Pregenerated sensors for MAST1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053693Ensembl transcript IDs: ENSMUST00000109741.9, ENSMUST00000119820.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCATCGGGTAGCAACGGGTCCGCGCCCAAGCTTAGGGGTGATTCCTaGCGACCCAGGCGTCGCACGGCGACCTGCCGGGTCGCCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: PSGSNGSAPKLRGDS*RPRRRTATCRVAPG Trigger: TCCTGGGGCGACCCGGCAGGTCGCCGTGCGACGCCTGGGTCGCCAGGAATCACCCCTAAGCTTGGGCGCGGACCCGTTGCTACCCGATGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | GCCCTGGCCACCCCACCTGGGCCATCCTCAGTCTGCACGCTCTGGTaGCTTGTGCAACCCGAGTCACGCTCCAGGGTCCGGCTCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: ALATPPGPSSVCTLW*LVQPESRSRVRLPG Trigger: CCCTGGGAGCCGGACCCTGGAGCGTGACTCGGGTTGCACAAGGCACCAGAGCGTGCAGACTGAGGATGGCCCAGGTGGGGTGGCCAGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | TGGCCTGGCAGCGGCGGCGGCGACGCCTGCGTCGGGGATGGTGTGTaGGCTAGAGGTGACAGCGGGATGTTGCCAGCCGATTTACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: WPGSGGGDACVGDGV*ARGDSGMLPADLQR Trigger: GCGCTGTAAATCGGCTGGCAACATCCCGCTGTCACCTCTAGCGCACACACCATCCCCGACGCAGGCGTCGCCGCCGCCGCTGCCAGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | GCCTTGGCCAGGGCCCTGGCCACCCCACCTGGGCCATCCTCAGTCTaGACGCTCTGGTGCCTTGTGCAACCCGAGTCACGCTCCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: ALARALATPPGPSSV*TLWCLVQPESRSRV Trigger: GACCCTGGAGCGTGACTCGGGTTGCACAAGGCACCAGAGCGTGCAGACTGAGGATGGCCCAGGTGGGGTGGCCAGGGCCCTGGCCAAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | AGTTTGGCAGGGAAGCTCTGCGTGGTATGTGAGCTGCCCACCGTGTaGCCTGGCAGCGGCGGCGGCGACGCCTGCGTCGGGGATGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: SLAGKLCVVCELPTV*PGSGGGDACVGDGV Trigger: CACACCATCCCCGACGCAGGCGTCGCCGCCGCCGCTGCCAGGCCACACGGTGGGCAGCTCACATACCACGCAGAGCTTCCCTGCCAAACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | AGGGCCCTGGCCACCCCACCTGGGCCATCCTCAGTCTGCACGCTCTaGTGCCTTGTGCAACCCGAGTCACGCTCCAGGGTCCGGCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: RALATPPGPSSVCTL*CLVQPESRSRVRLP Trigger: TGGGAGCCGGACCCTGGAGCGTGACTCGGGTTGCACAAGGCACCAGAGCGTGCAGACTGAGGATGGCCCAGGTGGGGTGGCCAGGGCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | GCGATGAGTGTAGTTTGGCAGGGAAGCTCTGCGTGGTATGTGAGCTaGCCACCGTGTGGCCTGGCAGCGGCGGCGGCGACGCCTGCGTCG | + |
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Preference number: 5 (lower is better) Translates to: AMSVVWQGSSAWYVS*PPCGLAAAAATPAS Trigger: CGACGCAGGCGTCGCCGCCGCCGCTGCCAGGCCACACGGTGGGCAGCTCACATACCACGCAGAGCTTCCCTGCCAAACTACACTCATCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | CACGCTCCAGGGTCCGGCTCCCAGGGGTTGTCGCGCGAGGTGGGGTaGAAGCCTCTGTACCTCCCGCGGAATCCTCCTTGCTTGACGCCA | + |
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Preference number: 5 (lower is better) Translates to: HAPGSGSQGLSREVG*KPLYLPRNPPCLTP Trigger: TGGCGTCAAGCAAGGAGGATTCCGCGGGAGGTACAGAGGCTTGCACCCCACCTCGCGCGACAACCCCTGGGAGCCGGACCCTGGAGCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | CCACCCCACCTGGGCCATCCTCAGTCTGCACGCTCTGGTGCCTTGTaGAACCCGAGTCACGCTCCAGGGTCCGGCTCCCAGGGGTTGTCG | + |
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Preference number: 5 (lower is better) Translates to: PPHLGHPQSARSGAL*NPSHAPGSGSQGLS Trigger: CGACAACCCCTGGGAGCCGGACCCTGGAGCGTGACTCGGGTTGCACAAGGCACCAGAGCGTGCAGACTGAGGATGGCCCAGGTGGGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | GGGCGCACGACAGGTGGCGATGAGTGTAGTTTGGCAGGGAAGCTCTaGGTGGTATGTGAGCTGCCCACCGTGTGGCCTGGCAGCGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: GRTTGGDECSLAGKL*VVCELPTVWPGSGG Trigger: GCCGCCGCTGCCAGGCCACACGGTGGGCAGCTCACATACCACGCAGAGCTTCCCTGCCAAACTACACTCATCGCCACCTGTCGTGCGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | GCACGACAGGTGGCGATGAGTGTAGTTTGGCAGGGAAGCTCTGCGTaGTATGTGAGCTGCCCACCGTGTGGCCTGGCAGCGGCGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: ARQVAMSVVWQGSSA*YVSCPPCGLAAAAA Trigger: CGCCGCCGCCGCTGCCAGGCCACACGGTGGGCAGCTCACATACCACGCAGAGCTTCCCTGCCAAACTACACTCATCGCCACCTGTCGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | AAGCTTAGGGGTGATTCCTGGCGACCCAGGCGTCGCACGGCGACCTaGCGGGTCGCCCCAGGACCCTCAATAGGAGGCGTCTCACCATCA | + |
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Preference number: 5 (lower is better) Translates to: KLRGDSWRPRRRTAT*RVAPGPSIGGVSPS Trigger: TGATGGTGAGACGCCTCCTATTGAGGGTCCTGGGGCGACCCGGCAGGTCGCCGTGCGACGCCTGGGTCGCCAGGAATCACCCCTAAGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | CCCTGGCCGAGCAGGCTCTACAACAATGGGCACCGGGGGTGTGCCTaGCTCACCAGAGCTACTGCGCCGGCCTGTCTCATGTTCCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: PWPSRLYNNGHRGCA*LTRATAPACLMFLH Trigger: GTGCAGGAACATGAGACAGGCCGGCGCAGTAGCTCTGGTGAGGCAGGCACACCCCCGGTGCCCATTGTTGTAGAGCCTGCTCGGCCAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 90 bp | CTCCGGGCCCTTAGCGCTTGGGTCCCGCTTGCTGGCCCCAGATGCTaGGACGGGGGTCTTAGGCTCGTGCTGAGACAGCTGCTCCATACT | + |
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Preference number: 5 (lower is better) Translates to: LRALSAWVPLAGPRC*DGGLRLVLRQLLHT Trigger: AGTATGGAGCAGCTGTCTCAGCACGAGCCTAAGACCCCCGTCTCAGCATCTGGGGCCAGCAAGCGGGACCCAAGCGCTAAGGGCCCGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 90 bp | CGTGCCCTCTCCTTGAACTGCCTCTTTGGGGACGCGTGTGTCCAGTaGGCTAGGGGGATCGGAGCTGGGTCGAGGAGGTCTGCGGAGTCG | + |
