Pregenerated sensors for MASKBP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000117942Ensembl transcript IDs: ENSMUST00000140061.8
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATaGGAGCTCCTTCCATTACTCCATACAGGTCATTTTGCACTAGAT | + |
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Preference number: 1 (lower is better) Translates to: SWPLDTQEEVMAIVG*ELLPLLHTGHFALD Trigger: ATCTAGTGCAAAATGACCTGTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| 3UTR CCA 72 bp | AACAAGTCATTCTTTTCTGGATTAGATGAGGCCAGCTaGCCCTTGGATACCCAGGAAGAGGTGATGGCAATA | + |
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Preference number: 3 (lower is better) Translates to: NKSFFSGLDEAS*PLDTQEEVMAI Trigger: TATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAGCTGGCCTCATCTAATCCAGAAAAGAATGACTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| 3UTR TCA 72 bp | TTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATaGGAGCTCCTTCCATTACTCCATACAGGTCATTTT | + |
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Preference number: 3 (lower is better) Translates to: LDTQEEVMAIVG*ELLPLLHTGHF Trigger: AAAATGACCTGTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CCAGAAGGTGACATACTCTGTTCCCCAGTGCCAGCCCTGAGGGGAAGAGGTTTGCTGGGCTGCATTCGATaGGAAACTCGAGGTGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PEGDILCSPVPALRGRGLLGCIR*ETRGAG Trigger: ACCGGCACCTCGAGTTTCTCATCGAATGCAGCCCAG...CAAACCTCTTCCCCTCAGGGCTGGCACTGGGGAACAGAGTATGTCACCTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CCAGAAGGTGACATACTCTGTTCCCCAGTGCCAGCCCTGAGGGGAAGAGGTTTGTGTCCGGGCAATGGGTaGGTTCTTGCACTCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PEGDILCSPVPALRGRGLCPGNG*VLALQQ Trigger: CTGCTGGAGTGCAAGAACTCACCCATTGCCCGGACA...CAAACCTCTTCCCCTCAGGGCTGGCACTGGGGAACAGAGTATGTCACCTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | GGCCAGCTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGACTGCTGGGAGAGTTGTaGCCCCGGGAATCTGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GQLALGYPGRGDGNSRMRLLGEL*PRESEG Trigger: TCCCTCAGATTCCCGGGGTCACAACTCTCCCAGCAG...TCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAGCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTAGCCTCTGGAGCTCCTaGGGTGTTGCTGGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LALGYPGRGDGNSRMRAPSLWSS*GVAGRA Trigger: AGCTCTGCCAGCAACACCTCAGGAGCTCCAGAGGCT...AGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CCAGAAGGTGACATACTCTGTTCCCCAGTGCCAGCCCTGAGGGGAAGAGGTTTGAGAGTCACATGTGTTTaGGGCGCTTGTCCAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PEGDILCSPVPALRGRGLRVTCV*GACPRV Trigger: CACCCTTGGACAAGCGCCTCAAACACATGTGACTCT...CAAACCTCTTCCCCTCAGGGCTGGCACTGGGGAACAGAGTATGTCACCTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | GGCCAGCTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGGTTGTGAAGTCCATTaGACAGTGGGCCCCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: GQLALGYPGRGDGNSRMRGCEVH*TVGPLE Trigger: TTCCAGGGGGCCCACTGTTCAATGGACTTCACAACC...TCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAGCTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | CCAGAAGGTGACATACTCTGTTCCCCAGTGCCAGCCCTGAGGGGAAGAGGTTTGAGTGCCGACAGGTGCTaGCCCTTGCAGAAAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: PEGDILCSPVPALRGRGLSADRC*PLQKNS Trigger: AGAGTTTTTCTGCAAGGGCCAGCACCTGTCGGCACT...CAAACCTCTTCCCCTCAGGGCTGGCACTGGGGAACAGAGTATGTCACCTTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGCTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGACTCCTTGCCGAATCCTaGCCAGCCTCTCTGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GQLALGYPGRGDGNSRMRLLAES*PASLFQ Trigger: TTGGAACAGAGAGGCTGGCCAGGATTCGGCAAGGAG...TCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAGCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CCAGAAGGTGACATACTCTGTTCCCCAGTGCCAGCCCTGAGGGGAAGAGGTTTGCATAATGTTCACAGCTaGGGAAAGCTGCACTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PEGDILCSPVPALRGRGLHNVHS*GKLHCS Trigger: GCTGCAGTGCAGCTTTCCTCAGCTGTGAACATTATG...CAAACCTCTTCCCCTCAGGGCTGGCACTGGGGAACAGAGTATGTCACCTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR GCA 90 bp | AGGTTGCCCGCTGCTATCCCTGGTCTAGCTGCCTCAACTAAAGGAAGCCCAGAAGAAAGCACACTGGCCTaGTGGGCTTCAGTGCATTCA | + |
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Preference number: 4 (lower is better) Translates to: RLPAAIPGLAASTKGSPEESTLA*WASVHS Trigger: TGAATGCACTGAAGCCCAGCAGGCCAGTGTGCTTTC...TTCTGGGCTTCCTTTAGTTGAGGCAGCTAGACCAGGGATAGCAGCGGGCAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTCTTTGGGAGGCGGTATaGCAGAGAAAGACTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: LALGYPGRGDGNSRMRAPLWEAV*QRKTPP Trigger: AGGTGGAGTCTTTCTCTGTCATACCGCCTCCCAAAG...AGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | AGGTTGCCCGCTGCTATCCCTGGTCTAGCTGCCTCAACTAAAGGAAGCCCAGAAAGCAACCAATCTGGGTaGTGCCAAAGTCAATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RLPAAIPGLAASTKGSPESNQSG*CQSQWS Trigger: GCTCCATTGACTTTGGCATCACCCAGATTGGTTGCT...TTCTGGGCTTCCTTTAGTTGAGGCAGCTAGACCAGGGATAGCAGCGGGCAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | GGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGGTTGCCCGCTGTCTGTGACGGTGGTCTaGAGCCAGGTGCTTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GRNMYRPEKAKGLAGCPLSVTVV*SQVLWS Trigger: ACTCCAAAGCACCTGGCTTCAGACCACCGTCACAGA...CAGCGGGCAACCTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | GGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGGTTGCCCGCTGAGTGGAAACTCTCTGTaGCGGTGGTCTGAAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GRNMYRPEKAKGLAGCPLSGNSL*RWSEAR Trigger: CCTGGCTTCAGACCACCGTCACAGAGAGTTTCCACT...CAGCGGGCAACCTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CCAGAAGGTGACATACTCTGTTCCCCAGTGCCAGCCCTGAGGGGAAGAGGTTTGTTTGGTCTGGTTAGCTaGGGTGATGGAATTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PEGDILCSPVPALRGRGLFGLVS*GDGISP Trigger: GGGAGAAATTCCATCACCTCAGCTAACCAGACCAAA...CAAACCTCTTCCCCTCAGGGCTGGCACTGGGGAACAGAGTATGTCACCTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGCTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGACTCCTGAGGTGTTGCTaGCAGAGCTATTACAACTGG | + |
