Pregenerated sensors for MAS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068037Ensembl transcript IDs: ENSMUST00000089015.10, ENSMUST00000159223.8, ENSMUST00000161747.8, ENSMUST00000162119.8, ENSMUST00000162333.8, ENSMUST00000162389.2, ENSMUST00000165020.8, ENSMUST00000167152.8, ENSMUST00000233607.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTTATAGTTCACTGTTGATCACTACCAGACAGCTACGAGAAGAATaGGTCTTTGATAACGATAGAAAAGACAGAGCCCATCATATCACA | + |
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Preference number: 1 (lower is better) Translates to: LYSSLLITTRQLREE*VFDNDRKDRAHHIT Trigger: TGTGATATGATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTCTGGTAGTGATCAACAGTGAACTATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACCCCATGCATGTAGAATaGTTCCCTCTGTATCATAGT | + |
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Preference number: 2 (lower is better) Translates to: LPKATCLMSHRSTQQSLHPMHVE*FPLYHS Trigger: ACTATGATACAGAGGGAAGCATTCTACATGCATGGG...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCCCCATGCATGTAGAATaGTTCCCTCTGTATCATAGT | + |
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Preference number: 2 (lower is better) Translates to: DSYEKNESLITIEKTEPIPMHVE*FPLYHS Trigger: ACTATGATACAGAGGGAAGCATTCTACATGCATGGG...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| 3UTR TCA 72 bp | GAGTGGAGGAAACCAGGCTCCCCAAAGCCACTTGCCTaGTGTCACATAGGAGCACACAGCAGTCATTACACA | + |
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Preference number: 3 (lower is better) Translates to: EWRKPGSPKPLA*CHIGAHSSHYT Trigger: TGTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAGCCTGGTTTCCTCCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACTTCTCCAGGTCACATTaGGGATACTTCCTGCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: LPKATCLMSHRSTQQSLHFSRSH*GYFLLE Trigger: CTCTAGCAGGAAGTATCCCAAATGTGACCTGGAGAA...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| 3UTR TCA 72 bp | TCACTGTTGATCACTACCAGACAGCTACGAGAAGAATaGGTCTTTGATAACGATAGAAAAGACAGAGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: SLLITTRQLREE*VFDNDRKDRAH Trigger: ATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTCTGGTAGTGATCAACAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACGGGAATGGGTGGGTGTaGGCTCCCCAGGGAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHGNGWV*APQGGI Trigger: AATGCCTCCCTGGGGAGCTCACACCCACCCATTCCC...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCGGGAATGGGTGGGTGTaGGCTCCCCAGGGAGGCATT | + |
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Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVGNGWV*APQGGI Trigger: AATGCCTCCCTGGGGAGCTCACACCCACCCATTCCC...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACTGGTGCTTGGGGCGGTaGCATCTGTACCATATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHWCLGR*HLYHMG Trigger: CCCCATATGGTACAGATGCCACCGCCCCAAGCACCA...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGGGGAATGGGTGGGTGTaGGCTCCCCAGGGAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TIQSHQCMTPMHVECFPLGNGWV*APQGGI Trigger: AATGCCTCCCTGGGGAGCTCACACCCACCCATTCCC...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACGGCACCTCTCCACACTaGTGGCTGTCAGCAGATAGA | + |
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Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHGTSPH*WLSADR Trigger: TCTATCTGCTGACAGCCATCAGTGTGGAGAGGTGCC...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACAGTGCACTATGGGAATaGGTGGGTGTGAGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHSALWE*VGVSSP Trigger: TGGGGAGCTCACACCCACCCATTCCCATAGTGCACT...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACCAGGTTCCCAAAGGCTaGCCAGTACTCGTAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHQVPKG*PVLVVQ Trigger: CTGTACTACGAGTACTGGTCAGCCTTTGGGAACCTG...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCTGGTGCTTGGGGCGGTaGCATCTGTACCATATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVWCLGR*HLYHMG Trigger: CCCCATATGGTACAGATGCCACCGCCCCAAGCACCA...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCGGGAATGGGTGGGTGTaGGCTCCCCAGGGAGGCATT | + |
