translates to: GFCLSVCTDWGNLSQ*MVWDALETGFASHQ
Trigger: CTGGTGAGAAGCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGAAAGATTACCCCAGTCTGTGCAGACAGACAGACAGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGTAATTCATCTGGGGTaGGCTGGTATGGTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVVIHLG*AGMVAG
Trigger: ACCAGCTACCATACCAGCCAACCCCAGATGAATTAC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAGAGGTGACCAACAGGTaGTCTGGCTTCAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPEVTNR*SGFKSL
Trigger: CAGGGACTTGAAGCCAGACAACCTGTTGGTCACCTC...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGAGGTGACCAACAGGTaGTCTGGCTTCAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLEVTNR*SGFKSL
Trigger: CAGGGACTTGAAGCCAGACAACCTGTTGGTCACCTC...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACAACAAGCCAGAGCTGAGTTaGCACCTGTTGCTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: LKLVSLQLGALPRGTSYNKPELS*HLLLSV
Trigger: TACTGAAAGCAACAGGTGCAAACTCAGCTCTGGCTT...GTTGTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGGGAGTGTGGGGACATaGGGCTTCCCAATGGAGATA +
Preference number: 5 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTGSVGT*GFPMEI
Trigger: TATCTCCATTGGGAAGCCCAATGTCCCCACACTCCC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTTCTTCTTGGACTTCTaGCTTCGTCTCACCATCCGG +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVFFLDF*LRLTIR
Trigger: CCGGATGGTGAGACGAAGCAAGAAGTCCAAGAAGAA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTTGGGGGCACTTGAACTaGGGGAGCTGCTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVWGHLN*GSCSGR
Trigger: CCTCCCAGAGCAGCTCCCCAAGTTCAAGTGCCCCCA...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCGAGAATTGGGGGCACTaGAACTTGGGGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTENWGH*NLGSCS
Trigger: AGAGCAGCTCCCCAAGTTCAAGTGCCCCCAATTCTC...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGGCGGCTCTGCACTCTaGGGCCTCACGATGTGTCTG +
Preference number: 5 (lower is better)
Translates to: YKHYLATVLPVTTGKASGGGSAL*GLTMCL
Trigger: CAGACACATCGTGAGGCCCAAGAGTGCAGAGCCGCC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACACCTCTAGGCTATGCTaGCGGGAGCACAGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNTSRLC*REHRSF
Trigger: GAAGCTTCTGTGCTCCCGCAAGCATAGCCTAGAGGT...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCACCTCTAGGCTATGCTaGCGGGAGCACAGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTTSRLC*REHRSF
Trigger: GAAGCTTCTGTGCTCCCGCAAGCATAGCCTAGAGGT...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGCGTTTCAGACAGCCTaGCTCCACTGGCCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFAFQTA*LHWPGP
Trigger: CGGGCCAGGCCAGTGGAGCAAGGCTGTCTGAAACGC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCGGCCAGCTAAGGCTTaGAGAGGAACAAAGGAAACT +
Preference number: 5 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFRPAKA*RGTKET
Trigger: AGTTTCCTTTGTTCCTCTCAAAGCCTTAGCTGGCCG...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAACACATGGTCCCACGTaGATGCCTGGGCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRTHGPT*MPGLGL
Trigger: GAGTCCCAGCCCAGGCATCAACGTGGGACCATGTGT...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGGTGGGTGGGGGTTGTaGAGGGCCACTACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFGGWGL*RATTSR
Trigger: CCTGGAGGTAGTGGCCCTCAACAACCCCCACCCACC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGCAGGCTCTTTGCCTTTaGCAGAGCCAGCACTCAGCT +
Preference number: 5 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLQALCL*QSQHSA
Trigger: AGCTGAGTGCTGGCTCTGCAAAAGGCAAAGAGCCTG...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGATGAGGGGCTGCTGTaGGCTGCAGGGACCTCTCGC +
Preference number: 5 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFDEGLL*AAGTSR
Trigger: GCGAGAGGTCCCTGCAGCCAACAGCAGCCCCTCATC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCCAGGCCACATCTGGGTaGCTGCATTTCCGAAACGGC +
Preference number: 5 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIQATSG*LHFRNG
Trigger: GCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCTG...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS-3UTR CAA 90 bp TGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGACAACGCATGCGCACGAGGTaGGACGTCTCCGCCGAAGCA +
Preference number: 5 (lower is better)
Translates to: CLYTVYGCNLAFVGVRGQRMRTR*DVSAEA
Trigger: TGCTTCGGCGGAGACGTCCAACCTCGTGCGCATGCG...TTGTCCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS CCA 90 bp CTGTGCTTTCTAAGCGCTGTCGAGCCACGTGAGAAGTGGGTTCACTaGATGGCTTTGAGGAATTATCTGTACTGTCCACACACTCGCTTC +
Preference number: 5 (lower is better)
Translates to: LCFLSAVEPREKWVH*MALRNYLYCPHTRF
Trigger: GAAGCGAGTGTGTGGACAGTACAGATAATTCCTCAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTCGACAGCGCTTAGAAAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTGCTGGAGACTGGCCATaGCCTATCAAACTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LATVLPVTTGKASGRKFPAGDWP*PIKLFR
Trigger: CCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAGC...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCATTCCTTGGACTGTCTaGAGGGCTATTTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFIPWTV*RAISCM
Trigger: CATGCAGGAAATAGCCCTCAAGACAGTCCAAGGAAT...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTCTGAGCTGTGGCCTTaGGGAACCTTTCTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVSELWP*GTFLCR
Trigger: TCTACAAAGAAAGGTTCCCAAAGGCCACAGCTCAGA...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTCTGAGCTGTGGCCTTaGGGAACCTTTCTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVSELWP*GTFLCR
Trigger: TCTACAAAGAAAGGTTCCCAAAGGCCACAGCTCAGA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTTGCACCGGCTCTCCGTaGATGTGTGTGATCAGATCC +
Preference number: 5 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSCTGSP*MCVIRS
Trigger: GGATCTGATCACACACATCAACGGAGAGCCGGTGCA...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAACACATGGTCCCACGTaGATGCCTGGGCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: YKHYLATVLPVTTGKASGTHGPT*MPGLGL
Trigger: GAGTCCCAGCCCAGGCATCAACGTGGGACCATGTGT...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATTTGGTGGGTGGGGGTaGTTGAGGGCCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEFGGWG*LRATTS
Trigger: GGAGGTAGTGGCCCTCAACAACCCCCACCCACCAAA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCGGAACCACCCAGGGGTaGAGTGACAGGCTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFGTTQG*SDRLFA
Trigger: GGCAAAGAGCCTGTCACTCAACCCCTGGGTGGTTCC...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGGAACCACCCAGGGGTaGAGTGACAGGCTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEGTTQG*SDRLFA
Trigger: GGCAAAGAGCCTGTCACTCAACCCCTGGGTGGTTCC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTTCACAGTGGATGGTTaGGGATGCTTTGGAGACGGG +
Preference number: 5 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTFTVDG*GCFGDG
Trigger: CCCGTCTCCAAAGCATCCCAAACCATCCACTGTGAA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTCCTGGCCCTTTCCCCTaGGGCTCAGAGAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFPGPFP*GSEKPF
Trigger: GAAGGGCTTCTCTGAGCCCAAGGGGAAAGGGCCAGG...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGCGAGCTCTCTCCCTTaGGGTTCTCCTGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEASSLP*GSPVAA
Trigger: TGCTGCCACAGGAGAACCCAAAGGGAGAGAGCTCGC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp TTTCAGTTTGGCATCGAGAGGACACTCTTCAGTGTGGACAATGATTaGGACCCGACCTTCTCCCTGCACAAGCACATCACTTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: FQFGIERTLFSVDND*DPTFSLHKHITCFA
Trigger: GGCAAAGCAAGTGATGTGCTTGTGCAGGGAGAAGGTCGGGTCTCAATCATTGTCCACACTGAAGAGTGTCCTCTCGATGCCAAACTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp AGCCAGCTCAATGATCTGATGGTGAGTGAAACTAAGTACCCCATCTaGCAAGGGGAGAACATGGTCTGGAGAGTAGCTGGTGATGATCTC +
Preference number: 5 (lower is better)
Translates to: SQLNDLMVSETKYPI*QGENMVWRVAGDDL
Trigger: GAGATCATCACCAGCTACTCTCCAGACCATGTTCTCCCCTTGGCAGATGGGGTACTTAGTTTCACTCACCATCAGATCATTGAGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 90 bp GGCCAGGGACTTCACCTCATCTTGGCTATCTTTGTGGTTTGTTTTTaGATGCGCCCATGCTTTCTCCGAAGTCTGGGTCTGCTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: GQGLHLILAIFVVCF*MRPCFLRSLGLLVE
Trigger: TTCTACAAGCAGACCCAGACTTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCACAAAGATAGCCAAGATGAGGTGAAGTCCCTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp CCGTTCTGTCATTTCTCCTCGCAAATGAGAAATGGGCTGAGGCACTaGGGGAGAAATTCCTTGGACTGTCTTGAGGGCTATTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: PFCHFSSQMRNGLRH*GRNSLDCLEGYFLH
Trigger: ATGCAGGAAATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCCAGTGCCTCAGCCCATTTCTCATTTGCGAGGAGAAATGACAGAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099202.10
ENSMUST00000172264.8
CDS CCA 90 bp TCTGGTGCGATTCATGTTTCTCTTCTGGTTTCTTTACGACAACCTTaGCTTTCAGCTTGTCCCGGTCCAGGTCATCCACAGACTCTTGCC +
Preference number: 5 (lower is better)
Translates to: SGAIHVSLLVSLRQP*LSACPGPGHPQTLA
Trigger: GGCAAGAGTCTGTGGATGACCTGGACCGGGACAAGCTGAAAGCCAAGGTTGTCGTAAAGAAACCAGAAGAGAAACATGAATCGCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp TATTGGCCAGCTTGCTGTCTAGTTTTTCACTTCGAAGGAGCTCTTTaGCCTGAGAGGCCTTCTCCGAGTATTCAACCTTTCCAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: YWPACCLVFHFEGAL*PERPSPSIQPFQEQ
Trigger: CTGCTCCTGGAAAGGTTGAATACTCGGAGAAGGCCTCTCAGGCCAAAGAGCTCCTTCGAAGTGAAAAACTAGACAGCAAGCTGGCCAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp TCTGTCTGTCTGTCTGCACAGACTGGGGTAATCTTTCACAGTGGATaGTTTGGGATGCTTTGGAGACGGGCTTTGCTTCTCACCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SVCLSAQTGVIFHSG*FGMLWRRALLLTSN
Trigger: ATTGCTGGTGAGAAGCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGAAAGATTACCCCAGTCTGTGCAGACAGACAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGTGGGGGAGAAATTCCTaGGACTGTCTTGAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKWGRNS*DCLEGY
Trigger: ATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCCA...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCATCTGAGCTGTGGCCTTaGGGAACCTTTCTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPSELWP*GTFLCR
Trigger: TCTACAAAGAAAGGTTCCCAAAGGCCACAGCTCAGA...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGCAGTGTGTTTATAGTCCCTGTGTGCCCTCCGGTGAAGACCAGACATATAACGTCAGTTTTGATTCCTaGGCCTTCTTTGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: LQCVYSPCVPSGEDQTYNVSFDS*AFFGMA
Trigger: GGCCATGCCAAAGAAGGCCAAGGAATCAAAACTGAC...GTTATATGTCTGGTCTTCACCGGAGGGCACACAGGGACTATAAACACACTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGTCTAAAGGGTCCTTATaGAGTCCCAGCTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLSKGSL*SPSWLM
Trigger: CATCAGCCAGCTGGGACTCAATAAGGACCCTTTAGA...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTGTTGTGCTTTTGGTCTaGTCCTCAGAGTCATCTTTG +
Preference number: 5 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVVVLLV*SSESSL
Trigger: CAAAGATGACTCTGAGGACAAGACCAAAAGCACAAC...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGGTTGTGCTTTTGGTCTaGTCCTCAGAGTCATCTTTG +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVVVLLV*SSESSL
Trigger: CAAAGATGACTCTGAGGACAAGACCAAAAGCACAAC...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCTGCTTGGCCAGCTTCTaGAAGAGAGATCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTCLASF*KRDLLL
Trigger: AAGGAGGAGATCTCTCTTCAAGAAGCTGGCCAAGCA...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGTGCTTGGCCAGCTTCTaGAAGAGAGATCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLCLASF*KRDLLL
Trigger: AAGGAGGAGATCTCTCTTCAAGAAGCTGGCCAAGCA...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGTGCTCTGGGAGGAATTaGTACCTGACGGAAAATCGG +
Preference number: 5 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKCSGRN*YLTENR
Trigger: CCGATTTTCCGTCAGGTACAAATTCCTCCCAGAGCA...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGAGAATTGGGGGCACTaGAACTTGGGGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSENWGH*NLGSCS
Trigger: AGAGCAGCTCCCCAAGTTCAAGTGCCCCCAATTCTC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGTCCTGGCCACTCCTAGCGGAGGGGTCCAAAAGCAGCAGCTCAGAAATACAGTCAATATTGGCCAGCTaGCTGTCTAGTTTTTCACTT +
Preference number: 5 (lower is better)
Translates to: LSWPLLAEGSKSSSSEIQSILAS*LSSFSL
Trigger: AAGTGAAAAACTAGACAGCAAGCTGGCCAATATTGA...CTGTATTTCTGAGCTGCTGCTTTTGGACCCCTCCGCTAGGAGTGGCCAGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGTGCCCTCGATCGGCTaGAGACATGAAACTGACCTG +
