Pregenerated sensors for MASP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022887Ensembl transcript IDs: ENSMUST00000089883.7, ENSMUST00000229619.2, ENSMUST00000230040.2
Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGGAGCCTGCCAGGGCCTGCCTTCTaGTGCCCATGCTTAGAGGCGAGAAGGGGGATGGGGCTCAGGAAA | + |
Preference number: 1 (lower is better) Translates to: ERERERERSLPGPAF*CPCLEARRGMGLRK Trigger: TTTCCTGAGCCCCATCCCCCTTCTCGCCTCTAAGCATGGGCAGCAGAAGGCAGGCCCTGGCAGGCTCCTCTCTCTCTCTCTCTCTCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGCCTGCCAGGGCCTaGCTTCTGCTGCCCATGCTTAGAGGCGAGAAGGGGGATGGGGCT | + |
Preference number: 1 (lower is better) Translates to: REREREREREEPARA*LLLPMLRGEKGDGA Trigger: AGCCCCATCCCCCTTCTCGCCTCTAAGCATGGGCAGCAGAAGGCAGGCCCTGGCAGGCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR GCA 90 bp | CTGCAGCAGGCCACAGCAGCAGTCACTATGACCTGTATAACAGACTaGTCAGCAAGAGCTGTGGAGGGGCAGGCGCATTGCCTCCAAGCA | + |
Preference number: 1 (lower is better) Translates to: LQQATAAVTMTCITD*SARAVEGQAHCLQA Trigger: TGCTTGGAGGCAATGCGCCTGCCCCTCCACAGCTCTTGCTGAGCAGTCTGTTATACAGGTCATAGTGACTGCTGCTGTGGCCTGCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 90 bp | TGCCCTCTGGTATTTGAGTGGCACATGGGCCCGATGTGTTCGGAGTaGACAGCAGTGTTTCAGGGCTTGGGAGAGCTGCAGTTGGTCTTC | + |
Preference number: 1 (lower is better) Translates to: CPLVFEWHMGPMCSE*TAVFQGLGELQLVF Trigger: GAAGACCAACTGCAGCTCTCCCAAGCCCTGAAACACTGCTGTCCACTCCGAACACATCGGGCCCATGTGCCACTCAAATACCAGAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 90 bp | GGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGGTATTTGAGTaGCACATGGGCCCGATGTGTTCGGAGTGGACAGCAGTGTTTCAG | + |
Preference number: 1 (lower is better) Translates to: GVAGVDTSWCPLVFE*HMGPMCSEWTAVFQ Trigger: CTGAAACACTGCTGTCCACTCCGAACACATCGGGCCCATGTGCCACTCAAATACCAGAGGGCACCATGAGGTGTCAACACCTGCCACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 90 bp | GTTCGGAGTGGACAGCAGTGTTTCAGGGCTTGGGAGAGCTGCAGTTaGTCTTCTCCTTCAGGTAGCAGAGCCATCGTGGTATCTTTCGGT | + |
Preference number: 1 (lower is better) Translates to: VRSGQQCFRAWESCS*SSPSGSRAIVVSFG Trigger: ACCGAAAGATACCACGATGGCTCTGCTACCTGAAGGAGAAGACCAACTGCAGCTCTCCCAAGCCCTGAAACACTGCTGTCCACTCCGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 90 bp | CTGAGCCTGGTTTGGGCTTTTGAAAACCTCAAAGCCCACTTCCAGTaGCACATTTCCTCCACAAGGCCACTCCACTCCTGTACGGTGACA | + |
Preference number: 1 (lower is better) Translates to: LSLVWAFENLKAHFQ*HISSTRPLHSCTVT Trigger: TGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTGGGCTTTGAGGTTTTCAAAAGCCCAAACCAGGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 90 bp | AGACCAGGGAAAGGTGGTTCAACGAATCCCAGTATCACCCAGGAATaGGCAGTGAAGACTGAGGACCAGGGAGGAAAGGTTGCTTGCATT | + |
Preference number: 1 (lower is better) Translates to: RPGKGGSTNPSITQE*AVKTEDQGGKVACI Trigger: AATGCAAGCAACCTTTCCTCCCTGGTCCTCAGTCTTCACTGCTCATTCCTGGGTGATACTGGGATTCGTTGAACCACCTTTCCCTGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 90 bp | GACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTTTGAGTaGTGGAGCCTGGATCCAGCCTGGCTGGCTTTGCTACTCTGCCTC | + |
Preference number: 1 (lower is better) Translates to: DPKRQSAVHHYKNFE*WSLDPAWLALLLCL Trigger: GAGGCAGAGTAGCAAAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 90 bp | AAGTCACATGTGTGTCACAGTTCCACCAGGAATGTCTGGAAGCCATaGCCCATATGTTTCTCACTGCAGCAGGCCACAGCAGCAGTCACT | + |
Preference number: 1 (lower is better) Translates to: KSHVCHSSTRNVWKP*PICFSLQQATAAVT Trigger: AGTGACTGCTGCTGTGGCCTGCTGCAGTGAGAAACATATGGGTCATGGCTTCCAGACATTCCTGGTGGAACTGTGACACACATGTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 90 bp | CCTGGCTGGCTTTGCTACTCTGCCTCTATAAAGACCAGGGAAAGGTaGTTCAACGAATCCCAGTATCACCCAGGAATGAGCAGTGAAGAC | + |
Preference number: 1 (lower is better) Translates to: PGWLCYSASIKTRER*FNESQYHPGMSSED Trigger: GTCTTCACTGCTCATTCCTGGGTGATACTGGGATTCGTTGAACCACCTTTCCCTGGTCTTTATAGAGGCAGAGTAGCAAAGCCAGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 90 bp | AACAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTTTaGGTGATGGAGCCTGGATCCAGCCTGGCTGGCTTTGCTACTCTG | + |
Preference number: 1 (lower is better) Translates to: NRPKEAVSCPSLQKF*VMEPGSSLAGFATL Trigger: CAGAGTAGCAAAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 90 bp | GGGAGTTGGGGCTATCTCAGGAGCATGAGTGTGCTGCAGTTTATTTaGTCTGGTAAGAATCATGGACTATGCTGTTGGCAGTGTGTGGTG | + |
Preference number: 1 (lower is better) Translates to: GSWGYLRSMSVLQFI*SGKNHGLCCWQCVV Trigger: CACCACACACTGCCAACAGCATAGTCCATGATTCTTACCAGATCAAATAAACTGCAGCACACTCATGCTCCTGAGATAGCCCCAACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 90 bp | GGCAGTCAGCTGTCCATCATTACAAAAATTTTGAGTGATGGAGCCTaGATCCAGCCTGGCTGGCTTTGCTACTCTGCCTCTATAAAGACC | + |
Preference number: 1 (lower is better) Translates to: GSQLSIITKILSDGA*IQPGWLCYSASIKT Trigger: GGTCTTTATAGAGGCAGAGTAGCAAAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR GCA 90 bp | ACAAAAATTTTGAGTGATGGAGCCTGGATCCAGCCTGGCTGGCTTTaGTACTCTGCCTCTATAAAGACCAGGGAAAGGTGGTTCAACGAA | + |
Preference number: 1 (lower is better) Translates to: TKILSDGAWIQPGWL*YSASIKTRERWFNE Trigger: TTCGTTGAACCACCTTTCCCTGGTCTTTATAGAGGCAGAGTAGCAAAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAAAATTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 90 bp | TTTTATCATGGCAAGAGCATGGTGGCATGCAGGCAAACATGGTGCTaGAGAATTGGCCAAAACTCCTACATCTTTATCCACAGGCAGCAG | + |
Preference number: 1 (lower is better) Translates to: FYHGKSMVACRQTWC*RIGQNSYIFIHRQQ Trigger: CTGCTGCCTGTGGATAAAGATGTAGGAGTTTTGGCCAATTCTCCAGCACCATGTTTGCCTGCATGCCACCATGCTCTTGCCATGATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 90 bp | TTGGTACTTAGCTCAAGTGCCGAACGACATTGCTGGCTGTGTAACTaGGGTCACGTCATAGGGCTGAGAATTGTATTTTGTTTGCATTTT | + |
Preference number: 1 (lower is better) Translates to: LVLSSSAERHCWLCN*GHVIGLRIVFCLHF Trigger: AAAATGCAAACAAAATACAATTCTCAGCCCTATGACGTGACCCCAGTTACACAGCCAGCAATGTCGTTCGGCACTTGAGCTAAGTACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 90 bp | TTGGTTCTCATGTTGAATGCTGGTTTTCTGGAAATATCATTACTATaGGAGGGGCTGGTGGTATCTGAGTGGATGCAGACTCCTGTTTTT | + |
Preference number: 1 (lower is better) Translates to: LVLMLNAGFLEISLL*EGLVVSEWMQTPVF Trigger: AAAAACAGGAGTCTGCATCCACTCAGATACCACCAGCCCCTCCCATAGTAATGATATTTCCAGAAAACCAGCATTCAACATGAGAACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 90 bp | AGTAAAGAACCTCAGATAACAGAACTTCATCCCAAAAAGTGTGGCTaGGACATACACTTTCTGAATATGAAAACATCCAGACTCGCCCAC | + |
Preference number: 1 (lower is better) Translates to: SKEPQITELHPKKCG*DIHFLNMKTSRLAH Trigger: GTGGGCGAGTCTGGATGTTTTCATATTCAGAAAGTGTATGTCCCAGCCACACTTTTTGGGATGAAGTTCTGTTATCTGAGGTTCTTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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3UTR-3UTR GCA 90 bp | AGGAGCCTGCCAGGGCCTGCCTTCTGCTGCCCATGCTTAGAGGCGAGAAGGGGGCTGGCTTTGCTACTCTaGCTCTATAAAGACCAGGGA | + |
Preference number: 2 (lower is better) Translates to: RSLPGPAFCCPCLEARRGLALLL*LYKDQG Trigger: TCCCTGGTCTTTATAGAGGCAGAGTAGCAAAGCCAG...CCCCCTTCTCGCCTCTAAGCATGGGCAGCAGAAGGCAGGCCCTGGCAGGCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR GCA 90 bp | CGACAGGAATCAGAGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGGAGCCTGCCAGGGCCTaGCTTCTGCTGCCCATGCTT | + |
Preference number: 2 (lower is better) Translates to: RQESEKWQPKLSWDAESGEPARA*LLLPML Trigger: AAGCATGGGCAGCAGAAGGCAGGCCCTGGCAGGCTC...CCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCTCTGATTCCTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | AGTCTCCATACACGTGGCTGGGGGCAGGTCACTTTCCAGAGCTGGAGGGCTGCTTGGTGTAACCTCACTTaGACTGGGGCAGGGAAGTAC | + |
Preference number: 2 (lower is better) Translates to: SLHTRGWGQVTFQSWRAAWCNLT*TGAGKY Trigger: GTACTTCCCTGCCCCAGTTCAAGTGAGGTTACACCA...AGCAGCCCTCCAGCTCTGGAAAGTGACCTGCCCCCAGCCACGTGTATGGAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR GCA 90 bp | CGACAGGAATCAGAGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGGGGCCTGCCTTCTGCTaGCCATGCTTAGAGGCGAGA | + |
Preference number: 2 (lower is better) Translates to: RQESEKWQPKLSWDAESGGPAFC*PCLEAR Trigger: TCTCGCCTCTAAGCATGGGCAGCAGAAGGCAGGCCC...CCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCTCTGATTCCTGTCG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CCA 90 bp | TGGGGGCAGGTCACTTTCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTGCTCGGGCTCTGCTCTTaGTCCCCCAAACCTGAATTG | + |
Preference number: 2 (lower is better) Translates to: WGQVTFQSWRAALCLCGVLGLCS*SPKPEL Trigger: CAATTCAGGTTTGGGGGACCAAGAGCAGAGCCCGAG...CACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGAAAGTGACCTGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CCA 90 bp | GCACTGGTCAGACCCTATGGGACCTTCCAGATGAGGAGACTGAAGCTCACAGGAAGGCTCCAAGCCTTCTaGAAACTCCGCCCCTACTGG | + |
Preference number: 2 (lower is better) Translates to: ALVRPYGTFQMRRLKLTGRLQAF*KLRPYW Trigger: CCAGTAGGGGCGGAGTTTCCAGAAGGCTTGGAGCCT...TCCTGTGAGCTTCAGTCTCCTCATCTGGAAGGTCCCATAGGGTCTGACCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CCA 90 bp | GCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGCCGATGTGTTCGGAGTaGACAGCAGTGTTTCAGGGC | + |
Preference number: 2 (lower is better) Translates to: AALCLCGVAGVDTSWCPLPMCSE*TAVFQG Trigger: GCCCTGAAACACTGCTGTCCACTCCGAACACATCGG...CAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACAAACACAGAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CCA 90 bp | GAAGATGGAGCTAGGGACAGAACCCAGGACTCATGGCTCTCTGTCTCTTTCCAACACAGTGGGGCACAGTaGGGCACAGTGGGGCACAGT | + |
Preference number: 2 (lower is better) Translates to: EDGARDRTQDSWLSVSFQHSGAQ*GTVGHS Trigger: ACTGTGCCCCACTGTGCCCCACTGTGCCCCACTGTG...TTGGAAAGAGACAGAGAGCCATGAGTCCTGGGTTCTGTCCCTAGCTCCATCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR TCA 90 bp | AGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGATGCGGAGAGCGAATGAGCAGTGAAGACTaGGGACCAGGGAGGAAAGGT | + |
Preference number: 2 (lower is better) Translates to: RNGNLSSAGMQRAGCGERMSSED*GPGRKG Trigger: ACCTTTCCTCCCTGGTCCTCAGTCTTCACTGCTCAT...TCGCTCTCCGCATCCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | GGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGATGCGGAGAGCGAGAAGGAATCTTTGGCTGCACTTaGGTATGGTGGATCACTGTG | + |
Preference number: 2 (lower is better) Translates to: GNLSSAGMQRAGCGEREGIFGCT*VWWITV Trigger: CACAGTGATCCACCATACTCAAGTGCAGCCAAAGAT...TCCTTCTCGCTCTCCGCATCCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR GCA 90 bp | TGGGCTTTTGAAAACCTCAAAGCCCACTTCCAGTGGCACATTTCCTCCACAAGGCCAGGGCCTGCCTTCTaGTGCCCATGCTTAGAGGCG | + |
Preference number: 2 (lower is better) Translates to: WAFENLKAHFQWHISSTRPGPAF*CPCLEA Trigger: CGCCTCTAAGCATGGGCAGCAGAAGGCAGGCCCTGG...CCTTGTGGAGGAAATGTGCCACTGGAAGTGGGCTTTGAGGTTTTCAAAAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR GCA 90 bp | GGCTCCAAGCCTTCTGGAAACTCCGCCCCTACTGGAGAGGAGAGGCTCAGAGAGCCTAGAGATTTCCCCTaGATATTGCTAACCCCAGTC | + |
Preference number: 2 (lower is better) Translates to: GSKPSGNSAPTGEERLREPRDFP*ILLTPV Trigger: GACTGGGGTTAGCAATATGCAGGGGAAATCTCTAGG...CTCTCTGAGCCTCTCCTCTCCAGTAGGGGCGGAGTTTCCAGAAGGCTTGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR GCA 90 bp | TGGGGGCAGGTCACTTTCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTGGTTGACACCTCATGGTaGCCTCTGGTATTTGAGTGG | + |
Preference number: 2 (lower is better) Translates to: WGQVTFQSWRAALCLCGVVDTSW*PLVFEW Trigger: CCACTCAAATACCAGAGGGCACCATGAGGTGTCAAC...CACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGAAAGTGACCTGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CCA 90 bp | GCACTGGTCAGACCCTATGGGACCTTCCAGATGAGGAGACTGAAGCTCACAGGAAAACTCCGCCCCTACTaGAGAGGAGAGGCTCAGAGA | + |
Preference number: 2 (lower is better) Translates to: ALVRPYGTFQMRRLKLTGKLRPY*RGEAQR Trigger: TCTCTGAGCCTCTCCTCTCCAGTAGGGGCGGAGTTT...TCCTGTGAGCTTCAGTCTCCTCATCTGGAAGGTCCCATAGGGTCTGACCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CAA 90 bp | CTCAGAGGGGTAGTGGGGCAAAGTGTTGTCCCTGAGTGTGGAGCCTaGGGCTTAATACCCACAAGCCCTCATTCCTCACTGTCTACCTCA | + |
Preference number: 2 (lower is better) Translates to: LRGVVGQSVVPECGA*GLIPTSPHSSLSTS Trigger: TGAGGTAGACAGTGAGGAATGAGGGCTTGTGGGTATTAAGCCCAAGGCTCCACACTCAGGGACAACACTTTGCCCCACTACCCCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | ATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCAGGCAGGGCAGTGCCCATTaGGAGCACTGGTCAGACCCT | + |
Preference number: 2 (lower is better) Translates to: IGVCFDDSSQFPPHSLSRQGSAH*EHWSDP Trigger: AGGGTCTGACCAGTGCTCTCAATGGGCACTGCCCTG...CCTGGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR GCA 90 bp | TGGGCTTTTGAAAACCTCAAAGCCCACTTCCAGTGGCACATTTCCTCCACAAGGAGAGAGAGAGGAGCCTaGCAGGGCCTGCCTTCTGCT | + |
Preference number: 2 (lower is better) Translates to: WAFENLKAHFQWHISSTRRERGA*QGLPSA Trigger: AGCAGAAGGCAGGCCCTGGCAGGCTCCTCTCTCTCT...CCTTGTGGAGGAAATGTGCCACTGGAAGTGGGCTTTGAGGTTTTCAAAAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CCA 90 bp | AGCCCCAGCAGTAAAGAACCTCAGATAACAGAACTTCATCCCAAAAAGTGTGGCTGGGCAATGGAGTGTTaGTGGGTGGGGCGGGGTGGG | + |
Preference number: 2 (lower is better) Translates to: SPSSKEPQITELHPKKCGWAMEC*WVGRGG Trigger: CCCACCCCGCCCCACCCACCAACACTCCATTGCCCA...GCCACACTTTTTGGGATGAAGTTCTGTTATCTGAGGTTCTTTACTGCTGGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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3UTR-3UTR TCA 90 bp | AGTCTCCATACACGTGGCTGGGGGCAGGTCACTTTCCAGAGCTGGAGGGCTGCTGATGCAGACTTTAGCTaGAGGAATCCTTTCCTAATG | + |
Preference number: 2 (lower is better) Translates to: SLHTRGWGQVTFQSWRAADADFS*RNPFLM Trigger: CATTAGGAAAGGATTCCTTCAGCTAAAGTCTGCATC...AGCAGCCCTCCAGCTCTGGAAAGTGACCTGCCCCCAGCCACGTGTATGGAGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR TCA 90 bp | GCAGGCCACAGCAGCAGTCACTATGACCTGTATAACAGACTGCTCAGCAAGAGCAGTATCACCCAGGAATaGGCAGTGAAGACTGAGGAC | + |
Preference number: 2 (lower is better) Translates to: AGHSSSHYDLYNRLLSKSSITQE*AVKTED Trigger: GTCCTCAGTCTTCACTGCTCATTCCTGGGTGATACT...GCTCTTGCTGAGCAGTCTGTTATACAGGTCATAGTGACTGCTGCTGTGGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR GCA 90 bp | CACTTCCAGTGGCACATTTCCTCCACAAGGCCACTCCACTCCTGTACGGTGACAACCTGTATAACAGACTaGTCAGCAAGAGCTGTGGAG | + |
Preference number: 2 (lower is better) Translates to: HFQWHISSTRPLHSCTVTTCITD*SARAVE Trigger: CTCCACAGCTCTTGCTGAGCAGTCTGTTATACAGGT...TGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR GCA 90 bp | TGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGGTATTTGAGTGGCTGGACTGTACTCTCTTaGCTAGAGATTTCCCCTGCA | + |
Preference number: 2 (lower is better) Translates to: CVEWQVLTPHGALWYLSGWTVLS*LEISPA Trigger: TGCAGGGGAAATCTCTAGGCAAGAGAGTACAGTCCA...GCCACTCAAATACCAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CCA 90 bp | GGAGAATTGGCCAAAACTCCTACATCTTTATCCACAGGCAGCAGGAAGAGAGCCTTGAGTGATGGAGCCTaGATCCAGCCTGGCTGGCTT | + |
Preference number: 2 (lower is better) Translates to: GELAKTPTSLSTGSRKRALSDGA*IQPGWL Trigger: AAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAA...GGCTCTCTTCCTGCTGCCTGTGGATAAAGATGTAGGAGTTTTGGCCAATTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CCA 90 bp | AGAATAAATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTGCTCAGCAAGAGCTGTaGAGGGGCAGGCGCATTGCC | + |
Preference number: 2 (lower is better) Translates to: RINCAQPEVGICMGNLKLAQQEL*RGRRIA Trigger: GGCAATGCGCCTGCCCCTCCACAGCTCTTGCTGAGC...AAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATTTATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CCA 90 bp | AGCCCCAGCAGTAAAGAACCTCAGATAACAGAACTTCATCCCAAAAAGTGTGGCGGGGTGGGGTGGCTCTaGAAGGGATTGGGTTCTCTG | + |
Preference number: 2 (lower is better) Translates to: SPSSKEPQITELHPKKCGGVGWL*KGLGSL Trigger: CAGAGAACCCAATCCCTTCCAGAGCCACCCCACCCC...GCCACACTTTTTGGGATGAAGTTCTGTTATCTGAGGTTCTTTACTGCTGGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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3UTR-3UTR CCA 90 bp | TTTCTGATGGAGATCCCTGGGATAGCGAGCACTCAGCCTGTGAGAGCTACAGATCACAGTGGGGCACAGTaGGGCAGTCTTCTCTTTCTT | + |
Preference number: 2 (lower is better) Translates to: FLMEIPGIASTQPVRATDHSGAQ*GSLLFL Trigger: AAGAAAGAGAAGACTGCCCCACTGTGCCCCACTGTG...ATCTGTAGCTCTCACAGGCTGAGTGCTCGCTATCCCAGGGATCTCCATCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CAA 90 bp | CCAGGACTCATGGCTCTCTGTCTCTTTCCAATGAGACTCTGTCCCTaGACCTTGACTCCCAGAACAGCAAGGGATAGATGGGTTGGAGTA | + |