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Preference number: 4 (lower is better) Translates to: GQLALGYPGRGDGNSRMRLLRCC*QSYYNW Trigger: CCAGTTGTAATAGCTCTGCCAGCAACACCTCAGGAG...TCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAGCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | CCAGAAGGTGACATACTCTGTTCCCCAGTGCCAGCCCTGAGGGGAAGAGGTTTGAGATGGCAACCCAACTaGACTAGTGGAAACTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PEGDILCSPVPALRGRGLRWQPN*TSGNSL Trigger: CAGAGAGTTTCCACTAGTCCAGTTGGGTTGCCATCT...CAAACCTCTTCCCCTCAGGGCTGGCACTGGGGAACAGAGTATGTCACCTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | GGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGGGAGGGTGGTACTGCTaGGAGAGTTGTGACCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GRGLGGICIDQRKLKAWQGGWYC*ESCDPG Trigger: CCCGGGGTCACAACTCTCCCAGCAGTACCACCCTCC...CTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | AGGTTGCCCGCTGCTATCCCTGGTCTAGCTGCCTCAACTAAAGGAAGCCCAGAACAATGGAGCAGTTTCTaGGTTCGAGGCAAAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RLPAAIPGLAASTKGSPEQWSSF*VRGKRH Trigger: ATGCCTTTTGCCTCGAACTCAGAAACTGCTCCATTG...TTCTGGGCTTCCTTTAGTTGAGGCAGCTAGACCAGGGATAGCAGCGGGCAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | GGCCAGCTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGACTCAGGAAAGCTGACTaGACAGTGAAAGAGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: GQLALGYPGRGDGNSRMRLRKAD*TVKEAS Trigger: AGATGCCTCTTTCACTGTTCAGTCAGCTTTCCTGAG...TCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAGCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | AGTGCCAGCCCTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAACTTGAGAGCAGGGACTaGAGAAAGCACACTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SASPEGKRFGRNMYRPEKLESRD*RKHTGL Trigger: CAGGCCAGTGTGCTTTCTTCAGTCCCTGCTCTCAAG...TTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAGGGCTGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | GGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTGAGGAGGAGGGGTACTaGATGGATGAGCCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GYPGRGDGNSRMRAPSITEEEGY*MDEPLE Trigger: CTCCAGAGGCTCATCCATCCAGTACCCCTCCTCCTC...AGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | AGGTTGCCCGCTGCTATCCCTGGTCTAGCTGCCTCAACTAAAGGAAGCCCAGAAGCCTCTCTGTTCCAATaGGAGGAGGTATCTTTCGAT | + |
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Preference number: 4 (lower is better) Translates to: RLPAAIPGLAASTKGSPEASLFQ*EEVSFD Trigger: ATCGAAAGATACCTCCTCCCATTGGAACAGAGAGGC...TTCTGGGCTTCCTTTAGTTGAGGCAGCTAGACCAGGGATAGCAGCGGGCAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | GGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGGTTGCCCGCTGCTCCAACTTGGAGGGTaGTACTGCTGGGAGAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GRNMYRPEKAKGLAGCPLLQLGG*YCWESC Trigger: ACAACTCTCCCAGCAGTACCACCCTCCAAGTTGGAG...CAGCGGGCAACCTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | GGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACAGGGCAGCCGGTGGACCTTaGGGTGGTGTTAAAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: GRGDGNSRMRAPSITPYRAAGGP*GGVKGT Trigger: AGTTCCTTTAACACCACCTCAAGGTCCACCGGCTGC...CCTGTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTGTTACTCAGGAAAGCTaGCTGAACAGTGAAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LALGYPGRGDGNSRMRAPVTQES*LNSERG Trigger: GCCTCTTTCACTGTTCAGTCAGCTTTCCTGAGTAAC...AGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | AGTGCCAGCCCTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAAGCATTGACACCAAATaGCCAGATCCCACCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SASPEGKRFGRNMYRPEKSIDTK*PDPTVS Trigger: GGACACGGTGGGATCTGGTCATTTGGTGTCAATGCT...TTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAGGGCTGGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTACTTTCTGTCGTAGATaGTCCTGGTGCCTCTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: LALGYPGRGDGNSRMRAPTFCRR*SWCLWL Trigger: TAACCAGAGGCACCAGGATCATCTACGACAGAAAGT...AGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | AGGTTGCCCGCTGCTATCCCTGGTCTAGCTGCCTCAACTAAAGGAAGCCCAGAAATCATCTCTCTCCATTaGCTGATGCTGGGAGAATGT | + |
