Pregenerated sensors for MAST2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003810Ensembl transcript IDs: ENSMUST00000003908.11, ENSMUST00000106484.8, ENSMUST00000106485.8, ENSMUST00000106486.8, ENSMUST00000123072.8, ENSMUST00000239177.2, ENSMUST00000239239.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGGGTCCCACGGCCTCGTGTCTCCAGGGCTGGGCAACACCGACTaGTTTGGCCAGGAGGCTCCTCATCCAGCTTCAGTTGCCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: EGSHGLVSPGLGNTD*FGQEAPHPASVASP Trigger: TGGAGAGGCAACTGAAGCTGGATGAGGAGCCTCCTGGCCAAAGCAGTCGGTGTTGCCCAGCCCTGGAGACACGAGGCCGTGGGACCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | GCTCGATCCTGCCGTAGGGTCCCAAGGGCCCGTGAAGGAGCAGGCTaGAGTACCCCCTTTCCTGGAAGTGGCCCTTTCCCGGATAGCACA | + |
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Preference number: 5 (lower is better) Translates to: ARSCRRVPRAREGAG*STPFPGSGPFPDST Trigger: TGTGCTATCCGGGAAAGGGCCACTTCCAGGAAAGGGGGTACTGCAGCCTGCTCCTTCACGGGCCCTTGGGACCCTACGGCAGGATCGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | GGCCGGGTTTCTGGGCTCAGGGGGTGGGCTCTGCATGGAATGTCCTaGCTCCTGTCGCCTGAGGAATCAGGCACTTCGGTGATGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: GRVSGLRGWALHGMS*LLSPEESGTSVMLR Trigger: CCTGAGCATCACCGAAGTGCCTGATTCCTCAGGCGACAGGAGGCAGGACATTCCATGCAGAGCCCACCCCCTGAGCCCAGAAACCCGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | TCCAGAGCAGGCTGGGCCGGGTTTCTGGGCTCAGGGGGTGGGCTCTaGATGGAATGTCCTGCCTCCTGTCGCCTGAGGAATCAGGCACTT | + |
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Preference number: 5 (lower is better) Translates to: SRAGWAGFLGSGGGL*MECPASCRLRNQAL Trigger: AAGTGCCTGATTCCTCAGGCGACAGGAGGCAGGACATTCCATGCAGAGCCCACCCCCTGAGCCCAGAAACCCGGCCCAGCCTGCTCTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | ACAGCTAGGTCGCTGATGGCTTTGGCTGTAGCTTCCTCAGCTAGCTaGGGGGTCCCACGGCCTCGTGTCTCCAGGGCTGGGCAACACCGA | + |
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Preference number: 5 (lower is better) Translates to: TARSLMALAVASSAS*GVPRPRVSRAGQHR Trigger: TCGGTGTTGCCCAGCCCTGGAGACACGAGGCCGTGGGACCCCTCAGCTAGCTGAGGAAGCTACAGCCAAAGCCATCAGCGACCTAGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | GGGCGAGTGGTGCGCTTCTCTATAGAGTCCCCAGAGAGCAGCCGGTaGCGGGCCCTACGCACAGCTAGGTCGCTGATGGCTTTGGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: GRVVRFSIESPESSR*RALRTARSLMALAV Trigger: TACAGCCAAAGCCATCAGCGACCTAGCTGTGCGTAGGGCCCGTCACCGGCTGCTCTCTGGGGACTCTATAGAGAAGCGCACCACTCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | CGCCGTGGTGAGCGGTATTGGCGTTGGAGCTTGGGTGCCAGACCGTaGAGAGAGCTGGGCCGTGTATGTCCAGAGCCAGCAGGAGAACTG | + |
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Preference number: 5 (lower is better) Translates to: RRGERYWRWSLGARP*RELGRVCPEPAGEL Trigger: CAGTTCTCCTGCTGGCTCTGGACATACACGGCCCAGCTCTCTTCACGGTCTGGCACCCAAGCTCCAACGCCAATACCGCTCACCACGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | TGCCTGCTGACTTGCGCCGTGGTGAGCGGTATTGGCGTTGGAGCTTaGGTGCCAGACCGTGAAGAGAGCTGGGCCGTGTATGTCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: CLLTCAVVSGIGVGA*VPDREESWAVYVQS Trigger: GCTCTGGACATACACGGCCCAGCTCTCTTCACGGTCTGGCACCCAAGCTCCAACGCCAATACCGCTCACCACGGCGCAAGTCAGCAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | GAGCCAGCAGGAGAACTGGGCACACTGGAGCTGGGAGAGCTGCTCTaGGAGGAATTCCCTCCTACTGAGTGCACAGCATCTGGGGCTACC | + |
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Preference number: 5 (lower is better) Translates to: EPAGELGTLELGELL*EEFPPTECTASGAT Trigger: GGTAGCCCCAGATGCTGTGCACTCAGTAGGAGGGAATTCCTCGCAGAGCAGCTCTCCCAGCTCCAGTGTGCCCAGTTCTCCTGCTGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003908.11 ENSMUST00000106485.8 |
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| CDS GCA 90 bp | GTCCAGAGCCAGCAGGAGAACTGGGCACACTGGAGCTGGGAGAGCTaGTCTGCGAGGAATTCCCTCCTACTGAGTGCACAGCATCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: VQSQQENWAHWSWES*SARNSLLLSAQHLG Trigger: CCCCAGATGCTGTGCACTCAGTAGGAGGGAATTCCTCGCAGAGCAGCTCTCCCAGCTCCAGTGTGCCCAGTTCTCCTGCTGGCTCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003908.11 ENSMUST00000106485.8 |
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| CDS GCA 90 bp | GTCCAGAGCCAGCAGGAGAACTGGGCACACTGGAGCTGGGAGAGCTaGTCTGCGAGGAATTCCCTCCTGAGTGCACAGCATCTGGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: VQSQQENWAHWSWES*SARNSLLSAQHLGL Trigger: TAGCCCCAGATGCTGTGCACTCAGGAGGGAATTCCTCGCAGAGCAGCTCTCCCAGCTCCAGTGTGCCCAGTTCTCCTGCTGGCTCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106484.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | AGCGGTATTGGCGTTGGAGCTTGGGTGCCAGACCGTGAAGAGAGCTaGGCCGTGTATGTCCAGAGCCAGCAGGAGAACTGGGCACACTGG | + |