Preference number: 2 (lower is better) Translates to: PGLMALCLFPMRLCP*TLTPRTARDRWVGV Trigger: TACTCCAACCCATCTATCCCTTGCTGTTCTGGGAGTCAAGGTCAAGGGACAGAGTCTCATTGGAAAGAGACAGAGAGCCATGAGTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR TCA 90 bp | GCACTGGTCAGACCCTATGGGACCTTCCAGATGAGGAGACTGAAGCTCACAGGACACGGCCTTGAAAAGTaGTTAGGAGTGATTGACACT | + |
Preference number: 2 (lower is better) Translates to: ALVRPYGTFQMRRLKLTGHGLEK*LGVIDT Trigger: AGTGTCAATCACTCCTAATCACTTTTCAAGGCCGTG...TCCTGTGAGCTTCAGTCTCCTCATCTGGAAGGTCCCATAGGGTCTGACCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR GCA 90 bp | GCAGGCCACAGCAGCAGTCACTATGACCTGTATAACAGACTGCTCAGCAAGAGCCCAGGGAGGAAAGGTTaGTTGCATTCACTGATCTTC | + |
Preference number: 2 (lower is better) Translates to: AGHSSSHYDLYNRLLSKSPGRKG*LHSLIF Trigger: GAAGATCAGTGAATGCAAGCAACCTTTCCTCCCTGG...GCTCTTGCTGAGCAGTCTGTTATACAGGTCATAGTGACTGCTGCTGTGGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR-3UTR CCA 90 bp | CACTTCCAGTGGCACATTTCCTCCACAAGGCCACTCCACTCCTGTACGGTGACAAAGACCAGGGAAAGGTaGTTCAACGAATCCCAGTAT | + |
Preference number: 2 (lower is better) Translates to: HFQWHISSTRPLHSCTVTKTRER*FNESQY Trigger: ATACTGGGATTCGTTGAACCACCTTTCCCTGGTCTT...TGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CCA 90 bp | TGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGGTATTTGAGTGGCAGCTGGGCAAGTACATaGATGCAGACTTTAGCTGAA | + |
Preference number: 2 (lower is better) Translates to: CVEWQVLTPHGALWYLSGSWAST*MQTLAE Trigger: TTCAGCTAAAGTCTGCATCCATGTACTTGCCCAGCT...GCCACTCAAATACCAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
3UTR-3UTR CCA 90 bp | AGTCCCAGGAACAAAAGTGTTTCCAGACAGTGTTCTCTGAGGGACAGCTCGGGCTCTAGAAACTGGAGCTaGGCAAGTACATGGATGCAG | + |
Preference number: 2 (lower is better) Translates to: SPRNKSVSRQCSLRDSSGSRNWS*ASTWMQ Trigger: CTGCATCCATGTACTTGCCCAGCTCCAGTTTCTAGA...GCCCGAGCTGTCCCTCAGAGAACACTGTCTGGAAACACTTTTGTTCCTGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CCA 90 bp | ATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCAGGTGGGAGAGCTGCAGTTaGTCTTCTCCTTCAGGTAGC | + |
Preference number: 2 (lower is better) Translates to: IGVCFDDSSQFPPHSLSRWESCS*SSPSGS Trigger: GCTACCTGAAGGAGAAGACCAACTGCAGCTCTCCCA...CCTGGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CCA 90 bp | ACTCATGGCTCTCTGTCTCTTTCCAATGAGACTCTGTCCCTTGACCTTGACTCCCAGTGTTTCAGGGCTTaGGAGAGCTGCAGTTGGTCT | + |
Preference number: 2 (lower is better) Translates to: THGSLSLSNETLSLDLDSQCFRA*ESCSWS Trigger: AGACCAACTGCAGCTCTCCCAAGCCCTGAAACACTG...GGAGTCAAGGTCAAGGGACAGAGTCTCATTGGAAAGAGACAGAGAGCCATGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR TCA 90 bp | AATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTTAAAGCCCAGGAATGAGCAGTaGAGACTGAGGACCAGGGAG | + |
Preference number: 2 (lower is better) Translates to: NCAQPEVGICMGNLKLLKPRNEQ*RLRTRE Trigger: CTCCCTGGTCCTCAGTCTTCACTGCTCATTCCTGGG...CTTTAAAAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | GCAGGCCACAGCAGCAGTCACTATGACCTGTATAACAGACTGCTCAGCAAGAGCTACAAAAATTTTGAGTaGTGGAGCCTGGATCCAGCC | + |
Preference number: 2 (lower is better) Translates to: AGHSSSHYDLYNRLLSKSYKNFE*WSLDPA Trigger: GGCTGGATCCAGGCTCCATCACTCAAAATTTTTGTA...GCTCTTGCTGAGCAGTCTGTTATACAGGTCATAGTGACTGCTGCTGTGGCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | AGGGCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTGTGCTGCAGTTTATTTaGTCTGGTAAGAATCATGGA | + |
Preference number: 2 (lower is better) Translates to: RAALCLCGVAGVDTSWCPVLQFI*SGKNHG Trigger: TCCATGATTCTTACCAGATCAAATAAACTGCAGCAC...AGGGCACCATGAGGTGTCAACACCTGCCACTCCACACAAACACAGAGCAGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CCA 90 bp | CACTCCTGTACGGTGACATCTGATCTTTTCAAATATCAACACTCTCTAGTGACCAGGCGAGAAGGGGGATaGGGCTCAGGAAAGCCACTC | + |
Preference number: 2 (lower is better) Translates to: HSCTVTSDLFKYQHSLVTRREGG*GSGKPL Trigger: GAGTGGCTTTCCTGAGCCCCATCCCCCTTCTCGCCT...GGTCACTAGAGAGTGTTGATATTTGAAAAGATCAGATGTCACCGTACAGGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CAA 90 bp | GAACAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTTaGAGTGATGGAGCCTGGATCCAGCCTGGCTGGCTTTGCTACTCT | + |
Preference number: 2 (lower is better) Translates to: EQTQRGSQLSIITKI*SDGAWIQPGWLCYS Trigger: AGAGTAGCAAAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CAA 90 bp | TCAGAGAGAGGAAGAGGCTTGGTTCTAGCTTTGGACTGTACTCTCTaGCCTAGAGATTTCCCCTGCATATTGCTAACCCCAGTCTTGGGA | + |
Preference number: 2 (lower is better) Translates to: SERGRGLVLALDCTL*PRDFPCILLTPVLG Trigger: TCCCAAGACTGGGGTTAGCAATATGCAGGGGAAATCTCTAGGCAAGAGAGTACAGTCCAAAGCTAGAACCAAGCCTCTTCCTCTCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CCA 90 bp | TGGGCTTTTGAAAACCTCAAAGCCCACTTCCAGTGGCACATTTCCTCCACAAGGCAGGAATCAGAGAAATaGCAACCTAAGCTCAGCTGG | + |
Preference number: 2 (lower is better) Translates to: WAFENLKAHFQWHISSTRQESEK*QPKLSW Trigger: CCAGCTGAGCTTAGGTTGCCATTTCTCTGATTCCTG...CCTTGTGGAGGAAATGTGCCACTGGAAGTGGGCTTTGAGGTTTTCAAAAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | GCACTGGTCAGACCCTATGGGACCTTCCAGATGAGGAGACTGAAGCTCACAGGATTGCTATTTTCTAGATaGAGAACCAGGTTTAGTGCA | + |
Preference number: 2 (lower is better) Translates to: ALVRPYGTFQMRRLKLTGLLFSR*RTRFSA Trigger: TGCACTAAACCTGGTTCTTCATCTAGAAAATAGCAA...TCCTGTGAGCTTCAGTCTCCTCATCTGGAAGGTCCCATAGGGTCTGACCAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
3UTR-3UTR GCA 90 bp | CACTTTCTGAATATGAAAACATCCAGACTCGCCCACATCCACACTCTGTGTCATTCCATTCTCAGATGTTaGACTGTGTGGGGTTCCCGC | + |
Preference number: 2 (lower is better) Translates to: HFLNMKTSRLAHIHTLCHSILRC*TVWGSR Trigger: GCGGGAACCCCACACAGTGCAACATCTGAGAATGGA...ATGACACAGAGTGTGGATGTGGGCGAGTCTGGATGTTTTCATATTCAGAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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3UTR-3UTR CCA 90 bp | TGGGCTTTTGAAAACCTCAAAGCCCACTTCCAGTGGCACATTTCCTCCACAAGGGCTTCTCTTACCATTTaGTACTTAGCTCAAGTGCCG | + |
Preference number: 2 (lower is better) Translates to: WAFENLKAHFQWHISSTRASLTI*YLAQVP Trigger: CGGCACTTGAGCTAAGTACCAAATGGTAAGAGAAGC...CCTTGTGGAGGAAATGTGCCACTGGAAGTGGGCTTTGAGGTTTTCAAAAGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR GCA 90 bp | AATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTTAAAGCAGCCTGGCTGGCTTTaGTACTCTGCCTCTATAAAG | + |
Preference number: 2 (lower is better) Translates to: NCAQPEVGICMGNLKLLKQPGWL*YSASIK Trigger: CTTTATAGAGGCAGAGTAGCAAAGCCAGCCAGGCTG...CTTTAAAAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR GCA 90 bp | CACTCCTGTACGGTGACATCTGATCTTTTCAAATATCAACACTCTCTAGTGACCGAGGGGCAGGCGCATTaGCTCCAAGCAGTTTCAAAA | + |
Preference number: 2 (lower is better) Translates to: HSCTVTSDLFKYQHSLVTEGQAH*LQAVSK Trigger: TTTTGAAACTGCTTGGAGGCAATGCGCCTGCCCCTC...GGTCACTAGAGAGTGTTGATATTTGAAAAGATCAGATGTCACCGTACAGGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CCA 90 bp | CACTCCTGTACGGTGACATCTGATCTTTTCAAATATCAACACTCTCTAGTGACCTATGGGAGGGGCTGGTaGTATCTGAGTGGATGCAGA | + |
Preference number: 2 (lower is better) Translates to: HSCTVTSDLFKYQHSLVTYGRGW*YLSGCR Trigger: TCTGCATCCACTCAGATACCACCAGCCCCTCCCATA...GGTCACTAGAGAGTGTTGATATTTGAAAAGATCAGATGTCACCGTACAGGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | AATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTTAAAGGAAATGCTCACTTTCTaGAGGTCATCACCCTCTAGG | + |
Preference number: 2 (lower is better) Translates to: NCAQPEVGICMGNLKLLKEMLTF*RSSPSR Trigger: CCTAGAGGGTGATGACCTTCAGAAAGTGAGCATTTC...CTTTAAAAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR GCA 90 bp | ATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCAGGACCTGGCAAGTCTTGTaGCCATATTTTCTTCTGTTT | + |
Preference number: 2 (lower is better) Translates to: IGVCFDDSSQFPPHSLSRTWQVL*PYFLLF Trigger: AAACAGAAGAAAATATGGGCACAAGACTTGCCAGGT...CCTGGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR TCA 90 bp | TTCAAACACAGTGTTCTCAGTTTGGTGAGACAAAGCGACAGGAATCAGAGAAATCTGATCTTCTGTTGGTaGCTGACCATACAGCAGGTG | + |
Preference number: 2 (lower is better) Translates to: FKHSVLSLVRQSDRNQRNLIFCW*LTIQQV Trigger: CACCTGCTGTATGGTCAGTCACCAACAGAAGATCAG...ATTTCTCTGATTCCTGTCGCTTTGTCTCACCAAACTGAGAACACTGTGTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR GCA 90 bp | ATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCAGGAGATGGGTTGGAGTATaGTACTTGGTATATTCTCTA | + |
Preference number: 2 (lower is better) Translates to: IGVCFDDSSQFPPHSLSRRWVGV*YLVYSL Trigger: TAGAGAATATACCAAGTAGCATACTCCAACCCATCT...CCTGGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CCA 90 bp | CAAATATCAACACTCTCTAGTGACCAAGCATACAAATATGTGAGCCTGTGGGGGTTGTTTGCATTTTTATaGGGAATGGGGCTGGGCTTA | + |
Preference number: 2 (lower is better) Translates to: QISTLSSDQAYKYVSLWGLFAFL*GMGLGL Trigger: TAAGCCCAGCCCCATTCCCCATAAAAATGCAAACAA...CCCCCACAGGCTCACATATTTGTATGCTTGGTCACTAGAGAGTGTTGATATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | TCCACACTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATACACTTATAGTATGGAGTaGATCAGTTGTGATGGCCCA | + |
Preference number: 2 (lower is better) Translates to: STLCVIIQSINPWLLGTYTYSME*ISCDGP Trigger: TGGGCCATCACAACTGATTCACTCCATACTATAAGT...GTATGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAGTGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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3UTR-3UTR GCA 90 bp | ATCATGTCACAGGCATTTATAGGACAAGGTTCAAGTTCCATGGTATATTTAGTTCCATATGTTTCTCACTaGAGCAGGCCACAGCAGCAG | + |
Preference number: 2 (lower is better) Translates to: IMSQAFIGQGSSSMVYLVPYVSH*SRPQQQ Trigger: CTGCTGCTGTGGCCTGCTGCAGTGAGAAACATATGG...AACTAAATATACCATGGAACTTGAACCTTGTCCTATAAATGCCTGTGACATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CCA 90 bp | CACATCCACACTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACAAGTCATTAAGTAGTTaGCACCCTGACCCACTTAAA | + |
Preference number: 2 (lower is better) Translates to: HIHTLCHHSVYKPMVVRDKSLSS*HPDPLK Trigger: TTTAAGTGGGTCAGGGTGCCAACTACTTAATGACTT...GTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAGTGTGGATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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3UTR-3UTR TCA 90 bp | CACTCCTGTACGGTGACATCTGATCTTTTCAAATATCAACACTCTCTAGTGACCTGTTGGTTCTCATGTTaGATGCTGGTTTTCTGGAAA | + |
Preference number: 2 (lower is better) Translates to: HSCTVTSDLFKYQHSLVTCWFSC*MLVFWK Trigger: TTTCCAGAAAACCAGCATTCAACATGAGAACCAACA...GGTCACTAGAGAGTGTTGATATTTGAAAAGATCAGATGTCACCGTACAGGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | ACATCCACACTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACAGGACATATTTTCCTTTaGGAAGAGTACAGTTCACTG | + |
Preference number: 2 (lower is better) Translates to: TSTLCVIIQSINPWLLGTGHIFL*EEYSSL Trigger: CAGTGAACTGTACTCTTCTCAAAGGAAAATATGTCC...TGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAGTGTGGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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3UTR-3UTR GCA 90 bp | AATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTTAAAGGGTTCTCATGTTGAATaGTGGTTTTCTGGAAATATC | + |
Preference number: 2 (lower is better) Translates to: NCAQPEVGICMGNLKLLKGSHVE*WFSGNI Trigger: GATATTTCCAGAAAACCAGCATTCAACATGAGAACC...CTTTAAAAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | CTTCCTTCTGTGTCTCTAGTTTTAGGTGATCAGGCTTCTTGGACCATAATAGAATCATTACAAAAATTTTaGGTGATGGAGCCTGGATCC | + |
Preference number: 2 (lower is better) Translates to: LPSVSLVLGDQASWTIIESLQKF*VMEPGS Trigger: GGATCCAGGCTCCATCACTCAAAATTTTTGTAATGA...TTCTATTATGGTCCAAGAAGCCTGATCACCTAAAACTAGAGACACAGAAGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR TCA 90 bp | CTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATACACTTTCAGTAAGTTTGAATGGTaGGTAAATCGTCAGGAGAGA | + |
Preference number: 2 (lower is better) Translates to: LCVIIQSINPWLLGTYTFSKFEW*VNRQER Trigger: TCTCTCCTGACGATTTACTCACCATTCAAACTTACT...GAAAGTGTATGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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3UTR CAA 90 bp | TTGGATAAGGTTTCTAAAAACTTATTCAAACACAGTGTTCTCAGTTaGGTGAGACAAAGCGACAGGAATCAGAGAAATGGCAACCTAAGC | + |
Preference number: 2 (lower is better) Translates to: LDKVSKNLFKHSVLS*VRQSDRNQRNGNLS Trigger: GCTTAGGTTGCCATTTCTCTGATTCCTGTCGCTTTGTCTCACCAAACTGAGAACACTGTGTTTGAATAAGTTTTTAGAAACCTTATCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CCA 90 bp | CACTCCTGTACGGTGACATCTGATCTTTTCAAATATCAACACTCTCTAGTGACCTACCAGAGATTTTTATaGAAACTAGCAGCAGCAATA | + |
Preference number: 2 (lower is better) Translates to: HSCTVTSDLFKYQHSLVTYQRFL*KLAAAI Trigger: TATTGCTGCTGCTAGTTTCCATAAAAATCTCTGGTA...GGTCACTAGAGAGTGTTGATATTTGAAAAGATCAGATGTCACCGTACAGGAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CCA 90 bp | CTTCCTTCTGTGTCTCTAGTTTTAGGTGATCAGGCTTCTTGGACCATAATAGAAACAGAAATTCAGGGTTaGGCTTCTGTTTGTTTAAAA | + |
Preference number: 2 (lower is better) Translates to: LPSVSLVLGDQASWTIIETEIQG*ASVCLK Trigger: TTTTAAACAAACAGAAGCCCAACCCTGAATTTCTGT...TTCTATTATGGTCCAAGAAGCCTGATCACCTAAAACTAGAGACACAGAAGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR GCA 72 bp | AGAGAGAGAGAGAGGAGCCTGCCAGGGCCTGCCTTCTaGTGCCCATGCTTAGAGGCGAGAAGGGGGATGGGG | + |
Preference number: 3 (lower is better) Translates to: RERERSLPGPAF*CPCLEARRGMG Trigger: CCCCATCCCCCTTCTCGCCTCTAAGCATGGGCAGCAGAAGGCAGGCCCTGGCAGGCTCCTCTCTCTCTCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CAA 90 bp | GGCTCCAAGCCTTCTGGAAACTCCGCCCCTACTGGAGAGGAGAGGCTCAGAGAGCCCCAGTCTTGGGAGTaGGGGCTATCTCAGGAGCAT | + |
Preference number: 3 (lower is better) Translates to: GSKPSGNSAPTGEERLREPQSWE*GLSQEH Trigger: ATGCTCCTGAGATAGCCCCAACTCCCAAGACTGGGG...CTCTCTGAGCCTCTCCTCTCCAGTAGGGGCGGAGTTTCCAGAAGGCTTGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 72 bp | GAGAGGCTCCAAGCCTTCTGGAAACTCCGCCCCTACTaGAGAGGAGAGGCTCAGAGAGAGGAAGAGGCTTGG | + |
Preference number: 3 (lower is better) Translates to: ERLQAFWKLRPY*RGEAQREEEAW Trigger: CCAAGCCTCTTCCTCTCTCTGAGCCTCTCCTCTCCAGTAGGGGCGGAGTTTCCAGAAGGCTTGGAGCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR TCA 72 bp | CATGCTCAGAGGGGTAGTGGGGCAAAGTGTTGTCCCTaGGTGTGGAGCCTTGGGCTTAATACCCACAAGCCC | + |
Preference number: 3 (lower is better) Translates to: HAQRGSGAKCCP*VWSLGLNTHKP Trigger: GGGCTTGTGGGTATTAAGCCCAAGGCTCCACACTCAGGGACAACACTTTGCCCCACTACCCCTCTGAGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR GCA 72 bp | GCCACAGCAGCAGTCACTATGACCTGTATAACAGACTaGTCAGCAAGAGCTGTGGAGGGGCAGGCGCATTGC | + |
Preference number: 3 (lower is better) Translates to: ATAAVTMTCITD*SARAVEGQAHC Trigger: GCAATGCGCCTGCCCCTCCACAGCTCTTGCTGAGCAGTCTGTTATACAGGTCATAGTGACTGCTGCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 72 bp | CGACAGGAATCAGAGAAATGGCAACCTAAGCTCAGCTaGGATGCAGAGAGCGGGATGCGGAGAGCGAGAAGG | + |
Preference number: 3 (lower is better) Translates to: RQESEKWQPKLS*DAESGMRRARR Trigger: CCTTCTCGCTCTCCGCATCCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCTCTGATTCCTGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 72 bp | GTATTTGAGTGGCACATGGGCCCGATGTGTTCGGAGTaGACAGCAGTGTTTCAGGGCTTGGGAGAGCTGCAG | + |
Preference number: 3 (lower is better) Translates to: VFEWHMGPMCSE*TAVFQGLGELQ Trigger: CTGCAGCTCTCCCAAGCCCTGAAACACTGCTGTCCACTCCGAACACATCGGGCCCATGTGCCACTCAAATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 72 bp | GGTGTTGACACCTCATGGTGCCCTCTGGTATTTGAGTaGCACATGGGCCCGATGTGTTCGGAGTGGACAGCA | + |
Preference number: 3 (lower is better) Translates to: GVDTSWCPLVFE*HMGPMCSEWTA Trigger: TGCTGTCCACTCCGAACACATCGGGCCCATGTGCCACTCAAATACCAGAGGGCACCATGAGGTGTCAACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 72 bp | TCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTaGCAGGTGTTGACACCTCATGGTGCCCTCTGGTAT | + |
Preference number: 3 (lower is better) Translates to: SRAGGLLCVCVE*QVLTPHGALWY Trigger: ATACCAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 72 bp | AGGGCAGTGCCCATTGAGAGCACTGGTCAGACCCTATaGGACCTTCCAGATGAGGAGACTGAAGCTCACAGG | + |
Preference number: 3 (lower is better) Translates to: RAVPIESTGQTL*DLPDEETEAHR Trigger: CCTGTGAGCTTCAGTCTCCTCATCTGGAAGGTCCCATAGGGTCTGACCAGTGCTCTCAATGGGCACTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR GCA 72 bp | TGTTTGTGTGGAGTGGCAGGTGTTGACACCTCATGGTaGCCTCTGGTATTTGAGTGGCACATGGGCCCGATG | + |
Preference number: 3 (lower is better) Translates to: CLCGVAGVDTSW*PLVFEWHMGPM Trigger: CATCGGGCCCATGTGCCACTCAAATACCAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 72 bp | CGATGTGTTCGGAGTGGACAGCAGTGTTTCAGGGCTTaGGAGAGCTGCAGTTGGTCTTCTCCTTCAGGTAGC | + |
