Pregenerated sensors for MARVELD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001672Ensembl transcript IDs: ENSMUST00000001722.14, ENSMUST00000051430.7
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGCTCCTGGGAGTCCCAGCCTCTACCACAGTCCATCATTGTTGCTaGTTATCTGCTTTGGAGACAGGGTCTTGCTATGCAGTCAGTGCA | + |
|
Preference number: 1 (lower is better) Translates to: LLLGVPASTTVHHCC*LSALETGSCYAVSA Trigger: TGCACTGACTGCATAGCAAGACCCTGTCTCCAAAGCAGATAATCAGCAACAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR TCA 90 bp | GATTCTTCATACAATGGCACATTTACGGGAGGTACAAATGCTTCCTaGGCGCTCCCAGGGGCCAGTAGAAGGGTTTCTTTGCAGCTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: DSSYNGTFTGGTNAS*ALPGASRRVSLQLS Trigger: GCTGAGCTGCAAAGAAACCCTTCTACTGGCCCCTGGGAGCGCTCAGGAAGCATTTGTACCTCCCGTAAATGTGCCATTGTATGAAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR GCA 90 bp | TCCAGGGCAATTGTTTCTGCCCCGATCATGAAGTATACTTTGCCTTaGTCCTGGGAGTCCCAGCCTCTACCACAGTCCATCATTGTTGCT | + |
|
Preference number: 1 (lower is better) Translates to: SRAIVSAPIMKYTLP*SWESQPLPQSIIVA Trigger: AGCAACAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACTTCATGATCGGGGCAGAAACAATTGCCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR GCA 90 bp | AAGTCTGTACCACCAAGCCCGGCTCCAGTGTTTGGCGTTTTGATATaGTGTTTGTCAGTTCCACATCCACAGAGGATTGCAGAAACCAGA | + |
|
Preference number: 1 (lower is better) Translates to: KSVPPSPAPVFGVLI*CLSVPHPQRIAETR Trigger: TCTGGTTTCTGCAATCCTCTGTGGATGTGGAACTGACAAACAGCATATCAAAACGCCAAACACTGGAGCCGGGCTTGGTGGTACAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CCA 90 bp | TCCCAGCCTCTACCACAGTCCATCATTGTTGCTGATTATCTGCTTTaGAGACAGGGTCTTGCTATGCAGTCAGTGCATGCTAGCCTTGAA | + |
|
Preference number: 1 (lower is better) Translates to: SQPLPQSIIVADYLL*RQGLAMQSVHASLE Trigger: TTCAAGGCTAGCATGCACTGACTGCATAGCAAGACCCTGTCTCCAAAGCAGATAATCAGCAACAATGATGGACTGTGGTAGAGGCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CCA 90 bp | AGGGGCTTCACATTCTTTTCCTTTGAGCAGATCCTGAACCAGCGGTaGGGTTGGATTCTTCATACAATGGCACATTTACGGGAGGTACAA | + |
|
Preference number: 1 (lower is better) Translates to: RGFTFFSFEQILNQR*GWILHTMAHLREVQ Trigger: TTGTACCTCCCGTAAATGTGCCATTGTATGAAGAATCCAACCCCACCGCTGGTTCAGGATCTGCTCAAAGGAAAAGAATGTGAAGCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR TCA 90 bp | CAGGGGCCAGTAGAAGGGTTTCTTTGCAGCTCAGCAAGTTTAATCTaGTTCTCTTTTCCTTACCACACACACACACACACACACGCTCAA | + |
|
Preference number: 1 (lower is better) Translates to: QGPVEGFLCSSASLI*FSFPYHTHTHTHAQ Trigger: TTGAGCGTGTGTGTGTGTGTGTGTGTGGTAAGGAAAAGAGAATCAGATTAAACTTGCTGAGCTGCAAAGAAACCCTTCTACTGGCCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR GCA 90 bp | CCATCATTGTTGCTGATTATCTGCTTTGGAGACAGGGTCTTGCTATaGAGTCAGTGCATGCTAGCCTTGAACTCAAGATTCTCCTGTCTC | + |
|
Preference number: 1 (lower is better) Translates to: PSLLLIICFGDRVLL*SQCMLALNSRFSCL Trigger: GAGACAGGAGAATCTTGAGTTCAAGGCTAGCATGCACTGACTGCATAGCAAGACCCTGTCTCCAAAGCAGATAATCAGCAACAATGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR GCA 90 bp | TTGCTGATTATCTGCTTTGGAGACAGGGTCTTGCTATGCAGTCAGTaGATGCTAGCCTTGAACTCAAGATTCTCCTGTCTCAGATTCAGT | + |
|
Preference number: 1 (lower is better) Translates to: LLIICFGDRVLLCSQ*MLALNSRFSCLRFS Trigger: ACTGAATCTGAGACAGGAGAATCTTGAGTTCAAGGCTAGCATGCACTGACTGCATAGCAAGACCCTGTCTCCAAAGCAGATAATCAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CCA 90 bp | TTCACATTCTTTTCCTTTGAGCAGATCCTGAACCAGCGGTGGGGTTaGATTCTTCATACAATGGCACATTTACGGGAGGTACAAATGCTT | + |
|
Preference number: 1 (lower is better) Translates to: FTFFSFEQILNQRWG*ILHTMAHLREVQML Trigger: AAGCATTTGTACCTCCCGTAAATGTGCCATTGTATGAAGAATCCAACCCCACCGCTGGTTCAGGATCTGCTCAAAGGAAAAGAATGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 90 bp | TGCCTTGCTCCTGGGAGTCCCAGCCTCTACCACAGTCCATCATTGTaGCTGATTATCTGCTTTGGAGACAGGGTCTTGCTATGCAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: CLAPGSPSLYHSPSL*LIICFGDRVLLCSQ Trigger: CTGACTGCATAGCAAGACCCTGTCTCCAAAGCAGATAATCAGCAACAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 90 bp | CTTTGCCTTGCTCCTGGGAGTCCCAGCCTCTACCACAGTCCATCATaGTTGCTGATTATCTGCTTTGGAGACAGGGTCTTGCTATGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LCLAPGSPSLYHSPS*LLIICFGDRVLLCS Trigger: ACTGCATAGCAAGACCCTGTCTCCAAAGCAGATAATCAGCAACAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 90 bp | TTCCAGGGCAATTGTTTCTGCCCCGATCATGAAGTATACTTTGCCTaGCTCCTGGGAGTCCCAGCCTCTACCACAGTCCATCATTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: FQGNCFCPDHEVYFA*LLGVPASTTVHHCC Trigger: GCAACAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACTTCATGATCGGGGCAGAAACAATTGCCCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR TCA 90 bp | CAATGGCACATTTACGGGAGGTACAAATGCTTCCTGAGCGCTCCCAGGGGCCAGCAGTGTTTGGCGTTTTaGTATGCTGTTTGTCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QWHIYGRYKCFLSAPRGQQCLAF*YAVCQF Trigger: GAACTGACAAACAGCATATCAAAACGCCAAACACTG...CTGGCCCCTGGGAGCGCTCAGGAAGCATTTGTACCTCCCGTAAATGTGCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGCGGTGGGGTTGGATTCTTCATACAATGGCACATTTACGGGAGGTACAAATTGGAGACAGGGTCTTaGTATGCAGTCAGTGCATGC | + |
|
Preference number: 2 (lower is better) Translates to: TSGGVGFFIQWHIYGRYKLETGS*YAVSAC Trigger: GCATGCACTGACTGCATAGCAAGACCCTGTCTCCAA...TTTGTACCTCCCGTAAATGTGCCATTGTATGAAGAATCCAACCCCACCGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGGGAAAGGGGCTTCACATTCTTTTCCTTTGAGCAGATCCTGAACCAGCGGTTTCTGCCCCGATCATaGAGTATACTTTGCCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CWERGFTFFSFEQILNQRFLPRS*SILCLA Trigger: AGCAAGGCAAAGTATACTTCATGATCGGGGCAGAAA...CCGCTGGTTCAGGATCTGCTCAAAGGAAAAGAATGTGAAGCCCCTTTCCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR GCA 90 bp | TGTTGGGAAAGGGGCTTCACATTCTTTTCCTTTGAGCAGATCCTGAACCAGCGGTTGCTATGCAGTCAGTaGATGCTAGCCTTGAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: CWERGFTFFSFEQILNQRLLCSQ*MLALNS Trigger: TGAGTTCAAGGCTAGCATGCACTGACTGCATAGCAA...CCGCTGGTTCAGGATCTGCTCAAAGGAAAAGAATGTGAAGCCCCTTTCCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 90 bp | CTGTTTGTCAGTTCCACATCCACAGAGGATTGCAGAAACCAGAGCTaGTTGTCACAGAGAATATTTACTGCTCCATGCAACCAGGAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LFVSSTSTEDCRNQS*LSQRIFTAPCNQEL Trigger: TAGCTCCTGGTTGCATGGAGCAGTAAATATTCTCTGTGACAACAAGCTCTGGTTTCTGCAATCCTCTGTGGATGTGGAACTGACAAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 90 bp | TGCTTTGGAGACAGGGTCTTGCTATGCAGTCAGTGCATGCTAGCCTaGAACTCAAGATTCTCCTGTCTCAGATTCAGTGCTAGGATTATA | + |
|
Preference number: 2 (lower is better) Translates to: CFGDRVLLCSQCMLA*NSRFSCLRFSARII Trigger: TATAATCCTAGCACTGAATCTGAGACAGGAGAATCTTGAGTTCAAGGCTAGCATGCACTGACTGCATAGCAAGACCCTGTCTCCAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 90 bp | TTTGTCAGTTCCACATCCACAGAGGATTGCAGAAACCAGAGCTTGTaGTCACAGAGAATATTTACTGCTCCATGCAACCAGGAGCTAACT | + |
|
Preference number: 2 (lower is better) Translates to: FVSSTSTEDCRNQSL*SQRIFTAPCNQELT Trigger: AGTTAGCTCCTGGTTGCATGGAGCAGTAAATATTCTCTGTGACAACAAGCTCTGGTTTCTGCAATCCTCTGTGGATGTGGAACTGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR GCA 90 bp | CGACACCGGTATACAGTTCTGTCCCTAAGACTGAAGTCTTCTACATCAGTCGATACAGAGAATATTTACTaGTCCATGCAACCAGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RHRYTVLSLRLKSSTSVDTENIY*SMQPGA Trigger: AGCTCCTGGTTGCATGGAGCAGTAAATATTCTCTGT...ATCGACTGATGTAGAAGACTTCAGTCTTAGGGACAGAACTGTATACCGGTGTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTCAGTTCCACATCCACAGAGGATTGCAGAAACCAGAGCTTGTTGTCACAGATATCCACACTGGCGTaGTATTTTGGAAGCATTCGT | + |
|
Preference number: 2 (lower is better) Translates to: FVSSTSTEDCRNQSLLSQISTLA*YFGSIR Trigger: ACGAATGCTTCCAAAATACCACGCCAGTGTGGATAT...CTGTGACAACAAGCTCTGGTTTCTGCAATCCTCTGTGGATGTGGAACTGACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR GCA 90 bp | CGACACCGGTATACAGTTCTGTCCCTAAGACTGAAGTCTTCTACATCAGTCGATGTAGAAGGGTTTCTTTaGAGCTCAGCAAGTTTAATC | + |
|
Preference number: 2 (lower is better) Translates to: RHRYTVLSLRLKSSTSVDVEGFL*SSASLI Trigger: GATTAAACTTGCTGAGCTGCAAAGAAACCCTTCTAC...ATCGACTGATGTAGAAGACTTCAGTCTTAGGGACAGAACTGTATACCGGTGTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR GCA 90 bp | GAATATACGGTGATGGTCCCAAGCCATAATTCAACAGGTAATCTAGCCCGTGAATTTGGCGTTTTGATATaGTGTTTGTCAGTTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: EYTVMVPSHNSTGNLAREFGVLI*CLSVPH Trigger: ATGTGGAACTGACAAACAGCATATCAAAACGCCAAA...TTCACGGGCTAGATTACCTGTTGAATTATGGCTTGGGACCATCACCGTATATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR GCA 90 bp | GTATACAGTTCTGTCCCTAAGACTGAAGTCTTCTACATCAGTCGATGGAGTTTAATATTTACTGCTCCATaGAACCAGGAGCTAACTAAG | + |
|