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Preference number: 5 (lower is better) Translates to: SGIGVGAWVPDREES*AVYVQSQQENWAHW Trigger: CCAGTGTGCCCAGTTCTCCTGCTGGCTCTGGACATACACGGCCCAGCTCTCTTCACGGTCTGGCACCCAAGCTCCAACGCCAATACCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | TCAGACTCCCATGGCCAGTTCTGGCTGGGGACCTCAAGAAGCGGATaGGTCAGCCCAGGCACACTTGGTGGCTGTGGCTTCTCCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SDSHGQFWLGTSRSG*VSPGTLGGCGFSSS Trigger: TGAGGAGGAGAAGCCACAGCCACCAAGTGTGCCTGGGCTGACCCATCCGCTTCTTGAGGTCCCCAGCCAGAACTGGCCATGGGAGTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | TTCTTCTCAGCAGCTGCCAGTGCAGCCGCCAGCTTCTCAGCAGACTaGACCCTCTTAAGTAGGGGAGAGCGGGGTGGCTCTGCACTCTTG | + |
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Preference number: 5 (lower is better) Translates to: FFSAAASAAASFSAD*TLLSRGERGGSALL Trigger: CAAGAGTGCAGAGCCACCCCGCTCTCCCCTACTTAAGAGGGTGCAGTCTGCTGAGAAGCTGGCGGCTGCACTGGCAGCTGCTGAGAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | CTGGCTGGGGACCTCAAGAAGCGGATGGGTCAGCCCAGGCACACTTaGTGGCTGTGGCTTCTCCTCCTCAGGAGACAGGTTCTTCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LAGDLKKRMGQPRHT*WLWLLLLRRQVLQK Trigger: CTTCTGAAGAACCTGTCTCCTGAGGAGGAGAAGCCACAGCCACCAAGTGTGCCTGGGCTGACCCATCCGCTTCTTGAGGTCCCCAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | ACCCAGCTGCGATCTCGGCCCTTCAGTCCTGCCAAGCCGTCTGAGTaGTCTTCCTTTTCCTCACTGAGGCTGCGCTTGGTTGGAGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: TQLRSRPFSPAKPSE*SSFSSLRLRLVGGG Trigger: ACCACCTCCAACCAAGCGCAGCCTCAGTGAGGAAAAGGAAGATCACTCAGACGGCTTGGCAGGACTGAAGGGCCGAGATCGCAGCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | CCTTCAGTCCTGCCAAGCCGTCTGAGTGATCTTCCTTTTCCTCACTaGGGCTGCGCTTGGTTGGAGGTGGTGTCCGGCGTTCCTCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: PSVLPSRLSDLPFPH*GCAWLEVVSGVPQA Trigger: TGCTTGAGGAACGCCGGACACCACCTCCAACCAAGCGCAGCCTCAGTGAGGAAAAGGAAGATCACTCAGACGGCTTGGCAGGACTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | AATCACCCAGCTGCGATCTCGGCCCTTCAGTCCTGCCAAGCCGTCTaGGTGATCTTCCTTTTCCTCACTGAGGCTGCGCTTGGTTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: NHPAAISALQSCQAV*VIFLFLTEAALGWR Trigger: CCTCCAACCAAGCGCAGCCTCAGTGAGGAAAAGGAAGATCACTCAGACGGCTTGGCAGGACTGAAGGGCCGAGATCGCAGCTGGGTGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | GCTCAGGGGGTGGGCTCTGCATGGAATGTCCTGCCTCCTGTCGCCTaGGGAATCAGGCACTTCGGTGATGCTCAGGGATGGTTCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: AQGVGSAWNVLPPVA*GIRHFGDAQGWFFF Trigger: AAAGAAGAACCATCCCTGAGCATCACCGAAGTGCCTGATTCCTCAGGCGACAGGAGGCAGGACATTCCATGCAGAGCCCACCCCCTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | CAACACCGACTGCTTTGGCCAGGAGGCTCCTCATCCAGCTTCAGTTaGCTCTCCAACGGTCGTTCAGGAACAGGCCTAGATGACCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: QHRLLWPGGSSSSFS*LSNGRSGTGLDDPS Trigger: AGAGGGGTCATCTAGGCCTGTTCCTGAACGACCGTTGGAGAGGCAACTGAAGCTGGATGAGGAGCCTCCTGGCCAAAGCAGTCGGTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | CTAAGCTTCCTGAAGAGCAGAGGACTAAGTCCAGTAACCATATCCTaGTCCCTGCTGTCGTGCCCCAAAGGCCCGCTCCGCTCCTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: LSFLKSRGLSPVTIS*SLLSCPKGPLRSSS Trigger: ACTGGAGGAGCGGAGCGGGCCTTTGGGGCACGACAGCAGGGAGCAGGATATGGTTACTGGACTTAGTCCTCTGCTCTTCAGGAAGCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS CCA 90 bp | GTACCCCCTTTCCTGGAAGTGGCCCTTTCCCGGATAGCACACTTCTaGTTCCAACTACCTCCAGAGGGCTGGCTTCCCTGGGTGTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: VPPFLEVALSRIAHF*FQLPPEGWLPWVSV Trigger: AACTGACACCCAGGGAAGCCAGCCCTCTGGAGGTAGTTGGAACCAGAAGTGTGCTATCCGGGAAAGGGCCACTTCCAGGAAAGGGGGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | CCCTCTCCTGAACCTTTAGGGAGTAGATTGTGGCTTGCTTCTGGGTaGGGGGACAATCTTGGCTCCTGTGTGGCCTGGCTGTTCTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: PSPEPLGSRLWLASG*GDNLGSCVAWLFSG Trigger: GCCTGAGAACAGCCAGGCCACACAGGAGCCAAGATTGTCCCCCCACCCAGAAGCAAGCCACAATCTACTCCCTAAAGGTTCAGGAGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | GGTGCTACTAGTCTCCTCAGGGCAATGAGGCCCATCTGGGAGGCCTaGACACCGATGTCGCACTGTCATTGGAGGACTCGAATCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: GATSLLRAMRPIWEA*TPMSHCHWRTRITL Trigger: GAGAGTGATTCGAGTCCTCCAATGACAGTGCGACATCGGTGTTCAGGCCTCCCAGATGGGCCTCATTGCCCTGAGGAGACTAGTAGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | TCCTGTTGTTGCTTCCGAGGGGTGCTACTAGTCTCCTCAGGGCAATaGGGCCCATCTGGGAGGCCTGAACACCGATGTCGCACTGTCATT | + |
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Preference number: 5 (lower is better) Translates to: SCCCFRGVLLVSSGQ*GPSGRPEHRCRTVI Trigger: AATGACAGTGCGACATCGGTGTTCAGGCCTCCCAGATGGGCCTCATTGCCCTGAGGAGACTAGTAGCACCCCTCGGAAGCAACAACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | GACCTCAAGAAGCGGATGGGTCAGCCCAGGCACACTTGGTGGCTGTaGCTTCTCCTCCTCAGGAGACAGGTTCTTCAGAAGATTTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: DLKKRMGQPRHTWWL*LLLLRRQVLQKIWD Trigger: GTCCCAAATCTTCTGAAGAACCTGTCTCCTGAGGAGGAGAAGCCACAGCCACCAAGTGTGCCTGGGCTGACCCATCCGCTTCTTGAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | CAGCTTCAGTTGCCTCTCCAACGGTCGTTCAGGAACAGGCCTAGATaGCCCCTCTCCAGATGGGGGAATGAGGACCCATATACCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: QLQLPLQRSFRNRPR*PLSRWGNEDPYTFL Trigger: CAGGAAGGTATATGGGTCCTCATTCCCCCATCTGGAGAGGGGTCATCTAGGCCTGTTCCTGAACGACCGTTGGAGAGGCAACTGAAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | CAGATAACCGCTTCCGTAATATCTCAGGGGACCCAATCACCCAGCTaGGATCTCGGCCCTTCAGTCCTGCCAAGCCGTCTGAGTGATCTT | + |