Preference number: 3 (lower is better) Translates to: RCVRSGQQCFRA*ESCSWSSPSGS Trigger: GCTACCTGAAGGAGAAGACCAACTGCAGCTCTCCCAAGCCCTGAAACACTGCTGTCCACTCCGAACACATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CAA 90 bp | CCAGGACTCATGGCTCTCTGTCTCTTTCCAATGAGACTCTGTCCCTTGACCTTGGCAGTGTTTCAGGGCTaGGGAGAGCTGCAGTTGGTC | + |
Preference number: 3 (lower is better) Translates to: PGLMALCLFPMRLCPLTLAVFQG*GELQLV Trigger: GACCAACTGCAGCTCTCCCAAGCCCTGAAACACTGC...CAAGGTCAAGGGACAGAGTCTCATTGGAAAGAGACAGAGAGCCATGAGTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR GCA 72 bp | TGGAGCCTGGATCCAGCCTGGCTGGCTTTGCTACTCTaGCTCTATAAAGACCAGGGAAAGGTGGTTCAACGA | + |
Preference number: 3 (lower is better) Translates to: WSLDPAWLALLL*LYKDQGKVVQR Trigger: TCGTTGAACCACCTTTCCCTGGTCTTTATAGAGGCAGAGTAGCAAAGCCAGCCAGGCTGGATCCAGGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR GCA 72 bp | TTGAGTGATGGAGCCTGGATCCAGCCTGGCTGGCTTTaGTACTCTGCCTCTATAAAGACCAGGGAAAGGTGG | + |
Preference number: 3 (lower is better) Translates to: LSDGAWIQPGWL*YSASIKTRERW Trigger: CCACCTTTCCCTGGTCTTTATAGAGGCAGAGTAGCAAAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR CCA 72 bp | TCTTCTCTTTCTTCAAGTAGTCTCCATACACGTGGCTaGGGGCAGGTCACTTTCCAGAGCTGGAGGGCTGCT | + |
Preference number: 3 (lower is better) Translates to: SSLSSSSLHTRG*GQVTFQSWRAA Trigger: AGCAGCCCTCCAGCTCTGGAAAGTGACCTGCCCCCAGCCACGTGTATGGAGACTACTTGAAGAAAGAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
3UTR-3UTR CAA 90 bp | TGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGGTATTTGAGTGGCGGCTTGGTTCTAGCTTaGGACTGTACTCTCTTGCCT | + |
Preference number: 3 (lower is better) Translates to: CVEWQVLTPHGALWYLSGGLVLA*DCTLLP Trigger: AGGCAAGAGAGTACAGTCCAAAGCTAGAACCAAGCC...GCCACTCAAATACCAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
3UTR-3UTR CAA 90 bp | GATATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCGTGGAGTGGCAGGTGTaGACACCTCATGGTGCCCTC | + |
Preference number: 3 (lower is better) Translates to: DIGVCFDDSSQFPPHSLSVEWQV*TPHGAL Trigger: GAGGGCACCATGAGGTGTCAACACCTGCCACTCCAC...GGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
3UTR-3UTR CAA 90 bp | GATATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCTCAGGGCAGTGCCCATaGAGAGCACTGGTCAGACCC | + |
Preference number: 3 (lower is better) Translates to: DIGVCFDDSSQFPPHSLSSGQCP*RALVRP Trigger: GGGTCTGACCAGTGCTCTCAATGGGCACTGCCCTGA...GGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR TCA 72 bp | GTGTGTCACAGTTCCACCAGGAATGTCTGGAAGCCATaGCCCATATGTTTCTCACTGCAGCAGGCCACAGCA | + |
Preference number: 3 (lower is better) Translates to: VCHSSTRNVWKP*PICFSLQQATA Trigger: TGCTGTGGCCTGCTGCAGTGAGAAACATATGGGTCATGGCTTCCAGACATTCCTGGTGGAACTGTGACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR CCA 72 bp | CCCCCATTTCCTCTCAGCCTCGCTTCTCTTACCATTTaGTACTTAGCTCAAGTGCCGAACGACATTGCTGGC | + |
Preference number: 3 (lower is better) Translates to: PPFPLSLASLTI*YLAQVPNDIAG Trigger: GCCAGCAATGTCGTTCGGCACTTGAGCTAAGTACCAAATGGTAAGAGAAGCGAGGCTGAGAGGAAATGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR-3UTR CAA 90 bp | CACTTCCAGTGGCACATTTCCTCCACAAGGCCACTCCACTCCTGTACGGTGACATTTCCTTGGCCTCACTaGCAGAAATGCTCACTTTCT | + |
Preference number: 3 (lower is better) Translates to: HFQWHISSTRPLHSCTVTFPWPH*QKCSLS Trigger: AGAAAGTGAGCATTTCTGCAAGTGAGGCCAAGGAAA...TGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR-3UTR CAA 90 bp | ATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCAGGTTGCTAACCCCAGTCTaGGGAGTTGGGGCTATCTCA | + |
Preference number: 3 (lower is better) Translates to: IGVCFDDSSQFPPHSLSRLLTPV*GVGAIS Trigger: TGAGATAGCCCCAACTCCCAAGACTGGGGTTAGCAA...CCTGGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
3UTR-3UTR CAA 90 bp | GAACCCAGGACTCATGGCTCTCTGTCTCTTTCCAATGAGACTCTGTCCCTTGACGAGAGAGGAAGAGGCTaGGTTCTAGCTTTGGACTGT | + |
Preference number: 3 (lower is better) Translates to: EPRTHGSLSLSNETLSLDERGRG*VLALDC Trigger: ACAGTCCAAAGCTAGAACCAAGCCTCTTCCTCTCTC...GTCAAGGGACAGAGTCTCATTGGAAAGAGACAGAGAGCCATGAGTCCTGGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
3UTR TCA 72 bp | GAATCCCAGTATCACCCAGGAATGAGCAGTGAAGACTaGGGACCAGGGAGGAAAGGTTGCTTGCATTCACTG | + |
Preference number: 3 (lower is better) Translates to: ESQYHPGMSSED*GPGRKGCLHSL Trigger: CAGTGAATGCAAGCAACCTTTCCTCCCTGGTCCTCAGTCTTCACTGCTCATTCCTGGGTGATACTGGGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR GCA 72 bp | TTCCAGACAGTGTTCTCTGAGGGACAGCTCGGGCTCTaGTCTTGGTCCCCCAAACCTGAATTGCTATTTTCT | + |
Preference number: 3 (lower is better) Translates to: FQTVFSEGQLGL*SWSPKPELLFS Trigger: AGAAAATAGCAATTCAGGTTTGGGGGACCAAGAGCAGAGCCCGAGCTGTCCCTCAGAGAACACTGTCTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
3UTR CCA 72 bp | GTTTGGGCTTTTGAAAACCTCAAAGCCCACTTCCAGTaGCACATTTCCTCCACAAGGCCACTCCACTCCTGT | + |
Preference number: 3 (lower is better) Translates to: VWAFENLKAHFQ*HISSTRPLHSC Trigger: ACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTGGGCTTTGAGGTTTTCAAAAGCCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR CCA 72 bp | TTTCCCCTGCATATTGCTAACCCCAGTCTTGGGAGTTaGGGCTATCTCAGGAGCATGAGTGTGCTGCAGTTT | + |
Preference number: 3 (lower is better) Translates to: FPLHIANPSLGS*GYLRSMSVLQF Trigger: AAACTGCAGCACACTCATGCTCCTGAGATAGCCCCAACTCCCAAGACTGGGGTTAGCAATATGCAGGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
3UTR-3UTR CAA 90 bp | ACTCATGGCTCTCTGTCTCTTTCCAATGAGACTCTGTCCCTTGACCTTGACTCCTTGGACTGTACTCTCTaGCCTAGAGATTTCCCCTGC | + |
Preference number: 3 (lower is better) Translates to: THGSLSLSNETLSLDLDSLDCTL*PRDFPC Trigger: GCAGGGGAAATCTCTAGGCAAGAGAGTACAGTCCAA...GGAGTCAAGGTCAAGGGACAGAGTCTCATTGGAAAGAGACAGAGAGCCATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
3UTR TCA 72 bp | AGGAAAGGTTGCTTGCATTCACTGATCTTCTGTTGGTaGCTGACCATACAGCAGGTGTTGGGCTGGGATTCG | + |
Preference number: 3 (lower is better) Translates to: RKGCLHSLIFCW*LTIQQVLGWDS Trigger: CGAATCCCAGCCCAACACCTGCTGTATGGTCAGTCACCAACAGAAGATCAGTGAATGCAAGCAACCTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR TCA 72 bp | AAAGGTGGTTCAACGAATCCCAGTATCACCCAGGAATaGGCAGTGAAGACTGAGGACCAGGGAGGAAAGGTT | + |
Preference number: 3 (lower is better) Translates to: KGGSTNPSITQE*AVKTEDQGGKV Trigger: AACCTTTCCTCCCTGGTCCTCAGTCTTCACTGCTCATTCCTGGGTGATACTGGGATTCGTTGAACCACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR CCA 72 bp | GGCAAGAGCATGGTGGCATGCAGGCAAACATGGTGCTaGAGAATTGGCCAAAACTCCTACATCTTTATCCAC | + |
Preference number: 3 (lower is better) Translates to: GKSMVACRQTWC*RIGQNSYIFIH Trigger: GTGGATAAAGATGTAGGAGTTTTGGCCAATTCTCCAGCACCATGTTTGCCTGCATGCCACCATGCTCTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR-3UTR CAA 90 bp | CACTTCCAGTGGCACATTTCCTCCACAAGGCCACTCCACTCCTGTACGGTGACAATGTTGGTTCTCATGTaGAATGCTGGTTTTCTGGAA | + |
Preference number: 3 (lower is better) Translates to: HFQWHISSTRPLHSCTVTMLVLM*NAGFLE Trigger: TTCCAGAAAACCAGCATTCAACATGAGAACCAACAT...TGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR TCA 72 bp | AGGCAGTCAGCTGTCCATCATTACAAAAATTTTGAGTaGTGGAGCCTGGATCCAGCCTGGCTGGCTTTGCTA | + |
Preference number: 3 (lower is better) Translates to: RQSAVHHYKNFE*WSLDPAWLALL Trigger: TAGCAAAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR TCA 72 bp | GTTTCCTTGGCCTCACTTGCAGAAATGCTCACTTTCTaGAGGTCATCACCCTCTAGGCTGATTCTTGGCGTT | + |
Preference number: 3 (lower is better) Translates to: VSLASLAEMLTF*RSSPSRLILGV Trigger: AACGCCAAGAATCAGCCTAGAGGGTGATGACCTTCAGAAAGTGAGCATTTCTGCAAGTGAGGCCAAGGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR CCA 72 bp | CTGTCCATCATTACAAAAATTTTGAGTGATGGAGCCTaGATCCAGCCTGGCTGGCTTTGCTACTCTGCCTCT | + |
Preference number: 3 (lower is better) Translates to: LSIITKILSDGA*IQPGWLCYSAS Trigger: AGAGGCAGAGTAGCAAAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAAAATTTTTGTAATGATGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR-3UTR CAA 90 bp | AATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTTAAAGCCAGCCTGGCTGGCTTaGCTACTCTGCCTCTATAAA | + |
Preference number: 3 (lower is better) Translates to: NCAQPEVGICMGNLKLLKPAWLA*LLCLYK Trigger: TTTATAGAGGCAGAGTAGCAAAGCCAGCCAGGCTGG...CTTTAAAAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
||
3UTR-3UTR CAA 90 bp | CACTTTCTGAATATGAAAACATCCAGACTCGCCCACATCCACACTCTGTGTCATATCCATTCTCAGATGTaGCACTGTGTGGGGTTCCCG | + |
Preference number: 3 (lower is better) Translates to: HFLNMKTSRLAHIHTLCHIHSQM*HCVGFP Trigger: CGGGAACCCCACACAGTGCAACATCTGAGAATGGAT...ATGACACAGAGTGTGGATGTGGGCGAGTCTGGATGTTTTCATATTCAGAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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3UTR-3UTR CAA 90 bp | GGAGAATTGGCCAAAACTCCTACATCTTTATCCACAGGCAGCAGGAAGAGAGCCATAAGGTCTGACCACTaGCTTCTCATGGTTGAAGAA | + |
Preference number: 3 (lower is better) Translates to: GELAKTPTSLSTGSRKRAIRSDH*LLMVEE Trigger: TTCTTCAACCATGAGAAGCAAGTGGTCAGACCTTAT...GGCTCTCTTCCTGCTGCCTGTGGATAAAGATGTAGGAGTTTTGGCCAATTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 72 bp | AAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTTTaGGTGATGGAGCCTGGATCCAGCCTGGCTGGCTTT | + |
Preference number: 3 (lower is better) Translates to: KEAVSCPSLQKF*VMEPGSSLAGF Trigger: AAAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 72 bp | TCTCTTCGAATAGTAGTCAAGCGTGTAGGAATAGAGTaGCATGCTCAGAGGGGTAGTGGGGCAAAGTGTTGT | + |
Preference number: 3 (lower is better) Translates to: SLRIVVKRVGIE*HAQRGSGAKCC Trigger: ACAACACTTTGCCCCACTACCCCTCTGAGCATGTCACTCTATTCCTACACGCTTGACTACTATTCGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR GCA 72 bp | ACTCCCAGAACAGCAAGGGATAGATGGGTTGGAGTATaGTACTTGGTATATTCTCTACTGAGCTCAGGCTCT | + |
Preference number: 3 (lower is better) Translates to: TPRTARDRWVGV*YLVYSLLSSGS Trigger: AGAGCCTGAGCTCAGTAGAGAATATACCAAGTAGCATACTCCAACCCATCTATCCCTTGCTGTTCTGGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 72 bp | TATCATGGCAAGAGCATGGTGGCATGCAGGCAAACATaGTGCTGGAGAATTGGCCAAAACTCCTACATCTTT | + |
Preference number: 3 (lower is better) Translates to: YHGKSMVACRQT*CWRIGQNSYIF Trigger: AAAGATGTAGGAGTTTTGGCCAATTCTCCAGCACCATGTTTGCCTGCATGCCACCATGCTCTTGCCATGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CAA 90 bp | AGAATAAATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTCATGAGAGACAAGGGTaGATAAGACTTCACAACCCC | + |
Preference number: 3 (lower is better) Translates to: RINCAQPEVGICMGNLKLHERQG*IRLHNP Trigger: GGGGTTGTGAAGTCTTATCAACCCTTGTCTCTCATG...AAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATTTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 72 bp | CTCCACAAGGCCACTCCACTCCTGTACGGTGACATCTaGTCTTTTCAAATATCAACACTCTCTAGTGACCAA | + |
Preference number: 3 (lower is better) Translates to: LHKATPLLYGDI*SFQISTLSSDQ Trigger: TTGGTCACTAGAGAGTGTTGATATTTGAAAAGATCAGATGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 72 bp | GGCTATCTCAGGAGCATGAGTGTGCTGCAGTTTATTTaGTCTGGTAAGAATCATGGACTATGCTGTTGGCAG | + |
Preference number: 3 (lower is better) Translates to: GYLRSMSVLQFI*SGKNHGLCCWQ Trigger: CTGCCAACAGCATAGTCCATGATTCTTACCAGATCAAATAAACTGCAGCACACTCATGCTCCTGAGATAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CCA 72 bp | CTATCAAGAGTTTATAAGGGACCTCCACCTGCCTCGTaGACACAGACGCCTTTTGCTAAGTCACAGTTTTTA | + |
Preference number: 3 (lower is better) Translates to: LSRVYKGPPPAS*TQTPFAKSQFL Trigger: TAAAAACTGTGACTTAGCAAAAGGCGTCTGTGTCCACGAGGCAGGTGGAGGTCCCTTATAAACTCTTGATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 72 bp | TATCAACACTCTCTAGTGACCAAGCATACAAATATGTaGGCCTGTGGGGGCCATTCTTACTCAAACCATGAG | + |
Preference number: 3 (lower is better) Translates to: YQHSLVTKHTNM*ACGGHSYSNHE Trigger: CTCATGGTTTGAGTAAGAATGGCCCCCACAGGCTCACATATTTGTATGCTTGGTCACTAGAGAGTGTTGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR TCA 72 bp | TTGGTTATCCATAGATTTATTTCCACTGTAGACCCCTaGCAAGAGAAACGGAGTGCAGAGGCCCTTATAGAG | + |
Preference number: 3 (lower is better) Translates to: LVIHRFISTVDP*QEKRSAEALIE Trigger: CTCTATAAGGGCCTCTGCACTCCGTTTCTCTTGTCAGGGGTCTACAGTGGAAATAAATCTATGGATAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR TCA 72 bp | GCAGCAGCAATACAGGTCGAGGGTCAAAGTCTTCTATaGAGAACAATTCTCATACACAGAAATTCAGGGTTG | + |
Preference number: 3 (lower is better) Translates to: AAAIQVEGQSLL*RTILIHRNSGL Trigger: CAACCCTGAATTTCTGTGTATGAGAATTGTTCTTCATAGAAGACTTTGACCCTCGACCTGTATTGCTGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 72 bp | TCTGGGTTGAGCATAGTCTCAAATATTAGAGTGACCTaGCAAGTCTTGTGCCCATATTTTCTTCTGTTTTCC | + |
Preference number: 3 (lower is better) Translates to: SGLSIVSNIRVT*QVLCPYFLLFS Trigger: GGAAAACAGAAGAAAATATGGGCACAAGACTTGCCAGGTCACTCTAATATTTGAGACTATGCTCAACCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR-3UTR CAA 90 bp | AATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTTAAAGATCATTACAAAAATTTaGAGTGATGGAGCCTGGATC | + |
Preference number: 3 (lower is better) Translates to: NCAQPEVGICMGNLKLLKIITKI*SDGAWI Trigger: GATCCAGGCTCCATCACTCAAAATTTTTGTAATGAT...CTTTAAAAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CAA 90 bp | ATCATGTCACAGGCATTTATAGGACAAGGTTCAAGTTCCATGGTATATTTAGTTTTCACTGATCTTCTGTaGGTGACTGACCATACAGCA | + |
Preference number: 3 (lower is better) Translates to: IMSQAFIGQGSSSMVYLVFTDLL*VTDHTA Trigger: TGCTGTATGGTCAGTCACCAACAGAAGATCAGTGAA...AACTAAATATACCATGGAACTTGAACCTTGTCCTATAAATGCCTGTGACATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CAA 90 bp | CATTGCCTCCAAGCAGTTTCAAAACTGCATCAAAAGTCTTCATCAGGAACTAAAGGGTTGGGCTTCTGTTaGTTTAAAAATCTTGTCTTG | + |
Preference number: 3 (lower is better) Translates to: HCLQAVSKLHQKSSSGTKGLGFC*FKNLVL Trigger: CAAGACAAGATTTTTAAACAAACAGAAGCCCAACCC...TTTAGTTCCTGATGAAGACTTTTGATGCAGTTTTGAAACTGCTTGGAGGCAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR-3UTR CAA 90 bp | CATTCAGTCTATAAACCCATGGTTGTTAAGACAGCAGTAGAAGCCAGAGATTTGCCCATTGTCTTTTCATaGCTTTTTGCAGTAAGTTTG | + |
Preference number: 3 (lower is better) Translates to: HSVYKPMVVKTAVEARDLPIVFS*LFAVSL Trigger: CAAACTTACTGCAAAAAGCAATGAAAAGACAATGGG...CAAATCTCTGGCTTCTACTGCTGTCTTAACAACCATGGGTTTATAGACTGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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3UTR TCA 72 bp | TTGGAGAAAGGCCTGTTTAGATGTTGGTTCTCATGTTaGATGCTGGTTTTCTGGAAATATCATTACTATGGG | + |
Preference number: 3 (lower is better) Translates to: LEKGLFRCWFSC*MLVFWKYHYYG Trigger: CCCATAGTAATGATATTTCCAGAAAACCAGCATTCAACATGAGAACCAACATCTAAACAGGCCTTTCTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 72 bp | GGTATCTGCATGGGAAACCTGAAGCTTTTAAAGCGCTaGTGTTCTGATAAGGATAAATACGCTATTTTAGTT | + |
Preference number: 3 (lower is better) Translates to: GICMGNLKLLKR*CSDKDKYAILV Trigger: AACTAAAATAGCGTATTTATCCTTATCAGAACACCAGCGCTTTAAAAGCTTCAGGTTTCCCATGCAGATACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CCA 72 bp | CAGGGTTGGGCTTCTGTTTGTTTAAAAATCTTGTCTTaGATAAGGTTTCTAAAAACTTATTCAAACACAGTG | + |
Preference number: 3 (lower is better) Translates to: QGWASVCLKILS*IRFLKTYSNTV Trigger: CACTGTGTTTGAATAAGTTTTTAGAAACCTTATCCAAGACAAGATTTTTAAACAAACAGAAGCCCAACCCTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR GCA 90 bp | AGGAGCCTGCCAGGGCCTGCCTTCTGCTGCCCATGCTTAGAGGCGAGAAGGGGGTATCGGTGGTCTCCCTaGCACAAAAGGTTGCCAGCA | + |
Preference number: 4 (lower is better) Translates to: RSLPGPAFCCPCLEARRGYRWSP*HKRLPA Trigger: TGCTGGCAACCTTTTGTGGCAGGGAGACCACCGATA...CCCCCTTCTCGCCTCTAAGCATGGGCAGCAGAAGGCAGGCCCTGGCAGGCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | AGGGCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTTCTCTTCACCAGGTTTaGCAGGGCGCGGGAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: RAALCLCGVAGVDTSWCPSLHQV*QGAGGL Trigger: CAGCCCTCCCGCGCCCTGCCAAACCTGGTGAAGAGA...AGGGCACCATGAGGTGTCAACACCTGCCACTCCACACAAACACAGAGCAGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
||
CDS-3UTR TCA 90 bp | AGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGATGCGGAGAGCGACAGCCTCGGGCTCTCTaGCAGTTCCACCAGACCAAG | + |
Preference number: 4 (lower is better) Translates to: RNGNLSSAGMQRAGCGERQPRAL*QFHQTK Trigger: CTTGGTCTGGTGGAACTGTCAGAGAGCCCGAGGCTG...TCGCTCTCCGCATCCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | TCACTTTCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGCTACCTGGAGGTCCCTaGCAGCCCTCGGGGAGTTCA | + |