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Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPIGNGWV*APQGGI Trigger: AATGCCTCCCTGGGGAGCTCACACCCACCCATTCCC...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACCCAGGGAGGCATTTCTaGTGGAGGTATTCATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHPGRHF*WRYSWL Trigger: AAGCCATGAATACCTCCAGCAGAAATGCCTCCCTGG...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCCACCAAGCACGAAAGTaGCCACAGAAGGGCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVHQARK*PQKGTD Trigger: GTCTGTGCCCTTCTGTGGGCACTTTCGTGCTTGGTG...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCAGTGCACTATGGGAATaGGTGGGTGTGAGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVSALWE*VGVSSP Trigger: TGGGGAGCTCACACCCACCCATTCCCATAGTGCACT...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GGTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTGGTGCTTGGGGCGGTaGCATCTGTACCATATGGGG | + |
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Preference number: 4 (lower is better) Translates to: GNNTKSSVHDPHACRMLPWCLGR*HLYHMG Trigger: CCCCATATGGTACAGATGCCACCGCCCCAAGCACCA...GGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGATGCTGACTGGTGCTTaGGGCGGTGGCATCTGTACC | + |
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Preference number: 4 (lower is better) Translates to: TIQSHQCMTPMHVECFPLMLTGA*GGGICT Trigger: GGTACAGATGCCACCGCCCCAAGCACCAGTCAGCAT...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GGTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCATGCTGACTGGTGCTTaGGGCGGTGGCATCTGTACC | + |
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Preference number: 4 (lower is better) Translates to: GNNTKSSVHDPHACRMLPMLTGA*GGGICT Trigger: GGTACAGATGCCACCGCCCCAAGCACCAGTCAGCAT...GGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACTACAGCTTCGAAGAATaGGAGGCCCACGTGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHYSFEE*EAHVFF Trigger: GAAGAACACGTGGGCCTCCCATTCTTCGAAGCTGTA...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | GGTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCGGCACCTCTCCACACTaGTGGCTGTCAGCAGATAGA | + |
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Preference number: 4 (lower is better) Translates to: GNNTKSSVHDPHACRMLPGTSPH*WLSADR Trigger: TCTATCTGCTGACAGCCATCAGTGTGGAGAGGTGCC...GGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACCGCTGTCAATACACATaGCATACTCCATGGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHRCQYT*HTPWWS Trigger: TGACCACCATGGAGTATGTCATGTGTATTGACAGCG...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACGTTGCATTTCATCTTTaGAAGCCCTGGTCAGGACGA | + |
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Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHVAFHL*KPWSGR Trigger: TCGTCCTGACCAGGGCTTTCAAAGATGAAATGCAAC...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACAGCAAGGAGATGTTATaGAGGTTCCCAAAGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHSKEML*RFPKAD Trigger: GTCAGCCTTTGGGAACCTGCATAACATCTCCTTGCT...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACTGCTGGAGGTATTCATaGCTTTCTCTTCAGCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LPKATCLMSHRSTQQSLHCWRYS*LSLQQG Trigger: CCCTTGCTGAAGAGAAAGCCATGAATACCTCCAGCA...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GGTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCAGTGCACTATGGGAATaGGTGGGTGTGAGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GNNTKSSVHDPHACRMLPSALWE*VGVSSP Trigger: TGGGGAGCTCACACCCACCCATTCCCATAGTGCACT...GGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCGGCATCTGTACCATATaGGGTAGAGGACCGATAGGC | + |