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Preference number: 5 (lower is better) Translates to: RALSLNCLFGDACVQ*ARGIGAGSRRSAES Trigger: CGACTCCGCAGACCTCCTCGACCCAGCTCCGATCCCCCTAGCTCACTGGACACACGCGTCCCCAAAGAGGCAGTTCAAGGAGAGGGCACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | TCAGATGTGTCGTCTTGCTCCGGAGTGTTGGAGCCCCCGCTGTCCTaGTCCTCCAGGCGCACCACATCTGGAAAGGGGTCCCGAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SDVSSCSGVLEPPLS*SSRRTTSGKGSRVR Trigger: CCTCACTCGGGACCCCTTTCCAGATGTGGTGCGCCTGGAGGAGCAGGACAGCGGGGGCTCCAACACTCCGGAGCAAGACGACACATCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS GCA 90 bp | TGTAGTTTCGGTGACAGCCCGTGCAAGGTGCTGGGCCTGATGTGGTaGGAGGCGGATGAGGCGGGGGAATTAGGCGTGCTGGAAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: CSFGDSPCKVLGLMW*EADEAGELGVLEAG Trigger: GCCAGCTTCCAGCACGCCTAATTCCCCCGCCTCATCCGCCTCGCACCACATCAGGCCCAGCACCTTGCACGGGCTGTCACCGAAACTACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | AGGTGCTGCTGCGACCCTCAGATGTGTCGTCTTGCTCCGGAGTGTTaGAGCCCCCGCTGTCCTGCTCCTCCAGGCGCACCACATCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: RCCCDPQMCRLAPEC*SPRCPAPPGAPHLE Trigger: TTCCAGATGTGGTGCGCCTGGAGGAGCAGGACAGCGGGGGCTCCAACACTCCGGAGCAAGACGACACATCTGAGGGTCGCAGCAGCACCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS CCA 90 bp | AGCGTGCGGGTAGTCCGTGCGTGGGCGAGCCCGGAAGACTGTCGCTaGACGACAAGGACCGGTTCAAAGAGGACAGCGATCGACTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: SVRVVRAWASPEDCR*TTRTGSKRTAIDWC Trigger: ACACCAGTCGATCGCTGTCCTCTTTGAACCGGTCCTTGTCGTCCAGCGACAGTCTTCCGGGCTCGCCCACGCACGGACTACCCGCACGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | GACAGCGGGATGTTGCCAGCCGATTTACAGCGCGCTGAGCGGTACTaGCGGTGTAGTTTCGGTGACAGCCCGTGCAAGGTGCTGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: DSGMLPADLQRAERY*RCSFGDSPCKVLGL Trigger: CAGGCCCAGCACCTTGCACGGGCTGTCACCGAAACTACACCGCCAGTACCGCTCAGCGCGCTGTAAATCGGCTGGCAACATCCCGCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | CACTTTTGGGGCGCGGGCGCACGACAGGTGGCGATGAGTGTAGTTTaGCAGGGAAGCTCTGCGTGGTATGTGAGCTGCCCACCGTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: HFWGAGARQVAMSVV*QGSSAWYVSCPPCG Trigger: GCCACACGGTGGGCAGCTCACATACCACGCAGAGCTTCCCTGCCAAACTACACTCATCGCCACCTGTCGTGCGCCCGCGCCCCAAAAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 90 bp | CGCTTGCTGGCCCCAGATGCTGAGACGGGGGTCTTAGGCTCGTGCTaGGACAGCTGCTCCATACTGCTGTACACCTTGCTGAAGCGCGGC | + |
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Preference number: 5 (lower is better) Translates to: RLLAPDAETGVLGSC*DSCSILLYTLLKRG Trigger: GCCGCGCTTCAGCAAGGTGTACAGCAGTATGGAGCAGCTGTCTCAGCACGAGCCTAAGACCCCCGTCTCAGCATCTGGGGCCAGCAAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 90 bp | GAGGTCTGCGGAGTCGAGCCTCATCTTCATCCTCTTGAGGGGCAGTaGAGCGGCTGGGCTCCAGCAGTGCTGAGAAACGTCTGCGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: EVCGVEPHLHPLEGQ*SGWAPAVLRNVCAL Trigger: GAGCGCGCAGACGTTTCTCAGCACTGCTGGAGCCCAGCCGCTTCACTGCCCCTCAAGAGGATGAAGATGAGGCTCGACTCCGCAGACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | CTACAACAATGGGCACCGGGGGTGTGCCTGCCTCACCAGAGCTACTaGGCCGGCCTGTCTCATGTTCCTGCACTGGACTTAGCGCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LQQWAPGVCLPHQSY*AGLSHVPALDLALP Trigger: AGGCAGCGCTAAGTCCAGTGCAGGAACATGAGACAGGCCGGCGCAGTAGCTCTGGTGAGGCAGGCACACCCCCGGTGCCCATTGTTGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | GCCTGCAGGAGTCACAGCTTCAGCAGGACACCGGGAGTTCAACCCTaGTTCAGGCTTGGTGCCTGGGACCATGAGGGAAGCAGGTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: ACRSHSFSRTPGVQP*FRLGAWDHEGSRWD Trigger: GTCCCACCTGCTTCCCTCATGGTCCCAGGCACCAAGCCTGAAGCAGGGTTGAACTCCCGGTGTCCTGCTGAAGCTGTGACTCCTGCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | GCTCCAGCAGTGCTGAGAAACGTCTGCGCGCTCCCAGCGGGGGACTaGCCTCTCCTTCCAGAAAACTGGCTTCAGACGCTGAGAAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: APAVLRNVCALPAGD*PLLPENWLQTLRSA Trigger: AGCGCTTCTCAGCGTCTGAAGCCAGTTTTCTGGAAGGAGAGGCCAGTCCCCCGCTGGGAGCGCGCAGACGTTTCTCAGCACTGCTGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | ACCCAGCGCTCCCTGCCCCTTGGGGCATCAGGCATCAGAGGCATCTaGGCTACAGGTTCCTTCAATCCCTTGGAGTCTGTGCCCAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: TQRSLPLGASGIRGI*ATGSFNPLESVPRG Trigger: GCCTCTGGGCACAGACTCCAAGGGATTGAAGGAACCTGTAGCCCAGATGCCTCTGATGCCTGATGCCCCAAGGGGCAGGGAGCGCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | TGCCGCAGTAGCCCTGTCCAGTCCAGGTCTCGGAAGAAACTATGCTaGTTCACCTCAAAAGCACCACCTGCCCCAAGCCGGACCAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: CRSSPVQSRSRKKLC*FTSKAPPAPSRTRG Trigger: CCCCCTGGTCCGGCTTGGGGCAGGTGGTGCTTTTGAGGTGAAGCAGCATAGTTTCTTCCGAGACCTGGACTGGACAGGGCTACTGCGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | GTTCGAGACGGTCGCTTCTCCACAGCAAGATCCCCAGACAGCTGCTaGTGCCTTGCCCTTCGCAAAACCAGGTCGTTGGTGGCCCTAGGG | + |
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Preference number: 5 (lower is better) Translates to: VRDGRFSTARSPDSC*CLALRKTRSLVALG Trigger: CCCTAGGGCCACCAACGACCTGGTTTTGCGAAGGGCAAGGCACCAGCAGCTGTCTGGGGATCTTGCTGTGGAGAAGCGACCGTCTCGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | TCTGTACCTCCCGCGGAATCCTCCTTGCTTGACGCCATAGGTCTCTaGACACCATCGGGTAGCAACGGGTCCGCGCCCAAGCTTAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: SVPPAESSLLDAIGL*TPSGSNGSAPKLRG Trigger: ACCCCTAAGCTTGGGCGCGGACCCGTTGCTACCCGATGGTGTCCAGAGACCTATGGCGTCAAGCAAGGAGGATTCCGCGGGAGGTACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | TTTTCCGGTTGCTGGTACGGCAACTCTTGGTGCGGCGAAACATGCTaGCGCCGGGGAAGGAGGGCATCGAGAAATTGGAAAGCGCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: FSGCWYGNSWCGETC*RRGRRASRNWKARS Trigger: GGACCGCGCTTTCCAATTTCTCGATGCCCTCCTTCCCCGGCGGCAGCATGTTTCGCCGCACCAAGAGTTGCCGTACCAGCAACCGGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS GCA 90 bp | CCAGTTCGAGACGGTCGCTTCTCCACAGCAAGATCCCCAGACAGCTaGTGGTGCCTTGCCCTTCGCAAAACCAGGTCGTTGGTGGCCCTA | + |