Preference number: 4 (lower is better) Translates to: SLSRAGGLLCVCVEWQVLLPGGP*QPSGSS Trigger: TGAACTCCCCGAGGGCTGTCAGGGACCTCCAGGTAG...CAACACCTGCCACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGAAAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | ACACTTAGAGAGGCTCCAAGCCTTCTGGAAACTCCGCCCCTACTGGAGAGGAGATCCTGGCCGGGGGTCTaGTCAGTATCGGTGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: TLREAPSLLETPPLLERRSWPGV*SVSVVS Trigger: GGAGACCACCGATACTGAGCAGACCCCCGGCCAGGA...TCTCCTCTCCAGTAGGGGCGGAGTTTCCAGAAGGCTTGGAGCCTCTCTAAGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | AGTCTCCATACACGTGGCTGGGGGCAGGTCACTTTCCAGAGCTGGAGGGCTGCTAAGGAATACACGGCCTaGGAGGGCTCGATTTTCCCG | + |
Preference number: 4 (lower is better) Translates to: SLHTRGWGQVTFQSWRAAKEYTA*EGSIFP Trigger: CGGGAAAATCGAGCCCTCGCAGGCCGTGTATTCCTT...AGCAGCCCTCCAGCTCTGGAAAGTGACCTGCCCCCAGCCACGTGTATGGAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | GAATTCAGGGCAGTGCCCATTGAGAGCACTGGTCAGACCCTATGGGACCTTCCAGTAGACAGATGGGCATaGCATGGGCCCCCAAGGGCA | + |
Preference number: 4 (lower is better) Translates to: EFRAVPIESTGQTLWDLPVDRWA*HGPPRA Trigger: TGCCCTTGGGGGCCCATGTCATGCCCATCTGTCTAC...TGGAAGGTCCCATAGGGTCTGACCAGTGCTCTCAATGGGCACTGCCCTGAATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | CGACAGGAATCAGAGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGGGCATGGTACCCTTCTaGGCTGGGCGGCCATTGAAG | + |
Preference number: 4 (lower is better) Translates to: RQESEKWQPKLSWDAESGGMVPF*AGRPLK Trigger: CTTCAATGGCCGCCCAGCCCAGAAGGGTACCATGCC...CCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCTCTGATTCCTGTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | AGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGATGCGGAGAGCGATGGCAATCCATGGCATaGTACCCTTCTGGGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: RNGNLSSAGMQRAGCGERWQSMA*YPSGLG Trigger: GCCCAGCCCAGAAGGGTACCATGCCATGGATTGCCA...TCGCTCTCCGCATCCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | AGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGATGCGGAGAGCGATTTAGCTCCACGGTATaGGCTGAAACCTCCGGCAGG | + |
Preference number: 4 (lower is better) Translates to: RNGNLSSAGMQRAGCGERFSSTV*AETSGR Trigger: CCTGCCGGAGGTTTCAGCCCATACCGTGGAGCTAAA...TCGCTCTCCGCATCCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | GGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGATGCGGAGAGCGAGAAGGACCCACCAGGTACCATTaGTCTCTCTCTGCATCTTTG | + |
Preference number: 4 (lower is better) Translates to: GNLSSAGMQRAGCGEREGPTRYH*SLSASL Trigger: CAAAGATGCAGAGAGAGACCAATGGTACCTGGTGGG...TCCTTCTCGCTCTCCGCATCCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | CGACAGGAATCAGAGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGCGAGCACTTGGTCTTTaGAGGAATACACGGCCTGCG | + |
Preference number: 4 (lower is better) Translates to: RQESEKWQPKLSWDAESGRALGL*RNTRPA Trigger: CGCAGGCCGTGTATTCCTTCAAAGACCAAGTGCTCG...CCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCTCTGATTCCTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | GATCCAGCCTGGCTGGCTTTGCTACTCTGCCTCTATAAAGACCAGGGAAAGGTGGACTGGTGGAGGCAGTaGGCAGCTGTCAAAACCCAG | + |
Preference number: 4 (lower is better) Translates to: DPAWLALLLCLYKDQGKVDWWRQ*AAVKTQ Trigger: CTGGGTTTTGACAGCTGCTCACTGCCTCCACCAGTC...CACCTTTCCCTGGTCTTTATAGAGGCAGAGTAGCAAAGCCAGCCAGGCTGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | TGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGGTATTTGAGTGGCTGTCTTCCACCACTATaGGGGCCTGCCATGGGAAGA | + |
Preference number: 4 (lower is better) Translates to: CVEWQVLTPHGALWYLSGCLPPL*GPAMGR Trigger: TCTTCCCATGGCAGGCCCTCATAGTGGTGGAAGACA...GCCACTCAAATACCAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | GGGGTAGTGGGGCAAAGTGTTGTCCCTGAGTGTGGAGCCTTGGGCTTAATACCCTCTGCTCAGTATCGGTaGTCTCCCTGCCACAAAAGG | + |
Preference number: 4 (lower is better) Translates to: GVVGQSVVPECGALGLIPSAQYR*SPCHKR Trigger: CCTTTTGTGGCAGGGAGACCACCGATACTGAGCAGA...GGGTATTAAGCCCAAGGCTCCACACTCAGGGACAACACTTTGCCCCACTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | GAATTCAGGGCAGTGCCCATTGAGAGCACTGGTCAGACCCTATGGGACCTTCCAAGGATCTGGACACTGTaGGTCTGGGTGCTGATTGGT | + |
Preference number: 4 (lower is better) Translates to: EFRAVPIESTGQTLWDLPRIWTL*VWVLIG Trigger: ACCAATCAGCACCCAGACTCACAGTGTCCAGATCCT...TGGAAGGTCCCATAGGGTCTGACCAGTGCTCTCAATGGGCACTGCCCTGAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | AGTCCCAGGAACAAAAGTGTTTCCAGACAGTGTTCTCTGAGGGACAGCTCGGGCCGAGCACTTGGTCTTTaGAGGAATACACGGCCTGCG | + |
Preference number: 4 (lower is better) Translates to: SPRNKSVSRQCSLRDSSGRALGL*RNTRPA Trigger: CGCAGGCCGTGTATTCCTTCAAAGACCAAGTGCTCG...GCCCGAGCTGTCCCTCAGAGAACACTGTCTGGAAACACTTTTGTTCCTGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | CACTTCCAGTGGCACATTTCCTCCACAAGGCCACTCCACTCCTGTACGGTGACATTCTTCTGGATCAAGTaGCTGGTGGAGGCAGTGAGC | + |
Preference number: 4 (lower is better) Translates to: HFQWHISSTRPLHSCTVTFFWIK*LVEAVS Trigger: GCTCACTGCCTCCACCAGTCACTTGATCCAGAAGAA...TGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | TCACTTTCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGGAACATGGGCTGCTGTaGGTATCCAGGACTCAGAGA | + |
Preference number: 4 (lower is better) Translates to: SLSRAGGLLCVCVEWQVLEHGLL*VSRTQR Trigger: TCTCTGAGTCCTGGATACTCACAGCAGCCCATGTTC...CAACACCTGCCACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGAAAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | TGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGGTATTTGAGTGGCCCTTCGAGACAGGTATaGCTGTGTTGTCTCTGCGCT | + |
Preference number: 4 (lower is better) Translates to: CVEWQVLTPHGALWYLSGPSRQV*LCCLCA Trigger: AGCGCAGAGACAACACAGTCATACCTGTCTCGAAGG...GCCACTCAAATACCAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | AGTCCCAGGAACAAAAGTGTTTCCAGACAGTGTTCTCTGAGGGACAGCTCGGGCGGGCAGCAGAGCTATTaGCAGCTCCTGATTTGTCCC | + |
Preference number: 4 (lower is better) Translates to: SPRNKSVSRQCSLRDSSGGQQSY*QLLICP Trigger: GGGACAAATCAGGAGCTGTCAATAGCTCTGCTGCCC...GCCCGAGCTGTCCCTCAGAGAACACTGTCTGGAAACACTTTTGTTCCTGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | GAGAGGCTCAGAGAGAGGAAGAGGCTTGGTTCTAGCTTTGGACTGTACTCTCTTACCAGTCCCAACATGTaGGGGGCTGGACCTTCAGGC | + |
Preference number: 4 (lower is better) Translates to: ERLRERKRLGSSFGLYSLTSPNM*GAGPSG Trigger: GCCTGAAGGTCCAGCCCCTCACATGTTGGGACTGGT...AAGAGAGTACAGTCCAAAGCTAGAACCAAGCCTCTTCCTCTCTCTGAGCCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | ACACTTAGAGAGGCTCCAAGCCTTCTGGAAACTCCGCCCCTACTGGAGAGGAGATGGGAACGCAGAACATaGGCTGCTGTGAGTATCCAG | + |
Preference number: 4 (lower is better) Translates to: TLREAPSLLETPPLLERRWERRT*AAVSIQ Trigger: CTGGATACTCACAGCAGCCCATGTTCTGCGTTCCCA...TCTCCTCTCCAGTAGGGGCGGAGTTTCCAGAAGGCTTGGAGCCTCTCTAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | TGGGGGCAGGTCACTTTCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTGACCGAGACTCATAGCTaGCTTTGCATTCAGCATGTG | + |
Preference number: 4 (lower is better) Translates to: WGQVTFQSWRAALCLCGVTETHS*LCIQHV Trigger: CACATGCTGAATGCAAAGCCAGCTATGAGTCTCGGT...CACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGAAAGTGACCTGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CAA 72 bp | GTAGTGGGGCAAAGTGTTGTCCCTGAGTGTGGAGCCTaGGGCTTAATACCCACAAGCCCTCATTCCTCACTG | + |
Preference number: 4 (lower is better) Translates to: VVGQSVVPECGA*GLIPTSPHSSL Trigger: CAGTGAGGAATGAGGGCTTGTGGGTATTAAGCCCAAGGCTCCACACTCAGGGACAACACTTTGCCCCACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | CACTTCCAGTGGCACATTTCCTCCACAAGGCCACTCCACTCCTGTACGGTGACATGTGAGTCTGGGTGCTaGTTGGTTCTGGGGATTTCT | + |
Preference number: 4 (lower is better) Translates to: HFQWHISSTRPLHSCTVTCESGC*LVLGIS Trigger: AGAAATCCCCAGAACCAATCAGCACCCAGACTCACA...TGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | GCAGGCCACAGCAGCAGTCACTATGACCTGTATAACAGACTGCTCAGCAAGAGCAGGATCTGGACACTGTaGGTCTGGGTGCTGATTGGT | + |
Preference number: 4 (lower is better) Translates to: AGHSSSHYDLYNRLLSKSRIWTL*VWVLIG Trigger: ACCAATCAGCACCCAGACTCACAGTGTCCAGATCCT...GCTCTTGCTGAGCAGTCTGTTATACAGGTCATAGTGACTGCTGCTGTGGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR GCA 90 bp | AGTCCCAGGAACAAAAGTGTTTCCAGACAGTGTTCTCTGAGGGACAGCTCGGGCCCTGCCACAAAAGGTTaGCAGCACCTGGTCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: SPRNKSVSRQCSLRDSSGPATKG*QHLVFC Trigger: ACAGAAGACCAGGTGCTGGCAACCTTTTGTGGCAGG...GCCCGAGCTGTCCCTCAGAGAACACTGTCTGGAAACACTTTTGTTCCTGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | AGCCCCAGCAGTAAAGAACCTCAGATAACAGAACTTCATCCCAAAAAGTGTGGCTCCTGGCCGGGGGTCTaGTCAGTATCGGTGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: SPSSKEPQITELHPKKCGSWPGV*SVSVVS Trigger: GGAGACCACCGATACTGAGCAGACCCCCGGCCAGGA...GCCACACTTTTTGGGATGAAGTTCTGTTATCTGAGGTTCTTTACTGCTGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR GCA 90 bp | TGGGGGCAGGTCACTTTCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTGAAAATGTCCTCAAACTaGAGGCTGACCATGAAGCCT | + |
Preference number: 4 (lower is better) Translates to: WGQVTFQSWRAALCLCGVKMSSN*RLTMKP Trigger: AGGCTTCATGGTCAGCCTGCAGTTTGAGGACATTTT...CACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGAAAGTGACCTGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | GATCCAGCCTGGCTGGCTTTGCTACTCTGCCTCTATAAAGACCAGGGAAAGGTGAAGATCCTGGAGATCTaGTTCCGGGAGAACTTGGGG | + |
Preference number: 4 (lower is better) Translates to: DPAWLALLLCLYKDQGKVKILEI*FRENLG Trigger: CCCCAAGTTCTCCCGGAAGCAGATCTCCAGGATCTT...CACCTTTCCCTGGTCTTTATAGAGGCAGAGTAGCAAAGCCAGCCAGGCTGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR GCA 90 bp | GCAGGCCACAGCAGCAGTCACTATGACCTGTATAACAGACTGCTCAGCAAGAGCAACCTCTGTAAGAACTaGTTCCCCCAGCCACTGACG | + |
Preference number: 4 (lower is better) Translates to: AGHSSSHYDLYNRLLSKSNLCKN*FPQPLT Trigger: CGTCAGTGGCTGGGGGAAGCAGTTCTTACAGAGGTT...GCTCTTGCTGAGCAGTCTGTTATACAGGTCATAGTGACTGCTGCTGTGGCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | AGTCCCAGGAACAAAAGTGTTTCCAGACAGTGTTCTCTGAGGGACAGCTCGGGCTCTGCTCAGTATCGGTaGTCTCCCTGCCACAAAAGG | + |
Preference number: 4 (lower is better) Translates to: SPRNKSVSRQCSLRDSSGSAQYR*SPCHKR Trigger: CCTTTTGTGGCAGGGAGACCACCGATACTGAGCAGA...GCCCGAGCTGTCCCTCAGAGAACACTGTCTGGAAACACTTTTGTTCCTGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | TCACTTTCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGAGTCTGGGTGCTGATTaGTTCTGGGGATTTCTCTCC | + |
Preference number: 4 (lower is better) Translates to: SLSRAGGLLCVCVEWQVLSLGAD*FWGFLS Trigger: GGAGAGAAATCCCCAGAACCAATCAGCACCCAGACT...CAACACCTGCCACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGAAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | GCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGCAGCTGACGAGCACTTaGTCTTTGAAGGAATACACG | + |
Preference number: 4 (lower is better) Translates to: AALCLCGVAGVDTSWCPLQLTST*SLKEYT Trigger: CGTGTATTCCTTCAAAGACCAAGTGCTCGTCAGCTG...CAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACAAACACAGAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | ATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCAGGTATGAGGGCCTGCCATaGGAAGAGGCCAAGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: IGVCFDDSSQFPPHSLSRYEGLP*EEAKLS Trigger: GCTGAGCTTGGCCTCTTCCCATGGCAGGCCCTCATA...CCTGGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | TCACTTTCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGCCAGGTGACTGGATCTaGCCAAACATTTCGTTTAGC | + |
Preference number: 4 (lower is better) Translates to: SLSRAGGLLCVCVEWQVLPGDWI*PNISFS Trigger: GCTAAACGAAATGTTTGGTCAGATCCAGTCACCTGG...CAACACCTGCCACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGAAAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | ACTCATGGCTCTCTGTCTCTTTCCAATGAGACTCTGTCCCTTGACCTTGACTCCGGGCGTCGAAGCCTGTaGATCGTTCCTCATTGGAGA | + |
Preference number: 4 (lower is better) Translates to: THGSLSLSNETLSLDLDSGRRSL*IVPHWR Trigger: TCTCCAATGAGGAACGATTCACAGGCTTCGACGCCC...GGAGTCAAGGTCAAGGGACAGAGTCTCATTGGAAAGAGACAGAGAGCCATGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | AGTCCCAGGAACAAAAGTGTTTCCAGACAGTGTTCTCTGAGGGACAGCTCGGGCAGAACATGTTCTCTGTaGCACTGTAGTTGCCCGACC | + |
Preference number: 4 (lower is better) Translates to: SPRNKSVSRQCSLRDSSGRTCSL*HCSCPT Trigger: GGTCGGGCAACTACAGTGTCACAGAGAACATGTTCT...GCCCGAGCTGTCCCTCAGAGAACACTGTCTGGAAACACTTTTGTTCCTGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | TGGGCTTTTGAAAACCTCAAAGCCCACTTCCAGTGGCACATTTCCTCCACAAGGAAGGAATACACGGCCTaGGAGGGCTCGATTTTCCCG | + |
Preference number: 4 (lower is better) Translates to: WAFENLKAHFQWHISSTRKEYTA*EGSIFP Trigger: CGGGAAAATCGAGCCCTCGCAGGCCGTGTATTCCTT...CCTTGTGGAGGAAATGTGCCACTGGAAGTGGGCTTTGAGGTTTTCAAAAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR GCA 90 bp | CACTTCCAGTGGCACATTTCCTCCACAAGGCCACTCCACTCCTGTACGGTGACAGATCTTGTTACTCCATaGACCGTCCTTCAGACACTC | + |
Preference number: 4 (lower is better) Translates to: HFQWHISSTRPLHSCTVTDLVTP*TVLQTL Trigger: GAGTGTCTGAAGGACGGTGCATGGAGTAACAAGATC...TGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR GCA 90 bp | GATATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCACCACTATGAGGGCCTaGCATGGGAAGAGGCCAAGC | + |
Preference number: 4 (lower is better) Translates to: DIGVCFDDSSQFPPHSLSTTMRA*HGKRPS Trigger: GCTTGGCCTCTTCCCATGGCAGGCCCTCATAGTGGT...GGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAATATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | AGCACTGGTCAGACCCTATGGGACCTTCCAGATGAGGAGACTGAAGCTCACAGGAAGGTTGCCAGCACCTaGTCTTCTGTTTCTACCTTC | + |
Preference number: 4 (lower is better) Translates to: STGQTLWDLPDEETEAHRKVAST*SSVSTF Trigger: GAAGGTAGAAACAGAAGACCAGGTGCTGGCAACCTT...CCTGTGAGCTTCAGTCTCCTCATCTGGAAGGTCCCATAGGGTCTGACCAGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | CACTTCCAGTGGCACATTTCCTCCACAAGGCCACTCCACTCCTGTACGGTGACACAGCTGACGAGCACTTaGTCTTTGAAGGAATACACG | + |
Preference number: 4 (lower is better) Translates to: HFQWHISSTRPLHSCTVTQLTST*SLKEYT Trigger: CGTGTATTCCTTCAAAGACCAAGTGCTCGTCAGCTG...TGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | AGTCTCCATACACGTGGCTGGGGGCAGGTCACTTTCCAGAGCTGGAGGGCTGCTCTACAATTTTACAGGTaGGGATCTTGTTACTCCATG | + |
Preference number: 4 (lower is better) Translates to: SLHTRGWGQVTFQSWRAALQFYR*GSCYSM Trigger: CATGGAGTAACAAGATCCCCACCTGTAAAATTGTAG...AGCAGCCCTCCAGCTCTGGAAAGTGACCTGCCCCCAGCCACGTGTATGGAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | AATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTTAAAGGGGGACACCACACACTaGAAGGCAGGTGGGCAGGCT | + |
Preference number: 4 (lower is better) Translates to: NCAQPEVGICMGNLKLLKGDTTH*KAGGQA Trigger: AGCCTGCCCACCTGCCTTCCAGTGTGTGGTGTCCCC...CTTTAAAAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | GGAGAATTGGCCAAAACTCCTACATCTTTATCCACAGGCAGCAGGAAGAGAGCCGCTTCCGGGAGAACTTaGGGACACCACACACTGGAA | + |
Preference number: 4 (lower is better) Translates to: GELAKTPTSLSTGSRKRAASGRT*GHHTLE Trigger: TTCCAGTGTGTGGTGTCCCCAAGTTCTCCCGGAAGC...GGCTCTCTTCCTGCTGCCTGTGGATAAAGATGTAGGAGTTTTGGCCAATTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | CTGAGGACCAGGGAGGAAAGGTTGCTTGCATTCACTGATCTTCTGTTGGTGACTCAGCATGGCAATCCATaGCATGGTACCCTTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: LRTREERLLAFTDLLLVTQHGNP*HGTLLG Trigger: GCCCAGAAGGGTACCATGCCATGGATTGCCATGCTG...AGTCACCAACAGAAGATCAGTGAATGCAAGCAACCTTTCCTCCCTGGTCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | CCTTTCCTAATGATCAGGACCAAGCTTTCTTACATCAACACTGGGCTCCACGGCCAACATGTGAGGGGCTaGACCTTCAGGCTCAGGTCT | + |
Preference number: 4 (lower is better) Translates to: PFLMIRTKLSYINTGLHGQHVRG*TFRLRS Trigger: AGACCTGAGCCTGAAGGTCCAGCCCCTCACATGTTG...GCCGTGGAGCCCAGTGTTGATGTAAGAAAGCTTGGTCCTGATCATTAGGAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | TTTCTGATGGAGATCCCTGGGATAGCGAGCACTCAGCCTGTGAGAGCTACAGATTCATCTCATCAAAGATaGCGAAGGCCCCACCGCTAT | + |
Preference number: 4 (lower is better) Translates to: FLMEIPGIASTQPVRATDSSHQR*RRPHRY Trigger: ATAGCGGTGGGGCCTTCGTCATCTTTGATGAGATGA...ATCTGTAGCTCTCACAGGCTGAGTGCTCGCTATCCCAGGGATCTCCATCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | CAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTTTGAGTGATGGATCCTGGCCGGGGGTCTaGTCAGTATCGGTGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: QTQRGSQLSIITKILSDGSWPGV*SVSVVS Trigger: GGAGACCACCGATACTGAGCAGACCCCCGGCCAGGA...TCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR GCA 90 bp | AGCACTGGTCAGACCCTATGGGACCTTCCAGATGAGGAGACTGAAGCTCACAGGACTCATAGCTGGCTTTaGATTCAGCATGTGACACCA | + |
Preference number: 4 (lower is better) Translates to: STGQTLWDLPDEETEAHRTHSWL*IQHVTP Trigger: TGGTGTCACATGCTGAATGCAAAGCCAGCTATGAGT...CCTGTGAGCTTCAGTCTCCTCATCTGGAAGGTCCCATAGGGTCTGACCAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | TCACTTTCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGCTCCATACACTTGCTTaGTACCACATTCTTCAGGTC | + |