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Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVGICTI*GRGPIG Trigger: GCCTATCGGTCCTCTACCCCATATGGTACAGATGCC...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTTGGTGCTTGGGGCGGTaGCATCTGTACCATATGGGG | + |
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Preference number: 4 (lower is better) Translates to: VTIQSHQCMTPMHVECFPWCLGR*HLYHMG Trigger: CCCCATATGGTACAGATGCCACCGCCCCAAGCACCA...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTATGCTGACTGGTGCTTaGGGCGGTGGCATCTGTACC | + |
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Preference number: 4 (lower is better) Translates to: VTIQSHQCMTPMHVECFPMLTGA*GGGICT Trigger: GGTACAGATGCCACCGCCCCAAGCACCAGTCAGCAT...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTGGCACCTCTCCACACTaGTGGCTGTCAGCAGATAGA | + |
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Preference number: 4 (lower is better) Translates to: VTIQSHQCMTPMHVECFPGTSPH*WLSADR Trigger: TCTATCTGCTGACAGCCATCAGTGTGGAGAGGTGCC...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | GGTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCCAGGTTCCCAAAGGCTaGCCAGTACTCGTAGTACAG | + |
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Preference number: 4 (lower is better) Translates to: GNNTKSSVHDPHACRMLPQVPKG*PVLVVQ Trigger: CTGTACTACGAGTACTGGTCAGCCTTTGGGAACCTG...GGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCCCAGGGAGGCATTTCTaGTGGAGGTATTCATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVPGRHF*WRYSWL Trigger: AAGCCATGAATACCTCCAGCAGAAATGCCTCCCTGG...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCACCAAGCACGAAAGTaGCCACAGAAGGGCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: VTIQSHQCMTPMHVECFPHQARK*PQKGTD Trigger: GTCTGTGCCCTTCTGTGGGCACTTTCGTGCTTGGTG...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCTCCTGGCGCCTGGGTTaGATTTCATCTTTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVSWRLG*ISSLKA Trigger: GGCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGA...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR CCA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTAGTGCACTATGGGAATaGGTGGGTGTGAGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTIQSHQCMTPMHVECFPSALWE*VGVSSP Trigger: TGGGGAGCTCACACCCACCCATTCCCATAGTGCACT...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR CCA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGGGCATCTGTACCATATaGGGTAGAGGACCGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TIQSHQCMTPMHVECFPLGICTI*GRGPIG Trigger: GCCTATCGGTCCTCTACCCCATATGGTACAGATGCC...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCATGCTGACTGGTGCTTaGGGCGGTGGCATCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPIMLTGA*GGGICT Trigger: GGTACAGATGCCACCGCCCCAAGCACCAGTCAGCAT...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCTACAGCTTCGAAGAATaGGAGGCCCACGTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVYSFEE*EAHVFF Trigger: GAAGAACACGTGGGCCTCCCATTCTTCGAAGCTGTA...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR TCA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTGGGAATGGGTGGGTGTaGGCTCCCCAGGGAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: DLNVLKLHSKHKLKASSIGNGWV*APQGGI Trigger: AATGCCTCCCTGGGGAGCTCACACCCACCCATTCCC...