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Preference number: 4 (lower is better) Translates to: RLPAAIPGLAASTKGSPEIISLH*LMLGEC Trigger: ACATTCTCCCAGCATCAGCCAATGGAGAGAGATGAT...TTCTGGGCTTCCTTTAGTTGAGGCAGCTAGACCAGGGATAGCAGCGGGCAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACAGCACACTGGCCTGCTaGGCTTCAGTGCATTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PGRGDGNSRMRAPSITPYSTLAC*ASVHSA Trigger: AGCTGAATGCACTGAAGCCCAGCAGGCCAGTGTGCT...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | GGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACAGGGAGGTGTCCGGGCAATaGGTGAGTTCTTGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: GRGDGNSRMRAPSITPYREVSGQ*VSSCTP Trigger: TGGAGTGCAAGAACTCACCCATTGCCCGGACACCTC...CCTGTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| 3UTR CAA 72 bp | CTCTGTTCCCCAGTGCCAGCCCTGAGGGGAAGAGGTTaGGGAGGAATATGTATAGACCAGAGAAAGCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: LCSPVPALRGRG*GGICIDQRKLK Trigger: CTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAGGGCTGGCACTGGGGAACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | GGCCAGCTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAAGACTCCACCTTTTGTaGAGAAAGTGGTACTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: GQLALGYPGRGDGNSRMRRLHLL*RKWYLS Trigger: ACTCAAGTACCACTTTCTTCACAAAAGGTGGAGTCT...TCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAGCTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTATCTGCAGCAACTCTTaGGGGCAGAGGTCCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: LRGRGLGGICIDQRKLKAICSNS*GQRSIS Trigger: GGAGATGGACCTCTGCCCTCAAGAGTTGCTGCAGAT...AGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTGGTATCTTTCGATCCTaGCTGGCACTGTTTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LALGYPGRGDGNSRMRAPGIFRS*LALFPF Trigger: AAAAGGAAACAGTGCCAGTCAGGATCGAAAGATACC...AGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | AGTGCCAGCCCTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAAGGCCCATTGGCTGGTaGAAAATGTTAGTGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: SASPEGKRFGRNMYRPEKRPIGW*KMLVGA Trigger: AGCTCCCACTAACATTTTTCACCAGCCAATGGGCCT...TTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAGGGCTGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACGCAGGATCTGGGTTGTaGAGTCCATTGAACAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PGRGDGNSRMRAPSITPYAGSGL*SPLNSG Trigger: CCCACTGTTCAATGGACTTCACAACCCAGATCCTGC...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACTGGTGCCTCCATACATaGAAATCGGCAGGCCCATTG | + |
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Preference number: 4 (lower is better) Translates to: PGRGDGNSRMRAPSITPYWCLHT*KSAGPL Trigger: CAATGGGCCTGCCGATTTCCATGTATGGAGGCACCA...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACTCTCTCTCCATTGGCTaGTGCTGGGAGAATGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: PGRGDGNSRMRAPSITPYSLSIG*CWENVL Trigger: AAGCACATTCTCCCAGCATCAGCCAATGGAGAGAGA...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR TCA 90 bp | GGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTGGGAGCTACCATTCCTaGATCATCTCTCTCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: GYPGRGDGNSRMRAPSITGSYHS*IISLHW Trigger: CCAATGGAGAGAGATGATTCAGGAATGGTAGCTCCC...AGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | GGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGAGGGCTGGTCCTGTGTaGACACTTTCTCTTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GRGLGGICIDQRKLKAWQRAGPV*TLSLWE Trigger: CTCCCAAAGAGAAAGTGTCCACACAGGACCAGCCCT...CTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | CTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCTTTCGATCCTGACTaGCACTGTTTCCTTTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LALGYPGRGDGNSRMRAPSFDPD*HCFLLV Trigger: AACCAAAAGGAAACAGTGCCAGTCAGGATCGAAAGA...AGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | GGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGGTTGCCCGCTGAGAAGAGGACACCATTaGCTGTCCAACTCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GRNMYRPEKAKGLAGCPLRRGHH*LSNSLL Trigger: AAGAAGAGAGTTGGACAGCCAATGGTGTCCTCTTCT...CAGCGGGCAACCTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTCAGCAACTCCAACTTaGAGGGTGGTACTGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRGRGLGGICIDQRKLKASATPT*RVVLLG Trigger: TCCCAGCAGTACCACCCTCCAAGTTGGAGTTGCTGA...AGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR TCA 90 bp | GGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTAAGCTGACTGAACAGTaGAAGAGGCATCTGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GYPGRGDGNSRMRAPSITKLTEQ*KRHLQQ Trigger: TTGCTGCAGATGCCTCTTTCACTGTTCAGTCAGCTT...AGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCCAGCCCTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGGGTCTGATAACTGTTaGTGCATTGGATGGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SASPEGKRFGRNMYRPEKGSDNC*CIGWFP Trigger: AGGAAACCATCCAATGCATCAACAGTTATCAGACCC...TTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAGGGCTGGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGAGGTTTGTCAAGGGCTaGTCCTGTGTGGACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGKRFGRNMYRPEKAKGLRFVKG*SCVDTF Trigger: GAAAGTGTCCACACAGGACCAGCCCTTGACAAACCT...CAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAGCTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGACAAAGACTTATTTGCTaGGTTTATGTGCACTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQLALGYPGRGDGNSRMRQRLIC*VYVHLR Trigger: TCTCAAGTGCACATAAACCCAGCAAATAAGTCTTTG...TCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAGCTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGCAGGAGCAACAAAACTaGTCCCTACAGGTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRGLGGICIDQRKLKAWQQEQQN*SLQVLV Trigger: CACAAGCACCTGTAGGGACCAGTTTTGTTGCTCCTG...CTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGGTTGCCCGCTGGGGTTTATGTGCACTTaGGAACCATTCATAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRNMYRPEKAKGLAGCPLGFMCT*EPFIMF Trigger: GAACATTATGAATGGTTCTCAAGTGCACATAAACCC...CAGCGGGCAACCTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGGTTGCCCGCTGAAAAGACTACTGAAGTaGTTAAAAAGTGTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRNMYRPEKAKGLAGCPLKRLLK*LKSVAG Trigger: CCCAGCCACACTTTTTAATCACTTCAGTAGTCTTTT...CAGCGGGCAACCTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACTGGTTAGCTGGCACCTaGCCACTATCAAAAAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: PGRGDGNSRMRAPSITPYWLAGT*PLSKRL Trigger: TAGTCTTTTTGATAGTGGTCAGGTGCCAGCTAACCA...