Preference number: 4 (lower is better) Translates to: SLSRAGGLLCVCVEWQVLLHTLA*YHILQV Trigger: GACCTGAAGAATGTGGTAGCAAGCAAGTGTATGGAG...CAACACCTGCCACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGAAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | GATATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCTTTAGCTCCACGGTATaGGCTGAAACCTCCGGCAGG | + |
Preference number: 4 (lower is better) Translates to: DIGVCFDDSSQFPPHSLSFSSTV*AETSGR Trigger: CCTGCCGGAGGTTTCAGCCCATACCGTGGAGCTAAA...GGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | TGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGGTATTTGAGTGGCCAGGGCACCTCAGGATaGTCTTCAATGTCAAAAATG | + |
Preference number: 4 (lower is better) Translates to: CVEWQVLTPHGALWYLSGQGTSG*SSMSKM Trigger: CATTTTTGACATTGAAGACCATCCTGAGGTGCCCTG...GCCACTCAAATACCAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | GAAGATGGAGCTAGGGACAGAACCCAGGACTCATGGCTCTCTGTCTCTTTCCAATGGGCTACCCAGTGCTaGCTCATCTCATCAAAGATG | + |
Preference number: 4 (lower is better) Translates to: EDGARDRTQDSWLSVSFQWATQC*LISSKM Trigger: CATCTTTGATGAGATGAGCCAGCACTGGGTAGCCCA...TTGGAAAGAGACAGAGAGCCATGAGTCCTGGGTTCTGTCCCTAGCTCCATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CAA 72 bp | AGGGAGGAAAGGTTGCTTGCATTCACTGATCTTCTGTaGGTGACTGACCATACAGCAGGTGTTGGGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: REERLLAFTDLL*VTDHTAGVGLG Trigger: TCCCAGCCCAACACCTGCTGTATGGTCAGTCACCAACAGAAGATCAGTGAATGCAAGCAACCTTTCCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CAA 72 bp | AGAGGCTCAGAGAGAGGAAGAGGCTTGGTTCTAGCTTaGGACTGTACTCTCTTGCCTAGAGATTTCCCCTGC | + |
Preference number: 4 (lower is better) Translates to: RGSERGRGLVLA*DCTLLPRDFPC Trigger: GCAGGGGAAATCTCTAGGCAAGAGAGTACAGTCCAAAGCTAGAACCAAGCCTCTTCCTCTCTCTGAGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | AGTCCCAGGAACAAAAGTGTTTCCAGACAGTGTTCTCTGAGGGACAGCTCGGGCCTCATTGGAGAAATCTaGCCGGAAAGTGACAGACAT | + |
Preference number: 4 (lower is better) Translates to: SPRNKSVSRQCSLRDSSGLIGEI*PESDRH Trigger: ATGTCTGTCACTTTCCGGTCAGATTTCTCCAATGAG...GCCCGAGCTGTCCCTCAGAGAACACTGTCTGGAAACACTTTTGTTCCTGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | AGCCCCAGCAGTAAAGAACCTCAGATAACAGAACTTCATCCCAAAAAGTGTGGCGGGCGTCGAAGCCTGTaGATCGTTCCTCATTGGAGA | + |
Preference number: 4 (lower is better) Translates to: SPSSKEPQITELHPKKCGGRRSL*IVPHWR Trigger: TCTCCAATGAGGAACGATTCACAGGCTTCGACGCCC...GCCACACTTTTTGGGATGAAGTTCTGTTATCTGAGGTTCTTTACTGCTGGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR TCA 90 bp | GATCCAGCCTGGCTGGCTTTGCTACTCTGCCTCTATAAAGACCAGGGAAAGGTGGGTATAGGAACATTCTaGGCTCTTGGGATAAGGGTT | + |
Preference number: 4 (lower is better) Translates to: DPAWLALLLCLYKDQGKVGIGTF*ALGIRV Trigger: AACCCTTATCCCAAGAGCTCAGAATGTTCCTATACC...CACCTTTCCCTGGTCTTTATAGAGGCAGAGTAGCAAAGCCAGCCAGGCTGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | GCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGGGGACCCCATACTTTTaGACCAGCTTTAATCTTAAT | + |
Preference number: 4 (lower is better) Translates to: AALCLCGVAGVDTSWCPLGTPYF*TSFNLN Trigger: ATTAAGATTAAAGCTGGTTCAAAAGTATGGGGTCCC...CAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACAAACACAGAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | ATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCAGGTGTGAGTCTGGGTGCTaGTTGGTTCTGGGGATTTCT | + |
Preference number: 4 (lower is better) Translates to: IGVCFDDSSQFPPHSLSRCESGC*LVLGIS Trigger: AGAAATCCCCAGAACCAATCAGCACCCAGACTCACA...CCTGGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | GCAGGCCACAGCAGCAGTCACTATGACCTGTATAACAGACTGCTCAGCAAGAGCCAGATTTGTATGTGGTaGGGTTGTTTCTGGTGGAGA | + |
Preference number: 4 (lower is better) Translates to: AGHSSSHYDLYNRLLSKSQICMW*GCFWWR Trigger: TCTCCACCAGAAACAACCTCACCACATACAAATCTG...GCTCTTGCTGAGCAGTCTGTTATACAGGTCATAGTGACTGCTGCTGTGGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | AGTCCCAGGAACAAAAGTGTTTCCAGACAGTGTTCTCTGAGGGACAGCTCGGGCCAGATTTGTATGTGGTaGGGTTGTTTCTGGTGGAGA | + |
Preference number: 4 (lower is better) Translates to: SPRNKSVSRQCSLRDSSGQICMW*GCFWWR Trigger: TCTCCACCAGAAACAACCTCACCACATACAAATCTG...GCCCGAGCTGTCCCTCAGAGAACACTGTCTGGAAACACTTTTGTTCCTGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | GATATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCTATCGGTGGTCTCCCTaGCACAAAAGGTTGCCAGCA | + |
Preference number: 4 (lower is better) Translates to: DIGVCFDDSSQFPPHSLSYRWSP*HKRLPA Trigger: TGCTGGCAACCTTTTGTGGCAGGGAGACCACCGATA...GGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | GAAGGGATTGGGTTCTCTGTAAGTAATCCATTCTCAGATGTTGCACTGTGTGGGAAGGAATACACGGCCTaGGAGGGCTCGATTTTCCCG | + |
Preference number: 4 (lower is better) Translates to: EGIGFSVSNPFSDVALCGKEYTA*EGSIFP Trigger: CGGGAAAATCGAGCCCTCGCAGGCCGTGTATTCCTT...CCCACACAGTGCAACATCTGAGAATGGATTACTTACAGAGAACCCAATCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR GCA 90 bp | TTTCTGATGGAGATCCCTGGGATAGCGAGCACTCAGCCTGTGAGAGCTACAGATGATCTTGTTACTCCATaGACCGTCCTTCAGACACTC | + |
Preference number: 4 (lower is better) Translates to: FLMEIPGIASTQPVRATDDLVTP*TVLQTL Trigger: GAGTGTCTGAAGGACGGTGCATGGAGTAACAAGATC...ATCTGTAGCTCTCACAGGCTGAGTGCTCGCTATCCCAGGGATCTCCATCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | ATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCAGGCAAGACACGTATCCTTaGCACCCTCATAGTAGCCAG | + |
Preference number: 4 (lower is better) Translates to: IGVCFDDSSQFPPHSLSRQDTYP*HPHSSQ Trigger: CTGGCTACTATGAGGGTGGCAAGGATACGTGTCTTG...CCTGGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | GAACCCAGGACTCATGGCTCTCTGTCTCTTTCCAATGAGACTCTGTCCCTTGACGGTGCTGATTGGTTCTaGGGATTTCTCTCCACAGAA | + |
Preference number: 4 (lower is better) Translates to: EPRTHGSLSLSNETLSLDGADWF*GFLSTE Trigger: TTCTGTGGAGAGAAATCCCCAGAACCAATCAGCACC...GTCAAGGGACAGAGTCTCATTGGAAAGAGACAGAGAGCCATGAGTCCTGGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CCA 90 bp | GAAGATGGAGCTAGGGACAGAACCCAGGACTCATGGCTCTCTGTCTCTTTCCAAGAACCACTTGTCGTTTaGTACCCTCGATGTGTCTTC | + |
Preference number: 4 (lower is better) Translates to: EDGARDRTQDSWLSVSFQEPLVV*YPRCVF Trigger: GAAGACACATCGAGGGTACCAAACGACAAGTGGTTC...TTGGAAAGAGACAGAGAGCCATGAGTCCTGGGTTCTGTCCCTAGCTCCATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CAA 72 bp | CTCTGTCTCTTTCCAATGAGACTCTGTCCCTTGACCTaGACTCCCAGAACAGCAAGGGATAGATGGGTTGGA | + |
Preference number: 4 (lower is better) Translates to: LCLFPMRLCPLT*TPRTARDRWVG Trigger: TCCAACCCATCTATCCCTTGCTGTTCTGGGAGTCAAGGTCAAGGGACAGAGTCTCATTGGAAAGAGACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | CACTTTCTGAATATGAAAACATCCAGACTCGCCCACATCCACACTCTGTGTCATCGAGCACTTGGTCTTTaGAGGAATACACGGCCTGCG | + |
Preference number: 4 (lower is better) Translates to: HFLNMKTSRLAHIHTLCHRALGL*RNTRPA Trigger: CGCAGGCCGTGTATTCCTTCAAAGACCAAGTGCTCG...ATGACACAGAGTGTGGATGTGGGCGAGTCTGGATGTTTTCATATTCAGAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | CACTTTCTGAATATGAAAACATCCAGACTCGCCCACATCCACACTCTGTGTCATTTTAGCTCCACGGTATaGGCTGAAACCTCCGGCAGG | + |
Preference number: 4 (lower is better) Translates to: HFLNMKTSRLAHIHTLCHFSSTV*AETSGR Trigger: CCTGCCGGAGGTTTCAGCCCATACCGTGGAGCTAAA...ATGACACAGAGTGTGGATGTGGGCGAGTCTGGATGTTTTCATATTCAGAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | CAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTTTGAGTGATGGAGGTACCCTTCTGGGCTaGGCGGCCATTGAAGATCCT | + |
Preference number: 4 (lower is better) Translates to: QTQRGSQLSIITKILSDGGTLLG*AAIEDP Trigger: AGGATCTTCAATGGCCGCCCAGCCCAGAAGGGTACC...TCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | TTTCTGATGGAGATCCCTGGGATAGCGAGCACTCAGCCTGTGAGAGCTACAGATATGTTAAAGTCTGGATaGAGTATCACTCGGGCAGCA | + |
Preference number: 4 (lower is better) Translates to: FLMEIPGIASTQPVRATDMLKSG*SITRAA Trigger: TGCTGCCCGAGTGATACTCCATCCAGACTTTAACAT...ATCTGTAGCTCTCACAGGCTGAGTGCTCGCTATCCCAGGGATCTCCATCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CAA 72 bp | CAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTTaGAGTGATGGAGCCTGGATCCAGCCTGGCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: QRGSQLSIITKI*SDGAWIQPGWL Trigger: AAGCCAGCCAGGCTGGATCCAGGCTCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCTCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CAA 72 bp | GGAAGAGGCTTGGTTCTAGCTTTGGACTGTACTCTCTaGCCTAGAGATTTCCCCTGCATATTGCTAACCCCA | + |
Preference number: 4 (lower is better) Translates to: GRGLVLALDCTL*PRDFPCILLTP Trigger: TGGGGTTAGCAATATGCAGGGGAAATCTCTAGGCAAGAGAGTACAGTCCAAAGCTAGAACCAAGCCTCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | ATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCAGGGGTATAGGAACATTCTaGGCTCTTGGGATAAGGGTT | + |
Preference number: 4 (lower is better) Translates to: IGVCFDDSSQFPPHSLSRGIGTF*ALGIRV Trigger: AACCCTTATCCCAAGAGCTCAGAATGTTCCTATACC...CCTGGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | GAAGGGATTGGGTTCTCTGTAAGTAATCCATTCTCAGATGTTGCACTGTGTGGGTGTGAGTCTGGGTGCTaGTTGGTTCTGGGGATTTCT | + |
Preference number: 4 (lower is better) Translates to: EGIGFSVSNPFSDVALCGCESGC*LVLGIS Trigger: AGAAATCCCCAGAACCAATCAGCACCCAGACTCACA...CCCACACAGTGCAACATCTGAGAATGGATTACTTACAGAGAACCCAATCCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR TCA 90 bp | AATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTTAAAGTTGTCCGTTCAGGTGTaGCAGCATGGCAATCCATGG | + |
Preference number: 4 (lower is better) Translates to: NCAQPEVGICMGNLKLLKLSVQV*QHGNPW Trigger: CCATGGATTGCCATGCTGTCACACCTGAACGGACAA...CTTTAAAAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | CTCAGCATCCATTCTAATCCACACTCAAGTGGGCAATGGAGTGTTGGTGGGTGGGGGACCCCATACTTTTaGACCAGCTTTAATCTTAAT | + |
Preference number: 4 (lower is better) Translates to: LSIHSNPHSSGQWSVGGWGTPYF*TSFNLN Trigger: ATTAAGATTAAAGCTGGTTCAAAAGTATGGGGTCCC...CCACCCACCAACACTCCATTGCCCACTTGAGTGTGGATTAGAATGGATGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR TCA 90 bp | ACATCCACACTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACAAGGATCTGGACACTGTaGGTCTGGGTGCTGATTGGT | + |
Preference number: 4 (lower is better) Translates to: TSTLCVIIQSINPWLLGTRIWTL*VWVLIG Trigger: ACCAATCAGCACCCAGACTCACAGTGTCCAGATCCT...TGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAGTGTGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR GCA 90 bp | GAACCTCAGATAACAGAACTTCATCCCAAAAAGTGTGGCTGGGACATACACTTTCCTGCCACAAAAGGTTaGCAGCACCTGGTCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: EPQITELHPKKCGWDIHFPATKG*QHLVFC Trigger: ACAGAAGACCAGGTGCTGGCAACCTTTTGTGGCAGG...AAAGTGTATGTCCCAGCCACACTTTTTGGGATGAAGTTCTGTTATCTGAGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | ACATCCACACTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATCTGCTCAGTATCGGTaGTCTCCCTGCCACAAAAGG | + |
Preference number: 4 (lower is better) Translates to: TSTLCVIIQSINPWLLGTSAQYR*SPCHKR Trigger: CCTTTTGTGGCAGGGAGACCACCGATACTGAGCAGA...TGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAGTGTGGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | GAAGGGATTGGGTTCTCTGTAAGTAATCCATTCTCAGATGTTGCACTGTGTGGGGGTGCTGATTGGTTCTaGGGATTTCTCTCCACAGAA | + |
Preference number: 4 (lower is better) Translates to: EGIGFSVSNPFSDVALCGGADWF*GFLSTE Trigger: TTCTGTGGAGAGAAATCCCCAGAACCAATCAGCACC...CCCACACAGTGCAACATCTGAGAATGGATTACTTACAGAGAACCCAATCCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | ATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCAGGTTCAGACACTCAATTTaGAATGTGTCCATCACCTCG | + |
Preference number: 4 (lower is better) Translates to: IGVCFDDSSQFPPHSLSRFRHSI*NVSITS Trigger: CGAGGTGATGGACACATTCCAAATTGAGTGTCTGAA...CCTGGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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3UTR CAA 72 bp | AGAACAGCAAGGGATAGATGGGTTGGAGTATGCTACTaGGTATATTCTCTACTGAGCTCAGGCTCTGGGTTG | + |
Preference number: 4 (lower is better) Translates to: RTARDRWVGVCY*VYSLLSSGSGL Trigger: CAACCCAGAGCCTGAGCTCAGTAGAGAATATACCAAGTAGCATACTCCAACCCATCTATCCCTTGCTGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR GCA 90 bp | ATGGTTGAAGAACAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTCCTGCCACAAAAGGTTaGCAGCACCTGGTCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: MVEEQTQRGSQLSIITKIPATKG*QHLVFC Trigger: ACAGAAGACCAGGTGCTGGCAACCTTTTGTGGCAGG...AATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTGTTCTTCAACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | ATGGTTGAAGAACAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTACCCCAGTGATCCTCTaGATCCAGTCCTTGTTGGGA | + |
Preference number: 4 (lower is better) Translates to: MVEEQTQRGSQLSIITKITPVIL*IQSLLG Trigger: TCCCAACAAGGACTGGATCCAGAGGATCACTGGGGT...AATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTGTTCTTCAACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CAA 72 bp | CTCTATTTAGAGCAAGGGGAAGATCTTTGGCTGCACTaGAGTATGGTGGATCACTGTGGGAATTTTAGGGAC | + |
Preference number: 4 (lower is better) Translates to: LYLEQGEDLWLH*SMVDHCGNFRD Trigger: GTCCCTAAAATTCCCACAGTGATCCACCATACTCAAGTGCAGCCAAAGATCTTCCCCTTGCTCTAAATAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR GCA 90 bp | CCAGAGATTTTTATGGAAACTAGCAGCAGCAATACAGGTCGAGGGTCAAAGTCTAAAATGTCCTCAAACTaGAGGCTGACCATGAAGCCT | + |
Preference number: 4 (lower is better) Translates to: PEIFMETSSSNTGRGSKSKMSSN*RLTMKP Trigger: AGGCTTCATGGTCAGCCTGCAGTTTGAGGACATTTT...AGACTTTGACCCTCGACCTGTATTGCTGCTGCTAGTTTCCATAAAAATCTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR GCA 90 bp | CATTGCCTCCAAGCAGTTTCAAAACTGCATCAAAAGTCTTCATCAGGAACTAAATTTACATGCAGGTGCTaGTCGTCTTCGTCTGAGCGC | + |
Preference number: 4 (lower is better) Translates to: HCLQAVSKLHQKSSSGTKFTCRC*SSSSER Trigger: GCGCTCAGACGAAGACGAGCAGCACCTGCATGTAAA...TTTAGTTCCTGATGAAGACTTTTGATGCAGTTTTGAAACTGCTTGGAGGCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR GCA 90 bp | CACTCCTGTACGGTGACATCTGATCTTTTCAAATATCAACACTCTCTAGTGACCCCATTGGTCTCTCTCTaGATCTTTGGTCACCATAGG | + |
Preference number: 4 (lower is better) Translates to: HSCTVTSDLFKYQHSLVTPLVSL*IFGHHR Trigger: CCTATGGTGACCAAAGATGCAGAGAGAGACCAATGG...GGTCACTAGAGAGTGTTGATATTTGAAAAGATCAGATGTCACCGTACAGGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | CACATCCACACTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACCAGGGCACCTCAGGATaGTCTTCAATGTCAAAAATG | + |
Preference number: 4 (lower is better) Translates to: HIHTLCHHSVYKPMVVRDQGTSG*SSMSKM Trigger: CATTTTTGACATTGAAGACCATCCTGAGGTGCCCTG...GTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAGTGTGGATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | ATGGTTGAAGAACAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTAGTCTGGGTGCTGATTaGTTCTGGGGATTTCTCTCC | + |
Preference number: 4 (lower is better) Translates to: MVEEQTQRGSQLSIITKISLGAD*FWGFLS Trigger: GGAGAGAAATCCCCAGAACCAATCAGCACCCAGACT...AATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTGTTCTTCAACCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | CATTCAGTCTATAAACCCATGGTTGTTAAGACAGCAGTAGAAGCCAGAGATTTGAGTCTGGGTGCTGATTaGTTCTGGGGATTTCTCTCC | + |
Preference number: 4 (lower is better) Translates to: HSVYKPMVVKTAVEARDLSLGAD*FWGFLS Trigger: GGAGAGAAATCCCCAGAACCAATCAGCACCCAGACT...CAAATCTCTGGCTTCTACTGCTGTCTTAACAACCATGGGTTTATAGACTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | TCCACACTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATACCAGCTGACGAGCACTTaGTCTTTGAAGGAATACACG | + |
Preference number: 4 (lower is better) Translates to: STLCVIIQSINPWLLGTYQLTST*SLKEYT Trigger: CGTGTATTCCTTCAAAGACCAAGTGCTCGTCAGCTG...GTATGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAGTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | GAAGGGATTGGGTTCTCTGTAAGTAATCCATTCTCAGATGTTGCACTGTGTGGGTTCAGACACTCAATTTaGAATGTGTCCATCACCTCG | + |
Preference number: 4 (lower is better) Translates to: EGIGFSVSNPFSDVALCGFRHSI*NVSITS Trigger: CGAGGTGATGGACACATTCCAAATTGAGTGTCTGAA...CCCACACAGTGCAACATCTGAGAATGGATTACTTACAGAGAACCCAATCCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | TTCAAACACAGTGTTCTCAGTTTGGTGAGACAAAGCGACAGGAATCAGAGAAATTCAGGTGTGACAGCATaGCAATCCATGGCATGGTAC | + |
Preference number: 4 (lower is better) Translates to: FKHSVLSLVRQSDRNQRNSGVTA*QSMAWY Trigger: GTACCATGCCATGGATTGCCATGCTGTCACACCTGA...ATTTCTCTGATTCCTGTCGCTTTGTCTCACCAAACTGAGAACACTGTGTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | CAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTTTGAGTGATGGACACTTTCTTCTTCAATaGGGTATAGGCCTCCTGGCA | + |