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR TCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCGGCACCTCTCCACACTaGTGGCTGTCAGCAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPIGTSPH*WLSADR Trigger: TCTATCTGCTGACAGCCATCAGTGTGGAGAGGTGCC...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCCGCTGTCAATACACATaGCATACTCCATGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVRCQYT*HTPWWS Trigger: TGACCACCATGGAGTATGTCATGTGTATTGACAGCG...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCGTTGCATTTCATCTTTaGAAGCCCTGGTCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVVAFHL*KPWSGR Trigger: TCGTCCTGACCAGGGCTTTCAAAGATGAAATGCAAC...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGCCAGGGAGGCATTTCTaGTGGAGGTATTCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TIQSHQCMTPMHVECFPLPGRHF*WRYSWL Trigger: AAGCCATGAATACCTCCAGCAGAAATGCCTCCCTGG...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR GCA 90 bp | GGATATTTATTGAACTTTGACAATGAGCTGGGTGCTTTGCCTACCTCATCAGACCACCAAGCACGAAAGTaGCCACAGAAGGGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GYLLNFDNELGALPTSSDHQARK*PQKGTD Trigger: GTCTGTGCCCTTCTGTGGGCACTTTCGTGCTTGGTG...GTCTGATGAGGTAGGCAAAGCACCCAGCTCATTGTCAAAGTTCAATAAATATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089015.10 |
||
| CDS-3UTR GCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCAGCAAGGAGATGTTATaGAGGTTCCCAAAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVSKEML*RFPKAD Trigger: GTCAGCCTTTGGGAACCTGCATAACATCTCCTTGCT...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR GCA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGTCCTGGCGCCTGGGTTaGATTTCATCTTTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TIQSHQCMTPMHVECFPLSWRLG*ISSLKA Trigger: GGCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGA...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCTGCTGGAGGTATTCATaGCTTTCTCTTCAGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKASSIPLFLSTISPAVCWRYS*LSLQQG Trigger: CCCTTGCTGAAGAGAAAGCCATGAATACCTCCAGCA...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTGGCATCTGTACCATATaGGGTAGAGGACCGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTIQSHQCMTPMHVECFPGICTI*GRGPIG Trigger: GCCTATCGGTCCTCTACCCCATATGGTACAGATGCC...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GGTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTACAGCTTCGAAGAATaGGAGGCCCACGTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GNNTKSSVHDPHACRMLPYSFEE*EAHVFF Trigger: GAAGAACACGTGGGCCTCCCATTCTTCGAAGCTGTA...GGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR TCA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGCTTTTAAGGACTCCCTaGAGCGCTTCTTCTTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TIQSHQCMTPMHVECFPLLLRTP*SASSYC Trigger: GCAGTAAGAAGAAGCGCTTCAGGGAGTCCTTAAAAG...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR TCA 90 bp | GGTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCCTTTTAAGGACTCCCTaGAGCGCTTCTTCTTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GNNTKSSVHDPHACRMLPLLRTP*SASSYC Trigger: GCAGTAAGAAGAAGCGCTTCAGGGAGTCCTTAAAAG...GGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGGTTGCATTTCATCTTTaGAAGCCCTGGTCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: TIQSHQCMTPMHVECFPLVAFHL*KPWSGR Trigger: TCGTCCTGACCAGGGCTTTCAAAGATGAAATGCAAC...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | GGATATTTATTGAACTTTGACAATGAGCTGGGTGCTTTGCCTACCTCATCAGACCTCATGATGACCCAGTaGACTATGGGAATGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GYLLNFDNELGALPTSSDLMMTQ*TMGMGG Trigger: CCCACCCATTCCCATAGTGCACTGGGTCATCATGAG...GTCTGATGAGGTAGGCAAAGCACCCAGCTCATTGTCAAAGTTCAATAAATATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089015.10 |