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Preference number: 5 (lower is better) Translates to: QITASVISQGTQSPS*DLGPSVLPSRLSDL Trigger: AAGATCACTCAGACGGCTTGGCAGGACTGAAGGGCCGAGATCGCAGCTGGGTGATTGGGTCCCCTGAGATATTACGGAAGCGGTTATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | CTTTCTCCATTTGTTCACATTCAGACTCCCATGGCCAGTTCTGGCTaGGGACCTCAAGAAGCGGATGGGTCAGCCCAGGCACACTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LSPFVHIQTPMASSG*GPQEADGSAQAHLV Trigger: CACCAAGTGTGCCTGGGCTGACCCATCCGCTTCTTGAGGTCCCCAGCCAGAACTGGCCATGGGAGTCTGAATGTGAACAAATGGAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | TTGTGCCCAGTCTTTCTAGTGGATTCTGATGAAGCAGTTTGGAAGTaGGGTCTTGGGCATCTGGGGGAAGCGCGTCATCACCTTCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LCPVFLVDSDEAVWK*GLGHLGEARHHLRA Trigger: GGCCCGAAGGTGATGACGCGCTTCCCCCAGATGCCCAAGACCTCACTTCCAAACTGCTTCATCAGAATCCACTAGAAAGACTGGGCACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | ACCTGTCCCACACTGCTGTGTACACTGCTGGACAAAGGGAGCAGCTaGTTACCCGACAGAGAACTTGCCAGGCTTCCTCTCCGTAACTTA | + |
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Preference number: 5 (lower is better) Translates to: TCPTLLCTLLDKGSS*LPDRELARLPLRNL Trigger: TAAGTTACGGAGAGGAAGCCTGGCAAGTTCTCTGTCGGGTAAGCAGCTGCTCCCTTTGTCCAGCAGTGTACACAGCAGTGTGGGACAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS CCA 90 bp | CTTTCCCGGATAGCACACTTCTGGTTCCAACTACCTCCAGAGGGCTaGCTTCCCTGGGTGTCAGTTCCTTCTTTAGTTCACCATGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LSRIAHFWFQLPPEG*LPWVSVPSLVHHGA Trigger: TGCCCCATGGTGAACTAAAGAAGGAACTGACACCCAGGGAAGCCAGCCCTCTGGAGGTAGTTGGAACCAGAAGTGTGCTATCCGGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | GTGTCATCTTCTGAGGAGTCTACTTCCCGGATTGCTTCTTGTTTTTaGAGTGACTCACGGCGTTCAGCTCGATCCTGCCGTAGGGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: VSSSEESTSRIASCF*SDSRRSARSCRRVP Trigger: TGGGACCCTACGGCAGGATCGAGCTGAACGCCGTGAGTCACTGCAAAAACAAGAAGCAATCCGGGAAGTAGACTCCTCAGAAGATGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | ATAGCACACTTCTGGTTCCAACTACCTCCAGAGGGCTGGCTTCCCTaGGTGTCAGTTCCTTCTTTAGTTCACCATGGGGCAGGTCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: IAHFWFQLPPEGWLP*VSVPSLVHHGAGQD Trigger: GTCTTGACCTGCCCCATGGTGAACTAAAGAAGGAACTGACACCCAGGGAAGCCAGCCCTCTGGAGGTAGTTGGAACCAGAAGTGTGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | CCTCAACTGAATCATCTGTCTCTGGAGTATCTGGACTGTCATAGCTaGTCAACTGGGCCATTTCCTCCAAGGGATCCCGAGTTAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: PQLNHLSLEYLDCHS*STGPFPPRDPELGP Trigger: TGGGCCTAACTCGGGATCCCTTGGAGGAAATGGCCCAGTTGAGCAGCTATGACAGTCCAGATACTCCAGAGACAGATGATTCAGTTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | TCAGTTCCTTCTTTAGTTCACCATGGGGCAGGTCAAGACTATGTTTaGGGGAAGGTGCTAACTTCTTCTCAGCAGCTGCCAGTGCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: SVPSLVHHGAGQDYV*GKVLTSSQQLPVQP Trigger: CGGCTGCACTGGCAGCTGCTGAGAAGAAGTTAGCACCTTCCCGCAAACATAGTCTTGACCTGCCCCATGGTGAACTAAAGAAGGAACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | TACTTGTCCGACAACTCCACTGTAGTGTGCGGCTGGAACAAGGACTaGAGGGACTGCTGTGGGCTTGAGGGTTCAAGAAAAAGACAAGAG | + |
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Preference number: 5 (lower is better) Translates to: YLSDNSTVVCGWNKD*RDCCGLEGSRKRQE Trigger: CTCTTGTCTTTTTCTTGAACCCTCAAGCCCACAGCAGTCCCTGCAGTCCTTGTTCCAGCCGCACACTACAGTGGAGTTGTCGGACAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239177.2 |
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| CDS CCA 90 bp | CACCGATGTCGCACTGTCATTGGAGGACTCGAATCACTCTCTGTGTaGGATGACTCGGACACAGATAACCGCTTCCGTAATATCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: HRCRTVIGGLESLSV*DDSDTDNRFRNISG Trigger: CCCTGAGATATTACGGAAGCGGTTATCTGTGTCCGAGTCATCCCACACAGAGAGTGATTCGAGTCCTCCAATGACAGTGCGACATCGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | TCCTTCAAGCCAGCCGTAAGGGAAGGTGCAGACTGTCCAAGGGATTaGTTTCTCATTCGAACCAGGTTTGATGCTTCTCCTGTAGACTGC | + |
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Preference number: 5 (lower is better) Translates to: SFKPAVREGADCPRD*FLIRTRFDASPVDC Trigger: GCAGTCTACAGGAGAAGCATCAAACCTGGTTCGAATGAGAAACCAATCCCTTGGACAGTCTGCACCTTCCCTTACGGCTGGCTTGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS TCA 90 bp | AGGTGCAGACTGTCCAAGGGATTGGTTTCTCATTCGAACCAGGTTTaGTGCTTCTCCTGTAGACTGCCAAGTTACCTGTCCCACACTGCT | + |
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Preference number: 5 (lower is better) Translates to: RCRLSKGLVSHSNQV*CFSCRLPSYLSHTA Trigger: AGCAGTGTGGGACAGGTAACTTGGCAGTCTACAGGAGAAGCATCAAACCTGGTTCGAATGAGAAACCAATCCCTTGGACAGTCTGCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS GCA 90 bp | TTTTCCGGAATAGGGAGCTTCTTTTTCGGCTTTCTTGCCCATCCTTaGCTTTGCTCCGTTTGCTCCTTCGGGCCATCTTGGCTTTATAGC | + |