Preference number: 4 (lower is better) Translates to: QTQRGSQLSIITKILSDGHFLLQ*GIGLLA Trigger: TGCCAGGAGGCCTATACCCCATTGAAGAAGAAAGTG...TCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CAA 72 bp | GCATTTAAATGGGGCTGGCTTACAGTTTCAGAGGTTTaGCCCATTTTTATCATGGCAAGAGCATGGTGGCAT | + |
Preference number: 4 (lower is better) Translates to: AFKWGWLTVSEV*PIFIMARAWWH Trigger: ATGCCACCATGCTCTTGCCATGATAAAAATGGGCAAAACCTCTGAAACTGTAAGCCAGCCCCATTTAAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | ATGGTTGAAGAACAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTCCAGGTGACTGGATCTaGCCAAACATTTCGTTTAGC | + |
Preference number: 4 (lower is better) Translates to: MVEEQTQRGSQLSIITKIPGDWI*PNISFS Trigger: GCTAAACGAAATGTTTGGTCAGATCCAGTCACCTGG...AATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTGTTCTTCAACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | CTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATACACTTTCCCAGGTGACTGGATCTaGCCAAACATTTCGTTTAGC | + |
Preference number: 4 (lower is better) Translates to: LCVIIQSINPWLLGTYTFPGDWI*PNISFS Trigger: GCTAAACGAAATGTTTGGTCAGATCCAGTCACCTGG...GAAAGTGTATGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR TCA 90 bp | ATCATGTCACAGGCATTTATAGGACAAGGTTCAAGTTCCATGGTATATTTAGTTGGGCGTCGAAGCCTGTaGATCGTTCCTCATTGGAGA | + |
Preference number: 4 (lower is better) Translates to: IMSQAFIGQGSSSMVYLVGRRSL*IVPHWR Trigger: TCTCCAATGAGGAACGATTCACAGGCTTCGACGCCC...AACTAAATATACCATGGAACTTGAACCTTGTCCTATAAATGCCTGTGACATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | ACATCCACACTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACAGGTATAGGAACATTCTaGGCTCTTGGGATAAGGGTT | + |
Preference number: 4 (lower is better) Translates to: TSTLCVIIQSINPWLLGTGIGTF*ALGIRV Trigger: AACCCTTATCCCAAGAGCTCAGAATGTTCCTATACC...TGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAGTGTGGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR GCA 90 bp | CATTCAGTCTATAAACCCATGGTTGTTAAGACAGCAGTAGAAGCCAGAGATTTGGATCTTGTTACTCCATaGACCGTCCTTCAGACACTC | + |
Preference number: 4 (lower is better) Translates to: HSVYKPMVVKTAVEARDLDLVTP*TVLQTL Trigger: GAGTGTCTGAAGGACGGTGCATGGAGTAACAAGATC...CAAATCTCTGGCTTCTACTGCTGTCTTAACAACCATGGGTTTATAGACTGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | ATGGTTGAAGAACAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTAAGGTTGCCAGCACCTaGTCTTCTGTTTCTACCTTC | + |
Preference number: 4 (lower is better) Translates to: MVEEQTQRGSQLSIITKIKVAST*SSVSTF Trigger: GAAGGTAGAAACAGAAGACCAGGTGCTGGCAACCTT...AATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTGTTCTTCAACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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3UTR CAA 72 bp | TACTTGGTATATTCTCTACTGAGCTCAGGCTCTGGGTaGAGCATAGTCTCAAATATTAGAGTGACCTGGCAA | + |
Preference number: 4 (lower is better) Translates to: YLVYSLLSSGSG*SIVSNIRVTWQ Trigger: TTGCCAGGTCACTCTAATATTTGAGACTATGCTCAACCCAGAGCCTGAGCTCAGTAGAGAATATACCAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR TCA 90 bp | CTTCCTTCTGTGTCTCTAGTTTTAGGTGATCAGGCTTCTTGGACCATAATAGAACTCATTGGAGAAATCTaGCCGGAAAGTGACAGACAT | + |
Preference number: 4 (lower is better) Translates to: LPSVSLVLGDQASWTIIELIGEI*PESDRH Trigger: ATGTCTGTCACTTTCCGGTCAGATTTCTCCAATGAG...TTCTATTATGGTCCAAGAAGCCTGATCACCTAAAACTAGAGACACAGAAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR TCA 90 bp | CCAGAGATTTTTATGGAAACTAGCAGCAGCAATACAGGTCGAGGGTCAAAGTCTGGGACCCCATACTTTTaGACCAGCTTTAATCTTAAT | + |
Preference number: 4 (lower is better) Translates to: PEIFMETSSSNTGRGSKSGTPYF*TSFNLN Trigger: ATTAAGATTAAAGCTGGTTCAAAAGTATGGGGTCCC...AGACTTTGACCCTCGACCTGTATTGCTGCTGCTAGTTTCCATAAAAATCTCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR GCA 90 bp | ATCCACACTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATAAAAATGTCCTCAAACTaGAGGCTGACCATGAAGCCT | + |
Preference number: 4 (lower is better) Translates to: IHTLCHHSVYKPMVVRDIKMSSN*RLTMKP Trigger: AGGCTTCATGGTCAGCCTGCAGTTTGAGGACATTTT...TATGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAGTGTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CCA 90 bp | CTTCCTTCTGTGTCTCTAGTTTTAGGTGATCAGGCTTCTTGGACCATAATAGAACAGGGCACCTCAGGATaGTCTTCAATGTCAAAAATG | + |
Preference number: 4 (lower is better) Translates to: LPSVSLVLGDQASWTIIEQGTSG*SSMSKM Trigger: CATTTTTGACATTGAAGACCATCCTGAGGTGCCCTG...TTCTATTATGGTCCAAGAAGCCTGATCACCTAAAACTAGAGACACAGAAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | CATTGCCTCCAAGCAGTTTCAAAACTGCATCAAAAGTCTTCATCAGGAACTAAAGGTGCTGATTGGTTCTaGGGATTTCTCTCCACAGAA | + |
Preference number: 4 (lower is better) Translates to: HCLQAVSKLHQKSSSGTKGADWF*GFLSTE Trigger: TTCTGTGGAGAGAAATCCCCAGAACCAATCAGCACC...TTTAGTTCCTGATGAAGACTTTTGATGCAGTTTTGAAACTGCTTGGAGGCAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | CACTCCTGTACGGTGACATCTGATCTTTTCAAATATCAACACTCTCTAGTGACCTTCAGACACTCAATTTaGAATGTGTCCATCACCTCG | + |
Preference number: 4 (lower is better) Translates to: HSCTVTSDLFKYQHSLVTFRHSI*NVSITS Trigger: CGAGGTGATGGACACATTCCAAATTGAGTGTCTGAA...GGTCACTAGAGAGTGTTGATATTTGAAAAGATCAGATGTCACCGTACAGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | CAAATATCAACACTCTCTAGTGACCAAGCATACAAATATGTGAGCCTGTGGGGGCTACAATTTTACAGGTaGGGATCTTGTTACTCCATG | + |
Preference number: 4 (lower is better) Translates to: QISTLSSDQAYKYVSLWGLQFYR*GSCYSM Trigger: CATGGAGTAACAAGATCCCCACCTGTAAAATTGTAG...CCCCCACAGGCTCACATATTTGTATGCTTGGTCACTAGAGAGTGTTGATATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | CAAATATCAACACTCTCTAGTGACCAAGCATACAAATATGTGAGCCTGTGGGGGGGATCCAGTCCTTGTTaGGATAGATGTAAGAATAGA | + |
Preference number: 4 (lower is better) Translates to: QISTLSSDQAYKYVSLWGGSSPC*DRCKNR Trigger: TCTATTCTTACATCTATCCCAACAAGGACTGGATCC...CCCCCACAGGCTCACATATTTGTATGCTTGGTCACTAGAGAGTGTTGATATTTG 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CCA 90 bp | ATGGTTGAAGAACAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTGTCAGAGTTTACAATTaGGATTTCAATCTCCATCAG | + |
Preference number: 4 (lower is better) Translates to: MVEEQTQRGSQLSIITKIVRVYN*DFNLHQ Trigger: CTGATGGAGATTGAAATCCCAATTGTAAACTCTGAC...AATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTGTTCTTCAACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS TCA 90 bp | GGGCCTGCCATGGGAAGAGGCCAAGCTCAGCATTGCGACCTCCGATaGTTCTCTTCACCAGGTTTGGCAGGGCGCGGGAGGGCTGTCCAC | + |
Preference number: 5 (lower is better) Translates to: GPAMGRGQAQHCDLR*FSSPGLAGRGRAVH Trigger: GTGGACAGCCCTCCCGCGCCCTGCCAAACCTGGTGAAGAGAATCATCGGAGGTCGCAATGCTGAGCTTGGCCTCTTCCCATGGCAGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CCA 90 bp | GCCAAGCTCAGCATTGCGACCTCCGATGATTCTCTTCACCAGGTTTaGCAGGGCGCGGGAGGGCTGTCCACACACTGGAAGGCAGGTGGG | + |
Preference number: 5 (lower is better) Translates to: AKLSIATSDDSLHQV*QGAGGLSTHWKAGG Trigger: CCCACCTGCCTTCCAGTGTGTGGACAGCCCTCCCGCGCCCTGCCAAACCTGGTGAAGAGAATCATCGGAGGTCGCAATGCTGAGCTTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS GCA 90 bp | GACATGAAGGTGCCAGGCGAAAGAACCACTTCCTGGCCGGGGGTCTaGTCAGTATCGGTGGTCTCCCTGCCACAAAAGGTTGCCAGCACC | + |
Preference number: 5 (lower is better) Translates to: DMKVPGERTTSWPGV*SVSVVSLPQKVAST Trigger: GGTGCTGGCAACCTTTTGTGGCAGGGAGACCACCGATACTGAGCAGACCCCCGGCCAGGAAGTGGTTCTTTCGCCTGGCACCTTCATGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | CAGTGGGGCAGTCTTCTCTTTCTTCAAGTAGTCTCCATACACGTGGCTGGGGGCCCAGGACACCAGGCCTaGGGCTACCCAGTGCTGGCT | + |
Preference number: 5 (lower is better) Translates to: QWGSLLFLQVVSIHVAGGPGHQA*GYPVLA Trigger: AGCCAGCACTGGGTAGCCCAAGGCCTGGTGTCCTGG...GCCCCCAGCCACGTGTATGGAGACTACTTGAAGAAAGAGAAGACTGCCCCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS TCA 90 bp | GCATGGCAATCCATGGCATGGTACCCTTCTGGGCTGGGCGGCCATTaGAGATCCTGGAGATCTGCTTCCGGGAGAACTTGGGGACACCAC | + |
Preference number: 5 (lower is better) Translates to: AWQSMAWYPSGLGGH*RSWRSASGRTWGHH Trigger: GTGGTGTCCCCAAGTTCTCCCGGAAGCAGATCTCCAGGATCTTCAATGGCCGCCCAGCCCAGAAGGGTACCATGCCATGGATTGCCATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS GCA 90 bp | ATGGTACCCTTCTGGGCTGGGCGGCCATTGAAGATCCTGGAGATCTaGTTCCGGGAGAACTTGGGGACACCACACACTGGAAGGCAGGTG | + |
Preference number: 5 (lower is better) Translates to: MVPFWAGRPLKILEI*FRENLGTPHTGRQV Trigger: CACCTGCCTTCCAGTGTGTGGTGTCCCCAAGTTCTCCCGGAAGCAGATCTCCAGGATCTTCAATGGCCGCCCAGCCCAGAAGGGTACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS GCA 90 bp | CATTCTTCAGGTCCTCCCCAGGACACCAGGCCTTGGGCTACCCAGTaGTGGCTCATCTCATCAAAGATGACGAAGGCCCCACCGCTATCC | + |
Preference number: 5 (lower is better) Translates to: HSSGPPQDTRPWATQ*WLISSKMTKAPPLS Trigger: GGATAGCGGTGGGGCCTTCGTCATCTTTGATGAGATGAGCCAGCACTGGGTAGCCCAAGGCCTGGTGTCCTGGGGAGGACCTGAAGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CCA 90 bp | CCGTTCAGGTGTGACAGCATGGCAATCCATGGCATGGTACCCTTCTaGGCTGGGCGGCCATTGAAGATCCTGGAGATCTGCTTCCGGGAG | + |
Preference number: 5 (lower is better) Translates to: PFRCDSMAIHGMVPF*AGRPLKILEICFRE Trigger: CTCCCGGAAGCAGATCTCCAGGATCTTCAATGGCCGCCCAGCCCAGAAGGGTACCATGCCATGGATTGCCATGCTGTCACACCTGAACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | AGGAGCCTGCCAGGGCCTGCCTTCTGCTGCCCATGCTTAGAGGCGAGAAGGGGGTCATCTTCCCTCTCCTaGCACTCATCCACATCTACA | + |
Preference number: 5 (lower is better) Translates to: RSLPGPAFCCPCLEARRGSSSLS*HSSTST Trigger: TGTAGATGTGGATGAGTGCAAGGAGAGGGAAGATGA...CCCCCTTCTCGCCTCTAAGCATGGGCAGCAGAAGGCAGGCCCTGGCAGGCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS TCA 90 bp | ACACCAGGCCTTGGGCTACCCAGTGCTGGCTCATCTCATCAAAGATaGCGAAGGCCCCACCGCTATCCCCAAGACACGTATCCTTGCCAC | + |
Preference number: 5 (lower is better) Translates to: TPGLGLPSAGSSHQR*RRPHRYPQDTYPCH Trigger: GTGGCAAGGATACGTGTCTTGGGGATAGCGGTGGGGCCTTCGTCATCTTTGATGAGATGAGCCAGCACTGGGTAGCCCAAGGCCTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS GCA 90 bp | AGGTATGACTGTGTTGTCTCTGCGCTGGGAACGCAGAACATGGGCTaGTGTGAGTATCCAGGACTCAGAGAGCAGGGCCCCACTCCCGAA | + |
Preference number: 5 (lower is better) Translates to: RYDCVVSALGTQNMG*CEYPGLREQGPTPE Trigger: TTCGGGAGTGGGGCCCTGCTCTCTGAGTCCTGGATACTCACAGCAGCCCATGTTCTGCGTTCCCAGCGCAGAGACAACACAGTCATACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CCA 90 bp | CAGGCGAAAGAACCACTTCCTGGCCGGGGGTCTGCTCAGTATCGGTaGTCTCCCTGCCACAAAAGGTTGCCAGCACCTGGTCTTCTGTTT | + |
Preference number: 5 (lower is better) Translates to: QAKEPLPGRGSAQYR*SPCHKRLPAPGLLF Trigger: AAACAGAAGACCAGGTGCTGGCAACCTTTTGTGGCAGGGAGACCACCGATACTGAGCAGACCCCCGGCCAGGAAGTGGTTCTTTCGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS CCA 90 bp | CGGAAAGTGACAGACATGAAGGTGCCAGGCGAAAGAACCACTTCCTaGCCGGGGGTCTGCTCAGTATCGGTGGTCTCCCTGCCACAAAAG | + |
Preference number: 5 (lower is better) Translates to: RKVTDMKVPGERTTS*PGVCSVSVVSLPQK Trigger: CTTTTGTGGCAGGGAGACCACCGATACTGAGCAGACCCCCGGCCAGGAAGTGGTTCTTTCGCCTGGCACCTTCATGTCTGTCACTTTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | AGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGATGCGGAGAGCGACCCTGCCACAAAAGGTaGCCAGCACCTGGTCTTCTG | + |
Preference number: 5 (lower is better) Translates to: RNGNLSSAGMQRAGCGERPCHKR*PAPGLL Trigger: CAGAAGACCAGGTGCTGGCAACCTTTTGTGGCAGGG...TCGCTCTCCGCATCCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | GGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGATGCGGAGAGCGAGAAGGATTACAGGTGGGGATCTaGTTACTCCATGCACCGTCC | + |
Preference number: 5 (lower is better) Translates to: GNLSSAGMQRAGCGEREGLQVGI*LLHAPS Trigger: GGACGGTGCATGGAGTAACAAGATCCCCACCTGTAA...TCCTTCTCGCTCTCCGCATCCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS TCA 90 bp | GGGAGGGCTGTCCACACACTGGAAGGCAGGTGGGCAGGCTTCTCTTaGGCACTTCGTTCGTCCAGGTCCCATGAGCAGAACACGTATATA | + |
Preference number: 5 (lower is better) Translates to: GRAVHTLEGRWAGFS*ALRSSRSHEQNTYI Trigger: TATATACGTGTTCTGCTCATGGGACCTGGACGAACGAAGTGCTCAAGAGAAGCCTGCCCACCTGCCTTCCAGTGTGTGGACAGCCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS TCA 90 bp | CGAACCACTTGTCGTTTGGTACCCTCGATGTGTCTTCCACCACTATaGGGGCCTGCCATGGGAAGAGGCCAAGCTCAGCATTGCGACCTC | + |
Preference number: 5 (lower is better) Translates to: RTTCRLVPSMCLPPL*GPAMGRGQAQHCDL Trigger: GAGGTCGCAATGCTGAGCTTGGCCTCTTCCCATGGCAGGCCCTCATAGTGGTGGAAGACACATCGAGGGTACCAAACGACAAGTGGTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS GCA 90 bp | GAACCACTTCCTGGCCGGGGGTCTGCTCAGTATCGGTGGTCTCCCTaGCACAAAAGGTTGCCAGCACCTGGTCTTCTGTTTCTACCTTCA | + |
Preference number: 5 (lower is better) Translates to: EPLPGRGSAQYRWSP*HKRLPAPGLLFLPS Trigger: TGAAGGTAGAAACAGAAGACCAGGTGCTGGCAACCTTTTGTGGCAGGGAGACCACCGATACTGAGCAGACCCCCGGCCAGGAAGTGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | CAGTGGGGCAGTCTTCTCTTTCTTCAAGTAGTCTCCATACACGTGGCTGGGGGCCCCTGCCACAAAAGGTaGCCAGCACCTGGTCTTCTG | + |
Preference number: 5 (lower is better) Translates to: QWGSLLFLQVVSIHVAGGPCHKR*PAPGLL Trigger: CAGAAGACCAGGTGCTGGCAACCTTTTGTGGCAGGG...GCCCCCAGCCACGTGTATGGAGACTACTTGAAGAAAGAGAAGACTGCCCCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | CGACAGGAATCAGAGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGTCAAACGTGCTGGGGTaGTACAGTGGGTGGAGCGTG | + |
Preference number: 5 (lower is better) Translates to: RQESEKWQPKLSWDAESGSNVLG*YSGWSV Trigger: CACGCTCCACCCACTGTACAACCCCAGCACGTTTGA...CCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCTCTGATTCCTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | GAAGATGGAGCTAGGGACAGAACCCAGGACTCATGGCTCTCTGTCTCTTTCCAATTCTCTTCACCAGGTTaGGCAGGGCGCGGGAGGGCT | + |
Preference number: 5 (lower is better) Translates to: EDGARDRTQDSWLSVSFQFSSPG*AGRGRA Trigger: AGCCCTCCCGCGCCCTGCCAAACCTGGTGAAGAGAA...TTGGAAAGAGACAGAGAGCCATGAGTCCTGGGTTCTGTCCCTAGCTCCATCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS TCA 90 bp | AGGCAGACAGACAGGCATCACAAAGTCGTTCAGCCTCGGGCTCTCTaGCAGTTCCACCAGACCAAGGTCGTTCTCAAACGTGCTGGGGTT | + |
Preference number: 5 (lower is better) Translates to: RQTDRHHKVVQPRAL*QFHQTKVVLKRAGV Trigger: AACCCCAGCACGTTTGAGAACGACCTTGGTCTGGTGGAACTGTCAGAGAGCCCGAGGCTGAACGACTTTGTGATGCCTGTCTGTCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS GCA 90 bp | GTGTCACAGCTGACGAGCACTTGGTCTTTGAAGGAATACACGGCCTaGGAGGGCTCGATTTTCCCGTACACAGGAGGCTGTAGCTTTGGG | + |
Preference number: 5 (lower is better) Translates to: VSQLTSTWSLKEYTA*EGSIFPYTGGCSFG Trigger: CCCAAAGCTACAGCCTCCTGTGTACGGGAAAATCGAGCCCTCGCAGGCCGTGTATTCCTTCAAAGACCAAGTGCTCGTCAGCTGTGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | CGACAGGAATCAGAGAAATGGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGCGGTTCTCTCCTGAGTaGTCGCTGCGGAATAGGATC | + |
Preference number: 5 (lower is better) Translates to: RQESEKWQPKLSWDAESGRFSPE*SLRNRI Trigger: GATCCTATTCCGCAGCGACAACTCAGGAGAGAACCG...CCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCCATTTCTCTGATTCCTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | CAGTGGGGCAGTCTTCTCTTTCTTCAAGTAGTCTCCATACACGTGGCTGGGGGCCGGGCAGCAGAGCTATaGACAGCTCCTGATTTGTCC | + |
Preference number: 5 (lower is better) Translates to: QWGSLLFLQVVSIHVAGGRAAEL*TAPDLS Trigger: GGACAAATCAGGAGCTGTCAATAGCTCTGCTGCCCG...GCCCCCAGCCACGTGTATGGAGACTACTTGAAGAAAGAGAAGACTGCCCCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS TCA 90 bp | ACTTGGGGACACCACACACTGGAAGGCAGGTGGGCAGGCTTCTCTTaGGCACTTCGTTCGTCCAGGTCCCATGAGCAGAACACGTATATA | + |
Preference number: 5 (lower is better) Translates to: TWGHHTLEGRWAGFS*ALRSSRSHEQNTYI Trigger: TATATACGTGTTCTGCTCATGGGACCTGGACGAACGAAGTGCTCAAGAGAAGCCTGCCCACCTGCCTTCCAGTGTGTGGTGTCCCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS GCA 90 bp | GCCGGGGGTCTGCTCAGTATCGGTGGTCTCCCTGCCACAAAAGGTTaGCAGCACCTGGTCTTCTGTTTCTACCTTCACATAGTCGTATTC | + |
Preference number: 5 (lower is better) Translates to: AGGLLSIGGLPATKG*QHLVFCFYLHIVVF Trigger: GAATACGACTATGTGAAGGTAGAAACAGAAGACCAGGTGCTGGCAACCTTTTGTGGCAGGGAGACCACCGATACTGAGCAGACCCCCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS GCA 90 bp | TTGTCGTTTGGTACCCTCGATGTGTCTTCCACCACTATGAGGGCCTaGCATGGGAAGAGGCCAAGCTCAGCATTGCGACCTCCGATGATT | + |
Preference number: 5 (lower is better) Translates to: LSFGTLDVSSTTMRA*HGKRPSSALRPPMI Trigger: AATCATCGGAGGTCGCAATGCTGAGCTTGGCCTCTTCCCATGGCAGGCCCTCATAGTGGTGGAAGACACATCGAGGGTACCAAACGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CCA 90 bp | GTTTGGTACCCTCGATGTGTCTTCCACCACTATGAGGGCCTGCCATaGGAAGAGGCCAAGCTCAGCATTGCGACCTCCGATGATTCTCTT | + |
Preference number: 5 (lower is better) Translates to: VWYPRCVFHHYEGLP*EEAKLSIATSDDSL Trigger: AAGAGAATCATCGGAGGTCGCAATGCTGAGCTTGGCCTCTTCCCATGGCAGGCCCTCATAGTGGTGGAAGACACATCGAGGGTACCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | AGTCTCCATACACGTGGCTGGGGGCAGGTCACTTTCCAGAGCTGGAGGGCTGCTGTGAATCGTTCCTCATaGGAGAAATCTGACCGGAAA | + |