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| CDS-3UTR CCA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGTGCTGGAGGTATTCATaGCTTTCTCTTCAGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TIQSHQCMTPMHVECFPLCWRYS*LSLQQG Trigger: CCCTTGCTGAAGAGAAAGCCATGAATACCTCCAGCA...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGGGGAGGCATTTCTGCTaGAGGTATTCATGGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TIQSHQCMTPMHVECFPLGRHFC*RYSWLS Trigger: AGAAAGCCATGAATACCTCCAGCAGAAATGCCTCCC...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCGGCATCTGTACCATATaGGGTAGAGGACCGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPIGICTI*GRGPIG Trigger: GCCTATCGGTCCTCTACCCCATATGGTACAGATGCC...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCGCTGTCAATACACATaGCATACTCCATGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTIQSHQCMTPMHVECFPRCQYT*HTPWWS Trigger: TGACCACCATGGAGTATGTCATGTGTATTGACAGCG...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTTTTAAGGACTCCCTaGAGCGCTTCTTCTTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTIQSHQCMTPMHVECFPLLRTP*SASSYC Trigger: GCAGTAAGAAGAAGCGCTTCAGGGAGTCCTTAAAAG...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTGTTGCATTTCATCTTTaGAAGCCCTGGTCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: VTIQSHQCMTPMHVECFPVAFHL*KPWSGR Trigger: TCGTCCTGACCAGGGCTTTCAAAGATGAAATGCAAC...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCCCAGGGAGGCATTTCTaGTGGAGGTATTCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPIPGRHF*WRYSWL Trigger: AAGCCATGAATACCTCCAGCAGAAATGCCTCCCTGG...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTAGCAAGGAGATGTTATaGAGGTTCCCAAAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTIQSHQCMTPMHVECFPSKEML*RFPKAD Trigger: GTCAGCCTTTGGGAACCTGCATAACATCTCCTTGCT...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCTCCTGGCGCCTGGGTTaGATTTCATCTTTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPISWRLG*ISSLKA Trigger: GGCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGA...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTTGGTGCTTGGGGCGGTaGCATCTGTACCATATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DLNVLKLHSKHKLKASSIWCLGR*HLYHMG Trigger: CCCCATATGGTACAGATGCCACCGCCCCAAGCACCA...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTATGCTGACTGGTGCTTaGGGCGGTGGCATCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: DLNVLKLHSKHKLKASSIMLTGA*GGGICT Trigger: GGTACAGATGCCACCGCCCCAAGCACCAGTCAGCAT...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCTACAGCTTCGAAGAATaGGAGGCCCACGTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPIYSFEE*EAHVFF Trigger: GAAGAACACGTGGGCCTCCCATTCTTCGAAGCTGTA...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR TCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCCGCTGTCAATACACATaGCATACTCCATGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPIRCQYT*HTPWWS Trigger: TGACCACCATGGAGTATGTCATGTGTATTGACAGCG...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR TCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCCTTTTAAGGACTCCCTaGAGCGCTTCTTCTTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPILLRTP*SASSYC Trigger: GCAGTAAGAAGAAGCGCTTCAGGGAGTCCTTAAAAG...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR GCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCAGCAAGGAGATGTTATaGAGGTTCCCAAAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPISKEML*RFPKAD Trigger: GTCAGCCTTTGGGAACCTGCATAACATCTCCTTGCT...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCGGGAGGCATTTCTGCTaGAGGTATTCATGGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSYEKNESLITIEKTEPIGRHFC*RYSWLS Trigger: AGAAAGCCATGAATACCTCCAGCAGAAATGCCTCCC...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
||