Preference number: 5 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSVPSIG*RHETDL
Trigger: CAGGTCAGTTTCATGTCTCAAGCCGATCGAGGGCAC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATAGTCAGTGGAGCGGTCTaGGTGTGTGGCGGGACCACC +
Preference number: 5 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIVSGAV*VCGGTT
Trigger: GGTGGTCCCGCCACACACCAAGACCGCTCCACTGAC...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCACTACCTCCAGGCCTTaGCGAAGTCTGTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTITTSRP*RSLFLP
Trigger: AGGAAGGAACAGACTTCGCAAAGGCCTGGAGGTAGT...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTCAGGCTCTTTGCCTTTaGCAGAGCCAGCACTCAGCT +
Preference number: 5 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFQALCL*QSQHSA
Trigger: AGCTGAGTGCTGGCTCTGCAAAAGGCAAAGAGCCTG...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCAGGCTCTTTGCCTTTaGCAGAGCCAGCACTCAGCT +
Preference number: 5 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSQALCL*QSQHSA
Trigger: AGCTGAGTGCTGGCTCTGCAAAAGGCAAAGAGCCTG...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGGAACCACCCAGGGGTaGAGTGACAGGCTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFGTTQG*SDRLFA
Trigger: GGCAAAGAGCCTGTCACTCAACCCCTGGGTGGTTCC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCTTCATACCGCTGGGCTaGCCTGTTTCAGCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSFIPLG*PVSASD
Trigger: GTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGAA...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTGCGAGCTCTCTCCCTTaGGGTTCTCCTGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFASSLP*GSPVAA
Trigger: TGCTGCCACAGGAGAACCCAAAGGGAGAGAGCTCGC...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAACTCCTTAAGGTCTCCTaGCCCCTTCTCTGCCGAACC +
Preference number: 5 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEELLKVS*PLLCRT
Trigger: GGTTCGGCAGAGAAGGGGCAAGGAGACCTTAAGGAG...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAACTCTTCCGGTTGCTaGTTCGGCAAAGACTTCCTC +
Preference number: 5 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPNSSGC*FGKDFL
Trigger: GAGGAAGTCTTTGCCGAACAAGCAACCGGAAGAGTT...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCCGATGTCGAGCTGAGTaGAAATGGCTCTTCGGAGGT +
Preference number: 5 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTIRCRAE*KWLFGG
Trigger: ACCTCCGAAGAGCCATTTCAACTCAGCTCGACATCG...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS GCA 90 bp CACCTCATCTTGGCTATCTTTGTGGTTTGTTTTTGCATGCGCCCATaGTTTCTCCGAAGTCTGGGTCTGCTTGTAGAAATCGGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: HLILAIFVVCFCMRP*FLRSLGLLVEIGLG
Trigger: ACCCAACCCGATTTCTACAAGCAGACCCAGACTTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCACAAAGATAGCCAAGATGAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp ATTTATTTACTTTTAAGTTGGCTGAGGAAGGCTCTCTCAGGCTGGTaGAGTCTCCCTTTTTCCCACTGCTCCCAGGAAGAGCTAGTGGCA +
Preference number: 5 (lower is better)
Translates to: IYLLLSWLRKALSGW*SLPFSHCSQEELVA
Trigger: TGCCACTAGCTCTTCCTGGGAGCAGTGGGAAAAAGGGAGACTCCACCAGCCTGAGAGAGCCTTCCTCAGCCAACTTAAAAGTAAATAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAATTCCTTGGACTGTCTaGAGGGCTATTTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPIPWTV*RAISCM
Trigger: CATGCAGGAAATAGCCCTCAAGACAGTCCAAGGAAT...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTTGGGGGAGAAATTCCTaGGACTGTCTTGAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSWGRNS*DCLEGY
Trigger: ATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCCA...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACTGGAGCTTGGGGTATTaGTCCCATAGCCTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYWSLGY*SHSLRK
Trigger: CTTCCTCAGGCTATGGGACAAATACCCCAAGCTCCA...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTGGCGATACTTTCTGTaGTGCAGAAGTGTTTGGATA +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVWRYFL*CRSVWI
Trigger: TATCCAAACACTTCTGCACAACAGAAAGTATCGCCA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTGTCAGTTTTGATTCCTaGGCCTTCTTTGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: LATVLPVTTGKASGRKFPVSFDS*AFFGMA
Trigger: GGCCATGCCAAAGAAGGCCAAGGAATCAAAACTGAC...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGCTAGGGATGTCAGTTTaGATTCCTTGGCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGLGMSV*IPWPSL
Trigger: CAAAGAAGGCCAAGGAATCAAAACTGACATCCCTAG...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTCTAAAGGGTCCTTATaGAGTCCCAGCTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: LATVLPVTTGKASGRKFPSKGSL*SPSWLM
Trigger: CATCAGCCAGCTGGGACTCAATAAGGACCCTTTAGA...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AAACTGAAGCTGGTAAGTCTACAGCTGGGAGCGCTACCGAGGGGCACATCTTACTCCTTTTCAGGCCAGTaGATTTCATCACTGATGACT +
Preference number: 5 (lower is better)
Translates to: KLKLVSLQLGALPRGTSYSFSGQ*ISSLMT
Trigger: AGTCATCAGTGATGAAATCAACTGGCCTGAAAAGGA...GTAAGATGTGCCCCTCGGTAGCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGATCCTCCGATTCCAGTaGGGGAATAAATTCCGCCTT +
Preference number: 5 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLILRFQ*GNKFRL
Trigger: AAGGCGGAATTTATTCCCCAACTGGAATCGGAGGAT...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GGCACATCTTACAACCACACAGAGACTGACCAAAGGGAACACGGGAGAAATCCTAAGCCAGAGCTGAGTTaGCACCTGTTGCTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: GTSYNHTETDQREHGRNPKPELS*HLLLSV
Trigger: TACTGAAAGCAACAGGTGCAAACTCAGCTCTGGCTT...AGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTGTGTGGTTGTAAGATGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATGCACCGGCTCTCCGTaGATGTGTGTGATCAGATCC +
Preference number: 5 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEECTGSP*MCVIRS
Trigger: GGATCTGATCACACACATCAACGGAGAGCCGGTGCA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GGCAGAATCTCCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGACTCTCCTTCTTCTaGGACTTCTTGCTTCGTCTC +
Preference number: 5 (lower is better)
Translates to: GRISLFLSFCHHQLAWQPRLSFF*DFLLRL
Trigger: GAGACGAAGCAAGAAGTCCAAGAAGAAGGAGAGTCT...TGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGGAGATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTACCTCTAGGCTATGCTaGCGGGAGCACAGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVTSRLC*REHRSF
Trigger: GAAGCTTCTGTGCTCCCGCAAGCATAGCCTAGAGGT...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTCGGCCAGCTAAGGCTTaGAGAGGAACAAAGGAAACT +
Preference number: 5 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSRPAKA*RGTKET
Trigger: AGTTTCCTTTGTTCCTCTCAAAGCCTTAGCTGGCCG...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCACTTTGTGGTTTGTTTTaGCATGCGCCCATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPLCGLF*HAPMLS
Trigger: AGAAAGCATGGGCGCATGCAAAAACAAACCACAAAG...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTTTCACAGTGGATGGTTaGGGATGCTTTGGAGACGGG +
Preference number: 5 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFFTVDG*GCFGDG
Trigger: CCCGTCTCCAAAGCATCCCAAACCATCCACTGTGAA...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGGCGAGCTCTCTCCCTTaGGGTTCTCCTGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQASSLP*GSPVAA
Trigger: TGCTGCCACAGGAGAACCCAAAGGGAGAGAGCTCGC...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCGCATGCGCACGAGGTaGGACGTCTCCGCCGAAGCA +
Preference number: 5 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKRMRTR*DVSAEA
Trigger: TGCTTCGGCGGAGACGTCCAACCTCGTGCGCATGCG...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS TCA 90 bp TTGAAAACCTGTGTGAACAGGAAGAAAACTGCCTTATCTCCACGGTaGAGTCCTCATCGTTTGTATCGTCCTCCTCCTCCGTCTCCATGT +
Preference number: 5 (lower is better)
Translates to: LKTCVNRKKTALSPR*SPHRLYRPPPPSPC
Trigger: ACATGGAGACGGAGGAGGAGGACGATACAAACGATGAGGACTTCACCGTGGAGATAAGGCAGTTTTCTTCCTGTTCACACAGGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp TGGAGGTCGATAACTGTTGCATTTCAGAGTATTCGGAACTCCAGCTaGGTGTCTCTGTGGATGGCAACGTTGTGCTTTTGGTCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: WRSITVAFQSIRNSS*VSLWMATLCFWSCP
Trigger: AGGACAAGACCAAAAGCACAACGTTGCCATCCACAGAGACACTCAGCTGGAGTTCCGAATACTCTGAAATGCAACAGTTATCGACCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp TCTTTTTCTCTGTGCTTTCTAAGCGCTGTCGAGCCACGTGAGAAGTaGGTTCACTGGATGGCTTTGAGGAATTATCTGTACTGTCCACAC +
Preference number: 5 (lower is better)
Translates to: SFSLCFLSAVEPREK*VHWMALRNYLYCPH
Trigger: GTGTGGACAGTACAGATAATTCCTCAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTCGACAGCGCTTAGAAAGCACAGAGAAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGACAAGCTGGAGACTGGCCATaGCCTATCAAACTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: CLYTVYGCNLAFVGVRGQAGDWP*PIKLFR
Trigger: CCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAGC...TTGTCCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CAA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACGCTGGAGACTGGCCATaGCCTATCAAACTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: MKCMELLDASEMNVKPRNAGDWP*PIKLFR
Trigger: CCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAGC...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAATGGAGCTTGGGGTATTaGTCCCATAGCCTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEWSLGY*SHSLRK
Trigger: CTTCCTCAGGCTATGGGACAAATACCCCAAGCTCCA...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCATGGCGATACTTTCTGTaGTGCAGAAGTGTTTGGATA +
Preference number: 5 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPWRYFL*CRSVWI
Trigger: TATCCAAACACTTCTGCACAACAGAAAGTATCGCCA...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCGTCAGTTTTGATTCCTaGGCCTTCTTTGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSVSFDS*AFFGMA
Trigger: GGCCATGCCAAAGAAGGCCAAGGAATCAAAACTGAC...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGACCCTAGGGATGTCAGTTTaGATTCCTTGGCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: ALHGGHSHTVLVCKVTKTLGMSV*IPWPSL
Trigger: CAAAGAAGGCCAAGGAATCAAAACTGACATCCCTAG...GGTCTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGCTAGGGATGTCAGTTTaGATTCCTTGGCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKLGMSV*IPWPSL
Trigger: CAAAGAAGGCCAAGGAATCAAAACTGACATCCCTAG...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGTCAGTATCTGAAGAGTaGGAGGTCGATAACTGTTGC +
Preference number: 5 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKSVSEE*EVDNCC
Trigger: GCAACAGTTATCGACCTCCAACTCTTCAGATACTGA...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGGTTCACTGGATGGCTTaGAGGAATTATCTGTACTGT +
Preference number: 5 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGVHWMA*RNYLYC
Trigger: ACAGTACAGATAATTCCTCAAAGCCATCCAGTGAAC...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACGGGAGTGTGGGGACATaGGGCTTCCCAATGGAGATA +
Preference number: 5 (lower is better)
Translates to: MKCMELLDASEMNVKPRNGSVGT*GFPMEI
Trigger: TATCTCCATTGGGAAGCCCAATGTCCCCACACTCCC...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GGTTTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACTGCTCTGGGAGGAATTaGTACCTGACGGAAAATCGG +
Preference number: 5 (lower is better)
Translates to: GFYFSHTSPSLTTLLSYYCSGRN*YLTENR
Trigger: CCGATTTTCCGTCAGGTACAAATTCCTCCCAGAGCA...GTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGACAAAGCTTTGTGGTTTGTTTTaGCATGCGCCCATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: WALHGGHSHTVLVCKVTKLCGLF*HAPMLS
Trigger: AGAAAGCATGGGCGCATGCAAAAACAAACCACAAAG...CTTTGTCACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTGTAAGGTGTCATCTTGGCTATCTTaGTGGTTTGTTTTTGCATGC +
Preference number: 5 (lower is better)
Translates to: SLWALHGGHSHTVLVCKVSSWLS*WFVFAC
Trigger: GCATGCAAAAACAAACCACAAAGATAGCCAAGATGA...CACCTTACAAACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCCCATACAGTGCTGGTTTCATCTTGGCTATCTTaGTGGTTTGTTTTTGCATGC +
Preference number: 5 (lower is better)
Translates to: LLMSLWALHGGHSHTVLVSSWLS*WFVFAC
Trigger: GCATGCAAAAACAAACCACAAAGATAGCCAAGATGA...AACCAGCACTGTATGGGAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATATTTGGTGGGTGGGGGTaGTTGAGGGCCACTACCTCC +
Preference number: 5 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIFGGWG*LRATTS
Trigger: GGAGGTAGTGGCCCTCAACAACCCCCACCCACCAAA...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp GGAAAACCAAGGCAGGTATATAAGACACATGTAGGTCTCAAAAGGTCTAGATTGCAGGCCACATCTGGGTaGCTGCATTTCCGAAACGGC +
Preference number: 5 (lower is better)
Translates to: GKPRQVYKTHVGLKRSRLQATSG*LHFRNG