Preference number: 5 (lower is better) Translates to: SLHTRGWGQVTFQSWRAAVNRSS*EKSDRK Trigger: TTTCCGGTCAGATTTCTCCAATGAGGAACGATTCAC...AGCAGCCCTCCAGCTCTGGAAAGTGACCTGCCCCCAGCCACGTGTATGGAGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | GAATTCAGGGCAGTGCCCATTGAGAGCACTGGTCAGACCCTATGGGACCTTCCAACGAGCACTTGGTCTTaGAAGGAATACACGGCCTGC | + |
Preference number: 5 (lower is better) Translates to: EFRAVPIESTGQTLWDLPTSTWS*KEYTAC Trigger: GCAGGCCGTGTATTCCTTCAAAGACCAAGTGCTCGT...TGGAAGGTCCCATAGGGTCTGACCAGTGCTCTCAATGGGCACTGCCCTGAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | GGCAACCTAAGCTCAGCTGGGATGCAGAGAGCGGGATGCGGAGAGCGAGAAGGACTTCAGACACTCAATTaGGAATGTGTCCATCACCTC | + |
Preference number: 5 (lower is better) Translates to: GNLSSAGMQRAGCGEREGLQTLN*ECVHHL Trigger: GAGGTGATGGACACATTCCAAATTGAGTGTCTGAAG...TCCTTCTCGCTCTCCGCATCCCGCTCTCTGCATCCCAGCTGAGCTTAGGTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | GCACTGGTCAGACCCTATGGGACCTTCCAGATGAGGAGACTGAAGCTCACAGGATTACAGGTGGGGATCTaGTTACTCCATGCACCGTCC | + |
Preference number: 5 (lower is better) Translates to: ALVRPYGTFQMRRLKLTGLQVGI*LLHAPS Trigger: GGACGGTGCATGGAGTAACAAGATCCCCACCTGTAA...TCCTGTGAGCTTCAGTCTCCTCATCTGGAAGGTCCCATAGGGTCTGACCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | GGCTCCAAGCCTTCTGGAAACTCCGCCCCTACTGGAGAGGAGAGGCTCAGAGAGTTGTATGTGGTGAGGTaGTTTCTGGTGGAGAAGGTT | + |
Preference number: 5 (lower is better) Translates to: GSKPSGNSAPTGEERLRELYVVR*FLVEKV Trigger: AACCTTCTCCACCAGAAACAACCTCACCACATACAA...CTCTCTGAGCCTCTCCTCTCCAGTAGGGGCGGAGTTTCCAGAAGGCTTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS TCA 90 bp | CGGTTCTCTCCTGAGTTGTCGCTGCGGAATAGGATCTGGACACTGTaGGTCTGGGTGCTGATTGGTTCTGGGGATTTCTCTCCACAGAAG | + |
Preference number: 5 (lower is better) Translates to: RFSPELSLRNRIWTL*VWVLIGSGDFSPQK Trigger: CTTCTGTGGAGAGAAATCCCCAGAACCAATCAGCACCCAGACTCACAGTGTCCAGATCCTATTCCGCAGCGACAACTCAGGAGAGAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS CCA 90 bp | GTGACATGTTCCTTCGAGACAGGTATGACTGTGTTGTCTCTGCGCTaGGAACGCAGAACATGGGCTGCTGTGAGTATCCAGGACTCAGAG | + |
Preference number: 5 (lower is better) Translates to: VTCSFETGMTVLSLR*ERRTWAAVSIQDSE Trigger: CTCTGAGTCCTGGATACTCACAGCAGCCCATGTTCTGCGTTCCCAGCGCAGAGACAACACAGTCATACCTGTCTCGAAGGAACATGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | TTTCTGATGGAGATCCCTGGGATAGCGAGCACTCAGCCTGTGAGAGCTACAGATCGGTTCTCTCCTGAGTaGTCGCTGCGGAATAGGATC | + |
Preference number: 5 (lower is better) Translates to: FLMEIPGIASTQPVRATDRFSPE*SLRNRI Trigger: GATCCTATTCCGCAGCGACAACTCAGGAGAGAACCG...ATCTGTAGCTCTCACAGGCTGAGTGCTCGCTATCCCAGGGATCTCCATCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | AGCATCCATTCTAATCCACACTCAAGTGGGCAATGGAGTGTTGGTGGGTGGGGCACGAGCACTTGGTCTTaGAAGGAATACACGGCCTGC | + |
Preference number: 5 (lower is better) Translates to: SIHSNPHSSGQWSVGGWGTSTWS*KEYTAC Trigger: GCAGGCCGTGTATTCCTTCAAAGACCAAGTGCTCGT...GCCCCACCCACCAACACTCCATTGCCCACTTGAGTGTGGATTAGAATGGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | GGGGTAGTGGGGCAAAGTGTTGTCCCTGAGTGTGGAGCCTTGGGCTTAATACCCCTTGTAATAGGGCTGTaGGCAGGAGTACCTTATCTC | + |
Preference number: 5 (lower is better) Translates to: GVVGQSVVPECGALGLIPLVIGL*AGVPYL Trigger: GAGATAAGGTACTCCTGCCAACAGCCCTATTACAAG...GGGTATTAAGCCCAAGGCTCCACACTCAGGGACAACACTTTGCCCCACTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | CCAGGACTCATGGCTCTCTGTCTCTTTCCAATGAGACTCTGTCCCTTGACCTTGACTGTCACATTAGGATaGGAGATGCCCCAGCCAGCC | + |
Preference number: 5 (lower is better) Translates to: PGLMALCLFPMRLCPLTLTVTLG*EMPQPA Trigger: GGCTGGCTGGGGCATCTCCAATCCTAATGTGACAGT...CAAGGTCAAGGGACAGAGTCTCATTGGAAAGAGACAGAGAGCCATGAGTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS TCA 90 bp | GTAGTGGGCGTCGAAGCCTGTGAATCGTTCCTCATTGGAGAAATCTaGCCGGAAAGTGACAGACATGAAGGTGCCAGGCGAAAGAACCAC | + |
Preference number: 5 (lower is better) Translates to: VVGVEACESFLIGEI*PESDRHEGARRKNH Trigger: GTGGTTCTTTCGCCTGGCACCTTCATGTCTGTCACTTTCCGGTCAGATTTCTCCAATGAGGAACGATTCACAGGCTTCGACGCCCACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS TCA 90 bp | AGTTGTCGCTGCGGAATAGGATCTGGACACTGTGAGTCTGGGTGCTaGTTGGTTCTGGGGATTTCTCTCCACAGAAGGGACCCCATACTT | + |
Preference number: 5 (lower is better) Translates to: SCRCGIGSGHCESGC*LVLGISLHRRDPIL Trigger: AAGTATGGGGTCCCTTCTGTGGAGAGAAATCCCCAGAACCAATCAGCACCCAGACTCACAGTGTCCAGATCCTATTCCGCAGCGACAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS TCA 90 bp | GTCTGGATGGAGTATCACTCGGGCAGCAGAGCTATTGACAGCTCCTaGTTTGTCCCGAACATCATGAAGGCCCAGATAGACGGTGACATG | + |
Preference number: 5 (lower is better) Translates to: VWMEYHSGSRAIDSS*FVPNIMKAQIDGDM Trigger: CATGTCACCGTCTATCTGGGCCTTCATGATGTTCGGGACAAATCAGGAGCTGTCAATAGCTCTGCTGCCCGAGTGATACTCCATCCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | AGCACTGGTCAGACCCTATGGGACCTTCCAGATGAGGAGACTGAAGCTCACAGGTCACCTCAGAGTCACTaGGATAGGAATCTGGATAGC | + |
Preference number: 5 (lower is better) Translates to: STGQTLWDLPDEETEAHRSPQSH*DRNLDS Trigger: GCTATCCAGATTCCTATCCAAGTGACTCTGAGGTGA...CCTGTGAGCTTCAGTCTCCTCATCTGGAAGGTCCCATAGGGTCTGACCAGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | CAGTGGGGCAGTCTTCTCTTTCTTCAAGTAGTCTCCATACACGTGGCTGGGGGCTCATCTTCCCTCTCCTaGCACTCATCCACATCTACA | + |
Preference number: 5 (lower is better) Translates to: QWGSLLFLQVVSIHVAGGSSSLS*HSSTST Trigger: TGTAGATGTGGATGAGTGCAAGGAGAGGGAAGATGA...GCCCCCAGCCACGTGTATGGAGACTACTTGAAGAAAGAGAAGACTGCCCCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | CACTTCCAGTGGCACATTTCCTCCACAAGGCCACTCCACTCCTGTACGGTGACAACAGCTGACGAGCACTaGGTCTTTGAAGGAATACAC | + |
Preference number: 5 (lower is better) Translates to: HFQWHISSTRPLHSCTVTTADEH*VFEGIH Trigger: GTGTATTCCTTCAAAGACCAAGTGCTCGTCAGCTGT...TGTCACCGTACAGGAGTGGAGTGGCCTTGTGGAGGAAATGTGCCACTGGAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS TCA 90 bp | GCTGACCATGAAGCCTTCCTCCAGGTCAATGGTATAGGAACATTCTaGGCTCTTGGGATAAGGGTTGGGGTAATCGGGGCTGGTGATTGT | + |
Preference number: 5 (lower is better) Translates to: ADHEAFLQVNGIGTF*ALGIRVGVIGAGDC Trigger: ACAATCACCAGCCCCGATTACCCCAACCCTTATCCCAAGAGCTCAGAATGTTCCTATACCATTGACCTGGAGGAAGGCTTCATGGTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | ATCCATTCTAATCCACACTCAAGTGGGCAATGGAGTGTTGGTGGGTGGGGCGGGGTGAATCGTTCCTCATaGGAGAAATCTGACCGGAAA | + |
Preference number: 5 (lower is better) Translates to: IHSNPHSSGQWSVGGWGGVNRSS*EKSDRK Trigger: TTTCCGGTCAGATTTCTCCAATGAGGAACGATTCAC...CCCGCCCCACCCACCAACACTCCATTGCCCACTTGAGTGTGGATTAGAATGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | TCACTTTCCAGAGCTGGAGGGCTGCTCTGTGTTTGTGTGGAGTGGCAGGTGTTGCTTCAGACACTCAATTaGGAATGTGTCCATCACCTC | + |
Preference number: 5 (lower is better) Translates to: SLSRAGGLLCVCVEWQVLLQTLN*ECVHHL Trigger: GAGGTGATGGACACATTCCAAATTGAGTGTCTGAAG...CAACACCTGCCACTCCACACAAACACAGAGCAGCCCTCCAGCTCTGGAAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | AGAATAAATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTGGGCTGGGCGGCCATaGAAGATCCTGGAGATCTGC | + |
Preference number: 5 (lower is better) Translates to: RINCAQPEVGICMGNLKLWAGRP*KILEIC Trigger: GCAGATCTCCAGGATCTTCAATGGCCGCCCAGCCCA...AAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATTTATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | AGCACTGGTCAGACCCTATGGGACCTTCCAGATGAGGAGACTGAAGCTCACAGGACTCCATACACTTGCTaGCTACCACATTCTTCAGGT | + |
Preference number: 5 (lower is better) Translates to: STGQTLWDLPDEETEAHRTPYTC*LPHSSG Trigger: ACCTGAAGAATGTGGTAGCAAGCAAGTGTATGGAGT...CCTGTGAGCTTCAGTCTCCTCATCTGGAAGGTCCCATAGGGTCTGACCAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS GCA 90 bp | GGGATTTCAATCTCCATCAGGTTCTCTGGAAACCTCTGTAAGAACTaGTTCCCCCAGCCACTGACGATGACCATGGTTCCTTCAGTGGAA | + |
Preference number: 5 (lower is better) Translates to: GISISIRFSGNLCKN*FPQPLTMTMVPSVE Trigger: TTCCACTGAAGGAACCATGGTCATCGTCAGTGGCTGGGGGAAGCAGTTCTTACAGAGGTTTCCAGAGAACCTGATGGAGATTGAAATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | CCAGGACTCATGGCTCTCTGTCTCTTTCCAATGAGACTCTGTCCCTTGACCTTGCTTGTAATAGGGCTGTaGGCAGGAGTACCTTATCTC | + |
Preference number: 5 (lower is better) Translates to: PGLMALCLFPMRLCPLTLLVIGL*AGVPYL Trigger: GAGATAAGGTACTCCTGCCAACAGCCCTATTACAAG...CAAGGTCAAGGGACAGAGTCTCATTGGAAAGAGACAGAGAGCCATGAGTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | GAGAGGCTCAGAGAGAGGAAGAGGCTTGGTTCTAGCTTTGGACTGTACTCTCTTCGAACCACTTGTCGTTaGGTACCCTCGATGTGTCTT | + |
Preference number: 5 (lower is better) Translates to: ERLRERKRLGSSFGLYSLRTTCR*VPSMCL Trigger: AAGACACATCGAGGGTACCAAACGACAAGTGGTTCG...AAGAGAGTACAGTCCAAAGCTAGAACCAAGCCTCTTCCTCTCTCTGAGCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS GCA 90 bp | TTTACATGCAGGTGCTGCTCGTCTTCGTCTGAGCGCCGTCTCCAGTaGTTTCCCATGATAATTTTGAAGTCAGAAGGGCTGAGCAAGTAT | + |
Preference number: 5 (lower is better) Translates to: FTCRCCSSSSERRLQ*FPMIILKSEGLSKY Trigger: ATACTTGCTCAGCCCTTCTGACTTCAAAATTATCATGGGAAAGCACTGGAGACGGCGCTCAGACGAAGACGAGCAGCACCTGCATGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CCA 90 bp | CATGTTTCAGCCCTGCAGGAGCTCCACAGTCTACAATTTTACAGGTaGGGATCTTGTTACTCCATGCACCGTCCTTCAGACACTCAATTT | + |
Preference number: 5 (lower is better) Translates to: HVSALQELHSLQFYR*GSCYSMHRPSDTQF Trigger: AAATTGAGTGTCTGAAGGACGGTGCATGGAGTAACAAGATCCCCACCTGTAAAATTGTAGACTGTGGAGCTCCTGCAGGGCTGAAACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 |
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CDS CCA 90 bp | CTTTTCTCCGGCACAGATCATGTCCTTGGTCACTTTCTTCTTCAATaGGGTATAGGCCTCCTGGCAGGTGTCAGAGTTTACAATTGGGAT | + |
Preference number: 5 (lower is better) Translates to: LFSGTDHVLGHFLLQ*GIGLLAGVRVYNWD Trigger: ATCCCAATTGTAAACTCTGACACCTGCCAGGAGGCCTATACCCCATTGAAGAAGAAAGTGACCAAGGACATGATCTGTGCCGGAGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | GATATTGGAGTGTGTTTTGATGACTCTTCCCAGTTCCCTCCACATTCCCTCTCCACAGCTGACGAGCACTaGGTCTTTGAAGGAATACAC | + |
Preference number: 5 (lower is better) Translates to: DIGVCFDDSSQFPPHSLSTADEH*VFEGIH Trigger: GTGTATTCCTTCAAAGACCAAGTGCTCGTCAGCTGT...GGAGAGGGAATGTGGAGGGAACTGGGAAGAGTCATCAAAACACACTCCAATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | TGTGTGGAGTGGCAGGTGTTGACACCTCATGGTGCCCTCTGGTATTTGAGTGGCTACCTTATCTCAGATTaGTATGTGGTGAGGTTGTTT | + |
Preference number: 5 (lower is better) Translates to: CVEWQVLTPHGALWYLSGYLISD*YVVRLF Trigger: AAACAACCTCACCACATACAAATCTGAGATAAGGTA...GCCACTCAAATACCAGAGGGCACCATGAGGTGTCAACACCTGCCACTCCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS TCA 90 bp | AATAGGGCTGTTGGCAGGAGTACCTTATCTCAGATTTGTATGTGGTaGGGTTGTTTCTGGTGGAGAAGGTTACTAGCCCATGTTTCAGCC | + |
Preference number: 5 (lower is better) Translates to: NRAVGRSTLSQICMW*GCFWWRRLLAHVSA Trigger: GGCTGAAACATGGGCTAGTAACCTTCTCCACCAGAAACAACCTCACCACATACAAATCTGAGATAAGGTACTCCTGCCAACAGCCCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 |
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CDS-3UTR CAA 90 bp | GAAGGGATTGGGTTCTCTGTAAGTAATCCATTCTCAGATGTTGCACTGTGTGGGTCACCTCAGAGTCACTaGGATAGGAATCTGGATAGC | + |
Preference number: 5 (lower is better) Translates to: EGIGFSVSNPFSDVALCGSPQSH*DRNLDS Trigger: GCTATCCAGATTCCTATCCAAGTGACTCTGAGGTGA...CCCACACAGTGCAACATCTGAGAATGGATTACTTACAGAGAACCCAATCCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | ATCCACACTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATACGGTTCTCTCCTGAGTaGTCGCTGCGGAATAGGATC | + |
Preference number: 5 (lower is better) Translates to: IHTLCHHSVYKPMVVRDIRFSPE*SLRNRI Trigger: GATCCTATTCCGCAGCGACAACTCAGGAGAGAACCG...TATGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAGTGTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | AATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTTAAAGTCACCTCAGAGTCACTaGGATAGGAATCTGGATAGC | + |
Preference number: 5 (lower is better) Translates to: NCAQPEVGICMGNLKLLKSPQSH*DRNLDS Trigger: GCTATCCAGATTCCTATCCAAGTGACTCTGAGGTGA...CTTTAAAAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | TTCAAACACAGTGTTCTCAGTTTGGTGAGACAAAGCGACAGGAATCAGAGAAATACGAGCACTTGGTCTTaGAAGGAATACACGGCCTGC | + |
Preference number: 5 (lower is better) Translates to: FKHSVLSLVRQSDRNQRNTSTWS*KEYTAC Trigger: GCAGGCCGTGTATTCCTTCAAAGACCAAGTGCTCGT...ATTTCTCTGATTCCTGTCGCTTTGTCTCACCAAACTGAGAACACTGTGTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | CTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATACACTTTCTTACAGGTGGGGATCTaGTTACTCCATGCACCGTCC | + |
Preference number: 5 (lower is better) Translates to: LCVIIQSINPWLLGTYTFLQVGI*LLHAPS Trigger: GGACGGTGCATGGAGTAACAAGATCCCCACCTGTAA...GAAAGTGTATGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | TTCAAACACAGTGTTCTCAGTTTGGTGAGACAAAGCGACAGGAATCAGAGAAATGCCCACCAGGTACCATaGGTCTCTCTCTGCATCTTT | + |
Preference number: 5 (lower is better) Translates to: FKHSVLSLVRQSDRNQRNAHQVP*VSLCIF Trigger: AAAGATGCAGAGAGAGACCAATGGTACCTGGTGGGC...ATTTCTCTGATTCCTGTCGCTTTGTCTCACCAAACTGAGAACACTGTGTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | AATTGTGCCCAGCCAGAAGTTGGTATCTGCATGGGAAACCTGAAGCTTTTAAAGGTGAATCGTTCCTCATaGGAGAAATCTGACCGGAAA | + |
Preference number: 5 (lower is better) Translates to: NCAQPEVGICMGNLKLLKVNRSS*EKSDRK Trigger: TTTCCGGTCAGATTTCTCCAATGAGGAACGATTCAC...CTTTAAAAGCTTCAGGTTTCCCATGCAGATACCAACTTCTGGCTGGGCACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | CAAATATCAACACTCTCTAGTGACCAAGCATACAAATATGTGAGCCTGTGGGGGTTGTATGTGGTGAGGTaGTTTCTGGTGGAGAAGGTT | + |
Preference number: 5 (lower is better) Translates to: QISTLSSDQAYKYVSLWGLYVVR*FLVEKV Trigger: AACCTTCTCCACCAGAAACAACCTCACCACATACAA...CCCCCACAGGCTCACATATTTGTATGCTTGGTCACTAGAGAGTGTTGATATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | ATCATGTCACAGGCATTTATAGGACAAGGTTCAAGTTCCATGGTATATTTAGTTTGCTTCCGGGAGAACTaGGGGACACCACACACTGGA | + |
Preference number: 5 (lower is better) Translates to: IMSQAFIGQGSSSMVYLVCFREN*GTPHTG Trigger: TCCAGTGTGTGGTGTCCCCAAGTTCTCCCGGAAGCA...AACTAAATATACCATGGAACTTGAACCTTGTCCTATAAATGCCTGTGACATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | CTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATACACTTTCTCATCTTCCCTCTCCTaGCACTCATCCACATCTACA | + |
Preference number: 5 (lower is better) Translates to: LCVIIQSINPWLLGTYTFSSSLS*HSSTST Trigger: TGTAGATGTGGATGAGTGCAAGGAGAGGGAAGATGA...GAAAGTGTATGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | CTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATACACTTTCACAGCTGACGAGCACTaGGTCTTTGAAGGAATACAC | + |
Preference number: 5 (lower is better) Translates to: LCVIIQSINPWLLGTYTFTADEH*VFEGIH Trigger: GTGTATTCCTTCAAAGACCAAGTGCTCGTCAGCTGT...GAAAGTGTATGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | CTCTGTGTCATCATTCAGTCTATAAACCCATGGTTGTTAGGGACATACACTTTCCTTCAGACACTCAATTaGGAATGTGTCCATCACCTC | + |
Preference number: 5 (lower is better) Translates to: LCVIIQSINPWLLGTYTFLQTLN*ECVHHL Trigger: GAGGTGATGGACACATTCCAAATTGAGTGTCTGAAG...GAAAGTGTATGTCCCTAACAACCATGGGTTTATAGACTGAATGATGACACAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230040.2 |
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CDS-3UTR CAA 90 bp | CAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTTTGAGTGATGGATTTCCCATGATAATTTaGAAGTCAGAAGGGCTGAGC | + |
Preference number: 5 (lower is better) Translates to: QTQRGSQLSIITKILSDGFPMII*KSEGLS Trigger: GCTCAGCCCTTCTGACTTCAAAATTATCATGGGAAA...TCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | CAGACCCAAAGAGGCAGTCAGCTGTCCATCATTACAAAAATTTTGAGTGATGGAGCACAGATCATGTCCTaGGTCACTTTCTTCTTCAAT | + |
Preference number: 5 (lower is better) Translates to: QTQRGSQLSIITKILSDGAQIMS*VTFFFN Trigger: ATTGAAGAAGAAAGTGACCAAGGACATGATCTGTGC...TCCATCACTCAAAATTTTTGTAATGATGGACAGCTGACTGCCTCTTTGGGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS-3UTR CAA 90 bp | TTCAAACACAGTGTTCTCAGTTTGGTGAGACAAAGCGACAGGAATCAGAGAAATTACCTTATCTCAGATTaGTATGTGGTGAGGTTGTTT | + |
Preference number: 5 (lower is better) Translates to: FKHSVLSLVRQSDRNQRNYLISD*YVVRLF Trigger: AAACAACCTCACCACATACAAATCTGAGATAAGGTA...ATTTCTCTGATTCCTGTCGCTTTGTCTCACCAAACTGAGAACACTGTGTTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CCA 72 bp | CCTCCCCAGGACACCAGGCCTTGGGCTACCCAGTGCTaGCTCATCTCATCAAAGATGACGAAGGCCCCACCG | + |
Preference number: 6 (lower is better) Translates to: PPQDTRPWATQC*LISSKMTKAPP Trigger: CGGTGGGGCCTTCGTCATCTTTGATGAGATGAGCCAGCACTGGGTAGCCCAAGGCCTGGTGTCCTGGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS GCA 72 bp | GGTCCTCCCCAGGACACCAGGCCTTGGGCTACCCAGTaGTGGCTCATCTCATCAAAGATGACGAAGGCCCCA | + |