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Preference number: 5 (lower is better) Translates to: PVRDGRFSTARSPDS*WCLALRKTRSLVAL Trigger: TAGGGCCACCAACGACCTGGTTTTGCGAAGGGCAAGGCACCAGCAGCTGTCTGGGGATCTTGCTGTGGAGAAGCGACCGTCTCGAACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | TACAGGTTCCTTCAATCCCTTGGAGTCTGTGCCCAGAGGCTGGGGTaGCTGGGTCTTGACCCCTGGCCGAGCAGGCTCTACAACAATGGG | + |
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Preference number: 5 (lower is better) Translates to: YRFLQSLGVCAQRLG*LGLDPWPSRLYNNG Trigger: CCCATTGTTGTAGAGCCTGCTCGGCCAGGGGTCAAGACCCAGGCACCCCAGCCTCTGGGCACAGACTCCAAGGGATTGAAGGAACCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | CAAAGTCACTTTCACCGGGAGGTTTCTTGGCCTTGGAGGTGCTGCTaGGACCCTCAGATGTGTCGTCTTGCTCCGGAGTGTTGGAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: QSHFHREVSWPWRCC*DPQMCRLAPECWSP Trigger: GGGGCTCCAACACTCCGGAGCAAGACGACACATCTGAGGGTCGCAGCAGCACCTCCAAGGCCAAGAAACCTCCCGGTGAAAGTGACTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS GCA 90 bp | GCCTGCTCCGCTATGGACCTAGAGATGCAGGGCAGGGGGTTGGTCTaGAAGAGGCTAGATATTAGAAGCTGTGCATCTGTGGGCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: ACSAMDLEMQGRGLV*KRLDIRSCASVGRA Trigger: GGCCCTGCCCACAGATGCACAGCTTCTAATATCTAGCCTCTTGCAGACCAACCCCCTGCCCTGCATCTCTAGGTCCATAGCGGAGCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119820.2 |
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| CDS GCA 90 bp | GGAAGTCCTTTCGGAAATCAGGGTGTCCCACTTCCAGGCTGTGTTTaGGCAGTGCGCCCTTCTTGTCTGCTCCCAGCGAAGCCCCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: GSPFGNQGVPLPGCV*AVRPSCLLPAKPLV Trigger: AACTAGGGGCTTCGCTGGGAGCAGACAAGAAGGGCGCACTGCGCAAACACAGCCTGGAAGTGGGACACCCTGATTTCCGAAAGGACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | GCGAGCAGGAGGAGAATTGGCGGATCTCCACGGGCTCCTCTTCGGTaGTGTCGTCCTCATCATAGGAGTTCACATGGTGATACCTGTCGG | + |
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Preference number: 5 (lower is better) Translates to: ASRRRIGGSPRAPLR*CRPHHRSSHGDTCR Trigger: CCGACAGGTATCACCATGTGAACTCCTATGATGAGGACGACACCACCGAAGAGGAGCCCGTGGAGATCCGCCAATTCTCCTCCTGCTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | TGTCAAAGTCACTTTCACCGGGAGGTTTCTTGGCCTTGGAGGTGCTaGTGCGACCCTCAGATGTGTCGTCTTGCTCCGGAGTGTTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: CQSHFHREVSWPWRC*CDPQMCRLAPECWS Trigger: GCTCCAACACTCCGGAGCAAGACGACACATCTGAGGGTCGCAGCAGCACCTCCAAGGCCAAGAAACCTCCCGGTGAAAGTGACTTTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS GCA 90 bp | GGACCCTCAATAGGAGGCGTCTCACCATCAGACTCAGCGAGGCTATaGAGGGCCAGCTCACCATGGAAGTCCTTTCGGAAATCAGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: GPSIGGVSPSDSARL*RASSPWKSFRKSGC Trigger: ACACCCTGATTTCCGAAAGGACTTCCATGGTGAGCTGGCCCTGCATAGCCTCGCTGAGTCTGATGGTGAGACGCCTCCTATTGAGGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 90 bp | GTCTCACCATCAGACTCAGCGAGGCTATGCAGGGCCAGCTCACCATaGAAGTCCTTTCGGAAATCAGGGTGTCCCACTTCCAGGCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: VSPSDSARLCRASSP*KSFRKSGCPTSRLC Trigger: ACACAGCCTGGAAGTGGGACACCCTGATTTCCGAAAGGACTTCCATGGTGAGCTGGCCCTGCATAGCCTCGCTGAGTCTGATGGTGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 90 bp | CATGTAGACACGGATGGCTCGCAGTGTGAACCCATATTTCTTGCCTaGGCGTTGGATGGTGATGGGGGAACGGAGTCCACTGACAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: HVDTDGSQCEPIFLA*ALDGDGGTESTDSW Trigger: CCAGCTGTCAGTGGACTCCGTTCCCCCATCACCATCCAACGCTCAGGCAAGAAATATGGGTTCACACTGCGAGCCATCCGTGTCTACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 90 bp | AAGAGGACAGCGATCGACTGGTGTGCAGCAGGTTCGACTGCTTTGTaGTCTTCCGAAAGAGAGAGCTCCGCTTCTTGCTCTCCTGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: KRTAIDWCAAGSTAL*SSERESSASCSPGR Trigger: ACGGCCAGGAGAGCAAGAAGCGGAGCTCTCTCTTTCGGAAGATCACAAAGCAGTCGAACCTGCTGCACACCAGTCGATCGCTGTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | CGGTTCAAAGAGGACAGCGATCGACTGGTGTGCAGCAGGTTCGACTaGTTTGTGATCTTCCGAAAGAGAGAGCTCCGCTTCTTGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RFKEDSDRLVCSRFD*FVIFRKRELRFLLS Trigger: GGAGAGCAAGAAGCGGAGCTCTCTCTTTCGGAAGATCACAAAGCAGTCGAACCTGCTGCACACCAGTCGATCGCTGTCCTCTTTGAACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | CTGGACGACAAGGACCGGTTCAAAGAGGACAGCGATCGACTGGTGTaGAGCAGGTTCGACTGCTTTGTGATCTTCCGAAAGAGAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: LDDKDRFKEDSDRLV*SRFDCFVIFRKREL Trigger: GAGCTCTCTCTTTCGGAAGATCACAAAGCAGTCGAACCTGCTGCACACCAGTCGATCGCTGTCCTCTTTGAACCGGTCCTTGTCGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 90 bp | TGTACATATGTATACAGGCATCTGTACAGCACAGCACCGAAAGCCTaGTCCGCTATGGACCTAGAGATGCAGGGCAGGGGGTTGGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: CTYVYRHLYSTAPKA*SAMDLEMQGRGLVC Trigger: GCAGACCAACCCCCTGCCCTGCATCTCTAGGTCCATAGCGGAGCAGGCTTTCGGTGCTGTGCTGTACAGATGCCTGTATACATATGTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119820.2 |