Trigger: GCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCTG...CAATCTAGACCTTTTGAGACCTACATGTGTCTTATATACCTGCCTTGGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CAA 90 bp GGCACATCTTACAACCACACAGAGACTGACCAAAGGGAACACGGGAGAAATCCTATCAAACTCTTCCGGTaGCTTGTTCGGCAAAGACTT +
Preference number: 5 (lower is better)
Translates to: GTSYNHTETDQREHGRNPIKLFR*LVRQRL
Trigger: AAGTCTTTGCCGAACAAGCAACCGGAAGAGTTTGAT...AGGATTTCTCCCGTGTTCCCTTTGGTCAGTCTCTGTGTGGTTGTAAGATGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTCTTGTTCGGCAACGTTaGACCAAGCAATTCCACTTC +
Preference number: 5 (lower is better)
Translates to: LATVLPVTTGKASGRKFPLVRQR*TKQFHF
Trigger: GAAGTGGAATTGCTTGGTCAAACGTTGCCGAACAAG...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194446.7
CDS TCA 90 bp ACTAGTTGCTTGATAAATGCCAGTTCTCCACTTTCAGAGCGATCGTaGGCCTCCTGGAGCAACTTGTCCAGTTTGTGCTGCAACTCAAAA +
Preference number: 5 (lower is better)
Translates to: TSCLINASSPLSERS*ASWSNLSSLCCNSK
Trigger: TTTTGAGTTGCAGCACAAACTGGACAAGTTGCTCCAGGAGGCTCACGATCGCTCTGAAAGTGGAGAACTGGCATTTATCAAGCAACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp GAGGAATTATCTGTACTGTCCACACACTCGCTTCGCCCATTTATCTaGTCCAAGTGCTCTGAAAAACTGCCAACTGACAGTGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: EELSVLSTHSLRPFI*SKCSEKLPTDSVEL
Trigger: CAGTTCCACACTGTCAGTTGGCAGTTTTTCAGAGCACTTGGATCAGATAAATGGGCGAAGCGAGTGTGTGGACAGTACAGATAATTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 90 bp CATCCGGCCCTTGTAACTGTTTCTCCTGGCTGGTCCCGTTTTGATTaGTGTGTTTTCAAATGGAGTAGTGGTGATAGACACCTTATTCCC +
Preference number: 5 (lower is better)
Translates to: HPALVTVSPGWSRFD*CVFKWSSGDRHLIP
Trigger: GGGAATAAGGTGTCTATCACCACTACTCCATTTGAAAACACATCAATCAAAACGGGACCAGCCAGGAGAAACAGTTACAAGGGCCGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 90 bp TTGCATTTCAGAGTATTCGGAACTCCAGCTGAGTGTCTCTGTGGATaGCAACGTTGTGCTTTTGGTCTTGTCCTCAGAGTCATCTTTGTC +
Preference number: 5 (lower is better)
Translates to: LHFRVFGTPAECLCG*QRCAFGLVLRVIFV
Trigger: GACAAAGATGACTCTGAGGACAAGACCAAAAGCACAACGTTGCCATCCACAGAGACACTCAGCTGGAGTTCCGAATACTCTGAAATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCATTCCTTGGACTGTCTaGAGGGCTATTTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSIPWTV*RAISCM
Trigger: CATGCAGGAAATAGCCCTCAAGACAGTCCAAGGAAT...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATGGGGGAGAAATTCCTaGGACTGTCTTGAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEWGRNS*DCLEGY
Trigger: ATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCCA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTTCCTGTCTCTCCTCCTCCTTATGAGCCTCTGGGCTCTGCATGGAGGACATTCGTTGTGCAGAAGTGTTaGGATAAGAAGTGTAATTCA +
Preference number: 5 (lower is better)
Translates to: FPVSPPPYEPLGSAWRTFVVQKC*DKKCNS
Trigger: TGAATTACACTTCTTATCCAAACACTTCTGCACAAC...GAATGTCCTCCATGCAGAGCCCAGAGGCTCATAAGGAGGAGGAGAGACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCTCTAAAGGGTCCTTATaGAGTCCCAGCTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFSKGSL*SPSWLM
Trigger: CATCAGCCAGCTGGGACTCAATAAGGACCCTTTAGA...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGTCCTTTTCAGGCCAGTaGATTTCATCACTGATGACT +
Preference number: 5 (lower is better)
Translates to: LFLTSSSLGRQVLYKHYLSFSGQ*ISSLMT
Trigger: AGTCATCAGTGATGAAATCAACTGGCCTGAAAAGGA...CAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGTTGTGCTTTTGGTCTaGTCCTCAGAGTCATCTTTG +
Preference number: 5 (lower is better)
Translates to: SLPHQLIAGKAGFVQTLSVVLLV*SSESSL
Trigger: CAAAGATGACTCTGAGGACAAGACCAAAAGCACAAC...AGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCAAGCCAGAGCTGAGTTaGCACCTGTTGCTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSKPELS*HLLLSV
Trigger: TACTGAAAGCAACAGGTGCAAACTCAGCTCTGGCTT...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCTGGCAACAGTTTTAGACTCTCCTTCTTCTaGGACTTCTTGCTTCGTCTC +
Preference number: 5 (lower is better)
Translates to: QLIAGKAGFVQTLSGNSFRLSFF*DFLLRL
Trigger: GAGACGAAGCAAGAAGTCCAAGAAGAAGGAGAGTCT...AAAACTGTTGCCAGATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATGCTCTGGGAGGAATTaGTACCTGACGGAAAATCGG +
Preference number: 5 (lower is better)
Translates to: YKHYLATVLPVTTGKASGCSGRN*YLTENR
Trigger: CCGATTTTCCGTCAGGTACAAATTCCTCCCAGAGCA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AAAACACATAGGTGGAGGCATACACACGCAGTTACGGGTGGGTTTCTATTTTTCCGGCCAGCTAAGGCTTaGAGAGGAACAAAGGAAACT +
Preference number: 5 (lower is better)
Translates to: KTHRWRHTHAVTGGFLFFRPAKA*RGTKET
Trigger: AGTTTCCTTTGTTCCTCTCAAAGCCTTAGCTGGCCG...GAAAAATAGAAACCCACCCGTAACTGCGTGTGTATGCCTCCACCTATGTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACACTACCTCCAGGCCTTaGCGAAGTCTGTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: MKCMELLDASEMNVKPRNTTSRP*RSLFLP
Trigger: AGGAAGGAACAGACTTCGCAAAGGCCTGGAGGTAGT...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTCTGTAGCCAGGGACTGCCTGCTAGACACTTTTCTTCTTCATATTGCCGTGTTATCAAACTCTTCCGGTaGCTTGTTCGGCAAAGACTT +
Preference number: 5 (lower is better)
Translates to: LCSQGLPARHFSSSYCRVIKLFR*LVRQRL
Trigger: AAGTCTTTGCCGAACAAGCAACCGGAAGAGTTTGAT...AACACGGCAATATGAAGAAGAAAAGTGTCTAGCAGGCAGTCCCTGGCTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CAA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAGTAATTCATCTGGGGTaGGCTGGTATGGTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: HGATRCIRNECETQELAKVIHLG*AGMVAG
Trigger: ACCAGCTACCATACCAGCCAACCCCAGATGAATTAC...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCCTTTTCCTTTCCTTTTGCCATCACCAACTGGCTTGGCAACCAAGGGCAACCAGTTGTGCAGAAGTGTTaGGATAAGAAGTGTAATTCA +
Preference number: 5 (lower is better)
Translates to: PFSFPFAITNWLGNQGQPVVQKC*DKKCNS
Trigger: TGAATTACACTTCTTATCCAAACACTTCTGCACAAC...TGGTTGCCCTTGGTTGCCAAGCCAGTTGGTGATGGCAAAAGGAAAGGAAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CCTCCGGTGAAGACCAGACATATAACCCAGAGACAAGGACCATTGCCTTTTGGGGTTGTGCAGAAGTGTTaGGATAAGAAGTGTAATTCA +
Preference number: 5 (lower is better)
Translates to: PPVKTRHITQRQGPLPFGVVQKC*DKKCNS
Trigger: TGAATTACACTTCTTATCCAAACACTTCTGCACAAC...CCCAAAAGGCAATGGTCCTTGTCTCTGGGTTATATGTCTGGTCTTCACCGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTCCTTTTCAGGCCAGTaGATTTCATCACTGATGACT +
Preference number: 5 (lower is better)
Translates to: LATVLPVTTGKASGRKFPSFSGQ*ISSLMT
Trigger: AGTCATCAGTGATGAAATCAACTGGCCTGAAAAGGA...AGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAATCCTCCGATTCCAGTaGGGGAATAAATTCCGCCTT +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEILRFQ*GNKFRL
Trigger: AAGGCGGAATTTATTCCCCAACTGGAATCGGAGGAT...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACGAATATGTGCTTCTTGGACTCACAGCATAAAGGCCTGAGGGTAGAGCTTAGAGTTGTGCTTTTGGTCTaGTCCTCAGAGTCATCTTTG +
Preference number: 5 (lower is better)
Translates to: TNMCFLDSQHKGLRVELRVVLLV*SSESSL
Trigger: CAAAGATGACTCTGAGGACAAGACCAAAAGCACAAC...TCTAAGCTCTACCCTCAGGCCTTTATGCTGTGAGTCCAAGAAGCACATATTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCTCTTCCTCACCAGCTCATCGCTGGGAAGGCAGGTTTTGTACAAACACTATCCTGGCTGGTCCCGTTTaGATTGATGTGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: FSSSPAHRWEGRFCTNTILAGPV*IDVFSN
Trigger: ATTTGAAAACACATCAATCAAAACGGGACCAGCCAG...GATAGTGTTTGTACAAAACCTGCCTTCCCAGCGATGAGCTGGTGAGGAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTCTTCTTGGACTTCTaGCTTCGTCTCACCATCCGG +
Preference number: 5 (lower is better)
Translates to: MKCMELLDASEMNVKPRNFFLDF*LRLTIR
Trigger: CCGGATGGTGAGACGAAGCAAGAAGTCCAAGAAGAA...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TTCTATTTTTCACACACCTCCCCCAGCCTGACCACTTTGCTTTCTTACTACGTTAGACTCTCCTTCTTCTaGGACTTCTTGCTTCGTCTC +
Preference number: 5 (lower is better)
Translates to: FYFSHTSPSLTTLLSYYVRLSFF*DFLLRL
Trigger: GAGACGAAGCAAGAAGTCCAAGAAGAAGGAGAGTCT...AACGTAGTAAGAAAGCAAAGTGGTCAGGCTGGGGGAGGTGTGTGAAAAATAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAAGACTCTCCTTCTTCTaGGACTTCTTGCTTCGTCTC +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLERLSFF*DFLLRL
Trigger: GAGACGAAGCAAGAAGTCCAAGAAGAAGGAGAGTCT...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTTGCTTGGCCAGCTTCTaGAAGAGAGATCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFCLASF*KRDLLL
Trigger: AAGGAGGAGATCTCTCTTCAAGAAGCTGGCCAAGCA...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTAGTGCCCTCGATCGGCTaGAGACATGAAACTGACCTG +
Preference number: 5 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLVPSIG*RHETDL
Trigger: CAGGTCAGTTTCATGTCTCAAGCCGATCGAGGGCAC...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TGCTTGTATACAGTATATGGGTGCAACTTAGCATTTGTTGGGGTCAGAGGACAAAACTCTTCCGGTTGCTaGTTCGGCAAAGACTTCCTC +
Preference number: 5 (lower is better)
Translates to: CLYTVYGCNLAFVGVRGQNSSGC*FGKDFL
Trigger: GAGGAAGTCTTTGCCGAACAAGCAACCGGAAGAGTT...TTGTCCTCTGACCCCAACAAATGCTAAGTTGCACCCATATACTGTATACAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164111.2
CDS-3UTR CAA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACTCTTCCGGTTGCTaGTTCGGCAAAGACTTCCTC +
Preference number: 5 (lower is better)
Translates to: HGATRCIRNECETQELAKNSSGC*FGKDFL
Trigger: GAGGAAGTCTTTGCCGAACAAGCAACCGGAAGAGTT...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAATCAAACTCTTCCGGTaGCTTGTTCGGCAACGTTTG +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEIKLFR*LVRQRL
Trigger: CAAACGTTGCCGAACAAGCAACCGGAAGAGTTTGAT...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194446.7
CDS-3UTR CAA 90 bp ATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCTTTCGGACTAGTTGCTaGATAAATGCCAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: IWQQFYRLLLGRHLEESSFRTSC*INASSP
Trigger: TGGAGAACTGGCATTTATCAAGCAACTAGTCCGAAA...GGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAGTCTCAGGGAAGTATTaGAGCTACTCACTGACTCAT +
Preference number: 5 (lower is better)
Translates to: YKHYLATVLPVTTGKASGVSGKY*SYSLTH
Trigger: ATGAGTCAGTGAGTAGCTCAAATACTTCCCTGAGAC...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGTCTCAGGGAAGTATTaGAGCTACTCACTGACTCAT +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEVSGKY*SYSLTH
Trigger: ATGAGTCAGTGAGTAGCTCAAATACTTCCCTGAGAC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATCAGTATCTGAAGAGTaGGAGGTCGATAACTGTTGC +
Preference number: 5 (lower is better)
Translates to: YKHYLATVLPVTTGKASGSVSEE*EVDNCC
Trigger: GCAACAGTTATCGACCTCCAACTCTTCAGATACTGA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGTGGAGCTTGGGGTATTaGTCCCATAGCCTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKWSLGY*SHSLRK
Trigger: CTTCCTCAGGCTATGGGACAAATACCCCAAGCTCCA...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTAGTAATTCATCTGGGGTaGGCTGGTATGGTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLVIHLG*AGMVAG
Trigger: ACCAGCTACCATACCAGCCAACCCCAGATGAATTAC...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAATTTCGGACTAGTTGCTaGATAAATGCCAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEFRTSC*INASSP
Trigger: TGGAGAACTGGCATTTATCAAGCAACTAGTCCGAAA...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACGTCTCAGGGAAGTATTaGAGCTACTCACTGACTCAT +
Preference number: 5 (lower is better)
Translates to: MKCMELLDASEMNVKPRNVSGKY*SYSLTH
Trigger: ATGAGTCAGTGAGTAGCTCAAATACTTCCCTGAGAC...GTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGCAAACACTTTATTGCACAGATCCTAACAAACTGAAGCTGGTAAGTCTACAGATCCTCCGATTCCAGTaGGGGAATAAATTCCGCCTT +
Preference number: 5 (lower is better)
Translates to: LQTLYCTDPNKLKLVSLQILRFQ*GNKFRL
Trigger: AAGGCGGAATTTATTCCCCAACTGGAATCGGAGGAT...CTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAATAAAGTGTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAATCAGTATCTGAAGAGTaGGAGGTCGATAACTGTTGC +
Preference number: 5 (lower is better)
Translates to: HGATRCIRNECETQELAKSVSEE*EVDNCC
Trigger: GCAACAGTTATCGACCTCCAACTCTTCAGATACTGA...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAGTTCACTGGATGGCTTaGAGGAATTATCTGTACTGT +
Preference number: 5 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEEVHWMA*RNYLYC
Trigger: ACAGTACAGATAATTCCTCAAAGCCATCCAGTGAAC...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAACTGGCTGGTCCCGTTTaGATTGATGTGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLELAGPV*IDVFSN
Trigger: ATTTGAAAACACATCAATCAAAACGGGACCAGCCAG...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAACTTTGTGGTTTGTTTTaGCATGCGCCCATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: HGATRCIRNECETQELAKLCGLF*HAPMLS