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Preference number: 5 (lower is better) Translates to: FSGIGSFFFGFLAHP*LCSVCSFGPSWLYS Trigger: GCTATAAAGCCAAGATGGCCCGAAGGAGCAAACGGAGCAAAGGCAAGGATGGGCAAGAAAGCCGAAAAAGAAGCTCCCTATTCCGGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | TGCTTTGTGATTTTCCGGAATAGGGAGCTTCTTTTTCGGCTTTCTTaGCCATCCTTGCCTTTGCTCCGTTTGCTCCTTCGGGCCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: CFVIFRNRELLFRLS*PSLPLLRLLLRAIL Trigger: CAAGATGGCCCGAAGGAGCAAACGGAGCAAAGGCAAGGATGGGCAAGAAAGCCGAAAAAGAAGCTCCCTATTCCGGAAAATCACAAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | TGGCTGTGGCTTCTCCTCCTCAGGAGACAGGTTCTTCAGAAGATTTaGGACCGTGGTATTCGTATCTTGGGAGTTAGCTGGTTCACCTTT | + |
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Preference number: 5 (lower is better) Translates to: WLWLLLLRRQVLQKI*DRGIRILGVSWFTF Trigger: AAAGGTGAACCAGCTAACTCCCAAGATACGAATACCACGGTCCCAAATCTTCTGAAGAACCTGTCTCCTGAGGAGGAGAAGCCACAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | GATTGGTTTCTCATTCGAACCAGGTTTGATGCTTCTCCTGTAGACTaGCAAGTTACCTGTCCCACACTGCTGTGTACACTGCTGGACAAA | + |
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Preference number: 5 (lower is better) Translates to: DWFLIRTRFDASPVD*QVTCPTLLCTLLDK Trigger: TTTGTCCAGCAGTGTACACAGCAGTGTGGGACAGGTAACTTGGCAGTCTACAGGAGAAGCATCAAACCTGGTTCGAATGAGAAACCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS TCA 90 bp | GACAGAGAACTTGCCAGGCTTCCTCTCCGTAACTTACAGTCATCCTaGCTAAGTTGTCGCTGGAGTTTAACTTTTCCAGTGGGTGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: DRELARLPLRNLQSS*LSCRWSLTFPVGAN Trigger: ATTTGCACCCACTGGAAAAGTTAAACTCCAGCGACAACTTAGTCAGGATGACTGTAAGTTACGGAGAGGAAGCCTGGCAAGTTCTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS CCA 90 bp | CTTCAGAAGATTTGGGACCGTGGTATTCGTATCTTGGGAGTTAGCTaGTTCACCTTTCCTTGTTATGGTCTTGTTCGTGGATGCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LQKIWDRGIRILGVS*FTFPCYGLVRGCSV Trigger: GACAGAGCATCCACGAACAAGACCATAACAAGGAAAGGTGAACCAGCTAACTCCCAAGATACGAATACCACGGTCCCAAATCTTCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 90 bp | GGAGACAGGTTCTTCAGAAGATTTGGGACCGTGGTATTCGTATCTTaGGAGTTAGCTGGTTCACCTTTCCTTGTTATGGTCTTGTTCGTG | + |
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Preference number: 5 (lower is better) Translates to: GDRFFRRFGTVVFVS*ELAGSPFLVMVLFV Trigger: CACGAACAAGACCATAACAAGGAAAGGTGAACCAGCTAACTCCCAAGATACGAATACCACGGTCCCAAATCTTCTGAAGAACCTGTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 90 bp | TTGCAGAAGCTTTTCCAAATTCTCTTGAAGTTCATAGAAATAGTGTaGCGTAATGAGGCCACTCCGAGATTTATCCAGGCAGTCTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: LQKLFQILLKFIEIV*RNEATPRFIQAVSG Trigger: GCCCGAGACTGCCTGGATAAATCTCGGAGTGGCCTCATTACGTCACACTATTTCTATGAACTTCAAGAGAATTTGGAAAAGCTTCTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 90 bp | GTCATCCTGACTAAGTTGTCGCTGGAGTTTAACTTTTCCAGTGGGTaGAAATATGTCAGGATTACTAAGCTTCCTGAAGAGCAGAGGACT | + |
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Preference number: 5 (lower is better) Translates to: VILTKLSLEFNFSSG*KYVRITKLPEEQRT Trigger: AGTCCTCTGCTCTTCAGGAAGCTTAGTAATCCTGACATATTTGCACCCACTGGAAAAGTTAAACTCCAGCGACAACTTAGTCAGGATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS GCA 72 bp | TGCCGTAGGGTCCCAAGGGCCCGTGAAGGAGCAGGCTaGAGTACCCCCTTTCCTGGAAGTGGCCCTTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: CRRVPRAREGAG*STPFPGSGPFP Trigger: CGGGAAAGGGCCACTTCCAGGAAAGGGGGTACTGCAGCCTGCTCCTTCACGGGCCCTTGGGACCCTACGGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | GGCTGGGCCGGGTTTCTGGGCTCAGGGGGTGGGCTCTaGATGGAATGTCCTGCCTCCTGTCGCCTGAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: GWAGFLGSGGGL*MECPASCRLRN Trigger: ATTCCTCAGGCGACAGGAGGCAGGACATTCCATGCAGAGCCCACCCCCTGAGCCCAGAAACCCGGCCCAGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 90 bp | GGTCCCACGGCCTCGTGTCTCCAGGGCTGGGCAACACCGACTGCTTaGGCCAGGAGGCTCCTCATCCAGCTTCAGTTGCCTCTCCAACGG | + |
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Preference number: 6 (lower is better) Translates to: GPTASCLQGWATPTA*ARRLLIQLQLPLQR Trigger: CCGTTGGAGAGGCAACTGAAGCTGGATGAGGAGCCTCCTGGCCAAAGCAGTCGGTGTTGCCCAGCCCTGGAGACACGAGGCCGTGGGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | TCGCTGATGGCTTTGGCTGTAGCTTCCTCAGCTAGCTaGGGGGTCCCACGGCCTCGTGTCTCCAGGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SLMALAVASSAS*GVPRPRVSRAG Trigger: CCCAGCCCTGGAGACACGAGGCCGTGGGACCCCTCAGCTAGCTGAGGAAGCTACAGCCAAAGCCATCAGCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | GTGCGCTTCTCTATAGAGTCCCCAGAGAGCAGCCGGTaGCGGGCCCTACGCACAGCTAGGTCGCTGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: VRFSIESPESSR*RALRTARSLMA Trigger: AGCCATCAGCGACCTAGCTGTGCGTAGGGCCCGTCACCGGCTGCTCTCTGGGGACTCTATAGAGAAGCGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | GGAGCTGGGAGAGCTGCTCTGCGAGGAATTCCCTCCTaGGTGCACAGCATCTGGGGCTACCCGGTATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GAGRAALRGIPS*VHSIWGYPVSL Trigger: CAGGGATACCGGGTAGCCCCAGATGCTGTGCACTCAGGAGGGAATTCCTCGCAGAGCAGCTCTCCCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106484.