Preference number: 2 (lower is better) Translates to: VYSSVPKTEVFYISRWSLIFTAP*NQELTK Trigger: CTTAGTTAGCTCCTGGTTGCATGGAGCAGTAAATAT...TAAACTCCATCGACTGATGTAGAAGACTTCAGTCTTAGGGACAGAACTGTATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR CAA 90 bp | CAATGGCACATTTACGGGAGGTACAAATGCTTCCTGAGCGCTCCCAGGGGCCAGCAGTGCATGCTAGCCTaGAACTCAAGATTCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QWHIYGRYKCFLSAPRGQQCMLA*NSRFSC Trigger: ACAGGAGAATCTTGAGTTCAAGGCTAGCATGCACTG...CTGGCCCCTGGGAGCGCTCAGGAAGCATTTGTACCTCCCGTAAATGTGCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR TCA 72 bp | GTAGCTTTTCCAGGGCAATTGTTTCTGCCCCGATCATaGAGTATACTTTGCCTTGCTCCTGGGAGTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VAFPGQLFLPRS*SILCLAPGSPS Trigger: GCTGGGACTCCCAGGAGCAAGGCAAAGTATACTTCATGATCGGGGCAGAAACAATTGCCCTGGAAAAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR TCA 72 bp | TACAATGGCACATTTACGGGAGGTACAAATGCTTCCTaGGCGCTCCCAGGGGCCAGTAGAAGGGTTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: YNGTFTGGTNAS*ALPGASRRVSL Trigger: CAAAGAAACCCTTCTACTGGCCCCTGGGAGCGCTCAGGAAGCATTTGTACCTCCCGTAAATGTGCCATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR GCA 72 bp | CCACCAAGCCCGGCTCCAGTGTTTGGCGTTTTGATATaGTGTTTGTCAGTTCCACATCCACAGAGGATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PPSPAPVFGVLI*CLSVPHPQRIA Trigger: TGCAATCCTCTGTGGATGTGGAACTGACAAACAGCATATCAAAACGCCAAACACTGGAGCCGGGCTTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR GCA 72 bp | ATTGTTTCTGCCCCGATCATGAAGTATACTTTGCCTTaGTCCTGGGAGTCCCAGCCTCTACCACAGTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: IVSAPIMKYTLP*SWESQPLPQSI Trigger: GATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACTTCATGATCGGGGCAGAAACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CCA 72 bp | TCTGCCCCGATCATGAAGTATACTTTGCCTTGCTCCTaGGAGTCCCAGCCTCTACCACAGTCCATCATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SAPIMKYTLPCS*ESQPLPQSIIV Trigger: AACAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACTTCATGATCGGGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGGAAAGGGGCTTCACATTCTTTTCCTTTGAGCAGATCCTGAACCAGCGGTTTGGAGACAGGGTCTaGCTATGCAGTCAGTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: CWERGFTFFSFEQILNQRFGDRV*LCSQCM Trigger: CATGCACTGACTGCATAGCAAGACCCTGTCTCCAAA...CCGCTGGTTCAGGATCTGCTCAAAGGAAAAGAATGTGAAGCCCCTTTCCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CCA 72 bp | CAGGAGCTAACTAAGCCCGGCATATCCACACTGGCGTaGTATTTTGGAAGCATTCGTGAGTTCCACATCGAA | + |
|
Preference number: 3 (lower is better) Translates to: QELTKPGISTLA*YFGSIREFHIE Trigger: TTCGATGTGGAACTCACGAATGCTTCCAAAATACCACGCCAGTGTGGATATGCCGGGCTTAGTTAGCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR GCA 72 bp | CAGAGCTTGTTGTCACAGAGAATATTTACTGCTCCATaGAACCAGGAGCTAACTAAGCCCGGCATATCCACA | + |
|
Preference number: 3 (lower is better) Translates to: QSLLSQRIFTAP*NQELTKPGIST Trigger: TGTGGATATGCCGGGCTTAGTTAGCTCCTGGTTGCATGGAGCAGTAAATATTCTCTGTGACAACAAGCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CCA 72 bp | CTACCACAGTCCATCATTGTTGCTGATTATCTGCTTTaGAGACAGGGTCTTGCTATGCAGTCAGTGCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPQSIIVADYLL*RQGLAMQSVHA Trigger: AGCATGCACTGACTGCATAGCAAGACCCTGTCTCCAAAGCAGATAATCAGCAACAATGATGGACTGTGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CCA 72 bp | TTTTCCTTTGAGCAGATCCTGAACCAGCGGTGGGGTTaGATTCTTCATACAATGGCACATTTACGGGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: FSFEQILNQRWG*ILHTMAHLREV Trigger: TACCTCCCGTAAATGTGCCATTGTATGAAGAATCCAACCCCACCGCTGGTTCAGGATCTGCTCAAAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR CAA 90 bp | GATCATGAAGTATACTTTGCCTTGCTCCTGGGAGTCCCAGCCTCTACCACAGTCAGAAACCAGAGCTTGTaGTCACAGAGAATATTTACT | + |
|
Preference number: 3 (lower is better) Translates to: DHEVYFALLLGVPASTTVRNQSL*SQRIFT Trigger: AGTAAATATTCTCTGTGACAACAAGCTCTGGTTTCT...GACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACTTCATGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CCA 72 bp | ACATTCTTTTCCTTTGAGCAGATCCTGAACCAGCGGTaGGGTTGGATTCTTCATACAATGGCACATTTACGG | + |
|