Trigger: AGAAAGCATGGGCGCATGCAAAAACAAACCACAAAG...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATAATTCCTTGGACTGTCTaGAGGGCTATTTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: YFYKWSLELFSDHRPKHIIPWTV*RAISCM
Trigger: CATGCAGGAAATAGCCCTCAAGACAGTCCAAGGAAT...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTTGGCGATACTTTCTGTaGTGCAGAAGTGTTTGGATA +
Preference number: 5 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFWRYFL*CRSVWI
Trigger: TATCCAAACACTTCTGCACAACAGAAAGTATCGCCA...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAATGGCGATACTTTCTGTaGTGCAGAAGTGTTTGGATA +
Preference number: 5 (lower is better)
Translates to: HGATRCIRNECETQELAKWRYFL*CRSVWI
Trigger: TATCCAAACACTTCTGCACAACAGAAAGTATCGCCA...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATATCTGAGCTGTGGCCTTaGGGAACCTTTCTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: YFYKWSLELFSDHRPKHISELWP*GTFLCR
Trigger: TCTACAAAGAAAGGTTCCCAAAGGCCACAGCTCAGA...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTCTGGCTGGTCCCGTTTaGATTGATGTGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFLAGPV*IDVFSN
Trigger: ATTTGAAAACACATCAATCAAAACGGGACCAGCCAG...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGTTCTTCTTGGACTTCTaGCTTCGTCTCACCATCCGG +
Preference number: 5 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKFFLDF*LRLTIR
Trigger: CCGGATGGTGAGACGAAGCAAGAAGTCCAAGAAGAA...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGATCAATATTGGCCAGCTaGCTGTCTAGTTTTTCACTT +
Preference number: 5 (lower is better)
Translates to: YKHYLATVLPVTTGKASGSILAS*LSSFSL
Trigger: AAGTGAAAAACTAGACAGCAAGCTGGCCAATATTGA...TCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAATTATTTACTTTTAAGTaGGCTGAGGAAGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: NTIWQQFYRLLLGRHLEELFTFK*AEEGSL
Trigger: GAGAGAGCCTTCCTCAGCCAACTTAAAAGTAAATAA...TTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ACAAACACTATCTGGCAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGTTGTGCAGAAGTGTTaGGATAAGAAGTGTAATTCA +
Preference number: 5 (lower is better)
Translates to: TNTIWQQFYRLLLGRHLEVVQKC*DKKCNS
Trigger: TGAATTACACTTCTTATCCAAACACTTCTGCACAAC...TTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTGCCAGATAGTGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTATCCTCCGATTCCAGTaGGGGAATAAATTCCGCCTT +
Preference number: 5 (lower is better)
Translates to: KRLCYEMHGATRCIRNECILRFQ*GNKFRL
Trigger: AAGGCGGAATTTATTCCCCAACTGGAATCGGAGGAT...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp TACTTCTACAAATGGAGCCTTGAACTATTCTCAGACCACAGACCAAAACACATATCAGTATCTGAAGAGTaGGAGGTCGATAACTGTTGC +
Preference number: 5 (lower is better)
Translates to: YFYKWSLELFSDHRPKHISVSEE*EVDNCC
Trigger: GCAACAGTTATCGACCTCCAACTCTTCAGATACTGA...TATGTGTTTTGGTCTGTGGTCTGAGAATAGTTCAAGGCTCCATTTGTAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CAACAGTTTTACCGGTTACTACTGGGAAGGCATCTGGAAGAAAGTTCCCTTTTTTCAATATTGGCCAGCTaGCTGTCTAGTTTTTCACTT +
Preference number: 5 (lower is better)
Translates to: QQFYRLLLGRHLEESSLFSILAS*LSSFSL
Trigger: AAGTGAAAAACTAGACAGCAAGCTGGCCAATATTGA...AAAAAGGGAACTTTCTTCCAGATGCCTTCCCAGTAGTAACCGGTAAAACTGTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000167058.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CATGGAGCTACTCGATGCATCAGAAATGAATGTGAAACCCAGGAACTTGCTAAATTATTTACTTTTAAGTaGGCTGAGGAAGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HGATRCIRNECETQELAKLFTFK*AEEGSL
Trigger: GAGAGAGCCTTCCTCAGCCAACTTAAAAGTAAATAA...TTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGATGCATCGAGTAGCTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp CTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCCATTAATCAAACTCTTCCGGTaGCTTGTTCGGCAAAGACTT +
Preference number: 5 (lower is better)
Translates to: LHCVLVSKCHLTIQNKPLIKLFR*LVRQRL
Trigger: AAGTCTTTGCCGAACAAGCAACCGGAAGAGTTTGAT...TAATGGCTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGCTAGGGATGTCAGTTTaGATTCCTTGGCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKLGMSV*IPWPSL
Trigger: CAAAGAAGGCCAAGGAATCAAAACTGACATCCCTAG...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGATCAAACTCTTCCGGTaGCTTGTTCGGCAAAGACTT +
Preference number: 5 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKIKLFR*LVRQRL
Trigger: AAGTCTTTGCCGAACAAGCAACCGGAAGAGTTTGAT...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp AAGAGATTGTGTTATGAAATGCATGGAGCTACTCGATGCATCAGAAATGAATGTTTTCGGACTAGTTGCTaGATAAATGCCAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: KRLCYEMHGATRCIRNECFRTSC*INASSP
Trigger: TGGAGAACTGGCATTTATCAAGCAACTAGTCCGAAA...ACATTCATTTCTGATGCATCGAGTAGCTCCATGCATTTCATAACACAATCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS-3UTR CAA 90 bp ATTTGTCTGCATTGTGTCTTAGTCAGCAAGTGCCATCTTACAATTCAAAACAAGTTATTTACTTTTAAGTaGGCTGAGGAAGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: ICLHCVLVSKCHLTIQNKLFTFK*AEEGSL
Trigger: GAGAGAGCCTTCCTCAGCCAACTTAAAAGTAAATAA...CTTGTTTTGAATTGTAAGATGGCACTTGCTGACTAAGACACAATGCAGACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS GCA 72 bp CCGCCGAAGAGACTAGGGTCCGGGCGCCGTGTCCGCTaGAGCCCCGGGGCACGGGCTCAGGCGCCTCGGAAA +
Preference number: 6 (lower is better)
Translates to: PPKRLGSGRRVR*SPGARAQAPRK
Trigger: TTTCCGAGGCGCCTGAGCCCGTGCCCCGGGGCTGCAGCGGACACGGCGCCCGGACCCTAGTCTCTTCGGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 72 bp GCGGCCGCGGCGGCTGCGACCTGCAGGAGAAGCGGCTaGGCTCCCCTTCCTCCGACAGAGTTTCCGAGCCAG +
Preference number: 6 (lower is better)
Translates to: AAAAAATCRRSG*APLPPTEFPSQ
Trigger: CTGGCTCGGAAACTCTGTCGGAGGAAGGGGAGCCCAGCCGCTTCTCCTGCAGGTCGCAGCCGCCGCGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS GCA 72 bp GCGAGGGAGCCGATTGGCCAAGGGCCTGGCTGCGCATaGGCACGAGGTTGGACGTCTCCGCCGAAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: AREPIGQGPGCA*ARGWTSPPKQA
Trigger: GGCCTGCTTCGGCGGAGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCCTTGGCCAATCGGCTCCCTCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 72 bp TCTTCATCCTGCTCCTCTTGGGATGCGCTGCTGACCTaGGGCACCGGCAGCACCGCTCCTCCCGGGTGCGGC +
Preference number: 6 (lower is better)
Translates to: SSSCSSWDALLT*GTGSTAPPGCG
Trigger: GCCGCACCCGGGAGGAGCGGTGCTGCCGGTGCCCCAGGTCAGCAGCGCATCCCAAGAGGAGCAGGATGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS GCA 72 bp CCCACCTTCCGGGACACGGGGCGTTTCAGACAGCCTTaGTCCACTGGCCTGGCCCGACTGAGGGAAGGAGCG +
Preference number: 6 (lower is better)
Translates to: PTFRDTGRFRQP*STGLARLREGA
Trigger: CGCTCCTTCCCTCAGTCGGGCCAGGCCAGTGGAGCAAGGCTGTCTGAAACGCCCCGTGTCCCGGAAGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GCCCACCTTCCGGGACACGGGGCGTTTCAGACAGCCTaGCTCCACTGGCCTGGCCCGACTGAGGGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: AHLPGHGAFQTA*LHWPGPTEGRS
Trigger: GCTCCTTCCCTCAGTCGGGCCAGGCCAGTGGAGCAAGGCTGTCTGAAACGCCCCGTGTCCCGGAAGGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp CCGACTTCCGTCTTCCAGAGCGGTATCGCTGCCCGCTaGGTTTGGGAGCCAGGCCATGGAGGGTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: PTSVFQSGIAAR*VWEPGHGGCWA
Trigger: GGCCCAGCACCCTCCATGGCCTGGCTCCCAAACTCAGCGGGCAGCGATACCGCTCTGGAAGACGGAAGTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp CCTTCCCCATGCCCATGGGTGGCCTCTCTGAGCCTCTaGGTCCGGTCTCGCCGTGGTGGAGAGAAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PSPCPWVASLSL*VRSRRGGEKGW
Trigger: CCAGCCCTTCTCTCCACCACGGCGAGACCGGACTCAGAGGCTCAGAGAGGCCACCCATGGGCATGGGGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp CTCTTCGGGGGAGGCTCAGCTCCTTCAAGCTGGCTGTaGGCGAGGGAGCCGATTGGCCAAGGGCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: LFGGGSAPSSWL*AREPIGQGPGC
Trigger: GCAGCCAGGCCCTTGGCCAATCGGCTCCCTCGCTCACAGCCAGCTTGAAGGAGCTGAGCCTCCCCCGAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 72 bp CGGTATCGCTGCCCGCTGAGTTTGGGAGCCAGGCCATaGAGGGTGCTGGGCCGGATGTGCCCTGAACCTGCT +
Preference number: 6 (lower is better)
Translates to: RYRCPLSLGARP*RVLGRMCPEPA
Trigger: AGCAGGTTCAGGGCACATCCGGCCCAGCACCCTCCATGGCCTGGCTCCCAAACTCAGCGGGCAGCGATACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CCCCGTCTGAGGTCACCCCCTCGCTGGCCCTCACGCTaGCCTGCTTGTGAAGAGTGTCCTTCAGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PRLRSPPRWPSR*PACEECPSAGC
Trigger: GCAGCCTGCTGAAGGACACTCTTCACAAGCAGGCCAGCGTGAGGGCCAGCGAGGGGGTGACCTCAGACGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CGCCGAAGCAGGCCAGGCCTGTCCTGCTACCGGGTTTaGAAGGAGGTACCTCCCTGTGAGGGCTCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: RRSRPGLSCYRV*KEVPPCEGSSQ
Trigger: CTGGGAGGAGCCCTCACAGGGAGGTACCTCCTTCCAAACCCGGTAGCAGGACAGGCCTGGCCTGCTTCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CAA 90 bp CTCTTGCCTGCCCACCTTCCGGGACACGGGGCGTTTCAGACAGCCTaGCTCCACTGGCCTGGCCCGACTGAGGGAAGGAGCGTCACACAC +
Preference number: 6 (lower is better)
Translates to: LLPAHLPGHGAFQTA*LHWPGPTEGRSVTH
Trigger: GTGTGTGACGCTCCTTCCCTCAGTCGGGCCAGGCCAGTGGAGCAAGGCTGTCTGAAACGCCCCGTGTCCCGGAAGGTGGGCAGGCAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp GTCACCCCCTCGCTGGCCCTCACGCTGGCCTGCTTGTaGAGAGTGTCCTTCAGCAGGCTGCCCACAGAAGGC +
Preference number: 6 (lower is better)
Translates to: VTPSLALTLACL*RVSFSRLPTEG
Trigger: GCCTTCTGTGGGCAGCCTGCTGAAGGACACTCTTCACAAGCAGGCCAGCGTGAGGGCCAGCGAGGGGGTGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp GAGAGGGTGTCCTGGCCAGCGGGGAGAGAGGGATGCTaGCAGCCGACTTCCGTCTTCCAGAGCGGTATCGCT +
Preference number: 6 (lower is better)
Translates to: ERVSWPAGREGC*QPTSVFQSGIA
Trigger: AGCGATACCGCTCTGGAAGACGGAAGTCGGCTGGCAGCATCCCTCTCTCCCCGCTGGCCAGGACACCCTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp TGGGAGAGGGTGTCCTGGCCAGCGGGGAGAGAGGGATaGTGCCAGCCGACTTCCGTCTTCCAGAGCGGTATC +
Preference number: 6 (lower is better)
Translates to: WERVSWPAGREG*CQPTSVFQSGI
Trigger: GATACCGCTCTGGAAGACGGAAGTCGGCTGGCAGCATCCCTCTCTCCCCGCTGGCCAGGACACCCTCTCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp AGAGAAGCCCTTCCCCATGCCCATGGGTGGCCTCTCTaGGCCTCTGAGTCCGGTCTCGCCGTGGTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: REALPHAHGWPL*ASESGLAVVER
Trigger: TCTCTCCACCACGGCGAGACCGGACTCAGAGGCTCAGAGAGGCCACCCATGGGCATGGGGAAGGGCTTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp GCTTGTCCCGGTCCAGGTCATCCACAGACTCTTGCCTaGCCACCTTCCGGGACACGGGGCGTTTCAGACAGC +
Preference number: 6 (lower is better)
Translates to: ACPGPGHPQTLA*PPSGTRGVSDS
Trigger: GCTGTCTGAAACGCCCCGTGTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGGATGACCTGGACCGGGACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp GTTGGACGTCTCCGCCGAAGCAGGCCAGGCCTGTCCTaGTACCGGGTTTGGAAGGAGGTACCTCCCTGTGAG +
Preference number: 6 (lower is better)
Translates to: VGRLRRSRPGLS*YRVWKEVPPCE
Trigger: CTCACAGGGAGGTACCTCCTTCCAAACCCGGTAGCAGGACAGGCCTGGCCTGCTTCGGCGGAGACGTCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 72 bp CATTGTGTAGGGTCTGCCCTGGGCCAGGGAGGTTCCTaGTGTCAGTGGAGCGGTCTTGGTGTGTGGCGGGAC +
Preference number: 6 (lower is better)
Translates to: HCVGSALGQGGS*CQWSGLGVWRD
Trigger: GTCCCGCCACACACCAAGACCGCTCCACTGACACCAGGAACCTCCCTGGCCCAGGGCAGACCCTACACAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp TCCGGTCTCGCCGTGGTGGAGAGAAGGGCTGGCCTCTaGCTTGTAGCCCTCTGGGGCTGCGACATAAAGTGC +
Preference number: 6 (lower is better)
Translates to: SGLAVVERRAGL*LVALWGCDIKC
Trigger: GCACTTTATGTCGCAGCCCCAGAGGGCTACAAGCCAGAGGCCAGCCCTTCTCTCCACCACGGCGAGACCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GAGGCTGGGCGAGCTCTCTCCCTTTGGGTTCTCCTGTaGCAGCAGTTACTGACAGTGCCCTGCCTCGGTGGC +
Preference number: 6 (lower is better)
Translates to: EAGRALSLWVLL*QQLLTVPCLGG
Trigger: GCCACCGAGGCAGGGCACTGTCAGTAACTGCTGCCACAGGAGAACCCAAAGGGAGAGAGCTCGCCCAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp TCCGGTGGGAGTGGGGCACGTGTACACAGCCTGGGTAGGTCCACATaGTGTAGGGTCTGCCCTGGGCCAGGGAGGTTCCTGGTGTCAGTG +
Preference number: 6 (lower is better)
Translates to: SGGSGARVHSLGRST*CRVCPGPGRFLVSV
Trigger: CACTGACACCAGGAACCTCCCTGGCCCAGGGCAGACCCTACACAATGTGGACCTACCCAGGCTGTGTACACGTGCCCCACTCCCACCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp TTTCATGGTCACAGCAGGCGGGGGACCGTCCAGGGCTaGGACTCCGGGAACGTGGACGCATGGGTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: FHGHSRRGTVQG*DSGNVDAWVCF
Trigger: GAAACACACCCATGCGTCCACGTTCCCGGAGTCTCAGCCCTGGACGGTCCCCCGCCTGCTGTGACCATGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099202.10
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp CTTGGCAGAGGGTTCCTTCAGACATGGCTTCTCCTTTaGGGGCGTCCCTTCCGGTGGGAGTGGGGCACGTGT +
Preference number: 6 (lower is better)
Translates to: LGRGFLQTWLLL*GRPFRWEWGTC