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | CACGGCCTCGTGTCTCCAGGGCTGGGCAACACCGACTaGTTTGGCCAGGAGGCTCCTCATCCAGCTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: HGLVSPGLGNTD*FGQEAPHPASV Trigger: AACTGAAGCTGGATGAGGAGCCTCCTGGCCAAAGCAGTCGGTGTTGCCCAGCCCTGGAGACACGAGGCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | CTGGGACAAAGTGCAGTTAGTGCCTGTGTGTGGAGGTaGTGGGCCTTCCAGCAGCCTTCAGAGGGGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LGQSAVSACVWR*WAFQQPSEGVG Trigger: CCCCACCCCCTCTGAAGGCTGCTGGAAGGCCCAGCACCTCCACACACAGGCACTAACTGCACTTTGTCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | TCTGGGCTCAGGGGGTGGGCTCTGCATGGAATGTCCTaGCTCCTGTCGCCTGAGGAATCAGGCACTTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SGLRGWALHGMS*LLSPEESGTSV Trigger: CACCGAAGTGCCTGATTCCTCAGGCGACAGGAGGCAGGACATTCCATGCAGAGCCCACCCCCTGAGCCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | GGCGTTGGAGCTTGGGTGCCAGACCGTGAAGAGAGCTaGGCCGTGTATGTCCAGAGCCAGCAGGAGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: GVGAWVPDREES*AVYVQSQQENW Trigger: CCAGTTCTCCTGCTGGCTCTGGACATACACGGCCCAGCTCTCTTCACGGTCTGGCACCCAAGCTCCAACGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | TGCTTCCGAGGGGTGCTACTAGTCTCCTCAGGGCAATaGGGCCCATCTGGGAGGCCTGAACACCGATGTCGC | + |
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Preference number: 6 (lower is better) Translates to: CFRGVLLVSSGQ*GPSGRPEHRCR Trigger: GCGACATCGGTGTTCAGGCCTCCCAGATGGGCCTCATTGCCCTGAGGAGACTAGTAGCACCCCTCGGAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | GCTGGGAGAGCTGCTCTGCGAGGAATTCCCTCCTACTaGGTGCACAGCATCTGGGGCTACCCGGTATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: AGRAALRGIPSY*VHSIWGYPVSL Trigger: CAGGGATACCGGGTAGCCCCAGATGCTGTGCACTCAGTAGGAGGGAATTCCTCGCAGAGCAGCTCTCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003908.11 ENSMUST00000106485.8 |
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| CDS TCA 72 bp | GAGCGGTATTGGCGTTGGAGCTTGGGTGCCAGACCGTaGAGAGAGCTGGGCCGTGTATGTCCAGAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ERYWRWSLGARP*RELGRVCPEPA Trigger: TGCTGGCTCTGGACATACACGGCCCAGCTCTCTTCACGGTCTGGCACCCAAGCTCCAACGCCAATACCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | CTAAGTCCAGTAACCATATCCTGCTCCCTGCTGTCGTaGCCCAAAGGCCCGCTCCGCTCCTCCAGTAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSPVTISCSLLS*PKGPLRSSSSC Trigger: GCAGCTACTGGAGGAGCGGAGCGGGCCTTTGGGGCACGACAGCAGGGAGCAGGATATGGTTACTGGACTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS CCA 72 bp | ACTTGCGCCGTGGTGAGCGGTATTGGCGTTGGAGCTTaGGTGCCAGACCGTGAAGAGAGCTGGGCCGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: TCAVVSGIGVGA*VPDREESWAVY Trigger: ATACACGGCCCAGCTCTCTTCACGGTCTGGCACCCAAGCTCCAACGCCAATACCGCTCACCACGGCGCAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | GTGGGCTCTGCATGGAATGTCCTGCCTCCTGTCGCCTaGGGAATCAGGCACTTCGGTGATGCTCAGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: VGSAWNVLPPVA*GIRHFGDAQGW Trigger: CCATCCCTGAGCATCACCGAAGTGCCTGATTCCTCAGGCGACAGGAGGCAGGACATTCCATGCAGAGCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | GCTTCCGTAATATCTCAGGGGACCCAATCACCCAGCTaGGATCTCGGCCCTTCAGTCCTGCCAAGCCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: ASVISQGTQSPS*DLGPSVLPSRL Trigger: CAGACGGCTTGGCAGGACTGAAGGGCCGAGATCGCAGCTGGGTGATTGGGTCCCCTGAGATATTACGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | CTGAAGAGCAGAGGACTAAGTCCAGTAACCATATCCTaGTCCCTGCTGTCGTGCCCCAAAGGCCCGCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LKSRGLSPVTIS*SLLSCPKGPLR Trigger: GCGGAGCGGGCCTTTGGGGCACGACAGCAGGGAGCAGGATATGGTTACTGGACTTAGTCCTCTGCTCTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS TCA 72 bp | CTGCCAAGCCGTCTGAGTGATCTTCCTTTTCCTCACTaGGGCTGCGCTTGGTTGGAGGTGGTGTCCGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: LPSRLSDLPFPH*GCAWLEVVSGV Trigger: AACGCCGGACACCACCTCCAACCAAGCGCAGCCTCAGTGAGGAAAAGGAAGATCACTCAGACGGCTTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | GCTGCGATCTCGGCCCTTCAGTCCTGCCAAGCCGTCTaGGTGATCTTCCTTTTCCTCACTGAGGCTGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: AAISALQSCQAV*VIFLFLTEAAL Trigger: AAGCGCAGCCTCAGTGAGGAAAAGGAAGATCACTCAGACGGCTTGGCAGGACTGAAGGGCCGAGATCGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | AGTCTCCTCAGGGCAATGAGGCCCATCTGGGAGGCCTaGACACCGATGTCGCACTGTCATTGGAGGACTCGA | + |