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| CDS CCA 90 bp | CCATTTTGGCTTTGTAACTGCTGCGCCTGGCAGGCCCAATCCGGATaGAAGTGTTTTCAAAGGGTGTGGTGGTCACAGCTACTTTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: PFWLCNCCAWQAQSG*KCFQRVWWSQLLCC Trigger: GCAACAAAGTAGCTGTGACCACCACACCCTTTGAAAACACTTCCATCCGGATTGGGCCTGCCAGGCGCAGCAGTTACAAAGCCAAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 72 bp | AGCAACGGGTCCGCGCCCAAGCTTAGGGGTGATTCCTaGCGACCCAGGCGTCGCACGGCGACCTGCCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SNGSAPKLRGDS*RPRRRTATCRV Trigger: GACCCGGCAGGTCGCCGTGCGACGCCTGGGTCGCCAGGAATCACCCCTAAGCTTGGGCGCGGACCCGTTGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | AGCGGCGGCGGCGACGCCTGCGTCGGGGATGGTGTGTaGGCTAGAGGTGACAGCGGGATGTTGCCAGCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: SGGGDACVGDGV*ARGDSGMLPAD Trigger: ATCGGCTGGCAACATCCCGCTGTCACCTCTAGCGCACACACCATCCCCGACGCAGGCGTCGCCGCCGCCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | GGGTCCGGCTCCCAGGGGTTGTCGCGCGAGGTGGGGTaGAAGCCTCTGTACCTCCCGCGGAATCCTCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSGSQGLSREVG*KPLYLPRNPPC Trigger: GCAAGGAGGATTCCGCGGGAGGTACAGAGGCTTGCACCCCACCTCGCGCGACAACCCCTGGGAGCCGGACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 72 bp | CTCCAGGGTCCGGCTCCCAGGGGTTGTCGCGCGAGGTaGGGTGCAAGCCTCTGTACCTCCCGCGGAATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQGPAPRGCRAR*GASLCTSRGIL Trigger: GAGGATTCCGCGGGAGGTACAGAGGCTTGCACCCCACCTCGCGCGACAACCCCTGGGAGCCGGACCCTGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | GCCTTGTGCAACCCGAGTCACGCTCCAGGGTCCGGCTCCCAGGGGTaGTCGCGCGAGGTGGGGTGCAAGCCTCTGTACCTCCCGCGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ALCNPSHAPGSGSQG*SREVGCKPLYLPRN Trigger: ATTCCGCGGGAGGTACAGAGGCTTGCACCCCACCTCGCGCGACAACCCCTGGGAGCCGGACCCTGGAGCGTGACTCGGGTTGCACAAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | TGGCCACCCCACCTGGGCCATCCTCAGTCTGCACGCTCTGGTGCCTaGTGCAACCCGAGTCACGCTCCAGGGTCCGGCTCCCAGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WPPHLGHPQSARSGA*CNPSHAPGSGSQGL Trigger: CAACCCCTGGGAGCCGGACCCTGGAGCGTGACTCGGGTTGCACAAGGCACCAGAGCGTGCAGACTGAGGATGGCCCAGGTGGGGTGGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 72 bp | TTGAGGGGCAGTGAAGCGGCTGGGCTCCAGCAGTGCTaGGAAACGTCTGCGCGCTCCCAGCGGGGGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRGSEAAGLQQC*ETSARSQRGTG Trigger: GCCAGTCCCCCGCTGGGAGCGCGCAGACGTTTCTCAGCACTGCTGGAGCCCAGCCGCTTCACTGCCCCTCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | GTAGTTTGGCAGGGAAGCTCTGCGTGGTATGTGAGCTaGCCACCGTGTGGCCTGGCAGCGGCGGCGGCGACG | + |
|
Preference number: 6 (lower is better) Translates to: VVWQGSSAWYVS*PPCGLAAAAAT Trigger: CGTCGCCGCCGCCGCTGCCAGGCCACACGGTGGGCAGCTCACATACCACGCAGAGCTTCCCTGCCAAACTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS CAA 72 bp | AACCCGAGTCACGCTCCAGGGTCCGGCTCCCAGGGGTaGTCGCGCGAGGTGGGGTGCAAGCCTCTGTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: NPSHAPGSGSQG*SREVGCKPLYL Trigger: GAGGTACAGAGGCTTGCACCCCACCTCGCGCGACAACCCCTGGGAGCCGGACCCTGGAGCGTGACTCGGGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS CAA 90 bp | CTCCAGGTCTTCTCACGCAGAGTCAGGCCACCCAGTCCCTCCCTCTaGCCGGCCACTTTCTCCTCCGGGCCCTTAGCGCTTGGGTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LQVFSRRVRPPSPSL*PATFSSGPLALGSR Trigger: GCGGGACCCAAGCGCTAAGGGCCCGGAGGAGAAAGTGGCCGGCAAGAGGGAGGGACTGGGTGGCCTGACTCTGCGTGAGAAGACCTGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS GCA 72 bp | GGTGACAGCCCGTGCAAGGTGCTGGGCCTGATGTGGTaGGAGGCGGATGAGGCGGGGGAATTAGGCGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GDSPCKVLGLMW*EADEAGELGVL Trigger: CAGCACGCCTAATTCCCCCGCCTCATCCGCCTCGCACCACATCAGGCCCAGCACCTTGCACGGGCTGTCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS GCA 72 bp | CTGGGCCATCCTCAGTCTGCACGCTCTGGTGCCTTGTaGAACCCGAGTCACGCTCCAGGGTCCGGCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGHPQSARSGAL*NPSHAPGSGSQ Trigger: CTGGGAGCCGGACCCTGGAGCGTGACTCGGGTTGCACAAGGCACCAGAGCGTGCAGACTGAGGATGGCCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS GCA 72 bp | ACCCCACCTGGGCCATCCTCAGTCTGCACGCTCTGGTaGCTTGTGCAACCCGAGTCACGCTCCAGGGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TPPGPSSVCTLW*LVQPESRSRVR Trigger: CCGGACCCTGGAGCGTGACTCGGGTTGCACAAGGCACCAGAGCGTGCAGACTGAGGATGGCCCAGGTGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS GCA 72 bp | GCCGAGCAGGCTCTACAACAATGGGCACCGGGGGTGTaGCTGCCTCACCAGAGCTACTGCGCCGGCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AEQALQQWAPGV*LPHQSYCAGLS Trigger: AGACAGGCCGGCGCAGTAGCTCTGGTGAGGCAGGCACACCCCCGGTGCCCATTGTTGTAGAGCCTGCTCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 72 bp | AGCTATGTGTGGGCGAGCGTGCGGGTAGTCCGTGCGTaGGCGAGCCCGGAAGACTGTCGCTGGACGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SYVWASVRVVRA*ASPEDCRWTTR Trigger: CCTTGTCGTCCAGCGACAGTCTTCCGGGCTCGCCCACGCACGGACTACCCGCACGCTCGCCCACACATAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | CTGCGACCCTCAGATGTGTCGTCTTGCTCCGGAGTGTaGGAGCCCCCGCTGTCCTGCTCCTCCAGGCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: LRPSDVSSCSGV*EPPLSCSSRRT Trigger: GGTGCGCCTGGAGGAGCAGGACAGCGGGGGCTCCAACACTCCGGAGCAAGACGACACATCTGAGGGTCGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
||
| CDS CAA 72 bp | CGCTTGAGCAACGGCGAGCGTGGTGGCTCTGCACTTTaGGGGCGCGGGCGCACGACAGGTGGCGATGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RLSNGERGGSAL*GRGRTTGGDEC Trigger: ACACTCATCGCCACCTGTCGTGCGCCCGCGCCCCAAAAGTGCAGAGCCACCACGCTCGCCGTTGCTCAAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | CACCTGGGCCATCCTCAGTCTGCACGCTCTGGTGCCTaGTGCAACCCGAGTCACGCTCCAGGGTCCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HLGHPQSARSGA*CNPSHAPGSGS Trigger: GGAGCCGGACCCTGGAGCGTGACTCGGGTTGCACAAGGCACCAGAGCGTGCAGACTGAGGATGGCCCAGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS TCA 72 bp | GCACGGCGGGAGAGCGGCGGCCACCATCCTCGTCGGTaGTGCTCTCGGTGCTGCCGAAGTGTTTGGACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ARRESGGHHPRR*CSRCCRSVWTE Trigger: TTCTGTCCAAACACTTCGGCAGCACCGAGAGCATCACCGACGAGGATGGTGGCCGCCGCTCTCCCGCCGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