Trigger: ACACGTGCCCCACTCCCACCGGAAGGGACGCCCGCAAAGGAGAAGCCATGTCTGAAGGAACCCTCTGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp TATGTGGTCAAGCTCTTCATCCTGCTCCTCTTGGGATaGGCTGCTGACCTGGGGCACCGGCAGCACCGCTCC +
Preference number: 6 (lower is better)
Translates to: YVVKLFILLLLG*AADLGHRQHRS
Trigger: GGAGCGGTGCTGCCGGTGCCCCAGGTCAGCAGCGCATCCCAAGAGGAGCAGGATGAAGAGCTTGACCACATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 72 bp GGTCAAGAGAGGACTACAGGGGCTGCCCGGGCTGGATaGGGTGGGACTCAGGCTCCTTGGAGTGAGATCCAA +
Preference number: 6 (lower is better)
Translates to: GQERTTGAARAG*GGTQAPWSEIQ
Trigger: TTGGATCTCACTCCAAGGAGCCTGAGTCCCACCCCATCCAGCCCGGGCAGCCCCTGTAGTCCTCTCTTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099202.10
CDS CAA 72 bp CTCCCAGGAAGAGCTAGTGGCACACATGGTCCCACGTaGATGCCTGGGCTGGGACTCTGTGCAGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: LPGRASGTHGPT*MPGLGLCAGSG
Trigger: CCCAGAGCCTGCACAGAGTCCCAGCCCAGGCATCAACGTGGGACCATGTGTGCCACTAGCTCTTCCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp TGGGCCAGGGAGGTTCCTGGTGTCAGTGGAGCGGTCTaGGTGTGTGGCGGGACCACCCTCTTTCTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: WAREVPGVSGAV*VCGGTTLFLLK
Trigger: CTTCAGCAGAAAGAGGGTGGTCCCGCCACACACCAAGACCGCTCCACTGACACCAGGAACCTCCCTGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp AGTGGGGCACGTGTACACAGCCTGGGTAGGTCCACATaGTGTAGGGTCTGCCCTGGGCCAGGGAGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: SGARVHSLGRST*CRVCPGPGRFL
Trigger: CAGGAACCTCCCTGGCCCAGGGCAGACCCTACACAATGTGGACCTACCCAGGCTGTGTACACGTGCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp GAGCTCTGCACGGTGGCAGAGGGTGACCTTTTCATACCGCTGGGCTaGCCTGTTTCAGCCAGTGACTTCTGGGGACCTGGCCCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: ELCTVAEGDLFIPLG*PVSASDFWGPGPFP
Trigger: GGGGAAAGGGCCAGGTCCCCAGAAGTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGAAAAGGTCACCCTCTGCCACCGTGCAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp GCATTCTGTTTCCTGACTGGGGGAGGCTGGGCGAGCTCTCTCCCTTaGGGTTCTCCTGTGGCAGCAGTTACTGACAGTGCCCTGCCTCGG +
Preference number: 6 (lower is better)
Translates to: AFCFLTGGGWASSLP*GSPVAAVTDSALPR
Trigger: CCGAGGCAGGGCACTGTCAGTAACTGCTGCCACAGGAGAACCCAAAGGGAGAGAGCTCGCCCAGCCTCCCCCAGTCAGGAAACAGAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp TTCAGCTTGTCCCGGTCCAGGTCATCCACAGACTCTTaGCTGCCCACCTTCCGGGACACGGGGCGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: FSLSRSRSSTDS*LPTFRDTGRFR
Trigger: TCTGAAACGCCCCGTGTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGGATGACCTGGACCGGGACAAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp CGGTGGCAGAGGGTGACCTTTTCATACCGCTGGGCTTaGCTGTTTCAGCCAGTGACTTCTGGGGACCTGGCC +
Preference number: 6 (lower is better)
Translates to: RWQRVTFSYRWA*LFQPVTSGDLA
Trigger: GGCCAGGTCCCCAGAAGTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGAAAAGGTCACCCTCTGCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp AAGAGGGAGGGAGCGATCTGTGCTTGGGGCTGGGGGTaGTCTGGTCGCCTCTCTGCACGCATTCTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: KREGAICAWGWG*SGRLSARILFP
Trigger: AGGAAACAGAATGCGTGCAGAGAGGCGACCAGAGCACCCCCAGCCCCAAGCACAGATCGCTCCCTCCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp GGTGGCGGAGACAGTATGTGGTCAAGCTCTTCATCCTaGTCCTCTTGGGATGCGCTGCTGACCTGGGGCACC +
Preference number: 6 (lower is better)
Translates to: GGGDSMWSSSSS*SSWDALLTWGT
Trigger: GGTGCCCCAGGTCAGCAGCGCATCCCAAGAGGAGCAGGATGAAGAGCTTGACCACATACTGTCTCCGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 72 bp CCAGAAGCTGAGGCCCGCTTAAAGTCACCTAGAGACTaGCTGTGCTCCCCTGGTGTCAGGCTGCAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: PEAEARLKSPRD*LCSPGVRLQAA
Trigger: GGCAGCTTGCAGCCTGACACCAGGGGAGCACAGCCAGTCTCTAGGTGACTTTAAGCGGGCCTCAGCTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp TTTCAGAGGCTGGCGGGGTCTCTTGTTGCCCTGCCATaGGCCGTATGGGGTTCCCTGGCAGACATTCATGGG +
Preference number: 6 (lower is better)
Translates to: FQRLAGSLVALP*AVWGSLADIHG
Trigger: CCCATGAATGTCTGCCAGGGAACCCCATACGGCCCATGGCAGGGCAACAAGAGACCCCGCCAGCCTCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GACAGTATGTGGTCAAGCTCTTCATCCTGCTCCTCTTaGGATGCGCTGCTGACCTGGGGCACCGGCAGCACC +
Preference number: 6 (lower is better)
Translates to: DSMWSSSSSCSS*DALLTWGTGST
Trigger: GGTGCTGCCGGTGCCCCAGGTCAGCAGCGCATCCCAAGAGGAGCAGGATGAAGAGCTTGACCACATACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CAA 72 bp ACTTCCGTGTGGACGAGGCCGTGCACCGGCTCTCCGTaGATGTGTGTGATCAGATCCCCGGCCTTCAGTCCT +
Preference number: 6 (lower is better)
Translates to: TSVWTRPCTGSP*MCVIRSPAFSP
Trigger: AGGACTGAAGGCCGGGGATCTGATCACACACATCAACGGAGAGCCGGTGCACGGCCTCGTCCACACGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp AACCTTGGCTTTCAGCTTGTCCCGGTCCAGGTCATCCACAGACTCTaGCCTGCCCACCTTCCGGGACACGGGGCGTTTCAGACAGCCTTG +
Preference number: 6 (lower is better)
Translates to: NLGFQLVPVQVIHRL*PAHLPGHGAFQTAL
Trigger: CAAGGCTGTCTGAAACGCCCCGTGTCCCGGAAGGTGGGCAGGCAAGAGTCTGTGGATGACCTGGACCGGGACAAGCTGAAAGCCAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp TTCCCACTGCTCCCAGGAAGAGCTAGTGGCACACATGGTCCCACGTaGATGCCTGGGCTGGGACTCTGTGCAGGCTCTGGGGAAAGCAAC +
Preference number: 6 (lower is better)
Translates to: FPLLPGRASGTHGPT*MPGLGLCAGSGESN
Trigger: GTTGCTTTCCCCAGAGCCTGCACAGAGTCCCAGCCCAGGCATCAACGTGGGACCATGTGTGCCACTAGCTCTTCCTGGGAGCAGTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp AGCGGATTCTGCCTGAGGAGCAAGGTAATCAGCTCCTaGGCGTCTGGAGGAGGGGCCTCGTCCTTTTCAGGC +
Preference number: 6 (lower is better)
Translates to: SGFCLRSKVISS*ASGGGASSFSG
Trigger: GCCTGAAAAGGACGAGGCCCCTCCTCCAGACGCTCAGGAGCTGATTACCTTGCTCCTCAGGCAGAATCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp GCGGCAGCTTTGGTCCCGGGCTCCTTCTTTAAAGTGTaGCTCGGAGAACTGCCGTGCTGCCAGGATGCTGAG +
Preference number: 6 (lower is better)
Translates to: AAALVPGSFFKV*LGELPCCQDAE
Trigger: CTCAGCATCCTGGCAGCACGGCAGTTCTCCGAGTCACACTTTAAAGAAGGAGCCCGGGACCAAAGCTGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp GCTGTGGATGACAATGGGCTGATGCGGACTGGCAGATaGTGCAGAAGAGTCTCGGCTGGGAGAGGAATCCCG +
Preference number: 6 (lower is better)
Translates to: AVDDNGLMRTGR*CRRVSAGRGIP
Trigger: CGGGATTCCTCTCCCAGCCGAGACTCTTCTGCAGCATCTGCCAGTCCGCATCAGCCCATTGTCATCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CTGAGTACACTCCTCAGAGGGAGGGACAGGTTTCTCTaGCTCCTCTCTGGGGTCTCCAGAGCAAGGGACAGC +
Preference number: 6 (lower is better)
Translates to: LSTLLRGRDRFL*LLSGVSRARDS
Trigger: GCTGTCCCTTGCTCTGGAGACCCCAGAGAGGAGCCAGAGAAACCTGTCCCTCCCTCTGAGGAGTGTACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CACGTTGATGCCTGGGCTGGGACTCTGTGCAGGCTCTaGGGAAAGCAACTCTGTTTTGGAGGCGTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: HVDAWAGTLCRL*GKQLCFGGVRS
Trigger: GGACCTCACGCCTCCAAAACAGAGTTGCTTTCCCCAGAGCCTGCACAGAGTCCCAGCCCAGGCATCAACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GGAGAGCTTTTCTCGCTTCTCACCCTCAATTCCTGGTaGCTGAGGAGGGCACCGGGTAGCAGGAACTTCCGG +
Preference number: 6 (lower is better)
Translates to: GELFSLLTLNSW*LRRAPGSRNFR
Trigger: CCGGAAGTTCCTGCTACCCGGTGCCCTCCTCAGCCACCAGGAATTGAGGGTGAGAAGCGAGAAAAGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp TGTAGCAGATCGGGGAGTGTCATGAAGGCTGGTGCTTaGTTCTGCAGCGGCAGCTTTGGTCCCGGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: CSRSGSVMKAGA*FCSGSFGPGLL
Trigger: AAGGAGCCCGGGACCAAAGCTGCCGCTGCAGAACCAAGCACCAGCCTTCATGACACTCCCCGATCTGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CTGGTCTGCTGCTTCACTGAGATGTCCTTGTCTGGGTaGATGCTTCGCCTGCATCTCTGGGGGACACCCTCC +
Preference number: 6 (lower is better)
Translates to: LVCCFTEMSLSG*MLRLHLWGTPS
Trigger: GGAGGGTGTCCCCCAGAGATGCAGGCGAAGCATCCACCCAGACAAGGACATCTCAGTGAAGCAGCAGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp ACGGTGGCAGAGGGTGACCTTTTCATACCGCTGGGCTaGCCTGTTTCAGCCAGTGACTTCTGGGGACCTGGC +
Preference number: 6 (lower is better)
Translates to: TVAEGDLFIPLG*PVSASDFWGPG
Trigger: GCCAGGTCCCCAGAAGTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGAAAAGGTCACCCTCTGCCACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp AGCTCGATAACTTCCGTGTGGACGAGGCCGTGCACCGGCTCTCCGTaGATGTGTGTGATCAGATCCCCGGCCTTCAGTCCTGCCTGGTAT +
Preference number: 6 (lower is better)
Translates to: SSITSVWTRPCTGSP*MCVIRSPAFSPAWY
Trigger: ATACCAGGCAGGACTGAAGGCCGGGGATCTGATCACACACATCAACGGAGAGCCGGTGCACGGCCTCGTCCACACGGAAGTTATCGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp ACCAGCAATGAGTGGCTTCTGGTCTGCTGCTTCACTGAGATGTCCTaGTCTGGGTGGATGCTTCGCCTGCATCTCTGGGGGACACCCTCC +
Preference number: 6 (lower is better)
Translates to: TSNEWLLVCCFTEMS*SGWMLRLHLWGTPS
Trigger: GGAGGGTGTCCCCCAGAGATGCAGGCGAAGCATCCACCCAGACAAGGACATCTCAGTGAAGCAGCAGACCAGAAGCCACTCATTGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp ACCTGCCCTCTAGCTTATACTCGGAGGGGCTCTTCCTaGCAGGGGACTCGGGAGCAGCTAAGCCTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: TCPLAYTRRGSS*QGTREQLSLLS
Trigger: AGAAAGCAGGCTTAGCTGCTCCCGAGTCCCCTGTCAGGAAGAGCCCCTCCGAGTATAAGCTAGAGGGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp GCAGGCTCTGGGGAAAGCAACTCTGTTTTGGAGGCGTaGGGTCCAGACAGGAGAGCAATGTCCAGTGTGCCC +
Preference number: 6 (lower is better)
Translates to: AGSGESNSVLEA*GPDRRAMSSVP
Trigger: GGGCACACTGGACATTGCTCTCCTGTCTGGACCTCACGCCTCCAAAACAGAGTTGCTTTCCCCAGAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp CTTGCCCCTTCTCTGCCGAACCACGAAGTCTTTCTCTaGGGAAAGAGGGAGGGAGCGATCTGTGCTTGGGGC +
Preference number: 6 (lower is better)
Translates to: LAPSLPNHEVFL*GKREGAICAWG
Trigger: GCCCCAAGCACAGATCGCTCCCTCCCTCTTTCCTCAGAGAAAGACTTCGTGGTTCGGCAGAGAAGGGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp CTGGGTCCACTAGTCTCTGCCGATGTCGAGCTGAGTTaGAATGGCTCTTCGGAGGTTGCCCTTCCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: LGPLVSADVELS*NGSSEVALPGA
Trigger: GGCTCCAGGAAGGGCAACCTCCGAAGAGCCATTTCAACTCAGCTCGACATCGGCAGAGACTAGTGGACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS GCA 72 bp AGCAGGAGCTCGATAACTTCCGTGTGGACGAGGCCGTaGACCGGCTCTCCGTTGATGTGTGTGATCAGATCC +
Preference number: 6 (lower is better)
Translates to: SRSSITSVWTRP*TGSPLMCVIRS
Trigger: GGATCTGATCACACACATCAACGGAGAGCCGGTGCACGGCCTCGTCCACACGGAAGTTATCGAGCTCCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp ACATGGTCCCACGTTGATGCCTGGGCTGGGACTCTGTaGAGGCTCTGGGGAAAGCAACTCTGTTTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: TWSHVDAWAGTL*RLWGKQLCFGG
Trigger: GCCTCCAAAACAGAGTTGCTTTCCCCAGAGCCTGCACAGAGTCCCAGCCCAGGCATCAACGTGGGACCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp GCTCTCTCAGGCTGGTGGAGTCTCCCTTTTTCCCACTaGTCCCAGGAAGAGCTAGTGGCACACATGGTCCCA +
Preference number: 6 (lower is better)
Translates to: ALSGWWSLPFSH*SQEELVAHMVP
Trigger: TGGGACCATGTGTGCCACTAGCTCTTCCTGGGAGCAGTGGGAAAAAGGGAGACTCCACCAGCCTGAGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp GTGATTTTCCGAGGCCGCAGGCCACATCTGGGTTGCTaGATTTCCGAAACGGCATGGGTGGCGGAGACAGTA +
Preference number: 6 (lower is better)
Translates to: VIFRGRRPHLGC*ISETAWVAETV
Trigger: TACTGTCTCCGCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCTGCGGCCTCGGAAAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS GCA 72 bp TCAGTGATTTTCCGAGGCCGCAGGCCACATCTGGGTTaGTGCATTTCCGAAACGGCATGGGTGGCGGAGACA +
Preference number: 6 (lower is better)
Translates to: SVIFRGRRPHLG*CISETAWVAET
Trigger: TGTCTCCGCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCTGCGGCCTCGGAAAATCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 72 bp GGGGTTGGCTGGTATGGTAGCTGGTGCAACTTCTCCTaGGAAGAACAGGATGAGGAGACGGTGGAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: GVGWYGSWCNFS*EEQDEETVELG
Trigger: CCCAAGCTCCACCGTCTCCTCATCCTGTTCTTCCCAGGAGAAGTTGCACCAGCTACCATACCAGCCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099202.10
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CTGCCTGAGGAGCAAGGTAATCAGCTCCTGAGCGTCTaGAGGAGGGGCCTCGTCCTTTTCAGGCCAGTTGAT +
Preference number: 6 (lower is better)
Translates to: LPEEQGNQLLSV*RRGLVLFRPVD
Trigger: ATCAACTGGCCTGAAAAGGACGAGGCCCCTCCTCCAGACGCTCAGGAGCTGATTACCTTGCTCCTCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp TTCCCACTCTTCAGCAGGAGCTCGATAACTTCCGTGTaGACGAGGCCGTGCACCGGCTCTCCGTTGATGTGT +
Preference number: 6 (lower is better)
Translates to: FPLFSRSSITSV*TRPCTGSPLMC
Trigger: ACACATCAACGGAGAGCCGGTGCACGGCCTCGTCCACACGGAAGTTATCGAGCTCCTGCTGAAGAGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GGAGGTTCCTGGTGTCAGTGGAGCGGTCTTGGTGTGTaGCGGGACCACCCTCTTTCTGCTGAAGATTGCTCT +