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Preference number: 6 (lower is better) Translates to: SLLRAMRPIWEA*TPMSHCHWRTR Trigger: TCGAGTCCTCCAATGACAGTGCGACATCGGTGTTCAGGCCTCCCAGATGGGCCTCATTGCCCTGAGGAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | TTCCTTTTCCTCACTGAGGCTGCGCTTGGTTGGAGGTaGTGTCCGGCGTTCCTCAAGCAGGGAAAGCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: FLFLTEAALGWR*CPAFLKQGKPF Trigger: GAACGGCTTTCCCTGCTTGAGGAACGCCGGACACCACCTCCAACCAAGCGCAGCCTCAGTGAGGAAAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | GTGGATGATGATGGGAGGCCTCAAGCTGCCAAGGGCTaGCAAGAAGTCCCTGCTTGGAGAAGAGTCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VDDDGRPQAAKG*QEVPAWRRVPG Trigger: TCCAGGGACTCTTCTCCAAGCAGGGACTTCTTGCCAGCCCTTGGCAGCTTGAGGCCTCCCATCATCATCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | TTCCTGGAAGTGGCCCTTTCCCGGATAGCACACTTCTaGTTCCAACTACCTCCAGAGGGCTGGCTTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLEVALSRIAHF*FQLPPEGWLPW Trigger: CCAGGGAAGCCAGCCCTCTGGAGGTAGTTGGAACCAGAAGTGTGCTATCCGGGAAAGGGCCACTTCCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | CGATCTCGGCCCTTCAGTCCTGCCAAGCCGTCTGAGTaGTCTTCCTTTTCCTCACTGAGGCTGCGCTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RSRPFSPAKPSE*SSFSSLRLRLV Trigger: AACCAAGCGCAGCCTCAGTGAGGAAAAGGAAGATCACTCAGACGGCTTGGCAGGACTGAAGGGCCGAGATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | CTGATGAAGCAGTTTGGAAGTGAGGTCTTGGGCATCTaGGGGAAGCGCGTCATCACCTTCGGGCCACACGAT | + |
|
Preference number: 6 (lower is better) Translates to: LMKQFGSEVLGI*GKRVITFGPHD Trigger: ATCGTGTGGCCCGAAGGTGATGACGCGCTTCCCCCAGATGCCCAAGACCTCACTTCCAAACTGCTTCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | GTGATCTTCCTTTTCCTCACTGAGGCTGCGCTTGGTTaGAGGTGGTGTCCGGCGTTCCTCAAGCAGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VIFLFLTEAALG*RWCPAFLKQGK Trigger: CTTTCCCTGCTTGAGGAACGCCGGACACCACCTCCAACCAAGCGCAGCCTCAGTGAGGAAAAGGAAGATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | TGTGGGGACATAGGGCTGGCCAATGGTGAGCAGGCATaGTGTTCTGAAGGAATGAGGAGGGAAAGGGCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: CGDIGLANGEQA*CSEGMRRERAV Trigger: TACGGCCCTTTCCCTCCTCATTCCTTCAGAACACCATGCCTGCTCACCATTGGCCAGCCCTATGTCCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | GGTTACTTGTCCGACAACTCCACTGTAGTGTGCGGCTaGAACAAGGACTGCAGGGACTGCTGTGGGCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GYLSDNSTVVCG*NKDCRDCCGLE Trigger: CTCAAGCCCACAGCAGTCCCTGCAGTCCTTGTTCCAGCCGCACACTACAGTGGAGTTGTCGGACAAGTAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239177.2 |
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| CDS CAA 90 bp | AATGAGGCCCATCTGGGAGGCCTGAACACCGATGTCGCACTGTCATaGGAGGACTCGAATCACTCTCTGTGTGGGATGACTCGGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: NEAHLGGLNTDVALS*EDSNHSLCGMTRTQ Trigger: CTGTGTCCGAGTCATCCCACACAGAGAGTGATTCGAGTCCTCCAATGACAGTGCGACATCGGTGTTCAGGCCTCCCAGATGGGCCTCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 90 bp | GCTGGCAAGAAGTCCCTGCTTGGAGAAGAGTCCCTGGATGATGGATaGGATGACTGGGAATGTGGGGACATAGGGCTGGCCAATGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGKKSLLGEESLDDG*DDWECGDIGLANGE Trigger: CTCACCATTGGCCAGCCCTATGTCCCCACATTCCCAGTCATCCAATCCATCATCCAGGGACTCTTCTCCAAGCAGGGACTTCTTGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | TTGCCTCTCCAACGGTCGTTCAGGAACAGGCCTAGATaGCCCCTCTCCAGATGGGGGAATGAGGACCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: LPLQRSFRNRPR*PLSRWGNEDPY Trigger: ATATGGGTCCTCATTCCCCCATCTGGAGAGGGGTCATCTAGGCCTGTTCCTGAACGACCGTTGGAGAGGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | ACACTGCTGTGTACACTGCTGGACAAAGGGAGCAGCTaGTTACCCGACAGAGAACTTGCCAGGCTTCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TLLCTLLDKGSS*LPDRELARLPL Trigger: GAGAGGAAGCCTGGCAAGTTCTCTGTCGGGTAAGCAGCTGCTCCCTTTGTCCAGCAGTGTACACAGCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS CCA 72 bp | GCCAAGTTACCTGTCCCACACTGCTGTGTACACTGCTaGACAAAGGGAGCAGCTGCTTACCCGACAGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AKLPVPHCCVHC*TKGAAAYPTEN Trigger: GTTCTCTGTCGGGTAAGCAGCTGCTCCCTTTGTCCAGCAGTGTACACAGCAGTGTGGGACAGGTAACTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS CCA 72 bp | TCCATTTGTTCACATTCAGACTCCCATGGCCAGTTCTaGCTGGGGACCTCAAGAAGCGGATGGGTCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SICSHSDSHGQF*LGTSRSGWVSP Trigger: TGGGCTGACCCATCCGCTTCTTGAGGTCCCCAGCCAGAACTGGCCATGGGAGTCTGAATGTGAACAAATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | GATGGGGGAATGAGGACCCATATACCTTCCTGTTGTTaGTTCCGAGGGGTGCTACTAGTCTCCTCAGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: DGGMRTHIPSCC*FRGVLLVSSGQ Trigger: TTGCCCTGAGGAGACTAGTAGCACCCCTCGGAAGCAACAACAGGAAGGTATATGGGTCCTCATTCCCCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | GTGGCCCCTGTCACTAGACCTGAGAGTACAGGGCCCTaGTTCTTTAGATCCCTGTGCAAGAAAGTGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VAPVTRPESTGP*FFRSLCKKVSS Trigger: AGAGGACACTTTCTTGCACAGGGATCTAAAGAAGCAGGGCCCTGTACTCTCAGGTCTAGTGACAGGGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | GACAACTCCACTGTAGTGTGCGGCTGGAACAAGGACTaGAGGGACTGCTGTGGGCTTGAGGGTTCAAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: DNSTVVCGWNKD*RDCCGLEGSRK Trigger: TTTTCTTGAACCCTCAAGCCCACAGCAGTCCCTGCAGTCCTTGTTCCAGCCGCACACTACAGTGGAGTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239177.2 |
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| CDS CAA 72 bp | CATCTGGGAGGCCTGAACACCGATGTCGCACTGTCATaGGAGGACTCGAATCACTCTCTGTGTGGGATGACT | + |
|