| CDS-3UTR CCA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTAGTGCACTATGGGAATaGGTGGGTGTGAGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLNVLKLHSKHKLKASSISALWE*VGVSSP Trigger: TGGGGAGCTCACACCCACCCATTCCCATAGTGCACT...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTCAGGTTCCCAAAGGCTaGCCAGTACTCGTAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: DLNVLKLHSKHKLKASSIQVPKG*PVLVVQ Trigger: CTGTACTACGAGTACTGGTCAGCCTTTGGGAACCTG...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTGGCATCTGTACCATATaGGGTAGAGGACCGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLNVLKLHSKHKLKASSIGICTI*GRGPIG Trigger: GCCTATCGGTCCTCTACCCCATATGGTACAGATGCC...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR GCA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTTCCTGGCGCCTGGGTTaGATTTCATCTTTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLNVLKLHSKHKLKASSISWRLG*ISSLKA Trigger: GGCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGA...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CCA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTTACAGCTTCGAAGAATaGGAGGCCCACGTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLNVLKLHSKHKLKASSIYSFEE*EAHVFF Trigger: GAAGAACACGTGGGCCTCCCATTCTTCGAAGCTGTA...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTCTTTTAAGGACTCCCTaGAGCGCTTCTTCTTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLNVLKLHSKHKLKASSILLRTP*SASSYC Trigger: GCAGTAAGAAGAAGCGCTTCAGGGAGTCCTTAAAAG...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR TCA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTGTTGCATTTCATCTTTaGAAGCCCTGGTCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: DLNVLKLHSKHKLKASSIVAFHL*KPWSGR Trigger: TCGTCCTGACCAGGGCTTTCAAAGATGAAATGCAAC...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS GCA 90 bp | GCACTATGGGAATGGGTGGGTGTGAGCTCCCCAGGGAGGCATTTCTaGTGGAGGTATTCATGGCTTTCTCTTCAGCAAGGGATGTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: ALWEWVGVSSPGRHF*WRYSWLSLQQGMSY Trigger: ATATGACATCCCTTGCTGAAGAGAAAGCCATGAATACCTCCAGCAGAAATGCCTCCCTGGGGAGCTCACACCCACCCATTCCCATAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000089015.10 ENSMUST00000159223.8 ENSMUST00000161747.8 ENSMUST00000162119.8 ENSMUST00000162333.8 ENSMUST00000162389.2 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | CTCCCCAAAGCCACTTGCCTGATGTCACATAGGAGCACACAGCAGTCATTACACCTCCTGGCGCCTGGGTaGCATTTCATCTTTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPKATCLMSHRSTQQSLHLLAPG*HFIFES Trigger: GCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGAG...GTGTAATGACTGCTGTGTGCTCCTATGTGACATCAGGCAAGTGGCTTTGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS TCA 90 bp | ATCTGTACCATATGGGGTAGAGGACCGATAGGCACCTCTCCACACTaGTGGCTGTCAGCAGATAGAGGCCCGTGTTGTAGCCAAATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ICTIWGRGPIGTSPH*WLSADRGPCCSQIE Trigger: TTCTATTTGGCTACAACACGGGCCTCTATCTGCTGACAGCCATCAGTGTGGAGAGGTGCCTATCGGTCCTCTACCCCATATGGTACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS TCA 90 bp | GGCAGTCACTCCGAGAATGACTCTCTTCTCCGCTGTCAATACACATaGCATACTCCATGGTGGTCACCAAGCACGAAAGTGCCCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSHSENDSLLRCQYT*HTPWWSPSTKVPTE Trigger: TTCTGTGGGCACTTTCGTGCTTGGTGACCACCATGGAGTATGTCATGTGTATTGACAGCGGAGAAGAGAGTCATTCTCGGAGTGACTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS TCA 90 bp | AGGATGGCTATGAAGATGATGACCGCCCGGCAGTCACTCCGAGAATaGCTCTCTTCTCCGCTGTCAATACACATGACATACTCCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RMAMKMMTARQSLRE*LSSPLSIHMTYSMV Trigger: CACCATGGAGTATGTCATGTGTATTGACAGCGGAGAAGAGAGTCATTCTCGGAGTGACTGCCGGGCGGTCATCATCTTCATAGCCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS TCA 90 bp | GATGGTGGAGAAAAGCAAGGAGATGTTATGCAGGTTCCCAAAGGCTaGCCAGTACTCGTAGTACAGCAAGTAGAGGACCCGCATGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DGGEKQGDVMQVPKG*PVLVVQQVEDPHGH Trigger: ATGCCCATGCGGGTCCTCTACTTGCTGTACTACGAGTACTGGTCAGCCTTTGGGAACCTGCATAACATCTCCTTGCTTTTCTCCACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS CCA 90 bp | CTATGGGAATGGGTGGGTGTGAGCTCCCCAGGGAGGCATTTCTGCTaGAGGTATTCATGGCTTTCTCTTCAGCAAGGGATGTCATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWEWVGVSSPGRHFC*RYSWLSLQQGMSYL Trigger: CAAATATGACATCCCTTGCTGAAGAGAAAGCCATGAATACCTCCAGCAGAAATGCCTCCCTGGGGAGCTCACACCCACCCATTCCCATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000089015.10 ENSMUST00000159223.8 ENSMUST00000161747.8 ENSMUST00000162119.8 ENSMUST00000162333.8 ENSMUST00000162389.2 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCCTCCTGGCGCCTGGGTaGCATTTCATCTTTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KLKASSIPLFLSTISPAVLLAPG*HFIFES Trigger: GCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGAG...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | AAGCTAAAAGCCTCCAGCATTCCACTGTTTCTGTCCACAATTTCCCCTGCTGTCCCGATAATGTCACGATaGTGTAGTGATGGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLKASSIPLFLSTISPAVPIMSR*CSDGQK Trigger: CTTCTGGCCATCACTACACAATCGTGACATTATCGG...GACAGCAGGGGAAATTGTGGACAGAAACAGTGGAATGCTGGAGGCTTTTAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCGGGTTGGCGCTGCTGTaGATGGTGGAGAAAAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSYEKNESLITIEKTEPIGLALL*MVEKSK Trigger: CTTGCTTTTCTCCACCATCAACAGCAGCGCCAACCC...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGGGTTGCATTTCATCTTaGAAAGCCCTGGTCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: TIQSHQCMTPMHVECFPLGCISS*KALVRT Trigger: CGTCCTGACCAGGGCTTTCAAAGATGAAATGCAACC...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | GGTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCGGTTGCATTTCATCTTaGAAAGCCCTGGTCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: GNNTKSSVHDPHACRMLPGCISS*KALVRT Trigger: CGTCCTGACCAGGGCTTTCAAAGATGAAATGCAACC...GGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | GTAACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTCCTGGCGCCTGGGTaGCATTTCATCTTTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTIQSHQCMTPMHVECFPLLAPG*HFIFES Trigger: GCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGAG...AGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | ACAATACAAAGTCATCAGTGCATGACCCCCATGCATGTAGAATGCTTCCCTCTGCCGATAATGTCACGATaGTGTAGTGATGGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TIQSHQCMTPMHVECFPLPIMSR*CSDGQK Trigger: CTTCTGGCCATCACTACACAATCGTGACATTATCGG...CAGAGGGAAGCATTCTACATGCATGGGGGTCATGCACTGATGACTTTGTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCCTCCTGGCGCCTGGGTaGCATTTCATCTTTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: DSYEKNESLITIEKTEPILLAPG*HFIFES Trigger: GCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGAG...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCGGTTGCATTTCATCTTaGAAAGCCCTGGTCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: DSYEKNESLITIEKTEPIGCISS*KALVRT Trigger: CGTCCTGACCAGGGCTTTCAAAGATGAAATGCAACC...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | GACAGCTACGAGAAGAATGAGTCTTTGATAACGATAGAAAAGACAGAGCCCATCCCGATAATGTCACGATaGTGTAGTGATGGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSYEKNESLITIEKTEPIPIMSR*CSDGQK Trigger: CTTCTGGCCATCACTACACAATCGTGACATTATCGG...GATGGGCTCTGTCTTTTCTATCGTTATCAAAGACTCATTCTTCTCGTAGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTCTCCTGGCGCCTGGGTaGCATTTCATCTTTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLNVLKLHSKHKLKASSILLAPG*HFIFES Trigger: GCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGAG...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTGGTTGCATTTCATCTTaGAAAGCCCTGGTCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: DLNVLKLHSKHKLKASSIGCISS*KALVRT Trigger: CGTCCTGACCAGGGCTTTCAAAGATGAAATGCAACC...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS-3UTR CAA 90 bp | GATTTAAATGTGCTTAAATTGCATTCCAAGCACAAGCTAAAAGCCTCCAGCATTCCGATAATGTCACGATaGTGTAGTGATGGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DLNVLKLHSKHKLKASSIPIMSR*CSDGQK Trigger: CTTCTGGCCATCACTACACAATCGTGACATTATCGG...AATGCTGGAGGCTTTTAGCTTGTGCTTGGAATGCAATTTAAGCACATTTAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS CAA 90 bp | ACAGTGTTGCCGTTGCCCTCCTGGCGCCTGGGTTGCATTTCATCTTaGAAAGCCCTGGTCAGGACGACTTTTAAGGACTCCCTGAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TVLPLPSWRLGCISS*KALVRTTFKDSLKR Trigger: GCGCTTCAGGGAGTCCTTAAAAGTCGTCCTGACCAGGGCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGAGGGCAACGGCAACACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS TCA 72 bp | ATATGGGGTAGAGGACCGATAGGCACCTCTCCACACTaGTGGCTGTCAGCAGATAGAGGCCCGTGTTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: IWGRGPIGTSPH*WLSADRGPCCS Trigger: GCTACAACACGGGCCTCTATCTGCTGACAGCCATCAGTGTGGAGAGGTGCCTATCGGTCCTCTACCCCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS CCA 72 bp | ACAGTCTCAATGGATACAGTGTTGCCGTTGCCCTCCTaGCGCCTGGGTTGCATTTCATCTTTGAAAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TVSMDTVLPLPS*RLGCISSLKAL Trigger: CAGGGCTTTCAAAGATGAAATGCAACCCAGGCGCCAGGAGGGCAACGGCAACACTGTATCCATTGAGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS TCA 72 bp | ATGAAGATGATGACCGCCCGGCAGTCACTCCGAGAATaGCTCTCTTCTCCGCTGTCAATACACATGACATAC | + |
|
Preference number: 6 (lower is better) Translates to: MKMMTARQSLRE*LSSPLSIHMTY Trigger: GTATGTCATGTGTATTGACAGCGGAGAAGAGAGTCATTCTCGGAGTGACTGCCGGGCGGTCATCATCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS TCA 72 bp | GAAAAGCAAGGAGATGTTATGCAGGTTCCCAAAGGCTaGCCAGTACTCGTAGTACAGCAAGTAGAGGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: EKQGDVMQVPKG*PVLVVQQVEDP Trigger: CGGGTCCTCTACTTGCTGTACTACGAGTACTGGTCAGCCTTTGGGAACCTGCATAACATCTCCTTGCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS CCA 72 bp | ATGGTGACCATGATGACAATGTACAGCTTCGAAGAATaGGAGGCCCACGTGTTCTTCCGTATCTTCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: MVTMMTMYSFEE*EAHVFFRIFTT Trigger: GGTGGTGAAGATACGGAAGAACACGTGGGCCTCCCATTCTTCGAAGCTGTACATTGTCATCATGGTCACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS TCA 72 bp | TCCGAGAATGACTCTCTTCTCCGCTGTCAATACACATaGCATACTCCATGGTGGTCACCAAGCACGAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SENDSLLRCQYT*HTPWWSPSTKV Trigger: CACTTTCGTGCTTGGTGACCACCATGGAGTATGTCATGTGTATTGACAGCGGAGAAGAGAGTCATTCTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS CAA 90 bp | GGCCCGTGTTGTAGCCAAATAGAAAAGTCACCGATAATGTCACGATaGTGTAGTGATGGCCAGAAGAGAGTTCATAGTCTAAAGCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: GPCCSQIEKSPIMSR*CSDGQKRVHSLKHS Trigger: ACTATGCTTTAGACTATGAACTCTCTTCTGGCCATCACTACACAATCGTGACATTATCGGTGACTTTTCTATTTGGCTACAACACGGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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| CDS CAA 72 bp | TGTAGCCAAATAGAAAAGTCACCGATAATGTCACGATaGTGTAGTGATGGCCAGAAGAGAGTTCATAGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: CSQIEKSPIMSR*CSDGQKRVHSL Trigger: TAGACTATGAACTCTCTTCTGGCCATCACTACACAATCGTGACATTATCGGTGACTTTTCTATTTGGCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089015.10 ENSMUST00000161747.8 ENSMUST00000162333.8 ENSMUST00000165020.8 ENSMUST00000167152.8 ENSMUST00000233607.2 |
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