Preference number: 6 (lower is better) Translates to: GPPQDTRPWATQ*WLISSKMTKAP Trigger: TGGGGCCTTCGTCATCTTTGATGAGATGAGCCAGCACTGGGTAGCCCAAGGCCTGGTGTCCTGGGGAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CCA 72 bp | GAACCACTTCCTGGCCGGGGGTCTGCTCAGTATCGGTaGTCTCCCTGCCACAAAAGGTTGCCAGCACCTGGT | + |
Preference number: 6 (lower is better) Translates to: EPLPGRGSAQYR*SPCHKRLPAPG Trigger: ACCAGGTGCTGGCAACCTTTTGTGGCAGGGAGACCACCGATACTGAGCAGACCCCCGGCCAGGAAGTGGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS CAA 90 bp | TCCACCACTATGAGGGCCTGCCATGGGAAGAGGCCAAGCTCAGCATaGCGACCTCCGATGATTCTCTTCACCAGGTTTGGCAGGGCGCGG | + |
Preference number: 6 (lower is better) Translates to: STTMRACHGKRPSSA*RPPMILFTRFGRAR Trigger: CCGCGCCCTGCCAAACCTGGTGAAGAGAATCATCGGAGGTCGCAATGCTGAGCTTGGCCTCTTCCCATGGCAGGCCCTCATAGTGGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS GCA 72 bp | CCTGGCCGGGGGTCTGCTCAGTATCGGTGGTCTCCCTaGCACAAAAGGTTGCCAGCACCTGGTCTTCTGTTT | + |
Preference number: 6 (lower is better) Translates to: PGRGSAQYRWSP*HKRLPAPGLLF Trigger: AAACAGAAGACCAGGTGCTGGCAACCTTTTGTGGCAGGGAGACCACCGATACTGAGCAGACCCCCGGCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS GCA 72 bp | GTGCCAGGCGAAAGAACCACTTCCTGGCCGGGGGTCTaGTCAGTATCGGTGGTCTCCCTGCCACAAAAGGTT | + |
Preference number: 6 (lower is better) Translates to: VPGERTTSWPGV*SVSVVSLPQKV Trigger: AACCTTTTGTGGCAGGGAGACCACCGATACTGAGCAGACCCCCGGCCAGGAAGTGGTTCTTTCGCCTGGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS GCA 72 bp | TGTGTTGTCTCTGCGCTGGGAACGCAGAACATGGGCTaGTGTGAGTATCCAGGACTCAGAGAGCAGGGCCCC | + |
Preference number: 6 (lower is better) Translates to: CVVSALGTQNMG*CEYPGLREQGP Trigger: GGGGCCCTGCTCTCTGAGTCCTGGATACTCACAGCAGCCCATGTTCTGCGTTCCCAGCGCAGAGACAACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CCA 72 bp | ACAGACATGAAGGTGCCAGGCGAAAGAACCACTTCCTaGCCGGGGGTCTGCTCAGTATCGGTGGTCTCCCTG | + |
Preference number: 6 (lower is better) Translates to: TDMKVPGERTTS*PGVCSVSVVSL Trigger: CAGGGAGACCACCGATACTGAGCAGACCCCCGGCCAGGAAGTGGTTCTTTCGCCTGGCACCTTCATGTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS CCA 72 bp | CCCCACAGAAGGGTTGTCCGTTCAGGTGTGACAGCATaGCAATCCATGGCATGGTACCCTTCTGGGCTGGGC | + |
Preference number: 6 (lower is better) Translates to: PHRRVVRSGVTA*QSMAWYPSGLG Trigger: GCCCAGCCCAGAAGGGTACCATGCCATGGATTGCCATGCTGTCACACCTGAACGGACAACCCTTCTGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CCA 72 bp | AGCATTGCGACCTCCGATGATTCTCTTCACCAGGTTTaGCAGGGCGCGGGAGGGCTGTCCACACACTGGAAG | + |
Preference number: 6 (lower is better) Translates to: SIATSDDSLHQV*QGAGGLSTHWK Trigger: CTTCCAGTGTGTGGACAGCCCTCCCGCGCCCTGCCAAACCTGGTGAAGAGAATCATCGGAGGTCGCAATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CAA 90 bp | AGCATGGCAATCCATGGCATGGTACCCTTCTGGGCTGGGCGGCCATaGAAGATCCTGGAGATCTGCTTCCGGGAGAACTTGGGGACACCA | + |
Preference number: 6 (lower is better) Translates to: SMAIHGMVPFWAGRP*KILEICFRENLGTP Trigger: TGGTGTCCCCAAGTTCTCCCGGAAGCAGATCTCCAGGATCTTCAATGGCCGCCCAGCCCAGAAGGGTACCATGCCATGGATTGCCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS TCA 72 bp | CACCACACACTGGAAGGCAGGTGGGCAGGCTTCTCTTaGGCACTTCGTTCGTCCAGGTCCCATGAGCAGAAC | + |
Preference number: 6 (lower is better) Translates to: HHTLEGRWAGFS*ALRSSRSHEQN Trigger: GTTCTGCTCATGGGACCTGGACGAACGAAGTGCTCAAGAGAAGCCTGCCCACCTGCCTTCCAGTGTGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS TCA 72 bp | GTCCACACACTGGAAGGCAGGTGGGCAGGCTTCTCTTaGGCACTTCGTTCGTCCAGGTCCCATGAGCAGAAC | + |
Preference number: 6 (lower is better) Translates to: VHTLEGRWAGFS*ALRSSRSHEQN Trigger: GTTCTGCTCATGGGACCTGGACGAACGAAGTGCTCAAGAGAAGCCTGCCCACCTGCCTTCCAGTGTGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS GCA 72 bp | AGAGCCTCCAGCCTCGGTTCTCTCCTGAGTTGTCGCTaGGGAATAGGATCTGGACACTGTGAGTCTGGGTGC | + |
Preference number: 6 (lower is better) Translates to: RASSLGSLLSCR*GIGSGHCESGC Trigger: GCACCCAGACTCACAGTGTCCAGATCCTATTCCGCAGCGACAACTCAGGAGAGAACCGAGGCTGGAGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS GCA 72 bp | GGTACCCTCGATGTGTCTTCCACCACTATGAGGGCCTaGCATGGGAAGAGGCCAAGCTCAGCATTGCGACCT | + |
Preference number: 6 (lower is better) Translates to: GTLDVSSTTMRA*HGKRPSSALRP Trigger: AGGTCGCAATGCTGAGCTTGGCCTCTTCCCATGGCAGGCCCTCATAGTGGTGGAAGACACATCGAGGGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CCA 72 bp | CAGCATGGCAATCCATGGCATGGTACCCTTCTGGGCTaGGCGGCCATTGAAGATCCTGGAGATCTGCTTCCG | + |
Preference number: 6 (lower is better) Translates to: QHGNPWHGTLLG*AAIEDPGDLLP Trigger: CGGAAGCAGATCTCCAGGATCTTCAATGGCCGCCCAGCCCAGAAGGGTACCATGCCATGGATTGCCATGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CCA 72 bp | AGAGAGCAGGGCCCCACTCCCGAACCACTTGTCGTTTaGTACCCTCGATGTGTCTTCCACCACTATGAGGGC | + |
Preference number: 6 (lower is better) Translates to: REQGPTPEPLVV*YPRCVFHHYEG Trigger: GCCCTCATAGTGGTGGAAGACACATCGAGGGTACCAAACGACAAGTGGTTCGGGAGTGGGGCCCTGCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CAA 72 bp | CCATTGAAGATCCTGGAGATCTGCTTCCGGGAGAACTaGGGGACACCACACACTGGAAGGCAGGTGGGCAGG | + |
Preference number: 6 (lower is better) Translates to: PLKILEICFREN*GTPHTGRQVGR Trigger: CCTGCCCACCTGCCTTCCAGTGTGTGGTGTCCCCAAGTTCTCCCGGAAGCAGATCTCCAGGATCTTCAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CAA 90 bp | CAGGACACCACGCCCACCAGGTACCATTGGTCTCTCTCTGCATCTTaGGTCACCATAGGGCCTCCAGAGTCACCAGCACAGGCATCTTTC | + |
Preference number: 6 (lower is better) Translates to: QDTTPTRYHWSLSAS*VTIGPPESPAQASF Trigger: GAAAGATGCCTGTGCTGGTGACTCTGGAGGCCCTATGGTGACCAAAGATGCAGAGAGAGACCAATGGTACCTGGTGGGCGTGGTGTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CCA 72 bp | TGTGACAGCATGGCAATCCATGGCATGGTACCCTTCTaGGCTGGGCGGCCATTGAAGATCCTGGAGATCTGC | + |
Preference number: 6 (lower is better) Translates to: CDSMAIHGMVPF*AGRPLKILEIC Trigger: GCAGATCTCCAGGATCTTCAATGGCCGCCCAGCCCAGAAGGGTACCATGCCATGGATTGCCATGCTGTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CAA 72 bp | GGGCTGGTGATTGTGCCTGTCCTCTGGGTAAAGAGATaGCCGCTGCATTCCACTCGGCAGGTCCTGTTGTCT | + |
Preference number: 6 (lower is better) Translates to: GLVIVPVLWVKR*PLHSTRQVLLS Trigger: AGACAACAGGACCTGCCGAGTGGAATGCAGCGGCAATCTCTTTACCCAGAGGACAGGCACAATCACCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS CAA 72 bp | TCCACCAGACCAAGGTCGTTCTCAAACGTGCTGGGGTaGTACAGTGGGTGGAGCGTGGTGCGCTTTACATGC | + |
Preference number: 6 (lower is better) Translates to: STRPRSFSNVLG*YSGWSVVRFTC Trigger: GCATGTAAAGCGCACCACGCTCCACCCACTGTACAACCCCAGCACGTTTGAGAACGACCTTGGTCTGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CAA 90 bp | TTGCTTGCTACCACATTCTTCAGGTCCTCCCCAGGACACCAGGCCTaGGGCTACCCAGTGCTGGCTCATCTCATCAAAGATGACGAAGGC | + |
Preference number: 6 (lower is better) Translates to: LLATTFFRSSPGHQA*GYPVLAHLIKDDEG Trigger: GCCTTCGTCATCTTTGATGAGATGAGCCAGCACTGGGTAGCCCAAGGCCTGGTGTCCTGGGGAGGACCTGAAGAATGTGGTAGCAAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS TCA 72 bp | AAGGCTACCCCCACAGAAGGGTTGTCCGTTCAGGTGTaGCAGCATGGCAATCCATGGCATGGTACCCTTCTG | + |
Preference number: 6 (lower is better) Translates to: KATPTEGLSVQV*QHGNPWHGTLL Trigger: CAGAAGGGTACCATGCCATGGATTGCCATGCTGTCACACCTGAACGGACAACCCTTCTGTGGGGGTAGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS TCA 72 bp | CTTGGGCTACCCAGTGCTGGCTCATCTCATCAAAGATaGCGAAGGCCCCACCGCTATCCCCAAGACACGTAT | + |
Preference number: 6 (lower is better) Translates to: LGLPSAGSSHQR*RRPHRYPQDTY Trigger: ATACGTGTCTTGGGGATAGCGGTGGGGCCTTCGTCATCTTTGATGAGATGAGCCAGCACTGGGTAGCCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS GCA 72 bp | CTGACGAGCACTTGGTCTTTGAAGGAATACACGGCCTaGGAGGGCTCGATTTTCCCGTACACAGGAGGCTGT | + |
Preference number: 6 (lower is better) Translates to: LTSTWSLKEYTA*EGSIFPYTGGC Trigger: ACAGCCTCCTGTGTACGGGAAAATCGAGCCCTCGCAGGCCGTGTATTCCTTCAAAGACCAAGTGCTCGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS CAA 72 bp | ACCACATTCTTCAGGTCCTCCCCAGGACACCAGGCCTaGGGCTACCCAGTGCTGGCTCATCTCATCAAAGAT | + |
Preference number: 6 (lower is better) Translates to: TTFFRSSPGHQA*GYPVLAHLIKD Trigger: ATCTTTGATGAGATGAGCCAGCACTGGGTAGCCCAAGGCCTGGTGTCCTGGGGAGGACCTGAAGAATGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CCA 72 bp | TCCTTCGAGACAGGTATGACTGTGTTGTCTCTGCGCTaGGAACGCAGAACATGGGCTGCTGTGAGTATCCAG | + |
Preference number: 6 (lower is better) Translates to: SFETGMTVLSLR*ERRTWAAVSIQ Trigger: CTGGATACTCACAGCAGCCCATGTTCTGCGTTCCCAGCGCAGAGACAACACAGTCATACCTGTCTCGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CAA 72 bp | ACGGTGACATGTTCCTTCGAGACAGGTATGACTGTGTaGTCTCTGCGCTGGGAACGCAGAACATGGGCTGCT | + |
Preference number: 6 (lower is better) Translates to: TVTCSFETGMTV*SLRWERRTWAA Trigger: AGCAGCCCATGTTCTGCGTTCCCAGCGCAGAGACAACACAGTCATACCTGTCTCGAAGGAACATGTCACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS TCA 72 bp | TGCGGAATAGGATCTGGACACTGTGAGTCTGGGTGCTaGTTGGTTCTGGGGATTTCTCTCCACAGAAGGGAC | + |
Preference number: 6 (lower is better) Translates to: CGIGSGHCESGC*LVLGISLHRRD Trigger: GTCCCTTCTGTGGAGAGAAATCCCCAGAACCAATCAGCACCCAGACTCACAGTGTCCAGATCCTATTCCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS TCA 72 bp | CCTGAGTTGTCGCTGCGGAATAGGATCTGGACACTGTaGGTCTGGGTGCTGATTGGTTCTGGGGATTTCTCT | + |
Preference number: 6 (lower is better) Translates to: PELSLRNRIWTL*VWVLIGSGDFS Trigger: AGAGAAATCCCCAGAACCAATCAGCACCCAGACTCACAGTGTCCAGATCCTATTCCGCAGCGACAACTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS TCA 72 bp | GGTGCGCTTTACATGCAGGTGCTGCTCGTCTTCGTCTaGGCGCCGTCTCCAGTGCTTTCCCATGATAATTTT | + |
Preference number: 6 (lower is better) Translates to: GALYMQVLLVFV*APSPVLSHDNF Trigger: AAAATTATCATGGGAAAGCACTGGAGACGGCGCTCAGACGAAGACGAGCAGCACCTGCATGTAAAGCGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS GCA 72 bp | AGGTGCTGCTCGTCTTCGTCTGAGCGCCGTCTCCAGTaGTTTCCCATGATAATTTTGAAGTCAGAAGGGCTG | + |
Preference number: 6 (lower is better) Translates to: RCCSSSSERRLQ*FPMIILKSEGL Trigger: CAGCCCTTCTGACTTCAAAATTATCATGGGAAAGCACTGGAGACGGCGCTCAGACGAAGACGAGCAGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CCA 72 bp | GCCCTGCAGGAGCTCCACAGTCTACAATTTTACAGGTaGGGATCTTGTTACTCCATGCACCGTCCTTCAGAC | + |
Preference number: 6 (lower is better) Translates to: ALQELHSLQFYR*GSCYSMHRPSD Trigger: GTCTGAAGGACGGTGCATGGAGTAACAAGATCCCCACCTGTAAAATTGTAGACTGTGGAGCTCCTGCAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 |
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CDS TCA 72 bp | GTCGAAGCCTGTGAATCGTTCCTCATTGGAGAAATCTaGCCGGAAAGTGACAGACATGAAGGTGCCAGGCGA | + |
Preference number: 6 (lower is better) Translates to: VEACESFLIGEI*PESDRHEGARR Trigger: TCGCCTGGCACCTTCATGTCTGTCACTTTCCGGTCAGATTTCTCCAATGAGGAACGATTCACAGGCTTCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS TCA 72 bp | GAAGCCTTCCTCCAGGTCAATGGTATAGGAACATTCTaGGCTCTTGGGATAAGGGTTGGGGTAATCGGGGCT | + |
Preference number: 6 (lower is better) Translates to: EAFLQVNGIGTF*ALGIRVGVIGA Trigger: AGCCCCGATTACCCCAACCCTTATCCCAAGAGCTCAGAATGTTCCTATACCATTGACCTGGAGGAAGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS TCA 72 bp | GAGTATCACTCGGGCAGCAGAGCTATTGACAGCTCCTaGTTTGTCCCGAACATCATGAAGGCCCAGATAGAC | + |
Preference number: 6 (lower is better) Translates to: EYHSGSRAIDSS*FVPNIMKAQID Trigger: GTCTATCTGGGCCTTCATGATGTTCGGGACAAATCAGGAGCTGTCAATAGCTCTGCTGCCCGAGTGATACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS TCA 72 bp | AGTCTGGATGGAGTATCACTCGGGCAGCAGAGCTATTaGCAGCTCCTGATTTGTCCCGAACATCATGAAGGC | + |
Preference number: 6 (lower is better) Translates to: SLDGVSLGQQSY*QLLICPEHHEG Trigger: GCCTTCATGATGTTCGGGACAAATCAGGAGCTGTCAATAGCTCTGCTGCCCGAGTGATACTCCATCCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS GCA 72 bp | CTGCTCAGTATCGGTGGTCTCCCTGCCACAAAAGGTTaGCAGCACCTGGTCTTCTGTTTCTACCTTCACATA | + |
Preference number: 6 (lower is better) Translates to: LLSIGGLPATKG*QHLVFCFYLHI Trigger: TATGTGAAGGTAGAAACAGAAGACCAGGTGCTGGCAACCTTTTGTGGCAGGGAGACCACCGATACTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS GCA 72 bp | ATCTCCATCAGGTTCTCTGGAAACCTCTGTAAGAACTaGTTCCCCCAGCCACTGACGATGACCATGGTTCCT | + |
Preference number: 6 (lower is better) Translates to: ISIRFSGNLCKN*FPQPLTMTMVP Trigger: AGGAACCATGGTCATCGTCAGTGGCTGGGGGAAGCAGTTCTTACAGAGGTTTCCAGAGAACCTGATGGAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CCA 72 bp | GATCTGGACACTGTGAGTCTGGGTGCTGATTGGTTCTaGGGATTTCTCTCCACAGAAGGGACCCCATACTTT | + |
Preference number: 6 (lower is better) Translates to: DLDTVSLGADWF*GFLSTEGTPYF Trigger: AAAGTATGGGGTCCCTTCTGTGGAGAGAAATCCCCAGAACCAATCAGCACCCAGACTCACAGTGTCCAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 ENSMUST00000230040.2 |
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CDS CAA 90 bp | TCGTCTTCGTCTGAGCGCCGTCTCCAGTGCTTTCCCATGATAATTTaGAAGTCAGAAGGGCTGAGCAAGTATGAGCTGTGTAGGGTTGGT | + |
Preference number: 6 (lower is better) Translates to: SSSSERRLQCFPMII*KSEGLSKYELCRVG Trigger: ACCAACCCTACACAGCTCATACTTGCTCAGCCCTTCTGACTTCAAAATTATCATGGGAAAGCACTGGAGACGGCGCTCAGACGAAGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS GCA 72 bp | AGTTGGAGACCTTTGTGTAGACTCCATACACTTGCTTaGTACCACATTCTTCAGGTCCTCCCCAGGACACCA | + |
Preference number: 6 (lower is better) Translates to: SWRPLCRLHTLA*YHILQVLPRTP Trigger: TGGTGTCCTGGGGAGGACCTGAAGAATGTGGTAGCAAGCAAGTGTATGGAGTCTACACAAAGGTCTCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CAA 90 bp | GGCTGTTGGCAGGAGTACCTTATCTCAGATTTGTATGTGGTGAGGTaGTTTCTGGTGGAGAAGGTTACTAGCCCATGTTTCAGCCCTGCA | + |
Preference number: 6 (lower is better) Translates to: GCWQEYLISDLYVVR*FLVEKVTSPCFSPA Trigger: TGCAGGGCTGAAACATGGGCTAGTAACCTTCTCCACCAGAAACAACCTCACCACATACAAATCTGAGATAAGGTACTCCTGCCAACAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 |
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CDS CAA 72 bp | TCTGAGCGCCGTCTCCAGTGCTTTCCCATGATAATTTaGAAGTCAGAAGGGCTGAGCAAGTATGAGCTGTGT | + |
Preference number: 6 (lower is better) Translates to: SERRLQCFPMII*KSEGLSKYELC Trigger: ACACAGCTCATACTTGCTCAGCCCTTCTGACTTCAAAATTATCATGGGAAAGCACTGGAGACGGCGCTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS CCA 72 bp | TCCAGGTCCCATGAGCAGAACACGTATATACACCTGTaGTATTGTGAAGCATCTTGTAATAGGGCTGTTGGC | + |
Preference number: 6 (lower is better) Translates to: SRSHEQNTYIHL*YCEASCNRAVG Trigger: GCCAACAGCCCTATTACAAGATGCTTCACAATACCACAGGTGTATATACGTGTTCTGCTCATGGGACCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 |
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CDS CCA 72 bp | AGCGATGTCATGGTTGTAGTTCTGGATGTTAAAGTCTaGATGGAGTATCACTCGGGCAGCAGAGCTATTGAC | + |
Preference number: 6 (lower is better) Translates to: SDVMVVVLDVKV*MEYHSGSRAID Trigger: GTCAATAGCTCTGCTGCCCGAGTGATACTCCATCCAGACTTTAACATCCAGAACTACAACCATGACATCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229619.2 |
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CDS CAA 72 bp | GGAGCTCCACAGTCTACAATTTTACAGGTGGGGATCTaGTTACTCCATGCACCGTCCTTCAGACACTCAATT | + |
Preference number: 6 (lower is better) Translates to: GAPQSTILQVGI*LLHAPSFRHSI Trigger: AATTGAGTGTCTGAAGGACGGTGCATGGAGTAACAAGATCCCCACCTGTAAAATTGTAGACTGTGGAGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 |
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CDS CAA 90 bp | TCTTCAATGGGGTATAGGCCTCCTGGCAGGTGTCAGAGTTTACAATaGGGATTTCAATCTCCATCAGGTTCTCTGGAAACCTCTGTAAGA | + |
Preference number: 6 (lower is better) Translates to: SSMGYRPPGRCQSLQ*GFQSPSGSLETSVR Trigger: TCTTACAGAGGTTTCCAGAGAACCTGATGGAGATTGAAATCCCAATTGTAAACTCTGACACCTGCCAGGAGGCCTATACCCCATTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089883.7 |
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CDS TCA 72 bp | GTTGGCAGGAGTACCTTATCTCAGATTTGTATGTGGTaGGGTTGTTTCTGGTGGAGAAGGTTACTAGCCCAT | + |
Preference number: 6 (lower is better) Translates to: VGRSTLSQICMW*GCFWWRRLLAH Trigger: ATGGGCTAGTAACCTTCTCCACCAGAAACAACCTCACCACATACAAATCTGAGATAAGGTACTCCTGCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 |
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CDS CAA 72 bp | CAGGAGTACCTTATCTCAGATTTGTATGTGGTGAGGTaGTTTCTGGTGGAGAAGGTTACTAGCCCATGTTTC | + |
Preference number: 6 (lower is better) Translates to: QEYLISDLYVVR*FLVEKVTSPCF Trigger: GAAACATGGGCTAGTAACCTTCTCCACCAGAAACAACCTCACCACATACAAATCTGAGATAAGGTACTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089883.7 ENSMUST00000229619.2 |