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACAGGATGGAATTTCTCCCTTaGGAGCAGGGACTGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGNSRMRAPSITPYRMEFLP*EQGLKK Trigger: TTTCTTCAGTCCCTGCTCTCAAGGGAGAAATTCCAT...CCTGTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACAGGATTGACTGGGGATCCTaGTGCATAGTTGCATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGNSRMRAPSITPYRIDWGS*CIVAFG Trigger: ACCAAATGCAACTATGCACCAGGATCCCCAGTCAAT...CCTGTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTGGCTGGGCCGAATGTTaGTTGCAAAGACTTATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGRGLGGICIDQRKLKAGWAEC*LQRLIC Trigger: GCAAATAAGTCTTTGCAACCAACATTCGGCCCAGCC...AGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTGGCACTGTTTCCTTTTaGTTGTTGGCCCAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRGRGLGGICIDQRKLKAGTVSF*LLAQCW Trigger: CCAACATTGGGCCAACAACCAAAAGGAAACAGTGCC...AGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACAGGATTGGTAACAAAAATTaGCTGGGGATCCTGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGNSRMRAPSITPYRIGNKN*LGILVH Trigger: ATGCACCAGGATCCCCAGTCAATTTTTGTTACCAAT...CCTGTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGCTCTCTTCTTTGGTCTaGTTAGCTGAGGTGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGLGGICIDQRKLKAWQLSSLV*LAEVME Trigger: TTCCATCACCTCAGCTAACCAGACCAAAGAAGAGAG...CTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACGTAACAAAAATTGACTaGGGATCCTGGTGCATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRGDGNSRMRAPSITPYVTKID*GSWCIV Trigger: AACTATGCACCAGGATCCCCAGTCAATTTTTGTTAC...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTATTAAAAAGTGTGGCTaGGCCGAATGTTGGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRGRGLGGICIDQRKLKAIKKCG*AECWLQ Trigger: TTGCAACCAACATTCGGCCCAGCCACACTTTTTAAT...AGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTAGTAAAAAGAACCTCTaGGCTGCATTCGATGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRGRGLGGICIDQRKLKASKKNL*AAFDEK Trigger: TTTCTCATCGAATGCAGCCCAGAGGTTCTTTTTACT...AGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS CCA 90 bp | GCTGTCCCTCCTCTTGTGTATTACCCGGAGGAGGAGGAGGGGTACTaGATGGATGAGCCTCTGGAGCTCCTGAGGTGTTGCTGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVPPLVYYPEEEEGY*MDEPLELLRCCWQS Trigger: GCTCTGCCAGCAACACCTCAGGAGCTCCAGAGGCTCATCCATCCAGTACCCCTCCTCCTCCTCCGGGTAATACACAAGAGGAGGGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS CCA 90 bp | AGGAGTGCCGACAGGTGCTGGCCCTTGCAGAAAAACTCTTGTCCCTaGTATGCCAGAGAAACTTGTCAGAGGAGCAGCAGCAGATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSADRCWPLQKNSCP*YARETCQRSSSRWG Trigger: TCCCCATCTGCTGCTGCTCCTCTGACAAGTTTCTCTGGCATACCAGGGACAAGAGTTTTTCTGCAAGGGCCAGCACCTGTCGGCACTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS CCA 90 bp | TACCTCTGTCTGCTTCTGTTCCTTCAGCAACTCCAACTTGGAGGGTaGTACTGCTGGGAGAGTTGTGACCCCGGGAATCTGAGGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YLCLLLFLQQLQLGG*YCWESCDPGNLREA Trigger: TGCCTCCCTCAGATTCCCGGGGTCACAACTCTCCCAGCAGTACCACCCTCCAAGTTGGAGTTGCTGAAGGAACAGAAGCAGACAGAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS CCA 90 bp | CACCAAATGACCAGATCCCACCGTGTCCAACAGGAGCAACAAAACTaGTCCCTACAGGTGCTTGTGCAACAGAGCCTCCTTGCCGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: HQMTRSHRVQQEQQN*SLQVLVQQSLLAES Trigger: GGATTCGGCAAGGAGGCTCTGTTGCACAAGCACCTGTAGGGACCAGTTTTGTTGCTCCTGTTGGACACGGTGGGATCTGGTCATTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTGTATGCCAGAGAAACTaGTCAGAGGAGCAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LALGYPGRGDGNSRMRAPVCQRN*SEEQQQ Trigger: CTGCTGCTGCTCCTCTGACAAGTTTCTCTGGCATAC...AGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS CCA 90 bp | CAACTGGTAGCTGCTGGAGATGGTGTACATAGGTTTGTCAAGGGCTaGTCCTGTGTGGACACTTTCTCTTTGGGAGGCGGTATGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLVAAGDGVHRFVKG*SCVDTFSLGGGMTE Trigger: CTCTGTCATACCGCCTCCCAAAGAGAAAGTGTCCACACAGGACCAGCCCTTGACAAACCTATGTACACCATCTCCAGCAGCTACCAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS CCA 90 bp | AGTTCGAGGCAAAAGGCATTGACACAGGACTTAAATCAGATGCCTTaGACGGCTGTCCCTCCTCTTGTGTATTACCCGGAGGAGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSRQKALTQDLNQMP*TAVPPLVYYPEEEE Trigger: CTCCTCCTCCTCCGGGTAATACACAAGAGGAGGGACAGCCGTCCAAGGCATCTGATTTAAGTCCTGTGTCAATGCCTTTTGCCTCGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS CCA 90 bp | CCAGCCTCTCTGTTCCAATGGGAGGAGGTATCTTTCGATCCTGACTaGCACTGTTTCCTTTTGGTTGTTGGCCCAATGTTGGAGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PASLFQWEEVSFDPD*HCFLLVVGPMLEVL Trigger: CAGCACCTCCAACATTGGGCCAACAACCAAAAGGAAACAGTGCCAGTCAGGATCGAAAGATACCTCCTCCCATTGGAACAGAGAGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCCCGCTGCTATCCCTGGTCTAGCTGCCTCAACTAAAGGAAGCCCAGAATGGGCCGAATGTTGGTaGCAAAGACTTATTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLPAAIPGLAASTKGSPEWAECW*QRLICW Trigger: CCAGCAAATAAGTCTTTGCAACCAACATTCGGCCCA...TTCTGGGCTTCCTTTAGTTGAGGCAGCTAGACCAGGGATAGCAGCGGGCAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGTCCATCTCCCCACCCTaGGTTAGCTGGCACCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GRGLGGICIDQRKLKAWQSISPP*VSWHLT Trigger: GGTCAGGTGCCAGCTAACCAAGGGTGGGGAGATGGA...CTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCCCGCTGCTATCCCTGGTCTAGCTGCCTCAACTAAAGGAAGCCCAGAACTTGCAGAAAAACTCTaGTCCCTGGTATGCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLPAAIPGLAASTKGSPELAEKL*SLVCQR Trigger: TCTCTGGCATACCAGGGACAAGAGTTTTTCTGCAAG...TTCTGGGCTTCCTTTAGTTGAGGCAGCTAGACCAGGGATAGCAGCGGGCAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAGCTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGATGGCACTGTTTCCTTTaGGTTGTTGGCCCAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GQLALGYPGRGDGNSRMRWHCFL*VVGPML Trigger: CAACATTGGGCCAACAACCAAAAGGAAACAGTGCCA...TCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAGCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | GGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCTGAAGCCAGGTGCTTaGGAGTTGTCAGGGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GYPGRGDGNSRMRAPSITLKPGA*ELSGCT Trigger: TGTGCACCCTGACAACTCCAAAGCACCTGGCTTCAG...AGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTGATGGAATTTCTCCCTaGAGAGCAGGGACTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LALGYPGRGDGNSRMRAPDGISP*RAGTEE Trigger: TTCTTCAGTCCCTGCTCTCAAGGGAGAAATTCCATC...AGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS TCA 90 bp | GAGGACACCATTGGCTGTCCAACTCTCTTCTTTGGTCTGGTTAGCTaGGGTGATGGAATTTCTCCCTTGAGAGCAGGGACTGAAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EDTIGCPTLFFGLVS*GDGISPLRAGTEES Trigger: GCTTTCTTCAGTCCCTGCTCTCAAGGGAGAAATTCCATCACCTCAGCTAACCAGACCAAAGAAGAGAGTTGGACAGCCAATGGTGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCCAGCCCTGAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAATGGTGTACATAGGTTaGTCAAGGGCTGGTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SASPEGKRFGRNMYRPEKMVYIG*SRAGPV Trigger: CACAGGACCAGCCCTTGACAAACCTATGTACACCAT...TTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTCAGGGCTGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACGGAGCTCCTGAGGTGTaGCTGGCAGAGCTATTACAA | + |
|
Preference number: 5 (lower is better) Translates to: PGRGDGNSRMRAPSITPYGAPEV*LAELLQ Trigger: TTGTAATAGCTCTGCCAGCAACACCTCAGGAGCTCC...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCGAGGCAAAAGGCATaGACACAGGACTTAAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LALGYPGRGDGNSRMRAPSRQKA*TQDLNQ Trigger: CTGATTTAAGTCCTGTGTCAATGCCTTTTGCCTCGA...AGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACATGTGTTTGAGGCGCTaGTCCAAGGGTGGGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGRGDGNSRMRAPSITPYMCLRR*SKGGEK Trigger: TTTCTCCCCACCCTTGGACAAGCGCCTCAAACACAT...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGTTGTTGGCCCAATGTaGGAGGTGCTGAAGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGKRFGRNMYRPEKAKGLVVGPM*EVLKWL Trigger: CAGCCACTTCAGCACCTCCAACATTGGGCCAACAAC...CAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCTTGGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTCCTTCTGACATAGCATaGACACCAAATGACCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LALGYPGRGDGNSRMRAPPSDIA*TPNDQI Trigger: GATCTGGTCATTTGGTGTCAATGCTATGTCAGAAGG...AGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCCAAGGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS CCA 90 bp | GGGAGAAAAATGTTGTCTGTTGAAACTAGGAGTGCCGACAGGTGCTaGCCCTTGCAGAAAAACTCTTGTCCCTGGTATGCCAGAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GRKMLSVETRSADRC*PLQKNSCPWYARET Trigger: AGTTTCTCTGGCATACCAGGGACAAGAGTTTTTCTGCAAGGGCCAGCACCTGTCGGCACTCCTAGTTTCAACAGACAACATTTTTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS CCA 90 bp | GATGGAATAGGAGAGTCACATGTGTTTGAGGCGCTTGTCCAAGGGTaGGGAGAAAAATGTTGTCTGTTGAAACTAGGAGTGCCGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: DGIGESHVFEALVQG*GEKCCLLKLGVPTG Trigger: ACCTGTCGGCACTCCTAGTTTCAACAGACAACATTTTTCTCCCCACCCTTGGACAAGCGCCTCAAACACATGTGACTCTCCTATTCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACGCAGCAGATGGGGAATaGCCTGATGGGTCAATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PGRGDGNSRMRAPSITPYAADGE*PDGSID Trigger: ATCTATTGACCCATCAGGCAATTCCCCATCTGCTGC...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGAGAGTCACATGTGTTaGAGGCGCTTGTCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGKRFGRNMYRPEKAKGLESHMC*RRLSKG Trigger: ACCCTTGGACAAGCGCCTCAAACACATGTGACTCTC...CAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS CCA 90 bp | ACTGAGGTAAACTACCAGTGTCCCGATTATCAGCAGCAACCAATCTaGGTGATGCCAAAGTCAATGGAGCAGTTTCTGAGTTCGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TEVNYQCPDYQQQPI*VMPKSMEQFLSSRQ Trigger: TTGCCTCGAACTCAGAAACTGCTCCATTGACTTTGGCATCACCCAGATTGGTTGCTGCTGATAATCGGGACACTGGTAGTTTACCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACTGGCTGGGCCGAATGTaGGTTGCAAAGACTTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGRGDGNSRMRAPSITPYWLGRM*VAKTYL Trigger: CAAATAAGTCTTTGCAACCAACATTCGGCCCAGCCA...