Preference number: 3 (lower is better) Translates to: TFFSFEQILNQR*GWILHTMAHLR Trigger: CCGTAAATGTGCCATTGTATGAAGAATCCAACCCCACCGCTGGTTCAGGATCTGCTCAAAGGAAAAGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTACCACACACACACACACACACACGCTCAAACTTAAGTTTTTCTGGGGAAGTGTTTTGATATGCTGTTaGTCAGTTCCACATCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LTTHTHTHTLKLKFFWGSVLICC*SVPHPQ Trigger: CTGTGGATGTGGAACTGACAAACAGCATATCAAAAC...ACTTCCCCAGAAAAACTTAAGTTTGAGCGTGTGTGTGTGTGTGTGTGTGGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTACCACACACACACACACACACACGCTCAAACTTAAGTTTTTCTGGGGAAGTCACAGTCCATCATTGTaGCTGATTATCTGCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LTTHTHTHTLKLKFFWGSHSPSL*LIICFG Trigger: TCCAAAGCAGATAATCAGCAACAATGATGGACTGTG...ACTTCCCCAGAAAAACTTAAGTTTGAGCGTGTGTGTGTGTGTGTGTGTGGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR GCA 90 bp | GATCATGAAGTATACTTTGCCTTGCTCCTGGGAGTCCCAGCCTCTACCACAGTCCCGTTCCTCTCCCTGTaGCTGTCCCCGCCTCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DHEVYFALLLGVPASTTVPFLSL*LSPPRS Trigger: GGACCGAGGCGGGGACAGGCACAGGGAGAGGAACGG...GACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACTTCATGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR GCA 90 bp | GATCATGAAGTATACTTTGCCTTGCTCCTGGGAGTCCCAGCCTCTACCACAGTCTCCCGGAGTCGGGGCTaGGTCCCAACTGGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DHEVYFALLLGVPASTTVSRSRG*VPTGSP Trigger: TGGGGACCCAGTTGGGACGCAGCCCCGACTCCGGGA...GACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACTTCATGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR CCA 90 bp | CAGTTCCACATCCACAGAGGATTGCAGAAACCAGAGCTTGTTGTCACAGAGAATCGCGACCGCTCGACGTaGTGGTCTCGGTCCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QFHIHRGLQKPELVVTENRDRST*WSRSGC Trigger: GCACCCGGACCGAGACCACCACGTCGAGCGGTCGCG...ATTCTCTGTGACAACAAGCTCTGGTTTCTGCAATCCTCTGTGGATGTGGAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR CCA 90 bp | AGTATACTTTGCCTTGCTCCTGGGAGTCCCAGCCTCTACCACAGTCCATCATTGTGTTCGGATGCGCGATaGCCCGCGTCCCTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SILCLAPGSPSLYHSPSLCSDAR*PASLCL Trigger: CAGACACAGGGACGCGGGCCATCGCGCATCCGAACA...CAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR CCA 90 bp | CTTACCACACACACACACACACACACGCTCAAACTTAAGTTTTTCTGGGGAAGTCTTCTGCGACAGCTCTaGGGGCCCCCAGGGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTTHTHTHTLKLKFFWGSLLRQL*GPPGCG Trigger: CCCGCACCCTGGGGGCCCCCAGAGCTGTCGCAGAAG...ACTTCCCCAGAAAAACTTAAGTTTGAGCGTGTGTGTGTGTGTGTGTGTGGTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR GCA 90 bp | AGTATACTTTGCCTTGCTCCTGGGAGTCCCAGCCTCTACCACAGTCCATCATTGGGCTGCAAAGACTCCTaGTCCTATGTCTCCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SILCLAPGSPSLYHSPSLGCKDS*SYVSPM Trigger: CATGGGGGAGACATAGGAGCAGGAGTCTTTGCAGCC...CAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 72 bp | GCTCCTGGGAGTCCCAGCCTCTACCACAGTCCATCATaGTTGCTGATTATCTGCTTTGGAGACAGGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: APGSPSLYHSPS*LLIICFGDRVL Trigger: CAAGACCCTGTCTCCAAAGCAGATAATCAGCAACAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR CCA 90 bp | CAGTTCCACATCCACAGAGGATTGCAGAAACCAGAGCTTGTTGTCACAGAGAATAGAGCCTCCAGCATCTaGCAGCAGGCTCTCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFHIHRGLQKPELVVTENRASSI*QQALPV Trigger: CACAGGGAGAGCCTGCTGCCAGATGCTGGAGGCTCT...ATTCTCTGTGACAACAAGCTCTGGTTTCTGCAATCCTCTGTGGATGTGGAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR CCA 90 bp | TTGTCACAGAGAATATTTACTGCTCCATGCAACCAGGAGCTAACTAAGCCCGGCAGACCCCAATGGCCATaGCTGCAAAGACTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSQRIFTAPCNQELTKPGRPQWP*LQRLLL Trigger: GAGCAGGAGTCTTTGCAGCCATGGCCATTGGGGTCT...GCCGGGCTTAGTTAGCTCCTGGTTGCATGGAGCAGTAAATATTCTCTGTGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 72 bp | CCTGGGAGTCCCAGCCTCTACCACAGTCCATCATTGTaGCTGATTATCTGCTTTGGAGACAGGGTCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PGSPSLYHSPSL*LIICFGDRVLL Trigger: TAGCAAGACCCTGTCTCCAAAGCAGATAATCAGCAACAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR TCA 90 bp | TTGTCACAGAGAATATTTACTGCTCCATGCAACCAGGAGCTAACTAAGCCCGGCCATAGGCCCCAGCAATaGGTGCATCCATTAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQRIFTAPCNQELTKPGHRPQQ*VHPLSP Trigger: AGGGCTTAATGGATGCACTCATTGCTGGGGCCTATG...GCCGGGCTTAGTTAGCTCCTGGTTGCATGGAGCAGTAAATATTCTCTGTGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR TCA 90 bp | TTGTCACAGAGAATATTTACTGCTCCATGCAACCAGGAGCTAACTAAGCCCGGCCTCCTTGCACACATCTaGACTATAGGCGGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQRIFTAPCNQELTKPGLLAHI*TIGGRE Trigger: CTCTCTGCCGCCTATAGTTCAGATGTGTGCAAGGAG...GCCGGGCTTAGTTAGCTCCTGGTTGCATGGAGCAGTAAATATTCTCTGTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 72 bp | AGCCCGGCTCCAGTGTTTGGCGTTTTGATATGCTGTTaGTCAGTTCCACATCCACAGAGGATTGCAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SPAPVFGVLICC*SVPHPQRIAET Trigger: GGTTTCTGCAATCCTCTGTGGATGTGGAACTGACAAACAGCATATCAAAACGCCAAACACTGGAGCCGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 72 bp | AATTGTTTCTGCCCCGATCATGAAGTATACTTTGCCTaGCTCCTGGGAGTCCCAGCCTCTACCACAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NCFCPDHEVYFA*LLGVPASTTVH Trigger: ATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACTTCATGATCGGGGCAGAAACAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR GCA 90 bp | GTATACTTTGCCTTGCTCCTGGGAGTCCCAGCCTCTACCACAGTCCATCATTGTCTGTGCACAAGTATCTaGATTTGTGGCAATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VYFALLLGVPASTTVHHCLCTSI*ICGNPG Trigger: TCCTGGATTGCCACAAATGCAGATACTTGTGCACAG...ACAATGATGGACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR CCA 90 bp | TTTGTCAGTTCCACATCCACAGAGGATTGCAGAAACCAGAGCTTGTTGTCACAGCCTATGTCTCCCCCATaGACACCACAGTTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FVSSTSTEDCRNQSLLSQPMSPP*TPQLKP Trigger: TGGCTTCAACTGTGGTGTCCATGGGGGAGACATAGG...CTGTGACAACAAGCTCTGGTTTCTGCAATCCTCTGTGGATGTGGAACTGACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 72 bp | GACAGGGTCTTGCTATGCAGTCAGTGCATGCTAGCCTaGAACTCAAGATTCTCCTGTCTCAGATTCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DRVLLCSQCMLA*NSRFSCLRFSA Trigger: AGCACTGAATCTGAGACAGGAGAATCTTGAGTTCAAGGCTAGCATGCACTGACTGCATAGCAAGACCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR GCA 90 bp | TTGTCACAGAGAATATTTACTGCTCCATGCAACCAGGAGCTAACTAAGCCCGGCTGTAAGAGACAGAGCTaGAGGCCAAGATCAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQRIFTAPCNQELTKPGCKRQS*RPRSAS Trigger: ACTTGCTGATCTTGGCCTGCAGCTCTGTCTCTTACA...GCCGGGCTTAGTTAGCTCCTGGTTGCATGGAGCAGTAAATATTCTCTGTGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR GCA 90 bp | CGACACCGGTATACAGTTCTGTCCCTAAGACTGAAGTCTTCTACATCAGTCGATGGGTCTCCCTCTCCTTaGACACATCTGAACTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHRYTVLSLRLKSSTSVDGSPSP*THLNYR Trigger: CCTATAGTTCAGATGTGTGCAAGGAGAGGGAGACCC...ATCGACTGATGTAGAAGACTTCAGTCTTAGGGACAGAACTGTATACCGGTGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR CCA 90 bp | CTTACCACACACACACACACACACACGCTCAAACTTAAGTTTTTCTGGGGAAGTAAGTATCTGCATTTGTaGCAATCCAGGAGTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTTHTHTHTLKLKFFWGSKYLHL*QSRSPS Trigger: GGAGGGACTCCTGGATTGCCACAAATGCAGATACTT...ACTTCCCCAGAAAAACTTAAGTTTGAGCGTGTGTGTGTGTGTGTGTGTGGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR CCA 90 bp | TTGCTATGCAGTCAGTGCATGCTAGCCTTGAACTCAAGATTCTCCTGTCTCAGAACTCAAGCATTTCTGTaGGCTTCTCCTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSQCMLALNSRFSCLRTQAFL*ASPSAS Trigger: AGAAGCTGAAGGAGAAGCCCACAGAAATGCTTGAGT...TCTGAGACAGGAGAATCTTGAGTTCAAGGCTAGCATGCACTGACTGCATAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| 3UTR CAA 72 bp | TCCACATCCACAGAGGATTGCAGAAACCAGAGCTTGTaGTCACAGAGAATATTTACTGCTCCATGCAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: STSTEDCRNQSL*SQRIFTAPCNQ Trigger: CTGGTTGCATGGAGCAGTAAATATTCTCTGTGACAACAAGCTCTGGTTTCTGCAATCCTCTGTGGATGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR CCA 90 bp | GTATACAGTTCTGTCCCTAAGACTGAAGTCTTCTACATCAGTCGATGGAGTTTAGCGGCAGAGAGGTGTTaGAAGAAGAAGTACAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VYSSVPKTEVFYISRWSLAAERC*KKKYKP Trigger: AGGCTTGTACTTCTTCTTCCAACACCTCTCTGCCGC...TAAACTCCATCGACTGATGTAGAAGACTTCAGTCTTAGGGACAGAACTGTATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS GCA 90 bp | CCGCCTCGGTCCCGCGACCGCTCGACGTGGTGGTCTCGGTCCGGGTaGGGGCGCCGGTCCGGGTCTCTTTCTCTAGGACGGGTCCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPRSRDRSTWWSRSG*GRRSGSLSLGRVRG Trigger: GCCCCGGACCCGTCCTAGAGAAAGAGACCCGGACCGGCGCCCGCACCCGGACCGAGACCACCACGTCGAGCGGTCGCGGGACCGAGGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CCA 90 bp | CTCTCCCTGTGCCTGTCCCCGCCTCGGTCCCGCGACCGCTCGACGTaGTGGTCTCGGTCCGGGTGCGGGCGCCGGTCCGGGTCTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLCLSPPRSRDRST*WSRSGCGRRSGSLS Trigger: AGAAAGAGACCCGGACCGGCGCCCGCACCCGGACCGAGACCACCACGTCGAGCGGTCGCGGGACCGAGGCGGGGACAGGCACAGGGAGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CCA 90 bp | TCCCTGTGCCTGTCCCCGCCTCGGTCCCGCGACCGCTCGACGTGGTaGTCTCGGTCCGGGTGCGGGCGCCGGTCCGGGTCTCTTTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SLCLSPPRSRDRSTW*SRSGCGRRSGSLSL Trigger: TAGAGAAAGAGACCCGGACCGGCGCCCGCACCCGGACCGAGACCACCACGTCGAGCGGTCGCGGGACCGAGGCGGGGACAGGCACAGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CCA 