Preference number: 6 (lower is better)
Translates to: GGSWCQWSGLGV*RDHPLSAEDCS
Trigger: AGAGCAATCTTCAGCAGAAAGAGGGTGGTCCCGCCACACACCAAGACCGCTCCACTGACACCAGGAACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CCAGCACTCAGCTTCTGTGAGGAGAGGGACCTGTCTTaGTGCTTAGACTTTGAAGGGCTGGGGTCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: PALSFCEERDLS*CLDFEGLGSGP
Trigger: TGGCCCTGACCCCAGCCCTTCAAAGTCTAAGCACCAAGACAGGTCCCTCTCCTCACAGAAGCTGAGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GCCCTGGGTGGTCAGGACAGCAGAAAATGTGTCCACTaGACCCTTGCTGCCACCCTTGCCTTCTCTGATGGA +
Preference number: 6 (lower is better)
Translates to: ALGGQDSRKCVH*TLAATLAFSDG
Trigger: TCCATCAGAGAAGGCAAGGGTGGCAGCAAGGGTCCAGTGGACACATTTTCTGCTGTCCTGACCACCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp TCTGCACGGTGGCAGAGGGTGACCTTTTCATACCGCTaGGCTTGCCTGTTTCAGCCAGTGACTTCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: SARWQRVTFSYR*ACLFQPVTSGD
Trigger: GTCCCCAGAAGTCACTGGCTGAAACAGGCAAGCCCAGCGGTATGAAAAGGTCACCCTCTGCCACCGTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CAGCGGCGCCCATCCGTTCTCCTCGCAAATGAGAAATaGGCTGAGGCACTGGGGGAGAAATTCCTTGGACTG +
Preference number: 6 (lower is better)
Translates to: QRRPSVLLANEK*AEALGEKFLGL
Trigger: CAGTCCAAGGAATTTCTCCCCCAGTGCCTCAGCCCATTTCTCATTTGCGAGGAGAACGGATGGGCGCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GCCACCCTTGCCTTCTCTGATGGAACCACCCAGGGGTaGAGTGACAGGCTCTTTGCCTTTTGCAGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: ATLAFSDGTTQG*SDRLFAFCRAS
Trigger: GCTGGCTCTGCAAAAGGCAAAGAGCCTGTCACTCAACCCCTGGGTGGTTCCATCAGAGAAGGCAAGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GCTGGGTCCACTAGTCTCTGCCGATGTCGAGCTGAGTaGAAATGGCTCTTCGGAGGTTGCCCTTCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: AGSTSLCRCRAE*KWLFGGCPSWS
Trigger: GCTCCAGGAAGGGCAACCTCCGAAGAGCCATTTCAACTCAGCTCGACATCGGCAGAGACTAGTGGACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS CAA 90 bp CTCTTTGGTGGGTGGGGGTTGTTGAGGGCCACTACCTCCAGGCCTTaGCGAAGTCTGTTCCTTCCTGTCTGGCTCTTTGGGAGCCTGTTT +
Preference number: 6 (lower is better)
Translates to: LFGGWGLLRATTSRP*RSLFLPVWLFGSLF
Trigger: AAACAGGCTCCCAAAGAGCCAGACAGGAAGGAACAGACTTCGCAAAGGCCTGGAGGTAGTGGCCCTCAACAACCCCCACCCACCAAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp ACCCTTGCTGCCACCCTTGCCTTCTCTGATGGAACCACCCAGGGGTaGAGTGACAGGCTCTTTGCCTTTTGCAGAGCCAGCACTCAGCTT +
Preference number: 6 (lower is better)
Translates to: TLAATLAFSDGTTQG*SDRLFAFCRASTQL
Trigger: AAGCTGAGTGCTGGCTCTGCAAAAGGCAAAGAGCCTGTCACTCAACCCCTGGGTGGTTCCATCAGAGAAGGCAAGGGTGGCAGCAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp AGAGGTGGAGAGGCGGAAGGAGGGCAGAGAGTCACTCTTTATCATTaGGCTTCGGCCGTCTCCTCCAGACTGAAGCTTCCTGTGGTCCCT +
Preference number: 6 (lower is better)
Translates to: RGGEAEGGQRVTLYH*ASAVSSRLKLPVVP
Trigger: AGGGACCACAGGAAGCTTCAGTCTGGAGGAGACGGCCGAAGCCAAATGATAAAGAGTGACTCTCTGCCCTCCTTCCGCCTCTCCACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp TTTGAAGCAGCTGGGTCCACTAGTCTCTGCCGATGTCGAGCTGAGTaGAAATGGCTCTTCGGAGGTTGCCCTTCCTGGAGCCCTCTCCGT +
Preference number: 6 (lower is better)
Translates to: FEAAGSTSLCRCRAE*KWLFGGCPSWSPLR
Trigger: ACGGAGAGGGCTCCAGGAAGGGCAACCTCCGAAGAGCCATTTCAACTCAGCTCGACATCGGCAGAGACTAGTGGACCCAGCTGCTTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239261.2
CDS TCA 72 bp GCGGATAGCACGGATGGTGAACCCATAGTTCTTGCCTaGGCTGTGGATGACAATGGGCTGATGCGGACTGGC +
Preference number: 6 (lower is better)
Translates to: ADSTDGEPIVLA*AVDDNGLMRTG
Trigger: GCCAGTCCGCATCAGCCCATTGTCATCCACAGCTCAGGCAAGAACTATGGGTTCACCATCCGTGCTATCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp CCTGGCAGAAGGATGAATGAGCTTCCTTTCCGGCTTTaGCTTCGGTTCTGGCCCAGAGGCTGCGAGAGAGTC +
Preference number: 6 (lower is better)
Translates to: PGRRMNELPFRL*LRFWPRGCERV
Trigger: GACTCTCTCGCAGCCTCTGGGCCAGAACCGAAGTCAAAGCCGGAAAGGAAGCTCATTCATCCTTCTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp AGCTTTTCTCGCTTCTCACCCTCAATTCCTGGTGGCTaGGGAGGGCACCGGGTAGCAGGAACTTCCGGTTTG +
Preference number: 6 (lower is better)
Translates to: SFSRFSPSIPGG*GGHRVAGTSGL
Trigger: CAAACCGGAAGTTCCTGCTACCCGGTGCCCTCCTCAGCCACCAGGAATTGAGGGTGAGAAGCGAGAAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp GCTGAGTTAGACAGCTCTTTGGTGGGTGGGGGTTGTTaGGGGCCACTACCTCCAGGCCTTTGCGAAGTCTGT +
Preference number: 6 (lower is better)
Translates to: AELDSSLVGGGC*GPLPPGLCEVC
Trigger: ACAGACTTCGCAAAGGCCTGGAGGTAGTGGCCCTCAACAACCCCCACCCACCAAAGAGCTGTCTAACTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp CCACCCTTGCCTTCTCTGATGGAACCACCCAGGGGTTaGGTGACAGGCTCTTTGCCTTTTGCAGAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: PPLPSLMEPPRG*VTGSLPFAEPA
Trigger: TGCTGGCTCTGCAAAAGGCAAAGAGCCTGTCACTCAACCCCTGGGTGGTTCCATCAGAGAAGGCAAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp TCTGCTGCTTCACTGAGATGTCCTTGTCTGGGTGGATaGTTCGCCTGCATCTCTGGGGGACACCCTCCATTG +
Preference number: 6 (lower is better)
Translates to: SAASLRCPCLGG*FACISGGHPPL
Trigger: CAATGGAGGGTGTCCCCCAGAGATGCAGGCGAAGCATCCACCCAGACAAGGACATCTCAGTGAAGCAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GATGCGGACTGGCAGATGCTGCAGAAGAGTCTCGGCTaGGAGAGGAATCCCGTGAAGAAGAAGGGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: DADWQMLQKSLG*ERNPVKKKGLK
Trigger: CTTCAGACCCTTCTTCTTCACGGGATTCCTCTCCCAGCCGAGACTCTTCTGCAGCATCTGCCAGTCCGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CATGAAGGCTGGTGCTTGGTTCTGCAGCGGCAGCTTTaGTCCCGGGCTCCTTCTTTAAAGTGTGACTCGGAG +
Preference number: 6 (lower is better)
Translates to: HEGWCLVLQRQL*SRAPSLKCDSE
Trigger: CTCCGAGTCACACTTTAAAGAAGGAGCCCGGGACCAAAGCTGCCGCTGCAGAACCAAGCACCAGCCTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp CCCGACCTTCTCCCTGCACAAGCACATCACTTGCTTTaGCCTGGGTGGTCAGGACAGCAGAAAATGTGTCCA +
Preference number: 6 (lower is better)
Translates to: PDLLPAQAHHLL*PGWSGQQKMCP
Trigger: TGGACACATTTTCTGCTGTCCTGACCACCCAGGGCAAAGCAAGTGATGTGCTTGTGCAGGGAGAAGGTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp CTGGAGACTGGCCATTGCCTATCAAACTCTTCCGGTTaGTTGTTCGGCAAAGACTTCCTCTTCGGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: LETGHCLSNSSG*LFGKDFLFGGG
Trigger: GCCTCCCCCGAAGAGGAAGTCTTTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000164111.2
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS CCA 72 bp ATGTGTGTGATCAGATCCCCGGCCTTCAGTCCTGCCTaGTATGCGGGACTTCCTTCTTCTACGTTCCAGACG +
Preference number: 6 (lower is better)
Translates to: MCVIRSPAFSPA*YAGLPSSTFQT
Trigger: CGTCTGGAACGTAGAAGAAGGAAGTCCCGCATACCAGGCAGGACTGAAGGCCGGGGATCTGATCACACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp AGGGACCGGTTTAAGCAGGAGAAACTTCGGCTGGTGTaGAGCAAAGGAGAAGGCTGCTTGGCCAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: RDRFKQEKLRLV*SKGEGCLASFL
Trigger: CAAGAAGCTGGCCAAGCAGCCTTCTCCTTTGCTCCACACCAGCCGAAGTTTCTCCTGCTTAAACCGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GCCATGGGCCGTATGGGGTTCCCTGGCAGACATTCATaGGCGCTAGATGTTATCTTGGGTTTCAGGATGGCA +
Preference number: 6 (lower is better)
Translates to: AMGRMGFPGRHS*ALDVILGFRMA
Trigger: TGCCATCCTGAAACCCAAGATAACATCTAGCGCCCATGAATGTCTGCCAGGGAACCCCATACGGCCCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GACTCTGTGCAGGCTCTGGGGAAAGCAACTCTGTTTTaGAGGCGTGAGGTCCAGACAGGAGAGCAATGTCCA +
Preference number: 6 (lower is better)
Translates to: DSVQALGKATLF*RREVQTGEQCP
Trigger: TGGACATTGCTCTCCTGTCTGGACCTCACGCCTCCAAAACAGAGTTGCTTTCCCCAGAGCCTGCACAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CGTCATCCCTCACGGCAGACCACTCGCTTTTCACCTTaGCAGAGGGTTCCTTCAGACATGGCTTCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: RHPSRQTTRFSP*QRVPSDMASPL
Trigger: CAAAGGAGAAGCCATGTCTGAAGGAACCCTCTGCCAAGGTGAAAAGCGAGTGGTCTGCCGTGAGGGATGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CTCCCTGCACAAGCACATCACTTGCTTTGCCCTGGGTaGTCAGGACAGCAGAAAATGTGTCCACTGGACCCT +
Preference number: 6 (lower is better)
Translates to: LPAQAHHLLCPG*SGQQKMCPLDP
Trigger: AGGGTCCAGTGGACACATTTTCTGCTGTCCTGACCACCCAGGGCAAAGCAAGTGATGTGCTTGTGCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp ACCCGACCTTCTCCCTGCACAAGCACATCACTTGCTTaGCCCTGGGTGGTCAGGACAGCAGAAAATGTGTCC +
Preference number: 6 (lower is better)
Translates to: TRPSPCTSTSLA*PWVVRTAENVS
Trigger: GGACACATTTTCTGCTGTCCTGACCACCCAGGGCAAAGCAAGTGATGTGCTTGTGCAGGGAGAAGGTCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GAGGCGGAAGGAGGGCAGAGAGTCACTCTTTATCATTaGGCTTCGGCCGTCTCCTCCAGACTGAAGCTTCCT +
Preference number: 6 (lower is better)
Translates to: EAEGGQRVTLYH*ASAVSSRLKLP
Trigger: AGGAAGCTTCAGTCTGGAGGAGACGGCCGAAGCCAAATGATAAAGAGTGACTCTCTGCCCTCCTTCCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GCTGGAGACTGGCCATTGCCTATCAAACTCTTCCGGTaGCTTGTTCGGCAAAGACTTCCTCTTCGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: AGDWPLPIKLFR*LVRQRLPLRGR
Trigger: CCTCCCCCGAAGAGGAAGTCTTTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000164111.2
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS CAA 72 bp GCTGGAGACTGGCCATTGCCTATCAAACTCTTCCGGTaGCTTGTTCGGCAACTTTGTGTGCGCCGAAGCCTG +
Preference number: 6 (lower is better)
Translates to: AGDWPLPIKLFR*LVRQLCVRRSL
Trigger: CAGGCTTCGGCGCACACAAAGTTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167462.8
ENSMUST00000171791.8
CDS CAA 72 bp GCTGGAGACTGGCCATTGCCTATCAAACTCTTCCGGTaGCTTGTTCGGCAATCCAAGGTCAGCCCCGGAATC +
Preference number: 6 (lower is better)
Translates to: AGDWPLPIKLFR*LVRQSKVSPGI
Trigger: GATTCCGGGGCTGACCTTGGATTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172264.8
CDS TCA 72 bp GGAGCACAGAAGCTTCTTGTCACTGCCATAGGAGGGTaGCAACTTTTCCTCCGACTGCACCCGTTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: GAQKLLVTAIGG*QLFLRLHPFQQ
Trigger: CTGCTGAAACGGGTGCAGTCGGAGGAAAAGTTGTCACCCTCCTATGGCAGTGACAAGAAGCTTCTGTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp TGTGATCAGATCCCCGGCCTTCAGTCCTGCCTGGTATaGGGGACTTCCTTCTTCTACGTTCCAGACGATATG +
Preference number: 6 (lower is better)
Translates to: CDQIPGLQSCLV*GTSFFYVPDDM
Trigger: CATATCGTCTGGAACGTAGAAGAAGGAAGTCCCGCATACCAGGCAGGACTGAAGGCCGGGGATCTGATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp GTTGATGTGTGTGATCAGATCCCCGGCCTTCAGTCCTaGCTGGTATGCGGGACTTCCTTCTTCTACGTTCCA +
Preference number: 6 (lower is better)
Translates to: VDVCDQIPGLQS*LVCGTSFFYVP
Trigger: TGGAACGTAGAAGAAGGAAGTCCCGCATACCAGGCAGGACTGAAGGCCGGGGATCTGATCACACACATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp GGCTATGCTTGCGGGAGCACAGAAGCTTCTTGTCACTaGCATAGGAGGGTGACAACTTTTCCTCCGACTGCA +
Preference number: 6 (lower is better)
Translates to: GYACGSTEASCH*HRRVTTFPPTA
Trigger: TGCAGTCGGAGGAAAAGTTGTCACCCTCCTATGGCAGTGACAAGAAGCTTCTGTGCTCCCGCAAGCATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp TCCCTCTGTACCTCCTCTTGTGTCACCTCTAGGCTATaGTTGCGGGAGCACAGAAGCTTCTTGTCACTGCCA +
Preference number: 6 (lower is better)
Translates to: SLCTSSCVTSRL*LREHRSFLSLP
Trigger: TGGCAGTGACAAGAAGCTTCTGTGCTCCCGCAAGCATAGCCTAGAGGTGACACAAGAGGAGGTACAGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp CGCTGGCCTGCTTGTGAAGAGTGTCCTTCAGCAGGCTaGCCACAGAAGGCAACTCTGCTGATGTGTTTTCAA +
Preference number: 6 (lower is better)
Translates to: RWPACEECPSAG*PQKATLLMCFQ
Trigger: TTGAAAACACATCAGCAGAGTTGCCTTCTGTGGGCAGCCTGCTGAAGGACACTCTTCACAAGCAGGCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp TGCACTCATCTGAGGTGTGTGGGTACTGTTGATGAATaGCCGGTTTTCAGAGGCTGGCGGGGTCTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: CTHLRCVGTVDE*PVFRGWRGLLL
Trigger: CAACAAGAGACCCCGCCAGCCTCTGAAAACCGGGCATTCATCAACAGTACCCACACACCTCAGATGAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp TCAGTGTGGACAATGATTGAGACCCGACCTTCTCCCTaGACAAGCACATCACTTGCTTTGCCCTGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: SVWTMIETRPSP*TSTSLALPWVV
Trigger: GACCACCCAGGGCAAAGCAAGTGATGTGCTTGTGCAGGGAGAAGGTCGGGTCTCAATCATTGTCCACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp CTGGAGACTGGCCATTGCCTATCAAACTCTTCCGGTTaGTTGTTCGGCAACTTTGTGTGCGCCGAAGCCTGT +
Preference number: 6 (lower is better)
Translates to: LETGHCLSNSSG*LFGNFVCAEAC
Trigger: ACAGGCTTCGGCGCACACAAAGTTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167462.8
ENSMUST00000171791.8
CDS GCA 72 bp CTGGAGACTGGCCATTGCCTATCAAACTCTTCCGGTTaGTTGTTCGGCAATCCAAGGTCAGCCCCGGAATCT +
Preference number: 6 (lower is better)
Translates to: LETGHCLSNSSG*LFGNPRSAPES
Trigger: AGATTCCGGGGCTGACCTTGGATTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172264.8
CDS CCA 72 bp GAGAGAGGTGAGTGTGGTCGAGGCAGTGCTGGAGACTaGCCATTGCCTATCAAACTCTTCCGGTTGCTTGTT +