Preference number: 6 (lower is better) Translates to: HLGGLNTDVALS*EDSNHSLCGMT Trigger: AGTCATCCCACACAGAGAGTGATTCGAGTCCTCCAATGACAGTGCGACATCGGTGTTCAGGCCTCCCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 72 bp | TCCAGATGGGGGAATGAGGACCCATATACCTTCCTGTaGTTGCTTCCGAGGGGTGCTACTAGTCTCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRWGNEDPYTFL*LLPRGATSLLR Trigger: CCTGAGGAGACTAGTAGCACCCCTCGGAAGCAACAACAGGAAGGTATATGGGTCCTCATTCCCCCATCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | CGGCTGGAACAAGGACTGCAGGGACTGCTGTGGGCTTaGGGGTTCAAGAAAAAGACAAGAGGAGAAGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLEQGLQGLLWA*GFKKKTRGEVD Trigger: GTCTACTTCTCCTCTTGTCTTTTTCTTGAACCCTCAAGCCCACAGCAGTCCCTGCAGTCCTTGTTCCAGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239177.2 |
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| CDS GCA 72 bp | TTCGGCTTTCTTGCCCATCCTTGCCTTTGCTCCGTTTaGTCCTTCGGGCCATCTTGGCTTTATAGCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FGFLAHPCLCSV*SFGPSWLYSCL Trigger: AAGGCAGCTATAAAGCCAAGATGGCCCGAAGGAGCAAACGGAGCAAAGGCAAGGATGGGCAAGAAAGCCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | TCTGAGGAGTCTACTTCCCGGATTGCTTCTTGTTTTTaGAGTGACTCACGGCGTTCAGCTCGATCCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SEESTSRIASCF*SDSRRSARSCR Trigger: ACGGCAGGATCGAGCTGAACGCCGTGAGTCACTGCAAAAACAAGAAGCAATCCGGGAAGTAGACTCCTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | ACTGTAGTGTGCGGCTGGAACAAGGACTGCAGGGACTaGTGTGGGCTTGAGGGTTCAAGAAAAAGACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TVVCGWNKDCRD*CGLEGSRKRQE Trigger: CTCTTGTCTTTTTCTTGAACCCTCAAGCCCACAGCAGTCCCTGCAGTCCTTGTTCCAGCCGCACACTACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239177.2 |
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| CDS CAA 72 bp | TGGACAAAGGGAGCAGCTGCTTACCCGACAGAGAACTaGCCAGGCTTCCTCTCCGTAACTTACAGTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: WTKGAAAYPTEN*PGFLSVTYSHP Trigger: AGGATGACTGTAAGTTACGGAGAGGAAGCCTGGCAAGTTCTCTGTCGGGTAAGCAGCTGCTCCCTTTGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS CAA 72 bp | AGGGAAAGGGCCGTAGCTGAGGCTGACTTGATTACTTaGTTGACAGGGCGAGTGGTGCGCTTCTCTATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RERAVAEADLIT*LTGRVVRFSIE Trigger: CTCTATAGAGAAGCGCACCACTCGCCCTGTCAACAAAGTAATCAAGTCAGCCTCAGCTACGGCCCTTTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 90 bp | GTCAGTTCCTTCTTTAGTTCACCATGGGGCAGGTCAAGACTATGTTaGCGGGAAGGTGCTAACTTCTTCTCAGCAGCTGCCAGTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSSFFSSPWGRSRLC*REGANFFSAAASAA Trigger: GGCTGCACTGGCAGCTGCTGAGAAGAAGTTAGCACCTTCCCGCAAACATAGTCTTGACCTGCCCCATGGTGAACTAAAGAAGGAACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 90 bp | ATCAGGCACTTCGGTGATGCTCAGGGATGGTTCTTCTTTCTCCATTaGTTCACATTCAGACTCCCATGGCCAGTTCTGGCTGGGGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: IRHFGDAQGWFFFLH*FTFRLPWPVLAGDL Trigger: GAGGTCCCCAGCCAGAACTGGCCATGGGAGTCTGAATGTGAACAAATGGAGAAAGAAGAACCATCCCTGAGCATCACCGAAGTGCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 90 bp | CAGGCTCCTCATCAGTGTCATCTTCTGAGGAGTCTACTTCCCGGATaGCTTCTTGTTTTTGCAGTGACTCACGGCGTTCAGCTCGATCCT | + |
|
Preference number: 6 (lower is better) Translates to: QAPHQCHLLRSLLPG*LLVFAVTHGVQLDP Trigger: AGGATCGAGCTGAACGCCGTGAGTCACTGCAAAAACAAGAAGCAATCCGGGAAGTAGACTCCTCAGAAGATGACACTGATGAGGAGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | AATCATCTGTCTCTGGAGTATCTGGACTGTCATAGCTaGTCAACTGGGCCATTTCCTCCAAGGGATCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: NHLSLEYLDCHS*STGPFPPRDPE Trigger: CTCGGGATCCCTTGGAGGAAATGGCCCAGTTGAGCAGCTATGACAGTCCAGATACTCCAGAGACAGATGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | CCAGCCGTAAGGGAAGGTGCAGACTGTCCAAGGGATTaGTTTCTCATTCGAACCAGGTTTGATGCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PAVREGADCPRD*FLIRTRFDASP Trigger: AGGAGAAGCATCAAACCTGGTTCGAATGAGAAACCAATCCCTTGGACAGTCTGCACCTTCCCTTACGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS CCA 72 bp | CGCACTGTCATTGGAGGACTCGAATCACTCTCTGTGTaGGATGACTCGGACACAGATAACCGCTTCCGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: RTVIGGLESLSV*DDSDTDNRFRN Trigger: ATTACGGAAGCGGTTATCTGTGTCCGAGTCATCCCACACAGAGAGTGATTCGAGTCCTCCAATGACAGTGCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | ATAGCACACTTCTGGTTCCAACTACCTCCAGAGGGCTaGCTTCCCTGGGTGTCAGTTCCTTCTTTAGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: IAHFWFQLPPEG*LPWVSVPSLVH Trigger: GTGAACTAAAGAAGGAACTGACACCCAGGGAAGCCAGCCCTCTGGAGGTAGTTGGAACCAGAAGTGTGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 72 bp | AATAGGGAGCTTCTTTTTCGGCTTTCTTGCCCATCCTaGCCTTTGCTCCGTTTGCTCCTTCGGGCCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NRELLFRLSCPS*PLLRLLLRAIL Trigger: CAAGATGGCCCGAAGGAGCAAACGGAGCAAAGGCAAGGATGGGCAAGAAAGCCGAAAAAGAAGCTCCCTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 72 bp | ATGTGCTGGAGGTTACAATCAAGCTCTTGCGGTTACTaGTCCGACAACTCCACTGTAGTGTGCGGCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: MCWRLQSSSCGY*SDNSTVVCGWN Trigger: GTTCCAGCCGCACACTACAGTGGAGTTGTCGGACAAGTAACCGCAAGAGCTTGATTGTAACCTCCAGCACAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239177.2 |