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTCCATACAATCATCTCTCTCCATaGGCTGATGCTGGGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: PGRGDGNSRMRAPSITPYNHLSP*ADAGRM Trigger: CATTCTCCCAGCATCAGCCAATGGAGAGAGATGATT...GTATGGAGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGTCCAACTCTCTTCTTaGGTCTGGTTAGCTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGKRFGRNMYRPEKAKGLVQLSS*VWLAEV Trigger: CACCTCAGCTAACCAGACCAAAGAAGAGAGTTGGAC...CAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CAA 90 bp | GGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGGTTGCCCGCTGGTTGCAAAGACTTATTaGCTGGGTTTATGTGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: GRNMYRPEKAKGLAGCPLVAKTY*LGLCAL Trigger: AAGTGCACATAAACCCAGCAAATAAGTCTTTGCAAC...CAGCGGGCAACCTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CAA 90 bp | GGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGGTTGCCCGCTGGTTAAAGGAACTGGATaGGTAACAAAAATTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRNMYRPEKAKGLAGCPLVKGTG*VTKIDW Trigger: CCAGTCAATTTTTGTTACCAATCCAGTTCCTTTAAC...CAGCGGGCAACCTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CAA 90 bp | GGAAGAGGTTTGGGAGGAATATGTATAGACCAGAGAAAGCTAAAGGCTTGGCAGGAAAAATGTTGTCTGTaGAAACTAGGAGTGCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: GRGLGGICIDQRKLKAWQEKCCL*KLGVPT Trigger: TGTCGGCACTCCTAGTTTCAACAGACAACATTTTTC...CTGCCAAGCCTTTAGCTTTCTCTGGTCTATACATATTCCTCCCAAACCTCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS-3UTR CAA 90 bp | GGATACCCAGGAAGAGGTGATGGCAATAGTAGGATGAGAGCTCCTTCCATTACTTGGGTTTATGTGCACTaGAGAACCATTCATAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: GYPGRGDGNSRMRAPSITWVYVH*RTIHNV Trigger: AACATTATGAATGGTTCTCAAGTGCACATAAACCCA...AGTAATGGAAGGAGCTCTCATCCTACTATTGCCATCACCTCTTCCTGGGTATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 90 bp | AAAAAGACTACTGAAGTGATTAAAAAGTGTGGCTGGGCCGAATGTTaGTTGCAAAGACTTATTTGCTGGGTTTATGTGCACTTGAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: KKTTEVIKKCGWAEC*LQRLICWVYVHLRT Trigger: GGTTCTCAAGTGCACATAAACCCAGCAAATAAGTCTTTGCAACCAACATTCGGCCCAGCCACACTTTTTAATCACTTCAGTAGTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 90 bp | CTGACCACTATCAAAAAGACTACTGAAGTGATTAAAAAGTGTGGCTaGGCCGAATGTTGGTTGCAAAGACTTATTTGCTGGGTTTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTTIKKTTEVIKKCG*AECWLQRLICWVYV Trigger: CACATAAACCCAGCAAATAAGTCTTTGCAACCAACATTCGGCCCAGCCACACTTTTTAATCACTTCAGTAGTCTTTTTGATAGTGGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 90 bp | CCCACCGTGTCCAACAGGAGCAACAAAACTGGTCCCTACAGGTGCTaGTGCAACAGAGCCTCCTTGCCGAATCCTGGCCAGCCTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PTVSNRSNKTGPYRC*CNRASLPNPGQPLC Trigger: ACAGAGAGGCTGGCCAGGATTCGGCAAGGAGGCTCTGTTGCACAAGCACCTGTAGGGACCAGTTTTGTTGCTCCTGTTGGACACGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | CTGAGGGAGGCAGCAGGGAGGTGTCCGGGCAATGGGTaGGTTCTTGCACTCCAGCAGGAACTTTCTGTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: LREAAGRCPGNG*VLALQQELSVV Trigger: TACGACAGAAAGTTCCTGCTGGAGTGCAAGAACTCACCCATTGCCCGGACACCTCCCTGCTGCCTCCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS GCA 72 bp | CTGTTCCTTCAGCAACTCCAACTTGGAGGGTGGTACTaGTGGGAGAGTTGTGACCCCGGGAATCTGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LFLQQLQLGGWY*WESCDPGNLRE Trigger: CTCCCTCAGATTCCCGGGGTCACAACTCTCCCAGCAGTACCACCCTCCAAGTTGGAGTTGCTGAAGGAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 72 bp | TTCCTTCAGCAACTCCAACTTGGAGGGTGGTACTGCTaGGAGAGTTGTGACCCCGGGAATCTGAGGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FLQQLQLGGWYC*ESCDPGNLREA Trigger: TGCCTCCCTCAGATTCCCGGGGTCACAACTCTCCCAGCAGTACCACCCTCCAAGTTGGAGTTGCTGAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | AGGAGGGGTACTGGATGGATGAGCCTCTGGAGCTCCTaGGGTGTTGCTGGCAGAGCTATTACAACTGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRGTGWMSLWSS*GVAGRAITTGS Trigger: GCTACCAGTTGTAATAGCTCTGCCAGCAACACCTCAGGAGCTCCAGAGGCTCATCCATCCAGTACCCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS GCA 72 bp | AACAGGAGCAACAAAACTGGTCCCTACAGGTGCTTGTaGAACAGAGCCTCCTTGCCGAATCCTGGCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: NRSNKTGPYRCL*NRASLPNPGQP Trigger: AGGCTGGCCAGGATTCGGCAAGGAGGCTCTGTTGCACAAGCACCTGTAGGGACCAGTTTTGTTGCTCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS GCA 72 bp | GTGTCCAACAGGAGCAACAAAACTGGTCCCTACAGGTaGTTGTGCAACAGAGCCTCCTTGCCGAATCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSNRSNKTGPYR*LCNRASLPNPG Trigger: GCCAGGATTCGGCAAGGAGGCTCTGTTGCACAAGCACCTGTAGGGACCAGTTTTGTTGCTCCTGTTGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 72 bp | CTGCTTCTGTTCCTTCAGCAACTCCAACTTGGAGGGTaGTACTGCTGGGAGAGTTGTGACCCCGGGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLFLQQLQLGG*YCWESCDPGNL Trigger: CAGATTCCCGGGGTCACAACTCTCCCAGCAGTACCACCCTCCAAGTTGGAGTTGCTGAAGGAACAGAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 72 bp | GCGCTTGTCCAAGGGTGGGGAGAAAAATGTTGTCTGTaGAAACTAGGAGTGCCGACAGGTGCTGGCCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALVQGWGEKCCL*KLGVPTGAGPC Trigger: GCAAGGGCCAGCACCTGTCGGCACTCCTAGTTTCAACAGACAACATTTTTCTCCCCACCCTTGGACAAGCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 72 bp | TCCAACAGGAGCAACAAAACTGGTCCCTACAGGTGCTaGTGCAACAGAGCCTCCTTGCCGAATCCTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SNRSNKTGPYRC*CNRASLPNPGQ Trigger: CTGGCCAGGATTCGGCAAGGAGGCTCTGTTGCACAAGCACCTGTAGGGACCAGTTTTGTTGCTCCTGTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 90 bp | AGCAACAAAACTGGTCCCTACAGGTGCTTGTGCAACAGAGCCTCCTaGCCGAATCCTGGCCAGCCTCTCTGTTCCAATGGGAGGAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SNKTGPYRCLCNRAS*PNPGQPLCSNGRRY Trigger: ATACCTCCTCCCATTGGAACAGAGAGGCTGGCCAGGATTCGGCAAGGAGGCTCTGTTGCACAAGCACCTGTAGGGACCAGTTTTGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 72 bp | GCTGCTGGAGATGGTGTACATAGGTTTGTCAAGGGCTaGTCCTGTGTGGACACTTTCTCTTTGGGAGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AAGDGVHRFVKG*SCVDTFSLGGG Trigger: ACCGCCTCCCAAAGAGAAAGTGTCCACACAGGACCAGCCCTTGACAAACCTATGTACACCATCTCCAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 72 bp | GACAGGTGCTGGCCCTTGCAGAAAAACTCTTGTCCCTaGTATGCCAGAGAAACTTGTCAGAGGAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DRCWPLQKNSCP*YARETCQRSSS