||
| CDS GCA 72 bp | TCGTCTTGCTCCGGAGTGTTGGAGCCCCCGCTGTCCTaGTCCTCCAGGCGCACCACATCTGGAAAGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSCSGVLEPPLS*SSRRTTSGKGS Trigger: GGACCCCTTTCCAGATGTGGTGCGCCTGGAGGAGCAGGACAGCGGGGGCTCCAACACTCCGGAGCAAGACGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
||
| CDS CCA 72 bp | TGCGACCCTCAGATGTGTCGTCTTGCTCCGGAGTGTTaGAGCCCCCGCTGTCCTGCTCCTCCAGGCGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: CDPQMCRLAPEC*SPRCPAPPGAP Trigger: TGGTGCGCCTGGAGGAGCAGGACAGCGGGGGCTCCAACACTCCGGAGCAAGACGACACATCTGAGGGTCGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
||
| CDS CCA 72 bp | TTCGGTGACAGCCCGTGCAAGGTGCTGGGCCTGATGTaGTGCGAGGCGGATGAGGCGGGGGAATTAGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: FGDSPCKVLGLM*CEADEAGELGV Trigger: CACGCCTAATTCCCCCGCCTCATCCGCCTCGCACCACATCAGGCCCAGCACCTTGCACGGGCTGTCACCGAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | GAGGTGCTGCTGCGACCCTCAGATGTGTCGTCTTGCTCCGGAGTGTaGGAGCCCCCGCTGTCCTGCTCCTCCAGGCGCACCACATCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EVLLRPSDVSSCSGV*EPPLSCSSRRTTSG Trigger: TCCAGATGTGGTGCGCCTGGAGGAGCAGGACAGCGGGGGCTCCAACACTCCGGAGCAAGACGACACATCTGAGGGTCGCAGCAGCACCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
||
| CDS TCA 72 bp | CTTAGCGCTTGGGTCCCGCTTGCTGGCCCCAGATGCTaGGACGGGGGTCTTAGGCTCGTGCTGAGACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSAWVPLAGPRC*DGGLRLVLRQL Trigger: CAGCTGTCTCAGCACGAGCCTAAGACCCCCGTCTCAGCATCTGGGGCCAGCAAGCGGGACCCAAGCGCTAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS TCA 72 bp | CCTTCGCAAAACCAGGTCGTTGGTGGCCCTAGGGCCTaGTGGGTCTCCATCCTTGGAGGGTGGGCCGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PSQNQVVGGPRA*WVSILGGWAEV Trigger: GACCTCGGCCCACCCTCCAAGGATGGAGACCCATCAGGCCCTAGGGCCACCAACGACCTGGTTTTGCGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS GCA 72 bp | TGGGCACCGGGGGTGTGCCTGCCTCACCAGAGCTACTaGGCCGGCCTGTCTCATGTTCCTGCACTGGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: WAPGVCLPHQSY*AGLSHVPALDL Trigger: TAAGTCCAGTGCAGGAACATGAGACAGGCCGGCGCAGTAGCTCTGGTGAGGCAGGCACACCCCCGGTGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | AGCAGGCTCTACAACAATGGGCACCGGGGGTGTGCCTaGCTCACCAGAGCTACTGCGCCGGCCTGTCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SRLYNNGHRGCA*LTRATAPACLM Trigger: CATGAGACAGGCCGGCGCAGTAGCTCTGGTGAGGCAGGCACACCCCCGGTGCCCATTGTTGTAGAGCCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 72 bp | GGCGCGGGCGCACGACAGGTGGCGATGAGTGTAGTTTaGCAGGGAAGCTCTGCGTGGTATGTGAGCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAGARQVAMSVV*QGSSAWYVSCP Trigger: TGGGCAGCTCACATACCACGCAGAGCTTCCCTGCCAAACTACACTCATCGCCACCTGTCGTGCGCCCGCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 72 bp | CCCGCGGAATCCTCCTTGCTTGACGCCATAGGTCTCTaGACACCATCGGGTAGCAACGGGTCCGCGCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PAESSLLDAIGL*TPSGSNGSAPK Trigger: CTTGGGCGCGGACCCGTTGCTACCCGATGGTGTCCAGAGACCTATGGCGTCAAGCAAGGAGGATTCCGCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | CTTGGAGGTGCTGCTGCGACCCTCAGATGTGTCGTCTaGCTCCGGAGTGTTGGAGCCCCCGCTGTCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGGAAATLRCVV*LRSVGAPAVLL Trigger: GAGCAGGACAGCGGGGGCTCCAACACTCCGGAGCAAGACGACACATCTGAGGGTCGCAGCAGCACCTCCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS CAA 90 bp | AAAACCAGGTCGTTGGTGGCCCTAGGGCCTGATGGGTCTCCATCCTaGGAGGGTGGGCCGAGGTCACCTGGATGTGAGCGCTCAGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KTRSLVALGPDGSPS*EGGPRSPGCERSVA Trigger: GGCCACTGAGCGCTCACATCCAGGTGACCTCGGCCCACCCTCCAAGGATGGAGACCCATCAGGCCCTAGGGCCACCAACGACCTGGTTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | TCCCCAGACAGCTGCTGGTGCCTTGCCCTTCGCAAAACCAGGTCGTaGGTGGCCCTAGGGCCTGATGGGTCTCCATCCTTGGAGGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPDSCWCLALRKTRS*VALGPDGSPSLEGG Trigger: CCCACCCTCCAAGGATGGAGACCCATCAGGCCCTAGGGCCACCAACGACCTGGTTTTGCGAAGGGCAAGGCACCAGCAGCTGTCTGGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | GCACTTTTGGGGCGCGGGCGCACGACAGGTGGCGATGAGTGTAGTTaGGCAGGGAAGCTCTGCGTGGTATGTGAGCTGCCCACCGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ALLGRGRTTGGDECS*AGKLCVVCELPTVW Trigger: CCACACGGTGGGCAGCTCACATACCACGCAGAGCTTCCCTGCCAAACTACACTCATCGCCACCTGTCGTGCGCCCGCGCCCCAAAAGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | GCGCGAGGTGGGGTGCAAGCCTCTGTACCTCCCGCGGAATCCTCCTaGCTTGACGCCATAGGTCTCTGGACACCATCGGGTAGCAACGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARGGVQASVPPAESS*LDAIGLWTPSGSNG Trigger: CCCGTTGCTACCCGATGGTGTCCAGAGACCTATGGCGTCAAGCAAGGAGGATTCCGCGGGAGGTACAGAGGCTTGCACCCCACCTCGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | TGGTCCGCTCTTCCACCTCCTCTAGCACCCAGCGCTCCCTGCCCCTaGGGGCATCAGGCATCAGAGGCATCTGGGCTACAGGTTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: WSALPPPLAPSAPCP*GHQASEASGLQVPS Trigger: TGAAGGAACCTGTAGCCCAGATGCCTCTGATGCCTGATGCCCCAAGGGGCAGGGAGCGCTGGGTGCTAGAGGAGGTGGAAGAGCGGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 72 bp | GTGCTGAGAAACGTCTGCGCGCTCCCAGCGGGGGACTaGCCTCTCCTTCCAGAAAACTGGCTTCAGACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLRNVCALPAGD*PLLPENWLQTL Trigger: CAGCGTCTGAAGCCAGTTTTCTGGAAGGAGAGGCCAGTCCCCCGCTGGGAGCGCGCAGACGTTTCTCAGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 72 