Preference number: 6 (lower is better)
Translates to: ERGECGRGSAGD*PLPIKLFRLLV
Trigger: AACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAGCACTGCCTCGACCACACTCACCTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000099202.10
ENSMUST00000164111.2
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CCTTCTCCCTGCACAAGCACATCACTTGCTTTGCCCTaGGTGGTCAGGACAGCAGAAAATGTGTCCACTGGA +
Preference number: 6 (lower is better)
Translates to: PSPCTSTSLALP*VVRTAENVSTG
Trigger: TCCAGTGGACACATTTTCTGCTGTCCTGACCACCCAGGGCAAAGCAAGTGATGTGCTTGTGCAGGGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CACATCTGGGTTGCTGCATTTCCGAAACGGCATGGGTaGCGGAGACAGTATGTGGTCAAGCTCTTCATCCTG +
Preference number: 6 (lower is better)
Translates to: HIWVAAFPKRHG*RRQYVVKLFIL
Trigger: CAGGATGAAGAGCTTGACCACATACTGTCTCCGCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CCA 72 bp AGGCCACATCTGGGTTGCTGCATTTCCGAAACGGCATaGGTGGCGGAGACAGTATGTGGTCAAGCTCTTCAT +
Preference number: 6 (lower is better)
Translates to: RPHLGCCISETA*VAETVCGQALH
Trigger: ATGAAGAGCTTGACCACATACTGTCTCCGCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS CAA 72 bp GCCTCATCTTGTTCCCCATCTGTCGAAATAGCCAGCTaGGGGAGCAAGCCAGAGCTGAGTTTGCACCTGTTG +
Preference number: 6 (lower is better)
Translates to: ASSCSPSVEIAS*GSKPELSLHLL
Trigger: CAACAGGTGCAAACTCAGCTCTGGCTTGCTCCCCAAGCTGGCTATTTCGACAGATGGGGAACAAGATGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GGATGCTTCGCCTGCATCTCTGGGGGACACCCTCCATaGGTGTTTTTCAGTTTGGCATCGAGAGGACACTCT +
Preference number: 6 (lower is better)
Translates to: GCFACISGGHPP*VFFSLASRGHS
Trigger: AGAGTGTCCTCTCGATGCCAAACTGAAAAACACCAATGGAGGGTGTCCCCCAGAGATGCAGGCGAAGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp CACAGTGGATGGTTTGGGATGCTTTGGAGACGGGCTTaGCTTCTCACCAGCAATGAGTGGCTTCTGGTCTGC +
Preference number: 6 (lower is better)
Translates to: HSGWFGMLWRRA*LLTSNEWLLVC
Trigger: GCAGACCAGAAGCCACTCATTGCTGGTGAGAAGCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GAGACTGGCCATTGCCTATCAAACTCTTCCGGTTGCTaGTTCGGCAAAGACTTCCTCTTCGGGGGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: ETGHCLSNSSGC*FGKDFLFGGGS
Trigger: TGAGCCTCCCCCGAAGAGGAAGTCTTTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000164111.2
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000239261.2
CDS CAA 72 bp GAGACTGGCCATTGCCTATCAAACTCTTCCGGTTGCTaGTTCGGCAACTTTGTGTGCGCCGAAGCCTGTTCC +
Preference number: 6 (lower is better)
Translates to: ETGHCLSNSSGC*FGNFVCAEACS
Trigger: GGAACAGGCTTCGGCGCACACAAAGTTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167462.8
ENSMUST00000171791.8
CDS CAA 90 bp CCTCCCTGGCCAGGGACTTCACCTCATCTTGGCTATCTTTGTGGTTaGTTTTTGCATGCGCCCATGCTTTCTCCGAAGTCTGGGTCTGCT +
Preference number: 6 (lower is better)
Translates to: PPWPGTSPHLGYLCG*FLHAPMLSPKSGSA
Trigger: AGCAGACCCAGACTTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCACAAAGATAGCCAAGATGAGGTGAAGTCCCTGGCCAGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp GCTGAGTCCTCCCTGGCCAGGGACTTCACCTCATCTTGGCTATCTTaGTGGTTTGTTTTTGCATGCGCCCATGCTTTCTCCGAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: AESSLARDFTSSWLS*WFVFACAHAFSEVW
Trigger: CCAGACTTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCACAAAGATAGCCAAGATGAGGTGAAGTCCCTGGCCAGGGAGGACTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp GGCATCGAGAGGACACTCTTCAGTGTGGACAATGATTaGGACCCGACCTTCTCCCTGCACAAGCACATCACT +
Preference number: 6 (lower is better)
Translates to: GIERTLFSVDND*DPTFSLHKHIT
Trigger: AGTGATGTGCTTGTGCAGGGAGAAGGTCGGGTCTCAATCATTGTCCACACTGAAGAGTGTCCTCTCGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp CTTCCCATCCTCACTAAGCTGTCTCTTGTACTTCAGTaGTTTTCCGAGGCCGCAGGCCACATCTGGGTTGCT +
Preference number: 6 (lower is better)
Translates to: LPILTKLSLVLQ*FSEAAGHIWVA
Trigger: AGCAACCCAGATGTGGCCTGCGGCCTCGGAAAATCACTGAAGTACAAGAGACAGCTTAGTGAGGATGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164111.2
ENSMUST00000166726.8
ENSMUST00000167058.8
CDS TCA 72 bp CATTGGGCTTCCCAATGGAGATACAGCGAACATATCTaGCAGTGTGGAACTGCTGATGGTGCTGGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: HWASQWRYSEHI*QCGTADGAGWG
Trigger: ACCCCAGCCAGCACCATCAGCAGTTCCACACTGTCAGATATGTTCGCTGTATCTCCATTGGGAAGCCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166726.8
ENSMUST00000167462.8
CDS GCA 72 bp GCTTTGCTTCTCACCAGCAATGAGTGGCTTCTGGTCTaGTGCTTCACTGAGATGTCCTTGTCTGGGTGGATG +
Preference number: 6 (lower is better)
Translates to: ALLLTSNEWLLV*CFTEMSLSGWM
Trigger: CATCCACCCAGACAAGGACATCTCAGTGAAGCAGCAGACCAGAAGCCACTCATTGCTGGTGAGAAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp ACAGTGGATGGTTTGGGATGCTTTGGAGACGGGCTTTaGTTCTCACCAGCAATGAGTGGCTTCTGGTCTGCT +
Preference number: 6 (lower is better)
Translates to: TVDGLGCFGDGL*FSPAMSGFWSA
Trigger: AGCAGACCAGAAGCCACTCATTGCTGGTGAGAAGCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp AGGCCTTTTTGTGAGGACTGCTCCTTAAGGTCTCCTTaGCCCTTCTCTGCCGAACCACGAAGTCTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: RPFCEDCSLRSP*PFSAEPRSLSL
Trigger: CAGAGAAAGACTTCGTGGTTCGGCAGAGAAGGGGCAAGGAGACCTTAAGGAGCAGTCCTCACAAAAAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GATGCTTCGCCTGCATCTCTGGGGGACACCCTCCATTaGTGTTTTTCAGTTTGGCATCGAGAGGACACTCTT +
Preference number: 6 (lower is better)
Translates to: DASPASLGDTLH*CFSVWHREDTL
Trigger: AAGAGTGTCCTCTCGATGCCAAACTGAAAAACACCAATGGAGGGTGTCCCCCAGAGATGCAGGCGAAGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CTTTGGAGACGGGCTTTGCTTCTCACCAGCAATGAGTaGCTTCTGGTCTGCTGCTTCACTGAGATGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LWRRALLLTSNE*LLVCCFTEMSL
Trigger: CAAGGACATCTCAGTGAAGCAGCAGACCAGAAGCCACTCATTGCTGGTGAGAAGCAAAGCCCGTCTCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CCGTTCTCCTCGCAAATGAGAAATGGGCTGAGGCACTaGGGGAGAAATTCCTTGGACTGTCTTGAGGGCTAT +
Preference number: 6 (lower is better)
Translates to: PFSSQMRNGLRH*GRNSLDCLEGY
Trigger: ATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCCAGTGCCTCAGCCCATTTCTCATTTGCGAGGAGAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GACAGGAGAGCAATGTCCAGTGTGCCCTCGATCGGCTaGAGACATGAAACTGACCTGCCCTCTAGCTTATAC +
Preference number: 6 (lower is better)
Translates to: DRRAMSSVPSIG*RHETDLPSSLY
Trigger: GTATAAGCTAGAGGGCAGGTCAGTTTCATGTCTCAAGCCGATCGAGGGCACACTGGACATTGCTCTCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp CAAGGGACAGCCTCATCTTGTTCCCCATCTGTCGAAATAGCCAGCTaGGGGAGCAAGCCAGAGCTGAGTTTGCACCTGTTGCTTTCAGTA +
Preference number: 6 (lower is better)
Translates to: QGTASSCSPSVEIAS*GSKPELSLHLLLSV
Trigger: TACTGAAAGCAACAGGTGCAAACTCAGCTCTGGCTTGCTCCCCAAGCTGGCTATTTCGACAGATGGGGAACAAGATGAGGCTGTCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp CTAAGCGCTGTCGAGCCACGTGAGAAGTGGGTTCACTGGATGGCTTaGAGGAATTATCTGTACTGTCCACACACTCGCTTCGCCCATTTA +
Preference number: 6 (lower is better)
Translates to: LSAVEPREKWVHWMA*RNYLYCPHTRFAHL
Trigger: TAAATGGGCGAAGCGAGTGTGTGGACAGTACAGATAATTCCTCAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTCGACAGCGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp TCATGTTTCTCTTCTGGTTTCTTTACGACAACCTTGGCTTTCAGCTaGTCCCGGTCCAGGTCATCCACAGACTCTTGCCTGCCCACCTTC +
Preference number: 6 (lower is better)
Translates to: SCFSSGFFTTTLAFS*SRSRSSTDSCLPTF
Trigger: GAAGGTGGGCAGGCAAGAGTCTGTGGATGACCTGGACCGGGACAAGCTGAAAGCCAAGGTTGTCGTAAAGAAACCAGAAGAGAAACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp TTAGGGTCGCACAGTCTCCCCCTTCTACATACTCCATaGCCATGCATAAGTGACGCCTCGTTTCAAAGGAGC +
Preference number: 6 (lower is better)
Translates to: LGSHSLPLLHTP*PCISDASFQRS
Trigger: GCTCCTTTGAAACGAGGCGTCACTTATGCATGGTCATGGAGTATGTAGAAGGGGGAGACTGTGCGACCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp TCGAGCCACGTGAGAAGTGGGTTCACTGGATGGCTTTaGGGAATTATCTGTACTGTCCACACACTCGCTTCG +
Preference number: 6 (lower is better)
Translates to: SSHVRSGFTGWL*GIICTVHTLAS
Trigger: CGAAGCGAGTGTGTGGACAGTACAGATAATTCCTCAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp ACAGGAGAGCAATGTCCAGTGTGCCCTCGATCGGCTTaGGACATGAAACTGACCTGCCCTCTAGCTTATACT +
Preference number: 6 (lower is better)
Translates to: TGEQCPVCPRSA*DMKLTCPLAYT
Trigger: AGTATAAGCTAGAGGGCAGGTCAGTTTCATGTCTCAAGCCGATCGAGGGCACACTGGACATTGCTCTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp GTTTGGCATCGAGAGGACACTCTTCAGTGTGGACAATaGTTGAGACCCGACCTTCTCCCTGCACAAGCACAT +
Preference number: 6 (lower is better)
Translates to: VWHREDTLQCGQ*LRPDLLPAQAH
Trigger: ATGTGCTTGTGCAGGGAGAAGGTCGGGTCTCAATCATTGTCCACACTGAAGAGTGTCCTCTCGATGCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CTAAGCGCTGTCGAGCCACGTGAGAAGTGGGTTCACTaGATGGCTTTGAGGAATTATCTGTACTGTCCACAC +
Preference number: 6 (lower is better)
Translates to: LSAVEPREKWVH*MALRNYLYCPH
Trigger: GTGTGGACAGTACAGATAATTCCTCAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTCGACAGCGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GGGGTAATCTTTCACAGTGGATGGTTTGGGATGCTTTaGAGACGGGCTTTGCTTCTCACCAGCAATGAGTGG +
Preference number: 6 (lower is better)
Translates to: GVIFHSGWFGML*RRALLLTSNEW
Trigger: CCACTCATTGCTGGTGAGAAGCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGAAAGATTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp TGCACAGACTGGGGTAATCTTTCACAGTGGATGGTTTaGGATGCTTTGGAGACGGGCTTTGCTTCTCACCAG +
Preference number: 6 (lower is better)
Translates to: CTDWGNLSQWMV*DALETGFASHQ
Trigger: CTGGTGAGAAGCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGAAAGATTACCCCAGTCTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CTGTCTGCACAGACTGGGGTAATCTTTCACAGTGGATaGTTTGGGATGCTTTGGAGACGGGCTTTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: LSAQTGVIFHSG*FGMLWRRALLL
Trigger: GAGAAGCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGAAAGATTACCCCAGTCTGTGCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CTGTCTGTCTGCACAGACTGGGGTAATCTTTCACAGTaGATGGTTTGGGATGCTTTGGAGACGGGCTTTGCT +
Preference number: 6 (lower is better)
Translates to: LSVCTDWGNLSQ*MVWDALETGFA
Trigger: AGCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGAAAGATTACCCCAGTCTGTGCAGACAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GATGGCTTGGGCTTCTGTCTGTCTGTCTGCACAGACTaGGGTAATCTTTCACAGTGGATGGTTTGGGATGCT +
Preference number: 6 (lower is better)
Translates to: DGLGFCLSVCTD*GNLSQWMVWDA
Trigger: AGCATCCCAAACCATCCACTGTGAAAGATTACCCCAGTCTGTGCAGACAGACAGACAGAAGCCCAAGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp ATGAGAAATGGGCTGAGGCACTGGGGGAGAAATTCCTaGGACTGTCTTGAGGGCTATTTCCTGCATGAGCAG +
Preference number: 6 (lower is better)
Translates to: MRNGLRHWGRNS*DCLEGYFLHEQ
Trigger: CTGCTCATGCAGGAAATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCCAGTGCCTCAGCCCATTTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000099202.10
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GCGTCTGGAGGAGGGGCCTCGTCCTTTTCAGGCCAGTaGATTTCATCACTGATGACTTGTCCAAATAGCTCT +
Preference number: 6 (lower is better)
Translates to: ASGGGASSFSGQ*ISSLMTCPNSS
Trigger: AGAGCTATTTGGACAAGTCATCAGTGATGAAATCAACTGGCCTGAAAAGGACGAGGCCCCTCCTCCAGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GTCGAGCCACGTGAGAAGTGGGTTCACTGGATGGCTTaGAGGAATTATCTGTACTGTCCACACACTCGCTTC +
Preference number: 6 (lower is better)
Translates to: VEPREKWVHWMA*RNYLYCPHTRF
Trigger: GAAGCGAGTGTGTGGACAGTACAGATAATTCCTCAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GTGTGGAGCAAAGGAGAAGGCTGCTTGGCCAGCTTCTaGAAGAGAGATCTCCTCCTTTCTAGACTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: VWSKGEGCLASF*KRDLLLSRLSF
Trigger: GAAGGAGAGTCTAGAAAGGAGGAGATCTCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTTGCTCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp TCTTCTGGTTTCTTTACGACAACCTTGGCTTTCAGCTaGTCCCGGTCCAGGTCATCCACAGACTCTTGCCTG +
Preference number: 6 (lower is better)
Translates to: SSGFFTTTLAFS*SRSRSSTDSCL
Trigger: CAGGCAAGAGTCTGTGGATGACCTGGACCGGGACAAGCTGAAAGCCAAGGTTGTCGTAAAGAAACCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GCTGGAGACTGGCCATTGCCTATCAAACTCTTCCGGTaGCTTGTTCGGCAACGTTTGACCAAGCAATTCCAC +
Preference number: 6 (lower is better)
Translates to: AGDWPLPIKLFR*LVRQRLTKQFH
Trigger: GTGGAATTGCTTGGTCAAACGTTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194446.7
CDS CAA 90 bp CCATCTGTCGAAATAGCCAGCTTGGGGAGCAAGCCAGAGCTGAGTTaGCACCTGTTGCTTTCAGTATCTGAAGAGTTGGAGGTCGATAAC +
Preference number: 6 (lower is better)
Translates to: PSVEIASLGSKPELS*HLLLSVSEELEVDN