Trigger: GCTGCTGCTCCTCTGACAAGTTTCTCTGGCATACCAGGGACAAGAGTTTTTCTGCAAGGGCCAGCACCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | AGATGGCAACCCAACTGGACTAGTGGAAACTCTCTGTaGCGGTGGTCTGAAGCCAGGTGCTTTGGAGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RWQPNWTSGNSL*RWSEARCFGVV Trigger: GACAACTCCAAAGCACCTGGCTTCAGACCACCGTCACAGAGAGTTTCCACTAGTCCAGTTGGGTTGCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS GCA 72 bp | GTGCTGGCCCTTGCAGAAAAACTCTTGTCCCTGGTATaGCAGAGAAACTTGTCAGAGGAGCAGCAGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: VLALAEKLLSLV*QRNLSEEQQQM Trigger: CATCTGCTGCTGCTCCTCTGACAAGTTTCTCTGGCATACCAGGGACAAGAGTTTTTCTGCAAGGGCCAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 90 bp | GAGTTCGAGGCAAAAGGCATTGACACAGGACTTAAATCAGATGCCTaGGACGGCTGTCCCTCCTCTTGTGTATTACCCGGAGGAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: EFEAKGIDTGLKSDA*DGCPSSCVLPGGGG Trigger: TCCTCCTCCTCCGGGTAATACACAAGAGGAGGGACAGCCGTCCAAGGCATCTGATTTAAGTCCTGTGTCAATGCCTTTTGCCTCGAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 90 bp | GGACTAGTGGAAACTCTCTGTGACGGTGGTCTGAAGCCAGGTGCTTaGGAGTTGTCAGGGTGCACATTTTCCAAGTGTCCAAGTACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLVETLCDGGLKPGA*ELSGCTFSKCPSTE Trigger: CTCTGTACTTGGACACTTGGAAAATGTGCACCCTGACAACTCCAAAGCACCTGGCTTCAGACCACCGTCACAGAGAGTTTCCACTAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS GCA 72 bp | CTGTTGAAACTAGGAGTGCCGACAGGTGCTGGCCCTTaGAGAAAAACTCTTGTCCCTGGTATGCCAGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLKLGVPTGAGP*RKTLVPGMPEK Trigger: TTTCTCTGGCATACCAGGGACAAGAGTTTTTCTGCAAGGGCCAGCACCTGTCGGCACTCCTAGTTTCAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 72 bp | CTCTGTGACGGTGGTCTGAAGCCAGGTGCTTTGGAGTaGTCAGGGTGCACATTTTCCAAGTGTCCAAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: LCDGGLKPGALE*SGCTFSKCPST Trigger: TGTACTTGGACACTTGGAAAATGTGCACCCTGACAACTCCAAAGCACCTGGCTTCAGACCACCGTCACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 72 bp | TCTGTTGAAACTAGGAGTGCCGACAGGTGCTGGCCCTaGCAGAAAAACTCTTGTCCCTGGTATGCCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: SVETRSADRCWP*QKNSCPWYARE Trigger: TTCTCTGGCATACCAGGGACAAGAGTTTTTCTGCAAGGGCCAGCACCTGTCGGCACTCCTAGTTTCAACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 90 bp | GTGGAAACTCTCTGTGACGGTGGTCTGAAGCCAGGTGCTTTGGAGTaGTCAGGGTGCACATTTTCCAAGTGTCCAAGTACAGAGTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: VETLCDGGLKPGALE*SGCTFSKCPSTELL Trigger: GAGTAACTCTGTACTTGGACACTTGGAAAATGTGCACCCTGACAACTCCAAAGCACCTGGCTTCAGACCACCGTCACAGAGAGTTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 90 bp | CAATGGGAGGAGGTATCTTTCGATCCTGACTGGCACTGTTTCCTTTaGGTTGTTGGCCCAATGTTGGAGGTGCTGAAGTGGCTGAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QWEEVSFDPDWHCFL*VVGPMLEVLKWLKE Trigger: CTCTTTCAGCCACTTCAGCACCTCCAACATTGGGCCAACAACCAAAAGGAAACAGTGCCAGTCAGGATCGAAAGATACCTCCTCCCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | ACAGCTGAGGAAAGCTGCACTGCAGCCGGTGGACCTTaGGGTGGTGTTAAAGGAACTGGATTGGTAACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TAEESCTAAGGP*GGVKGTGLVTK Trigger: TTTTGTTACCAATCCAGTTCCTTTAACACCACCTCAAGGTCCACCGGCTGCAGTGCAGCTTTCCTCAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | TATGTGCACTTGAGAACCATTCATAATGTTCACAGCTaGGGAAAGCTGCACTGCAGCCGGTGGACCTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: YVHLRTIHNVHS*GKLHCSRWTLR Trigger: CCTCAAGGTCCACCGGCTGCAGTGCAGCTTTCCTCAGCTGTGAACATTATGAATGGTTCTCAAGTGCACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS GCA 72 bp | GGTGGTCTGAAGCCAGGTGCTTTGGAGTTGTCAGGGTaGACATTTTCCAAGTGTCCAAGTACAGAGTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: GGLKPGALELSG*TFSKCPSTELL Trigger: GAGTAACTCTGTACTTGGACACTTGGAAAATGTGCACCCTGACAACTCCAAAGCACCTGGCTTCAGACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 72 bp | CAAAAGGCATTGACACAGGACTTAAATCAGATGCCTTaGACGGCTGTCCCTCCTCTTGTGTATTACCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QKALTQDLNQMP*TAVPPLVYYPE Trigger: CTCCGGGTAATACACAAGAGGAGGGACAGCCGTCCAAGGCATCTGATTTAAGTCCTGTGTCAATGCCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 72 bp | TTTGTCAAGGGCTGGTCCTGTGTGGACACTTTCTCTTaGGGAGGCGGTATGACAGAGAAAGACTCCACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FVKGWSCVDTFS*GGGMTEKDSTF Trigger: AAAGGTGGAGTCTTTCTCTGTCATACCGCCTCCCAAAGAGAAAGTGTCCACACAGGACCAGCCCTTGACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 72 bp | GCAAAAGGCATTGACACAGGACTTAAATCAGATGCCTaGGACGGCTGTCCCTCCTCTTGTGTATTACCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: AKGIDTGLKSDA*DGCPSSCVLPG Trigger: TCCGGGTAATACACAAGAGGAGGGACAGCCGTCCAAGGCATCTGATTTAAGTCCTGTGTCAATGCCTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 90 bp | ATGCCAAAGTCAATGGAGCAGTTTCTGAGTTCGAGGCAAAAGGCATaGACACAGGACTTAAATCAGATGCCTTGGACGGCTGTCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MPKSMEQFLSSRQKA*TQDLNQMPWTAVPP Trigger: AGGAGGGACAGCCGTCCAAGGCATCTGATTTAAGTCCTGTGTCAATGCCTTTTGCCTCGAACTCAGAAACTGCTCCATTGACTTTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | CAAGTACAGAGTTACTCAGGAAAGCTGACTGAACAGTaGAAGAGGCATCTGCAGCAACTCTTGAGGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QVQSYSGKLTEQ*KRHLQQLLRAE Trigger: CTCTGCCCTCAAGAGTTGCTGCAGATGCCTCTTTCACTGTTCAGTCAGCTTTCCTGAGTAACTCTGTACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | CTCTCTGTTCCAATGGGAGGAGGTATCTTTCGATCCTaGCTGGCACTGTTTCCTTTTGGTTGTTGGCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LSVPMGGGIFRS*LALFPFGCWPN Trigger: ATTGGGCCAACAACCAAAAGGAAACAGTGCCAGTCAGGATCGAAAGATACCTCCTCCCATTGGAACAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | ACTTTTATCATAGGATTCCAAGCAGGATCTGGGTTGTaGAGTCCATTGAACAGTGGGCCCCCTGGAACGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TFIIGFQAGSGL*SPLNSGPPGTS Trigger: TGACGTTCCAGGGGGCCCACTGTTCAATGGACTTCACAACCCAGATCCTGCTTGGAATCCTATGATAAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | ATTGGCTGTCCAACTCTCTTCTTTGGTCTGGTTAGCTaGGGTGATGGAATTTCTCCCTTGAGAGCAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: IGCPTLFFGLVS*GDGISPLRAGT Trigger: AGTCCCTGCTCTCAAGGGAGAAATTCCATCACCTCAGCTAACCAGACCAAAGAAGAGAGTTGGACAGCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | AGTTCTTGCACTCCAGCAGGAACTTTCTGTCGTAGATaGTCCTGGTGCCTCTGGTTAGAAGAGGACACCATT | + |