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| CDS CAA 72 bp | ATGTGCTGGAGGTTACAATCAAGCTCTTGCGGTTACTaGTCCGACAATGAATCCGTAGGCTCGGTGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: MCWRLQSSSCGY*SDNESVGSVLP Trigger: TGGGAGCACCGAGCCTACGGATTCATTGTCGGACAAGTAACCGCAAGAGCTTGATTGTAACCTCCAGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239239.2 |
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| CDS GCA 72 bp | CTCATTCGAACCAGGTTTGATGCTTCTCCTGTAGACTaGCAAGTTACCTGTCCCACACTGCTGTGTACACTG | + |
|
Preference number: 6 (lower is better) Translates to: LIRTRFDASPVD*QVTCPTLLCTL Trigger: CAGTGTACACAGCAGTGTGGGACAGGTAACTTGGCAGTCTACAGGAGAAGCATCAAACCTGGTTCGAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS GCA 72 bp | TCTTTAGTTCACCATGGGGCAGGTCAAGACTATGTTTaGGGGAAGGTGCTAACTTCTTCTCAGCAGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLVHHGAGQDYV*GKVLTSSQQLP Trigger: TGGCAGCTGCTGAGAAGAAGTTAGCACCTTCCCGCAAACATAGTCTTGACCTGCCCCATGGTGAACTAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | ATGATTCATCATTATTATTTCACTGTCAAAGGAAACTaGGGACCGTCCAGGACTGAGGCTGCGGGAACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MIHHYYFTVKGN*GPSRTEAAGTG Trigger: CCCCGTTCCCGCAGCCTCAGTCCTGGACGGTCCCCAGTTTCCTTTGACAGTGAAATAATAATGATGAATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000123072.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 72 bp | TTCTTTAGTTCACCATGGGGCAGGTCAAGACTATGTTaGCGGGAAGGTGCTAACTTCTTCTCAGCAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FFSSPWGRSRLC*REGANFFSAAA Trigger: GGCAGCTGCTGAGAAGAAGTTAGCACCTTCCCGCAAACATAGTCTTGACCTGCCCCATGGTGAACTAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | CTGTCCAAGGGATTGGTTTCTCATTCGAACCAGGTTTaGTGCTTCTCCTGTAGACTGCCAAGTTACCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSKGLVSHSNQV*CFSCRLPSYLS Trigger: GGACAGGTAACTTGGCAGTCTACAGGAGAAGCATCAAACCTGGTTCGAATGAGAAACCAATCCCTTGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 |
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| CDS CAA 72 bp | CATCAGTGTCATCTTCTGAGGAGTCTACTTCCCGGATaGCTTCTTGTTTTTGCAGTGACTCACGGCGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HQCHLLRSLLPG*LLVFAVTHGVQ Trigger: CTGAACGCCGTGAGTCACTGCAAAAACAAGAAGCAATCCGGGAAGTAGACTCCTCAGAAGATGACACTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 90 bp | AGGAGACAGGTTCTTCAGAAGATTTGGGACCGTGGTATTCGTATCTaGGGAGTTAGCTGGTTCACCTTTCCTTGTTATGGTCTTGTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: RRQVLQKIWDRGIRI*GVSWFTFPCYGLVR Trigger: ACGAACAAGACCATAACAAGGAAAGGTGAACCAGCTAACTCCCAAGATACGAATACCACGGTCCCAAATCTTCTGAAGAACCTGTCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS TCA 72 bp | TGCTTGTCTAGGAACTCCCGGGCATCCTTTTCAATATaGCCCTCATACAAGTTGGTTGTCAAACTCATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CLSRNSRASFSI*PSYKLVVKLMR Trigger: CCTCATGAGTTTGACAACCAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGAGTTCCTAGACAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS GCA 72 bp | TGGTTCACCTTTCCTTGTTATGGTCTTGTTCGTGGATaGTCTGTCTGGACCCTCAATAAGGAATTTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WFTFPCYGLVRG*SVWTLNKEFPG Trigger: TCCTGGAAATTCCTTATTGAGGGTCCAGACAGAGCATCCACGAACAAGACCATAACAAGGAAAGGTGAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | ATTTGGGACCGTGGTATTCGTATCTTGGGAGTTAGCTaGTTCACCTTTCCTTGTTATGGTCTTGTTCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: IWDRGIRILGVS*FTFPCYGLVRG Trigger: TCCACGAACAAGACCATAACAAGGAAAGGTGAACCAGCTAACTCCCAAGATACGAATACCACGGTCCCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 90 bp | ACTTTGATTGACGTGTTCTCCAAGGGAGTTGTTGAAATTGATACCTaGTTTCCACTCTTCAGAACCAGCTCCACCACTTCTGTGTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: TLIDVFSKGVVEIDT*FPLFRTSSTTSVWT Trigger: AGTCCACACAGAAGTGGTGGAGCTGGTTCTGAAGAGTGGAAACAAGGTATCAATTTCAACAACTCCCTTGGAGAACACGTCAATCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | GCGAAAGTCAGTATGTCGCGTTCCACAAATGCTTGCTaGATCTGGTTCCGTAGGATTAGGTTTTGCTTATTA | + |
|
Preference number: 6 (lower is better) Translates to: AKVSMSRSTNAC*IWFRRIRFCLL Trigger: TAATAAGCAAAACCTAATCCTACGGAACCAGATCCAGCAAGCATTTGTGGAACGCGACATACTGACTTTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CCA 72 bp | TTCTTCAGAAGATTTGGGACCGTGGTATTCGTATCTTaGGAGTTAGCTGGTTCACCTTTCCTTGTTATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FFRRFGTVVFVS*ELAGSPFLVMV Trigger: GACCATAACAAGGAAAGGTGAACCAGCTAACTCCCAAGATACGAATACCACGGTCCCAAATCTTCTGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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| CDS CAA 72 bp | GTTCTTCAGAAGATTTGGGACCGTGGTATTCGTATCTaGGGAGTTAGCTGGTTCACCTTTCCTTGTTATGGT | + |
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Preference number: 6 (lower is better) Translates to: VLQKIWDRGIRI*GVSWFTFPCYG Trigger: ACCATAACAAGGAAAGGTGAACCAGCTAACTCCCAAGATACGAATACCACGGTCCCAAATCTTCTGAAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000003908.11 ENSMUST00000106484.8 ENSMUST00000106485.8 ENSMUST00000106486.8 ENSMUST00000239177.2 ENSMUST00000239239.2 |
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