Trigger: GTTATCGACCTCCAACTCTTCAGATACTGAAAGCAACAGGTGCAAACTCAGCTCTGGCTTGCTCCCCAAGCTGGCTATTTCGACAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp CGTATGGGGTTCCCTGGCAGACATTCATGGGCGCTAGATGTTATCTaGGGTTTCAGGATGGCACAGTGGCTGTCATCTTTGTCATCCAAT +
Preference number: 6 (lower is better)
Translates to: RMGFPGRHSWALDVI*GFRMAQWLSSLSSN
Trigger: ATTGGATGACAAAGATGACAGCCACTGTGCCATCCTGAAACCCAAGATAACATCTAGCGCCCATGAATGTCTGCCAGGGAACCCCATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp TGGCCAGGGACTTCACCTCATCTTGGCTATCTTTGTGGTTTGTTTTaGCATGCGCCCATGCTTTCTCCGAAGTCTGGGTCTGCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: WPGTSPHLGYLCGLF*HAPMLSPKSGSACR
Trigger: TCTACAAGCAGACCCAGACTTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCACAAAGATAGCCAAGATGAGGTGAAGTCCCTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp GTAATCTTTCACAGTGGATGGTTTGGGATGCTTTGGAGACGGGCTTaGCTTCTCACCAGCAATGAGTGGCTTCTGGTCTGCTGCTTCACT +
Preference number: 6 (lower is better)
Translates to: VIFHSGWFGMLWRRA*LLTSNEWLLVCCFT
Trigger: AGTGAAGCAGCAGACCAGAAGCCACTCATTGCTGGTGAGAAGCAAAGCCCGTCTCCAAAGCATCCCAAACCATCCACTGTGAAAGATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp TTGATAAATGCCAGTTCTCCACTTTCAGAGCGATCGTaGGCCTCCTGGAGCAACTTGTCCAGTTTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LINASSPLSERS*ASWSNLSSLCC
Trigger: GCAGCACAAACTGGACAAGTTGCTCCAGGAGGCTCACGATCGCTCTGAAAGTGGAGAACTGGCATTTATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp TGTGGAGCAAAGGAGAAGGCTGCTTGGCCAGCTTCTTaGAGAGAGATCTCCTCCTTTCTAGACTCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: CGAKEKAAWPAS*REISSFLDSPS
Trigger: AGAAGGAGAGTCTAGAAAGGAGGAGATCTCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTTGCTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp CTGGAGACTGGCCATTGCCTATCAAACTCTTCCGGTTaGTTGTTCGGCAACTCCAGAAGTGAAAGGTCAAGA +
Preference number: 6 (lower is better)
Translates to: LETGHCLSNSSG*LFGNSRSERSR
Trigger: TCTTGACCTTTCACTTCTGGAGTTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099202.10
CDS CCA 72 bp CATTTCTCCTCGCAAATGAGAAATGGGCTGAGGCACTaGGGGAGAAATTCCTTGGACTGTCTTGAGGGCTAT +
Preference number: 6 (lower is better)
Translates to: HFSSQMRNGLRH*GRNSLDCLEGY
Trigger: ATAGCCCTCAAGACAGTCCAAGGAATTTCTCCCCCAGTGCCTCAGCCCATTTCTCATTTGCGAGGAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099202.10
ENSMUST00000172264.8
CDS CCA 72 bp GTGGACGCATGGGTGTGTTTCTGCACCGGTTCTCAGTaGCGATACTTTCTGTTGTGCAGAAGTGTTTGGATA +
Preference number: 6 (lower is better)
Translates to: VDAWVCFCTGSQ*RYFLLCRSVWI
Trigger: TATCCAAACACTTCTGCACAACAGAAAGTATCGCCACTGAGAACCGGTGCAGAAACACACCCATGCGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099202.10
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp AGAGTATTCGGAACTCCAGCTGAGTGTCTCTGTGGATaGCAACGTTGTGCTTTTGGTCTTGTCCTCAGAGTC +
Preference number: 6 (lower is better)
Translates to: RVFGTPAECLCG*QRCAFGLVLRV
Trigger: GACTCTGAGGACAAGACCAAAAGCACAACGTTGCCATCCACAGAGACACTCAGCTGGAGTTCCGAATACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp CTGTGCTTTCTAAGCGCTGTCGAGCCACGTGAGAAGTaGGTTCACTGGATGGCTTTGAGGAATTATCTGTAC +
Preference number: 6 (lower is better)
Translates to: LCFLSAVEPREK*VHWMALRNYLY
Trigger: GTACAGATAATTCCTCAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTCGACAGCGCTTAGAAAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp AGTATTCAACCTTTCCAGGAGCAGGCCTATCAGAGATaGGGCACACACTATCATGGAGAATGCCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: SIQPFQEQAYQR*GTHYHGECQKL
Trigger: CAGCTTCTGGCATTCTCCATGATAGTGTGTGCCCCATCTCTGATAGGCCTGCTCCTGGAAAGGTTGAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp GAGACTGGCCATTGCCTATCAAACTCTTCCGGTTGCTaGTTCGGCAACTCCAGAAGTGAAAGGTCAAGAGAG +
Preference number: 6 (lower is better)
Translates to: ETGHCLSNSSGC*FGNSRSERSRE
Trigger: CTCTCTTGACCTTTCACTTCTGGAGTTGCCGAACAAGCAACCGGAAGAGTTTGATAGGCAATGGCCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099202.10
CDS CAA 72 bp AGCTTGGGGAGCAAGCCAGAGCTGAGTTTGCACCTGTaGCTTTCAGTATCTGAAGAGTTGGAGGTCGATAAC +
Preference number: 6 (lower is better)
Translates to: SLGSKPELSLHL*LSVSEELEVDN
Trigger: GTTATCGACCTCCAACTCTTCAGATACTGAAAGCAACAGGTGCAAACTCAGCTCTGGCTTGCTCCCCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp TTCCCTGGCAGACATTCATGGGCGCTAGATGTTATCTaGGGTTTCAGGATGGCACAGTGGCTGTCATCTTTG +
Preference number: 6 (lower is better)
Translates to: FPGRHSWALDVI*GFRMAQWLSSL
Trigger: CAAAGATGACAGCCACTGTGCCATCCTGAAACCCAAGATAACATCTAGCGCCCATGAATGTCTGCCAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp ATCTCTGGGGGACACCCTCCATTGGTGTTTTTCAGTTaGGCATCGAGAGGACACTCTTCAGTGTGGACAATG +
Preference number: 6 (lower is better)
Translates to: ISGGHPPLVFFS*ASRGHSSVWTM
Trigger: CATTGTCCACACTGAAGAGTGTCCTCTCGATGCCAAACTGAAAAACACCAATGGAGGGTGTCCCCCAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp CAAAATCACTCTCTCGGGGTTTCCTTCGAAGTCTCAGGGAAGTATTaGAGCTACTCACTGACTCATCCATCTCTGGTGTCTCTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: QNHSLGVSFEVSGKY*SYSLTHPSLVSLLS
Trigger: GGACAGCAGAGACACCAGAGATGGATGAGTCAGTGAGTAGCTCAAATACTTCCCTGAGACTTCGAAGGAAACCCCGAGAGAGTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp TTCTGGTGCGATTCATGTTTCTCTTCTGGTTTCTTTACGACAACCTaGGCTTTCAGCTTGTCCCGGTCCAGGTCATCCACAGACTCTTGC +
Preference number: 6 (lower is better)
Translates to: FWCDSCFSSGFFTTT*AFSLSRSRSSTDSC
Trigger: GCAAGAGTCTGTGGATGACCTGGACCGGGACAAGCTGAAAGCCAAGGTTGTCGTAAAGAAACCAGAAGAGAAACATGAATCGCACCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp AATGATCTGATGGTGAGTGAAACTAAGTACCCCATCTaGCAAGGGGAGAACATGGTCTGGAGAGTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: NDLMVSETKYPI*QGENMVWRVAG
Trigger: ACCAGCTACTCTCCAGACCATGTTCTCCCCTTGGCAGATGGGGTACTTAGTTTCACTCACCATCAGATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp ACCTCATCTTGGCTATCTTTGTGGTTTGTTTTTGCATaGGCCCATGCTTTCTCCGAAGTCTGGGTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: TSSWLSLWFVFA*AHAFSEVWVCL
Trigger: CAAGCAGACCCAGACTTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCACAAAGATAGCCAAGATGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp CTTCACCTCATCTTGGCTATCTTTGTGGTTTGTTTTTaGATGCGCCCATGCTTTCTCCGAAGTCTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: LHLILAIFVVCF*MRPCFLRSLGL
Trigger: CAGACCCAGACTTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCACAAAGATAGCCAAGATGAGGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GCTTGCTGTCTAGTTTTTCACTTCGAAGGAGCTCTTTaGCCTGAGAGGCCTTCTCCGAGTATTCAACCTTTC +
Preference number: 6 (lower is better)
Translates to: ACCLVFHFEGAL*PERPSPSIQPF
Trigger: GAAAGGTTGAATACTCGGAGAAGGCCTCTCAGGCCAAAGAGCTCCTTCGAAGTGAAAAACTAGACAGCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp TTTTTCAGTTTGGCATCGAGAGGACACTCTTCAGTGTaGACAATGATTGAGACCCGACCTTCTCCCTGCACA +
Preference number: 6 (lower is better)
Translates to: FFSLASRGHSSV*TMIETRPSPCT
Trigger: TGTGCAGGGAGAAGGTCGGGTCTCAATCATTGTCCACACTGAAGAGTGTCCTCTCGATGCCAAACTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp TCTCTCGGGGTTTCCTTCGAAGTCTCAGGGAAGTATTaGAGCTACTCACTGACTCATCCATCTCTGGTGTCT +
Preference number: 6 (lower is better)
Translates to: SLGVSFEVSGKY*SYSLTHPSLVS
Trigger: AGACACCAGAGATGGATGAGTCAGTGAGTAGCTCAAATACTTCCCTGAGACTTCGAAGGAAACCCCGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp GAAATAGCCAGCTTGGGGAGCAAGCCAGAGCTGAGTTTGCACCTGTaGCTTTCAGTATCTGAAGAGTTGGAGGTCGATAACTGTTGCATT +
Preference number: 6 (lower is better)
Translates to: EIASLGSKPELSLHL*LSVSEELEVDNCCI
Trigger: AATGCAACAGTTATCGACCTCCAACTCTTCAGATACTGAAAGCAACAGGTGCAAACTCAGCTCTGGCTTGCTCCCCAAGCTGGCTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp GCATGGGTGTGTTTCTGCACCGGTTCTCAGTGGCGATACTTTCTGTaGTGCAGAAGTGTTTGGATAAGAAGTGTAATTCATCTGGGGTTG +
Preference number: 6 (lower is better)
Translates to: AWVCFCTGSQWRYFL*CRSVWIRSVIHLGL
Trigger: CAACCCCAGATGAATTACACTTCTTATCCAAACACTTCTGCACAACAGAAAGTATCGCCACTGAGAACCGGTGCAGAAACACACCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000099202.10
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp TCTGTACTGTCCACACACTCGCTTCGCCCATTTATCTaGTCCAAGTGCTCTGAAAAACTGCCAACTGACAGT +
Preference number: 6 (lower is better)
Translates to: SVLSTHSLRPFI*SKCSEKLPTDS
Trigger: ACTGTCAGTTGGCAGTTTTTCAGAGCACTTGGATCAGATAAATGGGCGAAGCGAGTGTGTGGACAGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp TTTTTCTCTGTGCTTTCTAAGCGCTGTCGAGCCACGTaGGAAGTGGGTTCACTGGATGGCTTTGAGGAATTA +
Preference number: 6 (lower is better)
Translates to: FFSVLSKRCRAT*EVGSLDGFEEL
Trigger: TAATTCCTCAAAGCCATCCAGTGAACCCACTTCTCACGTGGCTCGACAGCGCTTAGAAAGCACAGAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp AAGGCTTTGAGAGGAACAAAGGAAACTGCACTCATCTaGGGTGTGTGGGTACTGTTGATGAATGCCCGGTTT +
Preference number: 6 (lower is better)
Translates to: KALRGTKETALI*GVWVLLMNARF
Trigger: AAACCGGGCATTCATCAACAGTACCCACACACCTCAGATGAGTGCAGTTTCCTTTGTTCCTCTCAAAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp GGGCGGGCAATGACAATTAGGATCTTTCGGACTAGTTaGTTGATAAATGCCAGTTCTCCACTTTCAGAGCGA +
Preference number: 6 (lower is better)
Translates to: GRAMTIRIFRTS*LINASSPLSER
Trigger: TCGCTCTGAAAGTGGAGAACTGGCATTTATCAAGCAACTAGTCCGAAAGATCCTAATTGTCATTGCCCGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp ATTCATGTTTCTCTTCTGGTTTCTTTACGACAACCTTaGCTTTCAGCTTGTCCCGGTCCAGGTCATCCACAG +
Preference number: 6 (lower is better)
Translates to: IHVSLLVSLRQP*LSACPGPGHPQ
Trigger: CTGTGGATGACCTGGACCGGGACAAGCTGAAAGCCAAGGTTGTCGTAAAGAAACCAGAAGAGAAACATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp ACTTCACCTCATCTTGGCTATCTTTGTGGTTTGTTTTaGCATGCGCCCATGCTTTCTCCGAAGTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: TSPHLGYLCGLF*HAPMLSPKSGS
Trigger: AGACCCAGACTTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCACAAAGATAGCCAAGATGAGGTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 90 bp AAGCCAGAGCTGAGTTTGCACCTGTTGCTTTCAGTATCTGAAGAGTaGGAGGTCGATAACTGTTGCATTTCAGAGTATTCGGAACTCCAG +
Preference number: 6 (lower is better)
Translates to: KPELSLHLLLSVSEE*EVDNCCISEYSELQ
Trigger: CTGGAGTTCCGAATACTCTGAAATGCAACAGTTATCGACCTCCAACTCTTCAGATACTGAAAGCAACAGGTGCAAACTCAGCTCTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS TCA 72 bp ATAACTGTTGCATTTCAGAGTATTCGGAACTCCAGCTaGGTGTCTCTGTGGATGGCAACGTTGTGCTTTTGG +
Preference number: 6 (lower is better)
Translates to: ITVAFQSIRNSS*VSLWMATLCFW
Trigger: CCAAAAGCACAACGTTGCCATCCACAGAGACACTCAGCTGGAGTTCCGAATACTCTGAAATGCAACAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp TTGGCTATCTTTGTGGTTTGTTTTTGCATGCGCCCATaGTTTCTCCGAAGTCTGGGTCTGCTTGTAGAAATC +
Preference number: 6 (lower is better)
Translates to: LAIFVVCFCMRP*FLRSLGLLVEI
Trigger: GATTTCTACAAGCAGACCCAGACTTCGGAGAAAGCATGGGCGCATGCAAAAACAAACCACAAAGATAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000099202.10
ENSMUST00000167058.8
ENSMUST00000171791.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS GCA 72 bp TTCTGCACCGGTTCTCAGTGGCGATACTTTCTGTTGTaGAGAAGTGTTTGGATAAGAAGTGTAATTCATCTG +
Preference number: 6 (lower is better)
Translates to: FCTGSQWRYFLL*RSVWIRSVIHL
Trigger: CAGATGAATTACACTTCTTATCCAAACACTTCTGCACAACAGAAAGTATCGCCACTGAGAACCGGTGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099202.10
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CCA 72 bp GCCATTTCTTCTAAAGGGTCCTTATTGAGTCCCAGCTaGCTGATGATATACCTAGGGATGTCAGTTTTGATT +
Preference number: 6 (lower is better)
Translates to: AISSKGSLLSPS*LMIYLGMSVLI
Trigger: AATCAAAACTGACATCCCTAGGTATATCATCAGCCAGCTGGGACTCAATAAGGACCCTTTAGAAGAAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp CTGAGTTTGCACCTGTTGCTTTCAGTATCTGAAGAGTaGGAGGTCGATAACTGTTGCATTTCAGAGTATTCG +
Preference number: 6 (lower is better)
Translates to: LSLHLLLSVSEE*EVDNCCISEYS
Trigger: CGAATACTCTGAAATGCAACAGTTATCGACCTCCAACTCTTCAGATACTGAAAGCAACAGGTGCAAACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000099202.10
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2
CDS CAA 72 bp TGTTTCTGCACCGGTTCTCAGTGGCGATACTTTCTGTaGTGCAGAAGTGTTTGGATAAGAAGTGTAATTCAT +
Preference number: 6 (lower is better)
Translates to: CFCTGSQWRYFL*CRSVWIRSVIH
Trigger: ATGAATTACACTTCTTATCCAAACACTTCTGCACAACAGAAAGTATCGCCACTGAGAACCGGTGCAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000099202.10
ENSMUST00000166336.9
ENSMUST00000166726.8
ENSMUST00000167058.8
ENSMUST00000167462.8
ENSMUST00000171791.8
ENSMUST00000172264.8
ENSMUST00000194446.7
ENSMUST00000239261.2