bp | GTAGTCCGTGCGTGGGCGAGCCCGGAAGACTGTCGCTaGACGACAAGGACCGGTTCAAAGAGGACAGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: VVRAWASPEDCR*TTRTGSKRTAI Trigger: GATCGCTGTCCTCTTTGAACCGGTCCTTGTCGTCCAGCGACAGTCTTCCGGGCTCGCCCACGCACGGACTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | AGGAGGTCTGCGGAGTCGAGCCTCATCTTCATCCTCTaGAGGGGCAGTGAAGCGGCTGGGCTCCAGCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRSAESSLIFIL*RGSEAAGLQQC Trigger: GCACTGCTGGAGCCCAGCCGCTTCACTGCCCCTCAAGAGGATGAAGATGAGGCTCGACTCCGCAGACCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | TCAGGGTGTCCCACTTCCAGGCTGTGTTTGCGCAGTGCGCCCTTCTaGTCTGCTCCCAGCGAAGCCCCTAGTTTCTCCGCTGACTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: SGCPTSRLCLRSAPF*SAPSEAPSFSADCT Trigger: CGTGCAGTCAGCGGAGAAACTAGGGGCTTCGCTGGGAGCAGACAAGAAGGGCGCACTGCGCAAACACAGCCTGGAAGTGGGACACCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 72 bp | TCCTTGAACTGCCTCTTTGGGGACGCGTGTGTCCAGTaGGCTAGGGGGATCGGAGCTGGGTCGAGGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLNCLFGDACVQ*ARGIGAGSRRS Trigger: AGACCTCCTCGACCCAGCTCCGATCCCCCTAGCTCACTGGACACACGCGTCCCCAAAGAGGCAGTTCAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | GGTTGCTGGTACGGCAACTCTTGGTGCGGCGAAACATaGTGCCGCCGGGGAAGGAGGGCATCGAGAAATTGG | + |
|
Preference number: 6 (lower is better) Translates to: GCWYGNSWCGET*CRRGRRASRNW Trigger: CCAATTTCTCGATGCCCTCCTTCCCCGGCGGCAGCATGTTTCGCCGCACCAAGAGTTGCCGTACCAGCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS GCA 72 bp | GGCGCGGGCGAAGTCCCGCAGCTTCTCTTCCATCTGTaGAGTGGCCTTTGGGAACCGCTCCTTGTACACATG | + |
|
Preference number: 6 (lower is better) Translates to: GAGEVPQLLFHL*SGLWEPLLVHM Trigger: CATGTGTACAAGGAGCGGTTCCCAAAGGCCACTGCACAGATGGAAGAGAAGCTGCGGGACTTCGCCCGCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
||
| CDS CAA 72 bp | CCCACTTCCAGGCTGTGTTTGCGCAGTGCGCCCTTCTaGTCTGCTCCCAGCGAAGCCCCTAGTTTCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PTSRLCLRSAPF*SAPSEAPSFSA Trigger: AGCGGAGAAACTAGGGGCTTCGCTGGGAGCAGACAAGAAGGGCGCACTGCGCAAACACAGCCTGGAAGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 72 bp | GGAGTCGAGCCTCATCTTCATCCTCTTGAGGGGCAGTaGAGCGGCTGGGCTCCAGCAGTGCTGAGAAACGTC | + |
|
Preference number: 6 (lower is better) Translates to: GVEPHLHPLEGQ*SGWAPAVLRNV Trigger: GACGTTTCTCAGCACTGCTGGAGCCCAGCCGCTTCACTGCCCCTCAAGAGGATGAAGATGAGGCTCGACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS TCA 72 bp | GGAGAGAGATCGAGGGGACATGGGACTAGCCAGGGGTaGGCCTCCATGTGGGTCCACTGCAGGAATCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: GERSRGHGTSQG*ASMWVHCRNHD Trigger: GTCATGATTCCTGCAGTGGACCCACATGGAGGCTCACCCCTGGCTAGTCCCATGTCCCCTCGATCTCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS GCA 72 bp | CACTTTCACCGGGAGGTTTCTTGGCCTTGGAGGTGCTaGTGCGACCCTCAGATGTGTCGTCTTGCTCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HFHREVSWPWRC*CDPQMCRLAPE Trigger: CTCCGGAGCAAGACGACACATCTGAGGGTCGCAGCAGCACCTCCAAGGCCAAGAAACCTCCCGGTGAAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
||
| CDS GCA 72 bp | AGATGCAGGGCTAGGTGCCCCAGTTTTGGTGAGGCCTaGAGGAGTCACAGCTTCAGCAGGACACCGGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RCRARCPSFGEA*RSHSFSRTPGV Trigger: AACTCCCGGTGTCCTGCTGAAGCTGTGACTCCTGCAGGCCTCACCAAAACTGGGGCACCTAGCCCTGCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS CCA 72 bp | GGTCGCTTCTCCACAGCAAGATCCCCAGACAGCTGCTaGTGCCTTGCCCTTCGCAAAACCAGGTCGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GRFSTARSPDSC*CLALRKTRSLV Trigger: CACCAACGACCTGGTTTTGCGAAGGGCAAGGCACCAGCAGCTGTCTGGGGATCTTGCTGTGGAGAAGCGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS CCA 72 bp | TCAGAGGCATCTGGGCTACAGGTTCCTTCAATCCCTTaGAGTCTGTGCCCAGAGGCTGGGGTGCCTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SEASGLQVPSIP*SLCPEAGVPGS Trigger: AGACCCAGGCACCCCAGCCTCTGGGCACAGACTCCAAGGGATTGAAGGAACCTGTAGCCCAGATGCCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS CAA 72 bp | ATCAGAGGCATCTGGGCTACAGGTTCCTTCAATCCCTaGGAGTCTGTGCCCAGAGGCTGGGGTGCCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: IRGIWATGSFNP*ESVPRGWGAWV Trigger: GACCCAGGCACCCCAGCCTCTGGGCACAGACTCCAAGGGATTGAAGGAACCTGTAGCCCAGATGCCTCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
||
| CDS CAA 90 bp | TGGAAGTCCTTTCGGAAATCAGGGTGTCCCACTTCCAGGCTGTGTTaGCGCAGTGCGCCCTTCTTGTCTGCTCCCAGCGAAGCCCCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: WKSFRKSGCPTSRLC*RSAPFLSAPSEAPS Trigger: ACTAGGGGCTTCGCTGGGAGCAGACAAGAAGGGCGCACTGCGCAAACACAGCCTGGAAGTGGGACACCCTGATTTCCGAAAGGACTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | AAGCAGGTGGGACTGAAGGAGCTGCACTGCGGGGTACATTCTTTGTaGGGACTAGGGTTGGAGTCTGGGGGTCAGGAGAGAGTTTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: KQVGLKELHCGVHSL*GLGLESGGQERVWG Trigger: CCCCCAAACTCTCTCCTGACCCCCAGACTCCAACCCTAGTCCCAACAAAGAATGTACCCCGCAGTGCAGCTCCTTCAGTCCCACCTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | GGGAAGCAGGTGGGACTGAAGGAGCTGCACTGCGGGGTACATTCTTaGTTGGGACTAGGGTTGGAGTCTGGGGGTCAGGAGAGAGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GKQVGLKELHCGVHS*LGLGLESGGQERVW Trigger: CCAAACTCTCTCCTGACCCCCAGACTCCAACCCTAGTCCCAACAAAGAATGTACCCCGCAGTGCAGCTCCTTCAGTCCCACCTGCTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 72 bp | GGGGTCGCGGTAGAGTCGGAGAAGTGCTTGTCAGGATaGGGCTTTTCCGGTTGCTGGTACGGCAACTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GVAVESEKCLSG*GFSGCWYGNSW Trigger: CCAAGAGTTGCCGTACCAGCAACCGGAAAAGCCTCATCCTGACAAGCACTTCTCCGACTCTACCGCGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS GCA 72 bp | TGCTGGTACGGCAACTCTTGGTGCGGCGAAACATGCTaGCGCCGGGGAAGGAGGGCATCGAGAAATTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CWYGNSWCGETC*RRGRRASRNWK Trigger: TTTCCAATTTCTCGATGCCCTCCTTCCCCGGCGGCAGCATGTTTCGCCGCACCAAGAGTTGCCGTACCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS GCA 72 bp | TTTCACCGGGAGGTTTCTTGGCCTTGGAGGTGCTGCTaGGACCCTCAGATGTGTCGTCTTGCTCCGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: FHREVSWPWRCC*DPQMCRLAPEC Trigger: ACACTCCGGAGCAAGACGACACATCTGAGGGTCGCAGCAGCACCTCCAAGGCCAAGAAACCTCCCGGTGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS GCA 72 bp | AGTCACTTTCACCGGGAGGTTTCTTGGCCTTGGAGGTaGTGCTGCGACCCTCAGATGTGTCGTCTTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SHFHREVSWPWR*CCDPQMCRLAP Trigger: CGGAGCAAGACGACACATCTGAGGGTCGCAGCAGCACCTCCAAGGCCAAGAAACCTCCCGGTGAAAGTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS GCA 72 bp | GCACCACCTGCCCCAAGCCGGACCAGGGGGTTGGTCTaGAAGAGGCTAGATATTAGAAGCTGTGCATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: APPAPSRTRGLV*KRLDIRSCASV Trigger: CACAGATGCACAGCTTCTAATATCTAGCCTCTTGCAGACCAACCCCCTGGTCCGGCTTGGGGCAGGTGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | AGCCCTGTCCAGTCCAGGTCTCGGAAGAAACTATGCTaGTTCACCTCAAAAGCACCACCTGCCCCAAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SPVQSRSRKKLC*FTSKAPPAPSR Trigger: CCGGCTTGGGGCAGGTGGTGCTTTTGAGGTGAAGCAGCATAGTTTCTTCCGAGACCTGGACTGGACAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | TTCGGAAATCAGGGTGTCCCACTTCCAGGCTGTGTTTaGGCAGTGCGCCCTTCTTGTCTGCTCCCAGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: FGNQGVPLPGCV*AVRPSCLLPAK Trigger: CTTCGCTGGGAGCAGACAAGAAGGGCGCACTGCGCAAACACAGCCTGGAAGTGGGACACCCTGATTTCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | GTATACAGGCATCTGTACAGCACAGCACCGAAAGCCTaGTCCGCTATGGACCTAGAGATGCAGGGCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: VYRHLYSTAPKA*SAMDLEMQGRG Trigger: CCCCCTGCCCTGCATCTCTAGGTCCATAGCGGAGCAGGCTTTCGGTGCTGTGCTGTACAGATGCCTGTATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119820.2 |
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| CDS CCA 72 bp | TCCCTGCCCCTTGGGGCATCAGGCATCAGAGGCATCTaGGCTACAGGTTCCTTCAATCCCTTGGAGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SLPLGASGIRGI*ATGSFNPLESV Trigger: CACAGACTCCAAGGGATTGAAGGAACCTGTAGCCCAGATGCCTCTGATGCCTGATGCCCCAAGGGGCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | GTGGGACTGAAGGAGCTGCACTGCGGGGTACATTCTTaGTTGGGACTAGGGTTGGAGTCTGGGGGTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VGLKELHCGVHS*LGLGLESGGQE Trigger: CTCCTGACCCCCAGACTCCAACCCTAGTCCCAACAAAGAATGTACCCCGCAGTGCAGCTCCTTCAGTCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | CCGAAAGCCTGCTCCGCTATGGACCTAGAGATGCAGGGCAGGGGGTaGGTCTGCAAGAGGCTAGATATTAGAAGCTGTGCATCTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PKACSAMDLEMQGRG*VCKRLDIRSCASVG Trigger: GCCCACAGATGCACAGCTTCTAATATCTAGCCTCTTGCAGACCAACCCCCTGCCCTGCATCTCTAGGTCCATAGCGGAGCAGGCTTTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119820.2 |
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| CDS CCA 72 bp | TCAGACTCAGCGAGGCTATGCAGGGCCAGCTCACCATaGAAGTCCTTTCGGAAATCAGGGTGTCCCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: SDSARLCRASSP*KSFRKSGCPTS Trigger: GGAAGTGGGACACCCTGATTTCCGAAAGGACTTCCATGGTGAGCTGGCCCTGCATAGCCTCGCTGAGTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | TTTCGGAAATCAGGGTGTCCCACTTCCAGGCTGTGTTaGCGCAGTGCGCCCTTCTTGTCTGCTCCCAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: FRKSGCPTSRLC*RSAPFLSAPSE Trigger: TTCGCTGGGAGCAGACAAGAAGGGCGCACTGCGCAAACACAGCCTGGAAGTGGGACACCCTGATTTCCGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | GGACTGAAGGAGCTGCACTGCGGGGTACATTCTTTGTaGGGACTAGGGTTGGAGTCTGGGGGTCAGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GLKELHCGVHSL*GLGLESGGQER Trigger: TCTCTCCTGACCCCCAGACTCCAACCCTAGTCCCAACAAAGAATGTACCCCGCAGTGCAGCTCCTTCAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 72 bp | ACTGGCCTCTCCTTCCAGAAAACTGGCTTCAGACGCTaGGAAGCGCTTAATCTCTGGAGAGCCCCCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TGLSFQKTGFRR*EALNLWRAPSP Trigger: TGGAGAGGGGGCTCTCCAGAGATTAAGCGCTTCTCAGCGTCTGAAGCCAGTTTTCTGGAAGGAGAGGCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS TCA 72 bp | ACGGATGGCTCGCAGTGTGAACCCATATTTCTTGCCTaGGCGTTGGATGGTGATGGGGGAACGGAGTCCACT | + |
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Preference number: 6 (lower is better) Translates to: TDGSQCEPIFLA*ALDGDGGTEST Trigger: AGTGGACTCCGTTCCCCCATCACCATCCAACGCTCAGGCAAGAAATATGGGTTCACACTGCGAGCCATCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | AGTAGCCCTGTCCAGTCCAGGTCTCGGAAGAAACTATaGTGCTTCACCTCAAAAGCACCACCTGCCCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSPVQSRSRKKL*CFTSKAPPAPS Trigger: GCTTGGGGCAGGTGGTGCTTTTGAGGTGAAGCAGCATAGTTTCTTCCGAGACCTGGACTGGACAGGGCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | GCCTTTTGTTCCTTCGGGCCATTTTGGCTTTGTAACTaGTGCGCCTGGCAGGCCCAATCCGGATGGAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: AFCSFGPFWLCN*CAWQAQSGWKC Trigger: ACACTTCCATCCGGATTGGGCCTGCCAGGCGCAGCAGTTACAAAGCCAAAATGGCCCGAAGGAACAAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | GAGGACAGCGATCGACTGGTGTGCAGCAGGTTCGACTaGTTTGTGATCTTCCGAAAGAGAGAGCTCCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: EDSDRLVCSRFD*FVIFRKRELRF Trigger: GAAGCGGAGCTCTCTCTTTCGGAAGATCACAAAGCAGTCGAACCTGCTGCACACCAGTCGATCGCTGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | ATAGGAGGCGTCTCACCATCAGACTCAGCGAGGCTATaGAGGGCCAGCTCACCATGGAAGTCCTTTCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: IGGVSPSDSARL*RASSPWKSFRK Trigger: TTTCCGAAAGGACTTCCATGGTGAGCTGGCCCTGCATAGCCTCGCTGAGTCTGATGGTGAGACGCCTCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 72 bp | ATCTTCCGAAAGAGAGAGCTCCGCTTCTTGCTCTCCTaGCCGTCTTTGGCCGAAGGCCTTTTGTTCCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: IFRKRELRFLLS*PSLAEGLLFLR Trigger: CCGAAGGAACAAAAGGCCTTCGGCCAAAGACGGCCAGGAGAGCAAGAAGCGGAGCTCTCTCTTTCGGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | GTCGGAGAAGTGCTTGTCAGGATGAGGCTTTTCCGGTaGCTGGTACGGCAACTCTTGGTGCGGCGAAACATG | + |