90 bp | TGTTCGGATGCGCGATGGCCCGCGTCCCTGTGTCTGTCCTGGCGCTaGTCTCGGTCCGTTCTCTGTTCCCGGCCCGCCCGACGGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CSDARWPASLCLSWR*SRSVLCSRPARRSP Trigger: CGGGGACCGTCGGGCGGGCCGGGAACAGAGAACGGACCGAGACCAGCGCCAGGACAGACACAGGGACGCGGGCCATCGCGCATCCGAACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CCA 90 bp | GCTCTTTGTTCGGATGCGCGATGGCCCGCGTCCCTGTGTCTGTCCTaGCGCTGGTCTCGGTCCGTTCTCTGTTCCCGGCCCGCCCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: ALCSDARWPASLCLS*RWSRSVLCSRPARR Trigger: CCGTCGGGCGGGCCGGGAACAGAGAACGGACCGAGACCAGCGCCAGGACAGACACAGGGACGCGGGCCATCGCGCATCCGAACAAAGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS TCA 90 bp | GCTGCGTCCCAACTGGGTCCCCAGGGCTCGGGCCGCGCACGGCTTTaGCGGGACTTCTCCAAGGCTCTTTGTTCGGATGCGCGATGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AASQLGPQGSGRARL*RDFSKALCSDARWP Trigger: GGGCCATCGCGCATCCGAACAAAGAGCCTTGGAGAAGTCCCGTCAAAGCCGTGCGCGGCCCGAGCCCTGGGGACCCAGTTGGGACGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS GCA 90 bp | CCGCGCACGGCTTTGACGGGACTTCTCCAAGGCTCTTTGTTCGGATaGGCGATGGCCCGCGTCCCTGTGTCTGTCCTGGCGCTGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PRTALTGLLQGSLFG*AMARVPVSVLALVS Trigger: CGAGACCAGCGCCAGGACAGACACAGGGACGCGGGCCATCGCGCATCCGAACAAAGAGCCTTGGAGAAGTCCCGTCAAAGCCGTGCGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS TCA 90 bp | TGGCTGCTGCCCCATCGGTGCCCGCCAGCTGGCAGTTCATCCAGGTaGGGCCCTTGCGGGCGTAGACTCTTTCTCTGGTTTTGCAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: WLLPHRCPPAGSSSR*GPCGRRLFLWFCKC Trigger: ACACTTGCAAAACCAGAGAAAGAGTCTACGCCCGCAAGGGCCTCACCTGGATGAACTGCCAGCTGGCGGGCACCGATGGGGCAGCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS CCA 90 bp | TCACCACGCTGGCCGCGTATAAAATCACTAGAAGACAAGCGAAGGTaGCTGCTGCCCCATCGGTGCCCGCCAGCTGGCAGTTCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRWPRIKSLEDKRR*LLPHRCPPAGSSSR Trigger: CCTGGATGAACTGCCAGCTGGCGGGCACCGATGGGGCAGCAGCCACCTTCGCTTGTCTTCTAGTGATTTTATACGCGGCCAGCGTGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS GCA 90 bp | AGCAGCAGCCATCTCCTGGGCAGCTTCCTTAGACTCTTAGCTCCCTaGAGTAAAACGCCCATAGTGAGGACGCCCAGCCCCAGGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SSSHLLGSFLRLLAP*SKTPIVRTPSPRET Trigger: TGTCTCCCTGGGGCTGGGCGTCCTCACTATGGGCGTTTTACTGCAGGGAGCTAAGAGTCTAAGGAAGCTGCCCAGGAGATGGCTGCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS TCA 90 bp | CTGGTCCAGCTGCCGAACCTGCTCCAACTCGGTGCCCTCAAAAGGTaGGTAATAGTTATTTCCGAAGCCGCTGCCGCTGGCAAAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVQLPNLLQLGALKR*VIVISEAAAAGKAG Trigger: GCCAGCTTTGCCAGCGGCAGCGGCTTCGGAAATAACTATTACTCACCTTTTGAGGGCACCGAGTTGGAGCAGGTTCGGCAGCTGGACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS GCA 90 bp | AAAGGCCAGGACAGCTCCCACGGCAAAGACCCCAATGGCCATGGCTaGAAAGACTCCTGCTCCTATGTCTCCCCCATGGACACCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KGQDSSHGKDPNGHG*KDSCSYVSPMDTTV Trigger: AACTGTGGTGTCCATGGGGGAGACATAGGAGCAGGAGTCTTTGCAGCCATGGCCATTGGGGTCTTTGCCGTGGGAGCTGTCCTGGCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS GCA 90 bp | GGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCCAACTCGGTaGCCTCAAAAGGTGAGTAATAGTTATTTCCGAAGCCGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GSCTAGPAAEPAPTR*PQKVSNSYFRSRCR Trigger: GCGGCAGCGGCTTCGGAAATAACTATTACTCACCTTTTGAGGGCACCGAGTTGGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS CCA 90 bp | TGTAGTGCTTCTGTTCTCGGTAGGCCCGCAGGGCCATCACCACGCTaGCCGCGTATAAAATCACTAGAAGACAAGCGAAGGTGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSASVLGRPAGPSPR*PRIKSLEDKRRWLL Trigger: CAGCAGCCACCTTCGCTTGTCTTCTAGTGATTTTATACGCGGCCAGCGTGGTGATGGCCCTGCGGGCCTACCGAGAACAGAAGCACTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS TCA 90 bp | TGCGGGCGTAGACTCTTTCTCTGGTTTTGCAAGTGTCGGTGGAATTaGTGCGCAACGCCGCATACAGGTAAAAGCCAATGGCGACGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CGRRLFLWFCKCRWN*CATPHTGKSQWRRS Trigger: ACTGCGTCGCCATTGGCTTTTACCTGTATGCGGCGTTGCGCATCAATTCCACCGACACTTGCAAAACCAGAGAAAGAGTCTACGCCCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS-3UTR CAA 90 bp | GATCATGAAGTATACTTTGCCTTGCTCCTGGGAGTCCCAGCCTCTACCACAGTCGGCGGCAGAGAGGTGTaGGAAGAAGAAGTACAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DHEVYFALLLGVPASTTVGGREV*EEEVQA Trigger: GGCTTGTACTTCTTCTTCCAACACCTCTCTGCCGCC...GACTGTGGTAGAGGCTGGGACTCCCAGGAGCAAGGCAAAGTATACTTCATGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS GCA 90 bp | TCACCTCCATTATCTGCACCACACCTCTCCCTGTGCACAAGTATCTaGATTTGTGGCAATCCAGGAGTCCCTCCGCTTCCGACTGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPPLSAPHLSLCTSI*ICGNPGVPPLPTGN Trigger: ATTACCAGTCGGAAGCGGAGGGACTCCTGGATTGCCACAAATGCAGATACTTGTGCACAGGGAGAGGTGTGGTGCAGATAATGGAGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS TCA 90 bp | GGTGTTGGAAGAAGAAGTACAAGCCTGGAACATAGGCCCCAGCAATaGGTGCATCCATTAAGCCCTCAATCACCAGCCATAGTGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GVGRRSTSLEHRPQQ*VHPLSPQSPAIVDS Trigger: ACTGTCCACTATGGCTGGTGATTGAGGGCTTAATGGATGCACTCATTGCTGGGGCCTATGTTCCAGGCTTGTACTTCTTCTTCCAACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS-3UTR CAA 90 bp | CAGTTCCACATCCACAGAGGATTGCAGAAACCAGAGCTTGTTGTCACAGAGAATCACAAGTATCTGCATTaGTGGCAATCCAGGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QFHIHRGLQKPELVVTENHKYLH*WQSRSP Trigger: GGGACTCCTGGATTGCCACAAATGCAGATACTTGTG...ATTCTCTGTGACAACAAGCTCTGGTTTCTGCAATCCTCTGTGGATGTGGAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS CCA 72 bp | TGCCTGTCCCCGCCTCGGTCCCGCGACCGCTCGACGTaGTGGTCTCGGTCCGGGTGCGGGCGCCGGTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CLSPPRSRDRST*WSRSGCGRRSG Trigger: CCCGGACCGGCGCCCGCACCCGGACCGAGACCACCACGTCGAGCGGTCGCGGGACCGAGGCGGGGACAGGCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CCA 72 bp | CTGTCCCCGCCTCGGTCCCGCGACCGCTCGACGTGGTaGTCTCGGTCCGGGTGCGGGCGCCGGTCCGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSPPRSRDRSTW*SRSGCGRRSGS Trigger: AGACCCGGACCGGCGCCCGCACCCGGACCGAGACCACCACGTCGAGCGGTCGCGGGACCGAGGCGGGGACAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS GCA 72 bp | TCGCTCTCCAACCCGCGGCGCCCGAGGCCATGCTTCTaGGACAGCTCTGGGGGCCCCCAGGGTGCGGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLSNPRRPRPCF*DSSGGPQGAGP Trigger: GGGACCCGCACCCTGGGGGCCCCCAGAGCTGTCGCAGAAGCATGGCCTCGGGCGCCGCGGGTTGGAGAGCGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CCA 72 bp | GCGCGATGGCCCGCGTCCCTGTGTCTGTCCTGGCGCTaGTCTCGGTCCGTTCTCTGTTCCCGGCCCGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: ARWPASLCLSWR*SRSVLCSRPAR Trigger: TCGGGCGGGCCGGGAACAGAGAACGGACCGAGACCAGCGCCAGGACAGACACAGGGACGCGGGCCATCGCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CCA 72 bp | TCGGATGCGCGATGGCCCGCGTCCCTGTGTCTGTCCTaGCGCTGGTCTCGGTCCGTTCTCTGTTCCCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SDARWPASLCLS*RWSRSVLCSRP Trigger: GGGCCGGGAACAGAGAACGGACCGAGACCAGCGCCAGGACAGACACAGGGACGCGGGCCATCGCGCATCCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CAA 90 bp | GGGCTCGGGCCGCGCACGGCTTTGACGGGACTTCTCCAAGGCTCTTaGTTCGGATGCGCGATGGCCCGCGTCCCTGTGTCTGTCCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GLGPRTALTGLLQGS*FGCAMARVPVSVLA Trigger: CGCCAGGACAGACACAGGGACGCGGGCCATCGCGCATCCGAACAAAGAGCCTTGGAGAAGTCCCGTCAAAGCCGTGCGCGGCCCGAGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CAA 90 bp | GGCTGCGTCCCAACTGGGTCCCCAGGGCTCGGGCCGCGCACGGCTTaGACGGGACTTCTCCAAGGCTCTTTGTTCGGATGCGCGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GCVPTGSPGLGPRTA*TGLLQGSLFGCAMA Trigger: GGCCATCGCGCATCCGAACAAAGAGCCTTGGAGAAGTCCCGTCAAAGCCGTGCGCGGCCCGAGCCCTGGGGACCCAGTTGGGACGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CCA 72 bp | CGGGACTTCTCCAAGGCTCTTTGTTCGGATGCGCGATaGCCCGCGTCCCTGTGTCTGTCCTGGCGCTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RDFSKALCSDAR*PASLCLSWRWS Trigger: AGACCAGCGCCAGGACAGACACAGGGACGCGGGCCATCGCGCATCCGAACAAAGAGCCTTGGAGAAGTCCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS CAA 72 bp | CCGCGCACGGCTTTGACGGGACTTCTCCAAGGCTCTTaGTTCGGATGCGCGATGGCCCGCGTCCCTGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRTALTGLLQGS*FGCAMARVPVS Trigger: AGACACAGGGACGCGGGCCATCGCGCATCCGAACAAAGAGCCTTGGAGAAGTCCCGTCAAAGCCGTGCGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS GCA 72 bp | AGGGGCGACCGCAGGATCGTGTACTGCTGGTCCAGCTaGCGAACCTGCTCCAACTCGGTGCCCTCAAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGDRRIVYCWSS*RTCSNSVPSKG Trigger: ACCTTTTGAGGGCACCGAGTTGGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTGCGGTCGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS CCA 72 bp | TGGCCGCGTATAAAATCACTAGAAGACAAGCGAAGGTaGCTGCTGCCCCATCGGTGCCCGCCAGCTGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WPRIKSLEDKRR*LLPHRCPPAGS Trigger: ACTGCCAGCTGGCGGGCACCGATGGGGCAGCAGCCACCTTCGCTTGTCTTCTAGTGATTTTATACGCGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS GCA 72 bp | GCATCTGGCAGCAGGCTCTCCCTGTGCACAAGTATCTaGATTTGTGGCAATCCAGGAGTCCCTCCGCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ASGSRLSLCTSI*ICGNPGVPPLP Trigger: CGGAAGCGGAGGGACTCCTGGATTGCCACAAATGCAGATACTTGTGCACAGGGAGAGCCTGCTGCCAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS GCA 72 bp | GGAGAAGGTCATGAGGGCTCCGCTGTAGGCCATGGCTaGAGTGACCGTAGGCAGCTTGAGCTGGTAAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: GEGHEGSAVGHG*SDRRQLELVKL Trigger: CAGTTTTACCAGCTCAAGCTGCCTACGGTCACTGCAGCCATGGCCTACAGCGGAGCCCTCATGACCTTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS CAA 72 bp | TGGCAGCAGGCTCTCCCTGTGCACAAGTATCTGCATTaGTGGCAATCCAGGAGTCCCTCCGCTTCCGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: WQQALPVHKYLH*WQSRSPSASDW Trigger: CCAGTCGGAAGCGGAGGGACTCCTGGATTGCCACAAATGCAGATACTTGTGCACAGGGAGAGCCTGCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS TCA 72 bp | CTGCCGAACCTGCTCCAACTCGGTGCCCTCAAAAGGTaGGTAATAGTTATTTCCGAAGCCGCTGCCGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPNLLQLGALKR*VIVISEAAAAG Trigger: GCCAGCGGCAGCGGCTTCGGAAATAACTATTACTCACCTTTTGAGGGCACCGAGTTGGAGCAGGTTCGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS CCA 72 bp | TCTGTTCTCGGTAGGCCCGCAGGGCCATCACCACGCTaGCCGCGTATAAAATCACTAGAAGACAAGCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVLGRPAGPSPR*PRIKSLEDKRR Trigger: CCTTCGCTTGTCTTCTAGTGATTTTATACGCGGCCAGCGTGGTGATGGCCCTGCGGGCCTACCGAGAACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS CAA 72 bp | TGCACCACACCTCTCCCTGTGCACAAGTATCTGCATTaGTGGCAATCCAGGAGTCCCTCCGCTTCCGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: CTTPLPVHKYLH*WQSRSPSASDW Trigger: CCAGTCGGAAGCGGAGGGACTCCTGGATTGCCACAAATGCAGATACTTGTGCACAGGGAGAGGTGTGGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS CCA 72 bp | AATATTCCTCTTCCTGGAGAGCAGGCACGGAGTAGGTaGGCACGTATCTTTCCGAAGCCCGTTCGCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NIPLPGEQARSR*ARIFPKPVRSP Trigger: TGGAGAGCGAACGGGCTTCGGAAAGATACGTGCCCACCTACTCCGTGCCTGCTCTCCAGGAAGAGGAATATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001722.14 ENSMUST00000051430.7 |
||
| CDS GCA 72 bp | TTATCTGCACCACACCTCTCCCTGTGCACAAGTATCTaGATTTGTGGCAATCCAGGAGTCCCTCCGCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LSAPHLSLCTSI*ICGNPGVPPLP Trigger: CGGAAGCGGAGGGACTCCTGGATTGCCACAAATGCAGATACTTGTGCACAGGGAGAGGTGTGGTGCAGATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS TCA 72 bp | GCTCTGGTACAGGGTCTCCCTCTCCTTGCACACATCTaGACTATAGGCGGCAGAGAGGTGTTGGAAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ALVQGLPLLAHI*TIGGREVLEEE Trigger: TTCTTCTTCCAACACCTCTCTGCCGCCTATAGTTCAGATGTGTGCAAGGAGAGGGAGACCCTGTACCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS GCA 72 bp | ACTGCTGGTCCAGCTGCCGAACCTGCTCCAACTCGGTaGCCTCAAAAGGTGAGTAATAGTTATTTCCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TAGPAAEPAPTR*PQKVSNSYFRS Trigger: GCTTCGGAAATAACTATTACTCACCTTTTGAGGGCACCGAGTTGGAGCAGGTTCGGCAGCTGGACCAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS CAA 90 bp | CGTCCCGGACCACAGGTATTCTGGAACATCACGGTAATTTCTGTGTaGTTCCTGGCTGTCTTTGTAGTGCTTCTGTTCTCGGTAGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RPGPQVFWNITVISV*FLAVFVVLLFSVGP Trigger: CGGGCCTACCGAGAACAGAAGCACTACAAAGACAGCCAGGAACAACACAGAAATTACCGTGATGTTCCAGAATACCTGTGGTCCGGGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS TCA 72 bp | AGACTCTTTCTCTGGTTTTGCAAGTGTCGGTGGAATTaGTGCGCAACGCCGCATACAGGTAAAAGCCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: RLFLWFCKCRWN*CATPHTGKSQW Trigger: CCATTGGCTTTTACCTGTATGCGGCGTTGCGCATCAATTCCACCGACACTTGCAAAACCAGAGAAAGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||
| CDS TCA 72 bp | AGAAGAAGTACAAGCCTGGAACATAGGCCCCAGCAATaGGTGCATCCATTAAGCCCTCAATCACCAGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: RRSTSLEHRPQQ*VHPLSPQSPAI Trigger: TATGGCTGGTGATTGAGGGCTTAATGGATGCACTCATTGCTGGGGCCTATGTTCCAGGCTTGTACTTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051430.7 |
||
| CDS TCA 72 bp | ATCCGGCCAGGACAAAATAGGAAGCCACGATGCATATaGGAACCATGGCATTCAAAATCACCTCCATTATCT | + |
|
Preference number: 6 (lower is better) Translates to: IRPGQNRKPRCI*EPWHSKSPPLS Trigger: AGATAATGGAGGTGATTTTGAATGCCATGGTTCTCATATGCATCGTGGCTTCCTATTTTGTCCTGGCCGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001722.14 |
||