|
Preference number: 6 (lower is better) Translates to: SSCTPAGTFCRR*SWCLWLEEDTI Trigger: AATGGTGTCCTCTTCTAACCAGAGGCACCAGGATCATCTACGACAGAAAGTTCCTGCTGGAGTGCAAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 72 bp | CTGTTCCAATGGGAGGAGGTATCTTTCGATCCTGACTaGCACTGTTTCCTTTTGGTTGTTGGCCCAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LFQWEEVSFDPD*HCFLLVVGPML Trigger: CAACATTGGGCCAACAACCAAAAGGAAACAGTGCCAGTCAGGATCGAAAGATACCTCCTCCCATTGGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 90 bp | GTACATAGGTTTGTCAAGGGCTGGTCCTGTGTGGACACTTTCTCTTaGGGAGGCGGTATGACAGAGAAAGACTCCACCTTTTGTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VHRFVKGWSCVDTFS*GGGMTEKDSTFCEE Trigger: TTCTTCACAAAAGGTGGAGTCTTTCTCTGTCATACCGCCTCCCAAAGAGAAAGTGTCCACACAGGACCAGCCCTTGACAAACCTATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 90 bp | AAAATGTTGTCTGTTGAAACTAGGAGTGCCGACAGGTGCTGGCCCTaGCAGAAAAACTCTTGTCCCTGGTATGCCAGAGAAACTTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KMLSVETRSADRCWP*QKNSCPWYARETCQ Trigger: CTGACAAGTTTCTCTGGCATACCAGGGACAAGAGTTTTTCTGCAAGGGCCAGCACCTGTCGGCACTCCTAGTTTCAACAGACAACATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | GGGAGGCGGTATGACAGAGAAAGACTCCACCTTTTGTaGAGAAAGTGGTACTTGAGTAGGTGCAGGCATAAA | + |
|
Preference number: 6 (lower is better) Translates to: GRRYDRERLHLL*RKWYLSRCRHK Trigger: TTTATGCCTGCACCTACTCAAGTACCACTTTCTTCACAAAAGGTGGAGTCTTTCTCTGTCATACCGCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | TGGCTGGTGAAAAATGTTAGTGGGAGCTACCATTCCTaGATCATCTCTCTCCATTGGCTGATGCTGGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: WLVKNVSGSYHS*IISLHWLMLGE Trigger: TTCTCCCAGCATCAGCCAATGGAGAGAGATGATTCAGGAATGGTAGCTCCCACTAACATTTTTCACCAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS GCA 72 bp | AAAATGTTGTCTGTTGAAACTAGGAGTGCCGACAGGTaGTGGCCCTTGCAGAAAAACTCTTGTCCCTGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: KMLSVETRSADR*WPLQKNSCPWY Trigger: ATACCAGGGACAAGAGTTTTTCTGCAAGGGCCAGCACCTGTCGGCACTCCTAGTTTCAACAGACAACATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 72 bp | TCAATGGAGCAGTTTCTGAGTTCGAGGCAAAAGGCATaGACACAGGACTTAAATCAGATGCCTTGGACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SMEQFLSSRQKA*TQDLNQMPWTA Trigger: AGCCGTCCAAGGCATCTGATTTAAGTCCTGTGTCAATGCCTTTTGCCTCGAACTCAGAAACTGCTCCATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 72 bp | GGTGTTAAAGGAACTGGATTGGTAACAAAAATTGACTaGGGATCCTGGTGCATAGTTGCATTTGGTACCACT | + |
|
Preference number: 6 (lower is better) Translates to: GVKGTGLVTKID*GSWCIVAFGTT Trigger: AGTGGTACCAAATGCAACTATGCACCAGGATCCCCAGTCAATTTTTGTTACCAATCCAGTTCCTTTAACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 72 bp | GGCTGGGCCGAATGTTGGTTGCAAAGACTTATTTGCTaGGTTTATGTGCACTTGAGAACCATTCATAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: GWAECWLQRLIC*VYVHLRTIHNV Trigger: AACATTATGAATGGTTCTCAAGTGCACATAAACCCAGCAAATAAGTCTTTGCAACCAACATTCGGCCCAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 72 bp | ACTGAAGTGATTAAAAAGTGTGGCTGGGCCGAATGTTaGTTGCAAAGACTTATTTGCTGGGTTTATGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: TEVIKKCGWAEC*LQRLICWVYVH Trigger: GTGCACATAAACCCAGCAAATAAGTCTTTGCAACCAACATTCGGCCCAGCCACACTTTTTAATCACTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 72 bp | GAAGTGATTAAAAAGTGTGGCTGGGCCGAATGTTGGTaGCAAAGACTTATTTGCTGGGTTTATGTGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: EVIKKCGWAECW*QRLICWVYVHL Trigger: CAAGTGCACATAAACCCAGCAAATAAGTCTTTGCAACCAACATTCGGCCCAGCCACACTTTTTAATCACTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS TCA 72 bp | GGTTGCAAAGACTTATTTGCTGGGTTTATGTGCACTTaGGAACCATTCATAATGTTCACAGCTGAGGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: GCKDLFAGFMCT*EPFIMFTAEES Trigger: GCTTTCCTCAGCTGTGAACATTATGAATGGTTCTCAAGTGCACATAAACCCAGCAAATAAGTCTTTGCAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CAA 90 bp | AAGACTACTGAAGTGATTAAAAAGTGTGGCTGGGCCGAATGTTGGTaGCAAAGACTTATTTGCTGGGTTTATGTGCACTTGAGAACCATT | + |
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Preference number: 6 (lower is better) Translates to: KTTEVIKKCGWAECW*QRLICWVYVHLRTI Trigger: AATGGTTCTCAAGTGCACATAAACCCAGCAAATAAGTCTTTGCAACCAACATTCGGCCCAGCCACACTTTTTAATCACTTCAGTAGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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| CDS CCA 72 bp | ATCAAAAAGACTACTGAAGTGATTAAAAAGTGTGGCTaGGCCGAATGTTGGTTGCAAAGACTTATTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: IKKTTEVIKKCG*AECWLQRLICW Trigger: CCAGCAAATAAGTCTTTGCAACCAACATTCGGCCCAGCCACACTTTTTAATCACTTCAGTAGTCTTTTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140061.8 |
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