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Preference number: 6 (lower is better) Translates to: VGEVLVRMRLFR*LVRQLLVRRNM Trigger: CATGTTTCGCCGCACCAAGAGTTGCCGTACCAGCAACCGGAAAAGCCTCATCCTGACAAGCACTTCTCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS CAA 72 bp | GTGTCAAAGTCACTTTCACCGGGAGGTTTCTTGGCCTaGGAGGTGCTGCTGCGACCCTCAGATGTGTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: VSKSLSPGGFLA*EVLLRPSDVSS Trigger: AGACGACACATCTGAGGGTCGCAGCAGCACCTCCAAGGCCAAGAAACCTCCCGGTGAAAGTGACTTTGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS CAA 90 bp | AGCTTGATAGTGTCAAAGTCACTTTCACCGGGAGGTTTCTTGGCCTaGGAGGTGCTGCTGCGACCCTCAGATGTGTCGTCTTGCTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: SLIVSKSLSPGGFLA*EVLLRPSDVSSCSG Trigger: TCCGGAGCAAGACGACACATCTGAGGGTCGCAGCAGCACCTCCAAGGCCAAGAAACCTCCCGGTGAAAGTGACTTTGACACTATCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS TCA 72 bp | GCGATCGACTGGTGTGCAGCAGGTTCGACTGCTTTGTaGTCTTCCGAAAGAGAGAGCTCCGCTTCTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AIDWCAAGSTAL*SSERESSASCS Trigger: AGAGCAAGAAGCGGAGCTCTCTCTTTCGGAAGATCACAAAGCAGTCGAACCTGCTGCACACCAGTCGATCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CCA 72 bp | TGTCAAAGTCACTTTCACCGGGAGGTTTCTTGGCCTTaGAGGTGCTGCTGCGACCCTCAGATGTGTCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: CQSHFHREVSWP*RCCCDPQMCRL Trigger: AAGACGACACATCTGAGGGTCGCAGCAGCACCTCCAAGGCCAAGAAACCTCCCGGTGAAAGTGACTTTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS CCA 72 bp | AGGAGAATTGGCGGATCTCCACGGGCTCCTCTTCGGTaGTGTCGTCCTCATCATAGGAGTTCACATGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: RRIGGSPRAPLR*CRPHHRSSHGD Trigger: ATCACCATGTGAACTCCTATGATGAGGACGACACCACCGAAGAGGAGCCCGTGGAGATCCGCCAATTCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | ACTGACAAGGCTGTAGCTGAAGCCGACTTGATAACTTaGCCCCCAGTTCGAGACGGTCGCTTCTCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: TDKAVAEADLIT*PPVRDGRFSTA Trigger: TGCTGTGGAGAAGCGACCGTCTCGAACTGGGGGCAAAGTTATCAAGTCGGCTTCAGCTACAGCCTTGTCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | TGCTTTGTGATCTTCCGAAAGAGAGAGCTCCGCTTCTaGCTCTCCTGGCCGTCTTTGGCCGAAGGCCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CFVIFRKRELRF*LSWPSLAEGLL Trigger: CAAAAGGCCTTCGGCCAAAGACGGCCAGGAGAGCAAGAAGCGGAGCTCTCTCTTTCGGAAGATCACAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | GGAATCATGACTGACAAGGCTGTAGCTGAAGCCGACTTGATAACTTaGCCCCCAGTTCGAGACGGTCGCTTCTCCACAGCAAGATCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GIMTDKAVAEADLIT*PPVRDGRFSTARSP Trigger: TGGGGATCTTGCTGTGGAGAAGCGACCGTCTCGAACTGGGGGCAAAGTTATCAAGTCGGCTTCAGCTACAGCCTTGTCAGTCATGATTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 90 bp | TCCACTGCAGGAATCATGACTGACAAGGCTGTAGCTGAAGCCGACTaGATAACTTTGCCCCCAGTTCGAGACGGTCGCTTCTCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: STAGIMTDKAVAEAD*ITLPPVRDGRFSTA Trigger: TGCTGTGGAGAAGCGACCGTCTCGAACTGGGGGCAAAGTTATCAAGTCGGCTTCAGCTACAGCCTTGTCAGTCATGATTCCTGCAGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | AAGGACCGGTTCAAAGAGGACAGCGATCGACTGGTGTaGAGCAGGTTCGACTGCTTTGTGATCTTCCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KDRFKEDSDRLV*SRFDCFVIFRK Trigger: CTTTCGGAAGATCACAAAGCAGTCGAACCTGCTGCACACCAGTCGATCGCTGTCCTCTTTGAACCGGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS CAA 72 bp | TTGATAGTGTCAAAGTCACTTTCACCGGGAGGTTTCTaGGCCTTGGAGGTGCTGCTGCGACCCTCAGATGTG | + |
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Preference number: 6 (lower is better) Translates to: LIVSKSLSPGGF*ALEVLLRPSDV Trigger: CACATCTGAGGGTCGCAGCAGCACCTCCAAGGCCAAGAAACCTCCCGGTGAAAGTGACTTTGACACTATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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| CDS CAA 72 bp | GGAATCATGACTGACAAGGCTGTAGCTGAAGCCGACTaGATAACTTTGCCCCCAGTTCGAGACGGTCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GIMTDKAVAEAD*ITLPPVRDGRF Trigger: GAAGCGACCGTCTCGAACTGGGGGCAAAGTTATCAAGTCGGCTTCAGCTACAGCCTTGTCAGTCATGATTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | TTTTGTTCCTTCGGGCCATTTTGGCTTTGTAACTGCTaGGCCTGGCAGGCCCAATCCGGATGGAAGTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: FCSFGPFWLCNC*AWQAQSGWKCF Trigger: AAAACACTTCCATCCGGATTGGGCCTGCCAGGCGCAGCAGTTACAAAGCCAAAATGGCCCGAAGGAACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109741.9 |
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| CDS GCA 72 bp | CTCTTCTGGGTTGAATTCCAGGCACTCCAGAAGCCTTaGAGGGCGAGAGATGATTATGAGAAGTTTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: LFWVEFQALQKP*RARDDYEKFLH Trigger: GTGAAGAAACTTCTCATAATCATCTCTCGCCCTGCAAGGCTTCTGGAGTGCCTGGAATTCAACCCAGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109741.9 ENSMUST00000119820.2 |
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